Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,418,505 |
A→G |
V39V (GTA→GTG) |
ydaS → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,418,505 | 0 | A | G | 100.0%
| 784.9
/ NA
| 245 | V39V (GTA→GTG) | ydaS | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (131/114); total (131/114) |
Only 100 of 253 total aligned reads displayed.
GCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACT > NC_000913/1418415‑1418593
|
gcaagcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCg > 2:4070835/1‑93 (MQ=255)
caagcTTGTGCTGTTGTCGGTGGGCAACCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGt > 2:1269438/1‑93 (MQ=255)
aagcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTc > 2:3324829/1‑93 (MQ=255)
aagcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTc > 1:1281952/1‑93 (MQ=255)
aagcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTc > 1:4811718/1‑93 (MQ=255)
agcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCa > 1:1639004/1‑93 (MQ=255)
agcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCa > 1:747765/1‑93 (MQ=255)
gcTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCaa < 2:541451/93‑1 (MQ=255)
ttGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAAtt < 1:4718850/93‑1 (MQ=255)
ttGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAAtt < 2:3991279/93‑1 (MQ=255)
ttGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGGCAAtt > 1:1706198/1‑93 (MQ=255)
tgCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcc < 1:916332/93‑1 (MQ=255)
gCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcct < 1:1530823/93‑1 (MQ=255)
gCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcct > 2:1394069/1‑93 (MQ=255)
gCTGTTGTCGGGGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgact > 2:5449744/1‑93 (MQ=255)
cTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctg > 2:1936672/1‑93 (MQ=255)
cTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctg < 1:4643543/93‑1 (MQ=255)
tgttgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctgc > 1:1682041/1‑93 (MQ=255)
gttgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctgcc < 2:3394367/93‑1 (MQ=255)
gttgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctgcc < 1:3878866/93‑1 (MQ=255)
gttgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctgcc > 1:6181666/1‑93 (MQ=255)
gttgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTAACACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATtgcctgcc > 1:3391774/1‑93 (MQ=255)
tgtCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCga < 1:1601562/93‑1 (MQ=255)
tCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCgaga < 1:2357880/93‑1 (MQ=255)
cGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCgagag < 2:838464/93‑1 (MQ=255)
gTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGAt > 1:3560784/1‑93 (MQ=255)
gTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGAt > 2:5218781/1‑93 (MQ=255)
gggCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGt < 1:4854305/93‑1 (MQ=255)
gCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTcc < 2:2133079/93‑1 (MQ=255)
gCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTcc > 2:3456312/1‑93 (MQ=255)
gCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTcc < 2:3636270/93‑1 (MQ=255)
aTCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGc > 2:2680995/1‑93 (MQ=255)
aTCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGc > 1:3761543/1‑93 (MQ=255)
tCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCa > 1:6144086/1‑93 (MQ=255)
aGCAATGGCTAGGCTTTTAGGGGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAAt > 2:881015/1‑93 (MQ=255)
cAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTg < 1:5618603/93‑1 (MQ=255)
tGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAAc < 2:4060251/93‑1 (MQ=255)
gCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGt < 2:3839879/93‑1 (MQ=255)
gCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGt > 2:2383396/1‑93 (MQ=255)
cTAGGCTTTTAGGTGTATCACCTCCAAGCGTTAATCAATGGATCAAAGGGGTGTGTCAATTGCCTGCCGAGATATGTCCAGCAATTGAAtgtg > 1:6295019/1‑93 (MQ=255)
cTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTg > 1:1895411/1‑93 (MQ=255)
tAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGc < 2:780368/93‑1 (MQ=255)
aGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGca > 2:3112068/1‑93 (MQ=255)
cTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGcaaca > 1:1041327/1‑93 (MQ=255)
cTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGcaaca > 1:2739480/1‑93 (MQ=255)
ttttAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGcaacaa < 1:3783113/93‑1 (MQ=255)
tttAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAag > 2:2443314/1‑93 (MQ=255)
tttAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAag < 1:5997475/93‑1 (MQ=255)
ttAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAaga < 1:2529688/93‑1 (MQ=255)
ttAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAaga < 1:4607104/93‑1 (MQ=255)
tAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAagag < 2:4418815/93‑1 (MQ=255)
aGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgagg < 1:4130585/93‑1 (MQ=255)
ggTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggt < 1:2625104/93‑1 (MQ=255)
ggTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggt < 1:4975998/93‑1 (MQ=255)
ggTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggt < 2:2664507/93‑1 (MQ=255)
gtgtATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggtg < 2:4890485/93‑1 (MQ=255)
gtgtATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggtg < 2:1838916/93‑1 (MQ=255)
gtATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggtgag < 1:3130051/93‑1 (MQ=255)
aTCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAgaggtgaggt > 1:226466/1‑93 (MQ=255)
tCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGtt < 1:3011501/93‑1 (MQ=255)
cTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCtgt > 2:234235/1‑93 (MQ=255)
cTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCtgt > 2:5588984/1‑93 (MQ=255)
ccAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGc > 2:4739288/1‑93 (MQ=255)
ccAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGc < 1:2108814/93‑1 (MQ=255)
aaGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCga < 1:476021/93‑1 (MQ=255)
aGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCgaa < 2:2972222/93‑1 (MQ=255)
aGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCgaa > 1:5127671/1‑93 (MQ=255)
gCGTAAATCAATGGATCAAAGGGGTGAGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCgaag > 2:1463218/1‑93 (MQ=255)
gTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCgaagaa > 2:1627394/1‑93 (MQ=255)
tAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAc < 2:2087454/93‑1 (MQ=255)
tAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAc < 1:2928798/93‑1 (MQ=255)
tAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAc < 1:1065313/93‑1 (MQ=255)
tAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATCGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAc > 1:5006698/1‑93 (MQ=255)
aaaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACt < 1:3511102/93‑1 (MQ=255)
aaaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACt > 1:423478/1‑93 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt < 2:5801207/93‑1 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt < 2:4772373/93‑1 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt > 2:3227830/1‑93 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt < 1:3925770/93‑1 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt > 2:3027213/1‑93 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt > 2:110229/1‑93 (MQ=255)
aaTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACtt < 2:1790790/93‑1 (MQ=255)
aTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTc > 1:4452535/1‑93 (MQ=255)
aTCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTc < 1:868428/93‑1 (MQ=255)
tCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCg > 1:382243/1‑93 (MQ=255)
aaTGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTc > 1:134641/1‑93 (MQ=255)
aTGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTcc < 1:4250523/93‑1 (MQ=255)
tGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCt > 1:5689697/1‑93 (MQ=255)
ggATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTg > 1:2349535/1‑93 (MQ=255)
gATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGa < 1:5314491/93‑1 (MQ=255)
tCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGata > 2:4242110/1‑93 (MQ=255)
tCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGata > 2:3737137/1‑93 (MQ=255)
cAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGatat > 1:5733435/1‑93 (MQ=255)
aaaGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATAtt < 2:4403883/93‑1 (MQ=255)
aaaGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATAtt > 1:3161642/1‑93 (MQ=255)
aaaGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTAATAtt > 2:5874277/1‑93 (MQ=255)
aaGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTg > 2:2883382/1‑93 (MQ=255)
aGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGa < 1:3341978/93‑1 (MQ=255)
gggTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACt < 1:554952/93‑1 (MQ=255)
gggTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACt > 2:656479/1‑93 (MQ=255)
|
GCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACT > NC_000913/1418415‑1418593
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTC > NC_000913/1418412‑1418597
|
CAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTG < SRR4302533.3739156/94‑1 (MQ=60)
CAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTG < SRR4302533.6039587/94‑1 (MQ=60)
AAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGC > SRR4302533.244607/1‑94 (MQ=60)
AAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGC < SRR4302533.621978/94‑1 (MQ=60)
AAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGATAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGC < SRR4302533.5357497/94‑1 (MQ=60)
AGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCG > SRR4302533.450872/1‑94 (MQ=60)
AGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCG < SRR4302533.3103751/94‑1 (MQ=60)
AGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCG > SRR4302533.6198688/1‑94 (MQ=60)
CAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTC > SRR4302533.4840880/1‑94 (MQ=60)
CAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTC > SRR4302533.1289667/1‑94 (MQ=60)
CAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTC > SRR4302533.5712990/1‑94 (MQ=60)
AAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCA > SRR4302533.4692534/1‑94 (MQ=60)
AAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCA > SRR4302533.752167/1‑94 (MQ=60)
AAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCA > SRR4302533.1648927/1‑94 (MQ=60)
AAGCTTGTGCTGTTGTCGGGGGGCAATCAGCAATGGCTAGGCTTTTAGGGGTATCACCTCCCAGCGTGAATCAATGGATCAAAGGGGTGCGTCA > SRR4302533.3270796/1‑94 (MQ=60)
AGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAA > SRR4302533.1702779/1‑94 (MQ=60)
AGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAA > SRR4302533.125012/1‑94 (MQ=60)
GCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAAT < SRR4302533.5187193/94‑1 (MQ=60)
GCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAAT < SRR4302533.1476908/94‑1 (MQ=60)
CTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGGCAATT > SRR4302533.1716533/1‑94 (MQ=60)
TTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTG < SRR4302533.4747464/94‑1 (MQ=60)
GTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCC > SRR4302533.4640743/1‑94 (MQ=60)
TGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCT < SRR4302533.921716/94‑1 (MQ=60)
TGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCT < SRR4302533.1482763/94‑1 (MQ=60)
TGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCT < SRR4302533.1666218/94‑1 (MQ=60)
GCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTG > SRR4302533.5559895/1‑94 (MQ=60)
GCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTG < SRR4302533.2316769/94‑1 (MQ=60)
GCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTG < SRR4302533.1540025/94‑1 (MQ=60)
CTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGC < SRR4302533.4671676/94‑1 (MQ=60)
CTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGC > SRR4302533.1692229/1‑94 (MQ=60)
TGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCC > SRR4302533.6218787/1‑94 (MQ=60)
TGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTAACACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCC > SRR4302533.3412720/1‑94 (MQ=60)
GTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCG < SRR4302533.3902536/94‑1 (MQ=60)
TGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAG < SRR4302533.1611258/94‑1 (MQ=60)
TCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAG < SRR4302533.2372455/94‑1 (MQ=60)
GGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGAT > SRR4302533.3582722/1‑94 (MQ=60)
GGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGAT > SRR4302533.898793/1‑94 (MQ=60)
GGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGAT > SRR4302533.5601556/1‑94 (MQ=60)
GGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTC < SRR4302533.4883724/94‑1 (MQ=60)
GGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCC > SRR4302533.317873/1‑94 (MQ=60)
GGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCC < SRR4302533.2354870/94‑1 (MQ=60)
GCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCA < SRR4302533.390242/94‑1 (MQ=60)
GCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCA > SRR4302533.2760157/1‑94 (MQ=60)
CAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAG > SRR4302533.4901366/1‑94 (MQ=60)
AATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGC > SRR4302533.4438688/1‑94 (MQ=60)
AATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGC > SRR4302533.1123566/1‑94 (MQ=60)
AATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGC > SRR4302533.3784599/1‑94 (MQ=60)
ATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCA > SRR4302533.6181081/1‑94 (MQ=60)
ATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCA > SRR4302533.2364139/1‑94 (MQ=60)
ATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCA < SRR4302533.5059034/94‑1 (MQ=60)
CAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCNTCAATTGCCTGCCGAGNGATGNCNANCAAT > SRR4302533.42025/1‑94 (MQ=60)
CAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAAT > SRR4302533.5141975/1‑94 (MQ=60)
AGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATT < SRR4302533.5743721/94‑1 (MQ=60)
AGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATT < SRR4302533.1339744/94‑1 (MQ=60)
GCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTG > SRR4302533.2963021/1‑94 (MQ=60)
CAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGA < SRR4302533.5652561/94‑1 (MQ=60)
AATGGCTAGGCTTTTAGGTGTATCGCCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAA < SRR4302533.3246752/94‑1 (MQ=60)
ATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAAC < SRR4302533.3948554/94‑1 (MQ=60)
ATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAAC < SRR4302533.2731220/94‑1 (MQ=60)
ATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAAC > SRR4302533.4780383/1‑94 (MQ=60)
TGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACG < SRR4302533.4494883/94‑1 (MQ=60)
TGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACG < SRR4302533.1067383/94‑1 (MQ=60)
GCTAGGCTTTTAGGTGTATCACCTCCAAGCGTTAATCAATGGATCAAAGGGGTGTGTCAATTGCCTGCCGAGATATGTCCAGCAATTGAATGTG > SRR4302533.6332552/1‑94 (MQ=60)
GCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTG > SRR4302533.3639329/1‑94 (MQ=60)
GCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTG > SRR4302533.1906980/1‑94 (MQ=60)
GCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTG < SRR4302533.5710011/94‑1 (MQ=60)
CTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGA > SRR4302533.3842873/1‑94 (MQ=60)
AGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAA < SRR4302533.827378/94‑1 (MQ=60)
GCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACA > SRR4302533.1047450/1‑94 (MQ=60)
GCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACA < SRR4302533.4262201/94‑1 (MQ=60)
GCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACA > SRR4302533.2756277/1‑94 (MQ=60)
CTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAA < SRR4302533.5014566/94‑1 (MQ=60)
CTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAA > SRR4302533.2421493/1‑94 (MQ=60)
TTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAG < SRR4302533.3806280/94‑1 (MQ=60)
TTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAG < SRR4302533.2377084/94‑1 (MQ=60)
TTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGA < SRR4302533.6033800/94‑1 (MQ=60)
TTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAG < SRR4302533.1916942/94‑1 (MQ=60)
TTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAG < SRR4302533.4635009/94‑1 (MQ=60)
TTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAG < SRR4302533.2545261/94‑1 (MQ=60)
TTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAG < SRR4302533.3749678/94‑1 (MQ=60)
TAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGG < SRR4302533.6044445/94‑1 (MQ=60)
AGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGT < SRR4302533.4155657/94‑1 (MQ=60)
AGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGT < SRR4302533.423794/94‑1 (MQ=60)
GGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTG < SRR4302533.2641212/94‑1 (MQ=60)
GGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTG < SRR4302533.5006171/94‑1 (MQ=60)
GGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTG > SRR4302533.3790164/1‑94 (MQ=60)
GTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGA < SRR4302533.4401009/94‑1 (MQ=60)
GTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGA < SRR4302533.3373266/94‑1 (MQ=60)
TGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAG < SRR4302533.6249958/94‑1 (MQ=60)
GTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGGGATGTCCAGCAATTGAACGTGCAACAATAGGTGAGG > SRR4302533.5542861/1‑94 (MQ=60)
GTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGG < SRR4302533.3149297/94‑1 (MQ=60)
TATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGT > SRR4302533.227877/1‑94 (MQ=60)
ATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACACGAGGTGAGGTT > SRR4302533.1723499/1‑94 (MQ=60)
TCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTC < SRR4302533.3029926/94‑1 (MQ=60)
ACCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTG > SRR4302533.632541/1‑94 (MQ=60)
CCTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGT < SRR4302533.5824874/94‑1 (MQ=60)
CTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTG < SRR4302533.4674832/94‑1 (MQ=60)
CTCCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTG > SRR4302533.1616514/1‑94 (MQ=60)
CCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCG < SRR4302533.2056657/94‑1 (MQ=60)
CCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCG < SRR4302533.2121822/94‑1 (MQ=60)
CCAAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCG < SRR4302533.3431912/94‑1 (MQ=60)
AAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAA > SRR4302533.5158648/1‑94 (MQ=60)
AAGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAA < SRR4302533.478862/94‑1 (MQ=60)
AGCGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAG > SRR4302533.836826/1‑94 (MQ=60)
CGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAA > SRR4302533.2791725/1‑94 (MQ=60)
CGTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAA > SRR4302533.2752819/1‑94 (MQ=60)
GTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAC > SRR4302533.4872212/1‑94 (MQ=60)
GTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAC < SRR4302533.2635246/94‑1 (MQ=60)
GTAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATCGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAAC > SRR4302533.5037037/1‑94 (MQ=60)
TAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACT < SRR4302533.1071569/94‑1 (MQ=60)
TAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACT < SRR4302533.2946714/94‑1 (MQ=60)
TAAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACT > SRR4302533.426011/1‑94 (MQ=60)
AAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGATCGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTT > SRR4302533.2191493/1‑94 (MQ=60)
AAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTT > SRR4302533.5935414/1‑94 (MQ=60)
AAATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTT < SRR4302533.3532745/94‑1 (MQ=60)
AATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTC > SRR4302533.4479455/1‑94 (MQ=60)
AATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTC < SRR4302533.3949740/94‑1 (MQ=60)
ATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCT > SRR4302533.479005/1‑94 (MQ=60)
ATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCG < SRR4302533.873517/94‑1 (MQ=60)
ATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCG < SRR4302533.3860607/94‑1 (MQ=60)
ATCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCG > SRR4302533.384548/1‑94 (MQ=60)
TCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGT < SRR4302533.3344592/94‑1 (MQ=60)
TCAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGT > SRR4302533.496474/1‑94 (MQ=60)
CAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTC > SRR4302533.135495/1‑94 (MQ=60)
CAATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTC > SRR4302533.657692/1‑94 (MQ=60)
ATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCT > SRR4302533.5724063/1‑94 (MQ=60)
ATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCT < SRR4302533.4276169/94‑1 (MQ=60)
ATGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCT < SRR4302533.6184331/94‑1 (MQ=60)
TGGATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTG > SRR4302533.2364070/1‑94 (MQ=60)
GATCAAAGGGGTGGGTCAATGGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGAT < SRR4302533.3047254/94‑1 (MQ=60)
GATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGAT < SRR4302533.3047255/94‑1 (MQ=60)
GATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGAT < SRR4302533.1713910/94‑1 (MQ=60)
GATCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGAT < SRR4302533.5346337/94‑1 (MQ=60)
TCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATAT > SRR4302533.5768050/1‑94 (MQ=60)
TCAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATAT > SRR4302533.3811534/1‑94 (MQ=60)
CAAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATT > SRR4302533.3181099/1‑94 (MQ=60)
AAAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTG > SRR4302533.3443523/1‑94 (MQ=60)
AAGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGA > SRR4302533.3555744/1‑94 (MQ=60)
AGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGAC > SRR4302533.160448/1‑94 (MQ=60)
AGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGAC < SRR4302533.1614496/94‑1 (MQ=60)
AGGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGAC < SRR4302533.3362634/94‑1 (MQ=60)
GGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACT > SRR4302533.4833734/1‑94 (MQ=60)
GGGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACT > SRR4302533.4080652/1‑94 (MQ=60)
GGGTGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTG < SRR4302533.558241/94‑1 (MQ=60)
GTGCGTCAATTGCCGGCCGAGAGATGTCCAGCAGTTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGT < SRR4302533.407360/94‑1 (MQ=60)
TGCGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTC < SRR4302533.2235938/94‑1 (MQ=60)
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CAAGCAAGCTTGTGCTGTTGTCGGTGGGCAATCAGCAATGGCTAGGCTTTTAGGTGTATCACCTCCAAGCGTAAATCAATGGATCAAAGGGGTACGTCAATTGCCTGCCGAGAGATGTCCAGCAATTGAACGTGCAACAAGAGGTGAGGTTCTGTGCGAAGAACTTCGTCCTGATATTGACTGGTC > NC_000913/1418412‑1418597
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
