Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,443,231 |
T→C |
N719N (AAT→AAC) |
ydbH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,443,231 | 0 | T | C | 100.0%
| 683.1
/ NA
| 212 | N719N (AAT→AAC) | ydbH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (103/109); total (103/109) |
Only 100 of 226 total aligned reads displayed.
TGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAA > NC_000913/1443141‑1443320
|
tGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAAcct > 1:458937/1‑93 (MQ=255)
tGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAAcct < 1:2136882/93‑1 (MQ=255)
gTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCa < 2:356449/93‑1 (MQ=255)
gTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCa > 1:5550927/1‑93 (MQ=255)
aGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATcc < 1:2424146/93‑1 (MQ=255)
gCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCa > 1:1086115/1‑93 (MQ=255)
gTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGc < 2:5406511/93‑1 (MQ=255)
gTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGc < 1:4017969/93‑1 (MQ=255)
tCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCg > 1:757000/1‑93 (MQ=255)
tCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCg > 2:5196226/1‑93 (MQ=255)
gATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGaa < 1:4690777/93‑1 (MQ=255)
gATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGaa > 2:4198856/1‑93 (MQ=255)
gATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGaa < 2:4824897/93‑1 (MQ=255)
aTGTGTTAGGCGTGAACTTACTGATGAAACAATGACGTATGCCGCAACATGTCCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAAc < 2:2558557/93‑1 (MQ=255)
aTGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAAc < 2:3504317/93‑1 (MQ=255)
aTGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAAc < 1:4248126/93‑1 (MQ=255)
tgtgTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACt > 2:4306758/1‑93 (MQ=255)
gtgtTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTg < 1:873003/93‑1 (MQ=255)
gtgtTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTg < 1:1332261/93‑1 (MQ=255)
gtgtTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTg < 1:4167745/93‑1 (MQ=255)
tAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTa < 2:2152729/93‑1 (MQ=255)
aGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAg < 1:615199/93‑1 (MQ=255)
gggTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAgcgc < 1:4850418/92‑1 (MQ=255)
cGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAgcgc < 1:3003857/93‑1 (MQ=255)
cGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGCCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAgcgc < 2:5072234/93‑1 (MQ=255)
ggTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGcc > 1:6299207/1‑93 (MQ=255)
gTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCg > 1:4767055/1‑93 (MQ=255)
tAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGt < 2:3838913/93‑1 (MQ=255)
tAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGt > 2:2319804/1‑93 (MQ=255)
aaCGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTc > 2:3460015/1‑93 (MQ=255)
aCGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCa < 1:4645842/93‑1 (MQ=255)
aCGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCATCa > 2:1737691/1‑93 (MQ=255)
cGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCaa < 1:6230677/93‑1 (MQ=255)
gTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAAt < 1:2070283/93‑1 (MQ=255)
aCTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATcc > 1:2001880/1‑93 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg > 2:2437410/1‑93 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg > 1:5388191/1‑93 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg < 2:5673329/93‑1 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg < 2:5550927/93‑1 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg > 2:1354240/1‑93 (MQ=255)
cTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCg < 1:3295624/93‑1 (MQ=255)
tgatgaAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGa > 2:4726640/1‑93 (MQ=255)
tgaAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAAc < 1:567867/93‑1 (MQ=255)
tgaAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAAc > 1:4107700/1‑93 (MQ=255)
gaAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACa > 2:4612827/1‑93 (MQ=255)
aaaCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACaa > 1:279983/1‑93 (MQ=255)
aaaCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACaa < 2:4899088/93‑1 (MQ=255)
aaCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAt < 1:529037/93‑1 (MQ=255)
aaCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAt < 1:2184449/93‑1 (MQ=255)
aaCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAt < 1:2615148/93‑1 (MQ=255)
aCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAtt < 1:1898115/93‑1 (MQ=255)
aCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAtt > 2:3735503/1‑93 (MQ=255)
aCAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAtt < 2:2075081/93‑1 (MQ=255)
cAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTc > 2:6034553/1‑93 (MQ=255)
aTTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGc < 2:1055044/93‑1 (MQ=255)
ttACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGcc > 2:1429844/1‑93 (MQ=255)
ttACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGcc < 2:220794/93‑1 (MQ=255)
tACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCa < 1:4549705/93‑1 (MQ=255)
tACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCa < 2:5977484/93‑1 (MQ=255)
aCGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCAt < 2:1520159/93‑1 (MQ=255)
aCGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCAt > 1:3698267/1‑93 (MQ=255)
aCGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCAt < 1:5693362/93‑1 (MQ=255)
cGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATg > 1:2571301/1‑93 (MQ=255)
gTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGt > 2:5506108/1‑93 (MQ=255)
gTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGGTAGCGCCGTCAATCCGGAACAATTCGCCATGt > 2:4438442/1‑93 (MQ=255)
tacgCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTc < 2:5962369/90‑1 (MQ=255)
tATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTc < 1:3222128/93‑1 (MQ=255)
tATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATACGAAACAATTCGCCATGTc > 2:3314417/1‑93 (MQ=255)
aTGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTcc > 2:2577721/1‑93 (MQ=255)
aTGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTcc < 1:2494750/93‑1 (MQ=255)
gctgaaCATGACCCGGCGGTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCggg < 1:5039400/89‑1 (MQ=255)
ccGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCggg < 2:130522/93‑1 (MQ=255)
cGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCgggg > 1:6193270/1‑93 (MQ=255)
cGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCgggg > 1:5241329/1‑93 (MQ=255)
cAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGCTAGCGACGTCAATCCGAAACAATTCGCCATGTCCGGGGCa > 1:2168023/1‑93 (MQ=255)
aaCATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCAt > 1:3568754/1‑93 (MQ=255)
aaCATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCAt < 2:4568029/93‑1 (MQ=255)
aTGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTa > 2:342346/1‑93 (MQ=255)
aTGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTa < 1:1526142/93‑1 (MQ=255)
tGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAg < 2:1774888/93‑1 (MQ=255)
gACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgt < 2:3969788/93‑1 (MQ=255)
aCCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtg > 2:5014820/1‑93 (MQ=255)
cccGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtgg > 2:618384/1‑93 (MQ=255)
cccGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtgg > 1:43958/1‑93 (MQ=255)
cGGCGCTGGTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAgtggtg > 2:6160098/1‑93 (MQ=255)
gcgcTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCa < 2:2641023/93‑1 (MQ=255)
cgcTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCAc < 1:310598/93‑1 (MQ=255)
cgcTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCAc > 2:301461/1‑93 (MQ=255)
cgcTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCAc < 2:2860692/93‑1 (MQ=255)
tgtgGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGc < 2:2765234/93‑1 (MQ=255)
tGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGt > 1:949763/1‑93 (MQ=255)
cGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTa < 1:3063927/93‑1 (MQ=255)
ggCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTAt < 1:4345599/93‑1 (MQ=255)
gCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATg < 2:2513740/93‑1 (MQ=255)
gCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATg < 1:1760165/93‑1 (MQ=255)
gCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATg < 2:6105667/93‑1 (MQ=255)
tGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGc < 1:5970176/93‑1 (MQ=255)
gAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCt < 2:731511/93‑1 (MQ=255)
aataacCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTg > 1:3942171/1‑93 (MQ=255)
taacCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGaa > 2:1566275/1‑93 (MQ=255)
|
TGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAA > NC_000913/1443141‑1443320
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAAT > NC_000913/1443140‑1443324
|
CTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCT > SRR4302533.3031060/1‑94 (MQ=60)
CTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCT > SRR4302533.461678/1‑94 (MQ=60)
TGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTC > SRR4302533.4322817/1‑94 (MQ=60)
TGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTC < SRR4302533.2150060/94‑1 (MQ=60)
TGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCA > SRR4302533.5584448/1‑94 (MQ=60)
AGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCA > SRR4302533.1092518/1‑94 (MQ=60)
AGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCA < SRR4302533.2439110/94‑1 (MQ=60)
AGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCA > SRR4302533.4543052/1‑94 (MQ=60)
GCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAG < SRR4302533.2516366/94‑1 (MQ=60)
GTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCG < SRR4302533.172457/94‑1 (MQ=60)
GTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCG > SRR4302533.761454/1‑94 (MQ=60)
GTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCG < SRR4302533.4042431/94‑1 (MQ=60)
GTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCG > SRR4302533.786205/1‑94 (MQ=60)
GTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCG > SRR4302533.4647699/1‑94 (MQ=60)
CGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAA > SRR4302533.539174/1‑94 (MQ=60)
GATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAAC > SRR4302533.4160557/1‑94 (MQ=60)
GATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAAC < SRR4302533.4719210/94‑1 (MQ=60)
ATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACT < SRR4302533.4273766/94‑1 (MQ=60)
TGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTG > SRR4302533.6315334/1‑94 (MQ=60)
TGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTG < SRR4302533.496271/94‑1 (MQ=60)
GTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGG < SRR4302533.4193002/94‑1 (MQ=60)
GTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGG < SRR4302533.878130/94‑1 (MQ=60)
GTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGG < SRR4302533.1340256/94‑1 (MQ=60)
GTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTT > SRR4302533.1226844/1‑94 (MQ=60)
TTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTA > SRR4302533.2196672/1‑94 (MQ=60)
TAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAG < SRR4302533.6260453/94‑1 (MQ=60)
AGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGC < SRR4302533.618813/94‑1 (MQ=60)
GGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCG < SRR4302533.3059453/94‑1 (MQ=60)
GGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCG < SRR4302533.69151/94‑1 (MQ=60)
GGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCC < SRR4302533.4879813/94‑1 (MQ=60)
CGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCC > SRR4302533.6336816/1‑94 (MQ=60)
CGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCC < SRR4302533.3022232/94‑1 (MQ=60)
GGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCG > SRR4302533.4795956/1‑94 (MQ=60)
GTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGT > SRR4302533.344517/1‑94 (MQ=60)
TAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTC > SRR4302533.4000255/1‑94 (MQ=60)
TAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTC < SRR4302533.2623559/94‑1 (MQ=60)
AACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCA > SRR4302533.1346711/1‑94 (MQ=60)
ACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAA < SRR4302533.4673997/94‑1 (MQ=60)
CGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAAT < SRR4302533.6267992/94‑1 (MQ=60)
CGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAAT > SRR4302533.1985823/1‑94 (MQ=60)
GTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATC < SRR4302533.2083033/94‑1 (MQ=60)
TACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCC < SRR4302533.293785/94‑1 (MQ=60)
TACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCC < SRR4302533.2130743/94‑1 (MQ=60)
TACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCC > SRR4302533.2014205/1‑94 (MQ=60)
ACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCG > SRR4302533.5420568/1‑94 (MQ=60)
ACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCG > SRR4302533.4217933/1‑94 (MQ=60)
CTGATGAAACAATTACGTATGCCGCAGCATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGA < SRR4302533.2158284/94‑1 (MQ=60)
CTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGA > SRR4302533.3242819/1‑94 (MQ=60)
CTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGA < SRR4302533.3315966/94‑1 (MQ=60)
TGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAA > SRR4302533.2151755/1‑94 (MQ=60)
ATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAAC > SRR4302533.4132674/1‑94 (MQ=60)
TGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACA < SRR4302533.571227/94‑1 (MQ=60)
TGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACA > SRR4302533.3602411/1‑94 (MQ=60)
GAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAA > SRR4302533.281691/1‑94 (MQ=60)
AAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAAT > SRR4302533.4737066/1‑94 (MQ=60)
AACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATT > SRR4302533.572213/1‑94 (MQ=60)
AACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATT < SRR4302533.532182/94‑1 (MQ=60)
AACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATT < SRR4302533.2631201/94‑1 (MQ=60)
AACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATT < SRR4302533.2197914/94‑1 (MQ=60)
ACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTC < SRR4302533.1909704/94‑1 (MQ=60)
CAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCG > SRR4302533.5474811/1‑94 (MQ=60)
CAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCG < SRR4302533.6226463/94‑1 (MQ=60)
AATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGC < SRR4302533.3871253/94‑1 (MQ=60)
AATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGC > SRR4302533.5502647/1‑94 (MQ=60)
ttatgcaccccacaacacgcCCCGGCTCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCA < SRR4302533.5055017/74‑1 (MQ=60)
TTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCA < SRR4302533.4132376/94‑1 (MQ=60)
TACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCAT > SRR4302533.3720981/1‑94 (MQ=60)
TACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCAT < SRR4302533.4577292/94‑1 (MQ=60)
ACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATG > SRR4302533.2587125/1‑94 (MQ=60)
ACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATG < SRR4302533.1817941/94‑1 (MQ=60)
ACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATG < SRR4302533.5727743/94‑1 (MQ=60)
ACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATG > SRR4302533.6067181/1‑94 (MQ=60)
CGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGT > SRR4302533.4046666/1‑94 (MQ=60)
CGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGGTAGCGCCGTCAATCCGGAACAATTCGCCATGT > SRR4302533.1047857/1‑94 (MQ=60)
TATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCC < SRR4302533.3241999/94‑1 (MQ=60)
ATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCG < SRR4302533.4317167/94‑1 (MQ=60)
ATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCG < SRR4302533.2510141/94‑1 (MQ=60)
GCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGG > SRR4302533.460709/1‑94 (MQ=60)
gctgAACATGACCCGGCGGTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGG < SRR4302533.5069910/90‑1 (MQ=60)
CCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGG > SRR4302533.5272836/1‑94 (MQ=60)
CCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGG > SRR4302533.6230435/1‑94 (MQ=60)
CCGCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGG < SRR4302533.5069909/94‑1 (MQ=60)
GCAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGCTAGCGACGTCAATCCGAAACAATTCGCCATGTCCGGGGCA > SRR4302533.2181357/1‑94 (MQ=60)
CAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCAT > SRR4302533.3590750/1‑94 (MQ=60)
CAACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATACAGCGACCTGGTTAGCGCCGTCAATCCTCAACAATTCGCCATGTCCGGTGCAT > SRR4302533.5830807/1‑94 (MQ=60)
ACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTT > SRR4302533.4804744/1‑94 (MQ=60)
ACATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTT > SRR4302533.3096408/1‑94 (MQ=60)
ATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAG < SRR4302533.1848882/94‑1 (MQ=60)
ATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAG < SRR4302533.1535327/94‑1 (MQ=60)
ATGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAG > SRR4302533.2209310/1‑94 (MQ=60)
TGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGT < SRR4302533.3486479/94‑1 (MQ=60)
TGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGT > SRR4302533.4699097/1‑94 (MQ=60)
AGACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGT < SRR4302533.6005716/94‑1 (MQ=60)
GACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTG < SRR4302533.731234/94‑1 (MQ=60)
ACCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGG > SRR4302533.44259/1‑94 (MQ=60)
CCCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGT > SRR4302533.2523827/1‑94 (MQ=60)
CCGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTG > SRR4302533.6145380/1‑94 (MQ=60)
CGGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGC > SRR4302533.4648290/1‑94 (MQ=60)
GGCGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGAATTTAGTGGTGCA > SRR4302533.2791773/1‑94 (MQ=60)
CGCTGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACT < SRR4302533.312498/94‑1 (MQ=60)
TGTTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCC > SRR4302533.5599268/1‑94 (MQ=60)
TTGCGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGT > SRR4302533.955339/1‑94 (MQ=60)
CGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTAT < SRR4302533.3082741/94‑1 (MQ=60)
CGGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTAT > SRR4302533.934848/1‑94 (MQ=60)
GGCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATG < SRR4302533.4371789/94‑1 (MQ=60)
GCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGG < SRR4302533.2462256/94‑1 (MQ=60)
GCTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGG < SRR4302533.1770891/94‑1 (MQ=60)
CTGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGC < SRR4302533.5275777/94‑1 (MQ=60)
TGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCT < SRR4302533.6006317/94‑1 (MQ=60)
TGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCT > SRR4302533.524731/1‑94 (MQ=60)
TGAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCT < SRR4302533.4418274/94‑1 (MQ=60)
GAATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTG > SRR4302533.3966224/1‑94 (MQ=60)
AATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGA < SRR4302533.3144656/94‑1 (MQ=60)
ATAACCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAA > SRR4302533.2032651/1‑94 (MQ=60)
CCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAAT < SRR4302533.2866054/94‑1 (MQ=60)
CCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAAT < SRR4302533.3000064/94‑1 (MQ=60)
CCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAAT < SRR4302533.4029385/94‑1 (MQ=60)
|
CTGATGTTAGCGTCGATGTGTTAGGCGGTAACGTACTGATGAAACAATTACGTATGCCGCAACATGACCCGGCGCTGTTGCGGCTGAATAATCTCTCATCCAGCGAACTGGTTAGCGCCGTCAATCCGAAACAATTCGCCATGTCCGGGGCATTTAGTGGTGCACTGCCGTTATGGCTGAACAAT > NC_000913/1443140‑1443324
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
