Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,510,481 |
C→T |
G268G (GGC→GGT) |
b1440 → |
putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,510,481 | 0 | C | T | 100.0%
| 768.0
/ NA
| 212 | G268G (GGC→GGT) | b1440 | putative transport protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (103/109); total (103/109) |
Only 100 of 218 total aligned reads displayed.
CACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTG > NC_000913/1510391‑1510570
|
cacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCa < 2:2769445/93‑1 (MQ=255)
cacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCa < 2:872948/93‑1 (MQ=255)
cacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCa < 1:726388/93‑1 (MQ=255)
cacTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCa < 2:5739029/93‑1 (MQ=255)
cTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGc < 2:4237053/93‑1 (MQ=255)
cTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGc > 1:629095/1‑93 (MQ=255)
tACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGcc > 2:1715470/1‑93 (MQ=255)
aCCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCt < 2:1621440/93‑1 (MQ=255)
ccGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTg < 1:5552706/93‑1 (MQ=255)
cGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGt > 1:1739188/1‑93 (MQ=255)
gTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGtt > 2:5448840/1‑93 (MQ=255)
gTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGtt > 2:2903007/1‑93 (MQ=255)
tGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTg < 1:3928775/93‑1 (MQ=255)
gCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGc > 1:2899433/1‑93 (MQ=255)
aaaTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTa > 2:1923237/1‑93 (MQ=255)
aaTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTAc < 1:2686265/93‑1 (MQ=255)
aTGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTAcc > 1:1072359/1‑93 (MQ=255)
tGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCg > 1:5701968/1‑93 (MQ=255)
tGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCg > 1:3840146/1‑93 (MQ=255)
gAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGt > 1:5447040/1‑93 (MQ=255)
aGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGtt < 2:109630/93‑1 (MQ=255)
gCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGttt < 2:2632683/93‑1 (MQ=255)
gATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTc < 2:2401384/93‑1 (MQ=255)
gATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTc < 1:3282242/93‑1 (MQ=255)
gATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTc > 2:606873/1‑93 (MQ=255)
aTTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTcc < 2:3379184/93‑1 (MQ=255)
tttCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTccc > 2:4994964/1‑93 (MQ=255)
ttCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCg > 2:502731/1‑93 (MQ=255)
cAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGaa < 1:2600608/93‑1 (MQ=255)
aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAag > 2:1796340/1‑93 (MQ=255)
aaaaaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAag < 2:6205614/93‑1 (MQ=255)
aaaaCGAGGTTGTCGTTGCTTCCAGTGCCTGACCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAagg < 2:4560168/93‑1 (MQ=255)
aaCGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAaggag < 1:1820775/93‑1 (MQ=255)
cGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAggg > 2:2548531/1‑93 (MQ=255)
gAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAgggg > 2:1443724/1‑92 (MQ=255)
aGGTTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGgtg < 1:4791474/93‑1 (MQ=255)
aGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAggggg > 2:917051/1‑91 (MQ=255)
aGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGgtg > 2:2318665/1‑93 (MQ=255)
ggTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGACGGAGGGTGtt > 2:724115/1‑93 (MQ=255)
gtgtGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTa > 2:1535705/1‑93 (MQ=255)
tgtgGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTAc < 1:139390/93‑1 (MQ=255)
gTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGt > 2:3326299/1‑93 (MQ=255)
gTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGGGTTACCGGt > 2:2266580/1‑93 (MQ=255)
ttGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGtt < 1:3811498/93‑1 (MQ=255)
ttGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGtt > 1:3330672/1‑93 (MQ=255)
tGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTg < 1:2844199/93‑1 (MQ=255)
gCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTgg > 2:3600835/1‑93 (MQ=255)
gCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTgg > 2:4692392/1‑93 (MQ=255)
gCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTgg > 2:300136/1‑93 (MQ=255)
gCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGCTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGCTgg > 1:3638222/1‑93 (MQ=255)
cTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGAGTTACCGGTTggg > 2:3193135/1‑93 (MQ=255)
ttCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGc < 2:4497233/93‑1 (MQ=255)
tCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCt > 1:4678943/1‑93 (MQ=255)
cAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGa > 1:4371461/1‑93 (MQ=255)
aGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGAt > 1:2200497/1‑93 (MQ=255)
gTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATa < 1:1495070/93‑1 (MQ=255)
gTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATa > 1:5248421/1‑93 (MQ=255)
tGCCTGGCTCTATCAGGCCAACGCCCTGAATGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCAAAGGAGGGTGTTACCGGTTGGGCTGATac < 2:672986/93‑1 (MQ=255)
tGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATac > 1:2072761/1‑93 (MQ=255)
gCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATacc < 1:6021254/93‑1 (MQ=255)
gCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATacc > 1:5843565/1‑93 (MQ=255)
cccTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATacc < 1:5319106/92‑1 (MQ=255)
tGGCCCTATCAGGCCAACGCCCTGAAAGCCTAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATaccacc > 2:1396092/1‑93 (MQ=255)
tGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATaccacc > 1:364884/1‑93 (MQ=255)
tGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATaccacc < 1:6209354/93‑1 (MQ=255)
ggCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATAccacca > 2:3786575/1‑93 (MQ=255)
cTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCAtgct > 2:5351799/1‑93 (MQ=255)
cTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGCGTTACCGGTTGGGCTGATACCACCAtgct > 1:4320831/1‑93 (MQ=255)
aTCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCAtgctgc > 1:2807733/1‑93 (MQ=255)
aGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATa < 1:1023650/93‑1 (MQ=255)
aGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATa > 1:858631/1‑93 (MQ=255)
gCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagc < 1:3449210/93‑1 (MQ=255)
gCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagc > 1:4957748/1‑93 (MQ=255)
ccAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcg > 1:507844/1‑93 (MQ=255)
ccAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcg < 1:5033524/93‑1 (MQ=255)
cAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcga < 1:3238979/93‑1 (MQ=255)
aaCGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGGGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaa > 2:5155554/1‑93 (MQ=255)
aCGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaag < 1:2954145/93‑1 (MQ=255)
aCGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaag > 2:5648212/1‑93 (MQ=255)
gCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaagcg < 2:2294371/93‑1 (MQ=255)
gCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaagcg > 2:2009299/1‑93 (MQ=255)
cccTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATagcgaagcga > 2:5537451/1‑93 (MQ=255)
ccTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAgcgaagcgaa > 1:3052573/1‑93 (MQ=255)
ccTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGGGTTACCGGTTGGGCTGATACCACCATGCTGCATAgcgaagcgaa > 2:580566/1‑93 (MQ=255)
cTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGaaa > 2:3838482/1‑93 (MQ=255)
cTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGaaa > 1:6021776/1‑93 (MQ=255)
gAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACa < 2:2163518/93‑1 (MQ=255)
aaGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATc < 1:2142406/93‑1 (MQ=255)
aaGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATc < 1:4773932/93‑1 (MQ=255)
aGCGGAAGGTCAGGCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACTGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATcc < 2:4386525/93‑1 (MQ=255)
aGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATcc < 2:4849232/93‑1 (MQ=255)
ctgAAGGTCTGCCTGTTGCTTCAGTTTTCCCGAAGGAGGGTGTTACGGGTTGGTCTGATACCACCATGCGGCATAGCGAAGCGAAATAGCCgg < 2:586816/91‑1 (MQ=255)
cGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGt > 1:4478317/1‑93 (MQ=255)
gAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGTCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGtt < 2:384972/93‑1 (MQ=255)
gAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGtt > 1:2307552/1‑93 (MQ=255)
gAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGtt < 2:2496572/93‑1 (MQ=255)
gAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGtt < 1:4237085/93‑1 (MQ=255)
gAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGtt > 2:2023100/1‑93 (MQ=255)
aGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTg < 1:4859336/93‑1 (MQ=255)
aGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTg < 2:3521790/93‑1 (MQ=255)
|
CACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTG > NC_000913/1510391‑1510570
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGC > NC_000913/1510388‑1510573
|
TGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGT > SRR4302533.5808168/1‑94 (MQ=60)
GACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTC > SRR4302533.5021754/1‑94 (MQ=60)
ACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCA < SRR4302533.2164232/94‑1 (MQ=60)
ACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCA < SRR4302533.5367930/94‑1 (MQ=60)
ACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCA < SRR4302533.4950809/94‑1 (MQ=60)
ACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCA < SRR4302533.410239/94‑1 (MQ=60)
ACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCA < SRR4302533.5876532/94‑1 (MQ=60)
CACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAG < SRR4302533.730678/94‑1 (MQ=60)
CACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAG < SRR4302533.4930155/94‑1 (MQ=60)
ACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGC > SRR4302533.632796/1‑94 (MQ=60)
CTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCC < SRR4302533.5474441/94‑1 (MQ=60)
TACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCT < SRR4302533.5287853/94‑1 (MQ=60)
CCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGT < SRR4302533.5586238/94‑1 (MQ=60)
CCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGT > SRR4302533.1749736/1‑94 (MQ=60)
CCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGT > SRR4302533.5380212/1‑94 (MQ=60)
TGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGC > SRR4302533.2917251/1‑94 (MQ=60)
TGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGC < SRR4302533.3952762/94‑1 (MQ=60)
TGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGC < SRR4302533.2184416/94‑1 (MQ=60)
AAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTAC > SRR4302533.6299982/1‑94 (MQ=60)
AAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTAC > SRR4302533.2226709/1‑94 (MQ=60)
AATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACC > SRR4302533.1078680/1‑94 (MQ=60)
AATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACC < SRR4302533.2702733/94‑1 (MQ=60)
ATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCG > SRR4302533.5736401/1‑94 (MQ=60)
ATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCG > SRR4302533.37471/1‑94 (MQ=60)
ATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCG > SRR4302533.3863606/1‑94 (MQ=60)
TGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGT < SRR4302533.6057746/94‑1 (MQ=60)
TGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGT > SRR4302533.5479855/1‑94 (MQ=60)
TGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGT > SRR4302533.3924900/1‑94 (MQ=60)
GAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTT > SRR4302533.3090322/1‑94 (MQ=60)
AGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTT > SRR4302533.2916728/1‑94 (MQ=60)
GCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTT < SRR4302533.1918168/94‑1 (MQ=60)
GATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCC < SRR4302533.3302506/94‑1 (MQ=60)
ATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCC > SRR4302533.6069010/1‑94 (MQ=60)
CAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAG < SRR4302533.4302893/94‑1 (MQ=60)
CAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAG < SRR4302533.2616587/94‑1 (MQ=60)
AAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAG < SRR4302533.4945004/94‑1 (MQ=60)
AACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGG < SRR4302533.1831897/94‑1 (MQ=60)
AACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGG < SRR4302533.2662929/94‑1 (MQ=60)
CGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCGGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGT < SRR4302533.4756967/94‑1 (MQ=60)
AGGTTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGT < SRR4302533.4820507/94‑1 (MQ=60)
GGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTT < SRR4302533.3577704/94‑1 (MQ=60)
GGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTA < SRR4302533.556127/94‑1 (MQ=60)
TGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACC < SRR4302533.140277/94‑1 (MQ=60)
TGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGG < SRR4302533.3662698/94‑1 (MQ=60)
TGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGG < SRR4302533.1529424/94‑1 (MQ=60)
GGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGT > SRR4302533.5901245/1‑94 (MQ=60)
GGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGT < SRR4302533.3342417/94‑1 (MQ=60)
GGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGT < SRR4302533.729001/94‑1 (MQ=60)
GTTGCTTCCAGTGCCTGGCTCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTT < SRR4302533.3290458/94‑1 (MQ=60)
GTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTT > SRR4302533.3351260/1‑94 (MQ=60)
GTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTT < SRR4302533.2615711/94‑1 (MQ=60)
TTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTG < SRR4302533.3968612/94‑1 (MQ=60)
TTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTG < SRR4302533.3834808/94‑1 (MQ=60)
GTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTG < SRR4302533.5189447/94‑1 (MQ=60)
TGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGG < SRR4302533.2861703/94‑1 (MQ=60)
TGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGG < SRR4302533.2861702/94‑1 (MQ=60)
TGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGG > SRR4302533.793519/1‑94 (MQ=60)
TGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGG < SRR4302533.4395217/94‑1 (MQ=60)
TGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGCTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGCTGG > SRR4302533.3660590/1‑94 (MQ=60)
CTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGC > SRR4302533.2144222/1‑94 (MQ=60)
CTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGC < SRR4302533.2947067/94‑1 (MQ=60)
TTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCT > SRR4302533.4707301/1‑94 (MQ=60)
TTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCT > SRR4302533.5012552/1‑94 (MQ=60)
TCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTG < SRR4302533.194487/94‑1 (MQ=60)
CCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGA > SRR4302533.4397851/1‑94 (MQ=60)
CCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGA > SRR4302533.4449473/1‑94 (MQ=60)
CAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGAT > SRR4302533.4380121/1‑94 (MQ=60)
CAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGAT > SRR4302533.2214054/1‑94 (MQ=60)
AGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATA < SRR4302533.1478055/94‑1 (MQ=60)
AGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATA > SRR4302533.5279970/1‑94 (MQ=60)
GTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATAC < SRR4302533.1504080/94‑1 (MQ=60)
GTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATAC > SRR4302533.2085528/1‑94 (MQ=60)
TGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACC > SRR4302533.5878896/1‑94 (MQ=60)
GCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCA < SRR4302533.6057741/94‑1 (MQ=60)
CCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCA < SRR4302533.5350983/94‑1 (MQ=60)
CCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCAC < SRR4302533.3754851/94‑1 (MQ=60)
CTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACC > SRR4302533.367097/1‑94 (MQ=60)
CTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACC > SRR4302533.2774819/1‑94 (MQ=60)
TGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCA < SRR4302533.6246596/94‑1 (MQ=60)
CCTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGCGTTACCGGTTGGGCTGATACCACCATGCT > SRR4302533.4346856/1‑94 (MQ=60)
CTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTG < SRR4302533.4809511/94‑1 (MQ=60)
CTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTG > SRR4302533.2724109/1‑94 (MQ=60)
CTATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTG > SRR4302533.5098495/1‑94 (MQ=60)
TATCAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGC > SRR4302533.2825011/1‑94 (MQ=60)
CAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATA < SRR4302533.5765401/94‑1 (MQ=60)
CAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATA > SRR4302533.863658/1‑94 (MQ=60)
CAGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATA > SRR4302533.3045196/1‑94 (MQ=60)
AGGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAG < SRR4302533.1029667/94‑1 (MQ=60)
GGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGC > SRR4302533.4987783/1‑94 (MQ=60)
GGCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGC > SRR4302533.1040127/1‑94 (MQ=60)
GCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCG > SRR4302533.510860/1‑94 (MQ=60)
GCCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCG < SRR4302533.3470505/94‑1 (MQ=60)
CCAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGA < SRR4302533.5064014/94‑1 (MQ=60)
CAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAA < SRR4302533.4608043/94‑1 (MQ=60)
CAACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAA < SRR4302533.3258942/94‑1 (MQ=60)
AACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAG < SRR4302533.1203361/94‑1 (MQ=60)
ACGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGC < SRR4302533.2972212/94‑1 (MQ=60)
CGCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCG < SRR4302533.1790901/94‑1 (MQ=60)
GCCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGA > SRR4302533.4847748/1‑94 (MQ=60)
CCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAA > SRR4302533.3071269/1‑94 (MQ=60)
CCCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAACGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAA > SRR4302533.3404806/1‑94 (MQ=60)
CCTGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAA > SRR4302533.6058269/1‑94 (MQ=60)
TGAAAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACA > SRR4302533.6153959/1‑94 (MQ=60)
AAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCC < SRR4302533.2155607/94‑1 (MQ=60)
AAGCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCC < SRR4302533.4802859/94‑1 (MQ=60)
GCCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGG < SRR4302533.3862991/94‑1 (MQ=60)
CCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGT > SRR4302533.3208988/1‑94 (MQ=60)
CCGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGT > SRR4302533.4505413/1‑94 (MQ=60)
CGAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTT > SRR4302533.2321846/1‑94 (MQ=60)
GAAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTT < SRR4302533.4262679/94‑1 (MQ=60)
AAGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTG < SRR4302533.5718139/94‑1 (MQ=60)
AGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGC > SRR4302533.1808042/1‑94 (MQ=60)
AGGTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGC < SRR4302533.4888791/94‑1 (MQ=60)
GTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGC > SRR4302533.2159720/1‑94 (MQ=60)
GTCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGC < SRR4302533.4245734/94‑1 (MQ=60)
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TGACACTACCGTGCAAATGAGCGATTTCAAAAACGAGGGTGTGGTTGCTTCCAGTGCCTGGCCCTATCAGGCCAACGCCCTGAAAGCCGAAGGCCAGCCTGTTGCTACCGTTTTCCCGAAGGAGGGTGTTACCGGTTGGGCTGATACCACCATGCTGCATAGCGAAGCGAAACATCCGGTTTGCGC > NC_000913/1510388‑1510573
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
