Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,555,388 |
G→A |
G225G (GGC→GGT) |
b1483 ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,555,388 | 0 | G | A | 99.5%
| 700.2
/ NA
| 196 | G225G (GGC→GGT) | b1483 | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (93/102); minor base C (0/1); total (93/103) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 205 total aligned reads displayed.
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATA > NC_000913/1555298‑1555477
|
tcctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCAccc < 2:732443/93‑1 (MQ=255)
ctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAg < 2:2417110/93‑1 (MQ=255)
ctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAg < 1:4360143/93‑1 (MQ=255)
ctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAg < 1:413092/93‑1 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTTCAAGTGCCGCCAGCACCTGCTGCGCCTCACCCAGt > 2:3113811/1‑93 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt > 1:987425/1‑93 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt > 1:6096374/1‑93 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt < 1:292351/93‑1 (MQ=255)
ccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGtt > 1:4492637/1‑93 (MQ=255)
cAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTc > 2:59014/1‑93 (MQ=255)
cAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTc < 2:1456782/93‑1 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCCGCACCTGCTGCGCGGCACCCAGctctc > 2:541381/1‑92 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGGGCGTCACCCAGGTCTa > 2:4660378/1‑93 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa > 1:2494369/1‑93 (MQ=255)
ggTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACa > 2:1500832/1‑93 (MQ=255)
ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATc > 2:934380/1‑93 (MQ=255)
tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt > 1:2242806/1‑93 (MQ=255)
tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt < 1:3848021/93‑1 (MQ=255)
tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt > 2:1853472/1‑93 (MQ=255)
aaTGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGccc < 1:6070356/93‑1 (MQ=255)
tGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCga > 1:3009699/1‑93 (MQ=255)
ggCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGACAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgag < 1:3385175/93‑1 (MQ=255)
cGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAt < 2:3794969/93‑1 (MQ=255)
ggggAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATa > 2:5517021/1‑93 (MQ=255)
gggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAc > 1:1730141/1‑93 (MQ=255)
ggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACa > 2:4784059/1‑93 (MQ=255)
gagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACAt < 1:1546811/93‑1 (MQ=255)
gggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCa > 1:6265211/1‑93 (MQ=255)
gggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCa > 1:4660495/1‑93 (MQ=255)
gaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCAcc < 1:5401106/93‑1 (MQ=255)
aTCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGc < 2:1586518/93‑1 (MQ=255)
ccAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCa > 1:322158/1‑93 (MQ=255)
ccAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCa > 2:5586189/1‑93 (MQ=255)
cAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAc > 2:3432846/1‑93 (MQ=255)
cAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAc > 1:4022756/1‑93 (MQ=255)
aGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAcc > 2:2301092/1‑93 (MQ=255)
aGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAcc < 1:2094121/93‑1 (MQ=255)
cAATAATCGGGTGTATGGATGCGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCg > 2:4011578/1‑93 (MQ=255)
ataatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGAt < 1:3076885/93‑1 (MQ=255)
ataatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGAt > 2:1038683/1‑93 (MQ=255)
ataatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGAt < 2:3727420/93‑1 (MQ=255)
taatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATc > 1:3245255/1‑93 (MQ=255)
taatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATc > 2:1089632/1‑93 (MQ=255)
taatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATc < 1:2506963/93‑1 (MQ=255)
taatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATc < 1:267690/93‑1 (MQ=255)
taatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGACCGAGATACATCACCGCCACCCGATc > 2:1314794/1‑93 (MQ=255)
atCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGc > 1:753776/1‑93 (MQ=255)
atCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGc > 2:4344989/1‑93 (MQ=255)
atCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGc < 2:2111172/93‑1 (MQ=255)
atCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGc > 1:1288910/1‑93 (MQ=255)
tCGGGTGTATGGCTGTGCAAGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAGCTGCCCGAGATACATCACCGCCACACGATCGcc > 2:4443853/1‑92 (MQ=37)
tCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCt > 1:1163075/1‑93 (MQ=255)
cGGGTGTATGGATGTGCAGGGGCCGTCAGCACATGCTGCGCGTCACCCAGTACTACAATCTGCACGAGATACATCACCGCCACCCGATCGCTc > 2:4158394/1‑93 (MQ=38)
gggTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCa < 1:1834494/93‑1 (MQ=255)
gttgtATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCCCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCat < 1:1796805/91‑1 (MQ=255)
gtgtATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCata > 1:5999901/1‑93 (MQ=255)
tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa < 2:5631688/93‑1 (MQ=255)
tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa < 2:6143639/93‑1 (MQ=255)
aTGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGAc > 2:3677067/1‑93 (MQ=255)
tGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGAct > 1:287757/1‑92 (MQ=255)
tGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACg > 2:864866/1‑93 (MQ=255)
tGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACg > 1:3490961/1‑93 (MQ=255)
ggATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGt < 2:1869164/93‑1 (MQ=255)
ggATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGt > 1:5138671/1‑93 (MQ=255)
aTGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAt > 1:4274311/1‑93 (MQ=255)
aTGTACAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACAACACCGCCACCCGATCGCTCATATGACGTAt < 2:167581/93‑1 (MQ=255)
tgtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATc < 2:3077261/93‑1 (MQ=255)
tgtgCAGCTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATc < 2:276382/93‑1 (MQ=255)
gtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCa > 1:870475/1‑93 (MQ=255)
tgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCAc < 1:2748211/93‑1 (MQ=255)
aGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga < 1:4550255/93‑1 (MQ=255)
aGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga < 2:2616465/93‑1 (MQ=255)
aGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga < 1:4785406/93‑1 (MQ=255)
ggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCcag > 2:2571836/1‑93 (MQ=255)
tGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAc < 1:2429050/93‑1 (MQ=255)
cGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAtt > 1:1944280/1‑93 (MQ=255)
tCAGCACCTGCTGGGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgt < 2:4999893/93‑1 (MQ=255)
tCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgt > 1:1039259/1‑93 (MQ=255)
tCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgt < 1:840730/93‑1 (MQ=255)
tCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgt > 2:4551119/1‑93 (MQ=255)
aGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgt < 1:1561269/93‑1 (MQ=255)
aGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgt < 1:666078/93‑1 (MQ=255)
aGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgt < 1:59014/93‑1 (MQ=255)
gCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgtg > 2:5089567/1‑93 (MQ=255)
gCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgtg > 1:231154/1‑93 (MQ=255)
gCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgtg < 2:3181889/93‑1 (MQ=255)
cACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGa < 2:3515468/93‑1 (MQ=255)
ccTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATTACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGaaa < 1:3615708/93‑1 (MQ=255)
ctgctgCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAt < 2:5565445/93‑1 (MQ=255)
ctgctgCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAt > 2:3341630/1‑93 (MQ=255)
tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc < 2:522218/93‑1 (MQ=255)
tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc < 2:2992092/93‑1 (MQ=255)
gctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCa < 1:1502979/93‑1 (MQ=255)
ctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAg > 1:3265497/1‑93 (MQ=255)
gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca < 2:580988/93‑1 (MQ=255)
gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca < 2:6222502/93‑1 (MQ=255)
cgcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcac < 1:5024793/93‑1 (MQ=255)
cgcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcac < 1:357889/93‑1 (MQ=255)
gcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca < 2:3260145/93‑1 (MQ=255)
cgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACAt < 2:6302570/93‑1 (MQ=255)
|
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATA > NC_000913/1555298‑1555477
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > NC_000913/1555295‑1555481
|
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCA > SRR4302533.685571/1‑94 (MQ=60)
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCA < SRR4302533.5121537/94‑1 (MQ=60)
TTCCTCCAGCGGTTTATCAATGGCGGGGGGGGGATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTCCTGCGCGTCACCC > SRR4302533.5561700/1‑94 (MQ=60)
TCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCA < SRR4302533.4530856/94‑1 (MQ=60)
TCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGGATGGATGTGCAGGGGCCGTCAGCACCTGCTGCGCGTCACCCA > SRR4302533.5595995/1‑94 (MQ=60)
CCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAG < SRR4302533.2597926/94‑1 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGGACCTGCTGCGCGTCACCCAGT > SRR4302533.4248681/1‑94 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGT > SRR4302533.993204/1‑94 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGT < SRR4302533.415573/94‑1 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGT < SRR4302533.4386462/94‑1 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGT > SRR4302533.5141318/1‑94 (MQ=60)
CTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGT > SRR4302533.6133199/1‑94 (MQ=60)
TCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTT < SRR4302533.294138/94‑1 (MQ=60)
TCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTT > SRR4302533.4519845/1‑94 (MQ=60)
TCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTT > SRR4302533.5944194/1‑94 (MQ=60)
CCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATAGGGAGTATGGATGTGAAGGTGCCGCTCGGACCTGCTGCGCGTCACCCCGTTC > SRR4302533.2570343/1‑94 (MQ=57)
AGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTA > SRR4302533.2509757/1‑94 (MQ=60)
AGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTA > SRR4302533.2279699/1‑94 (MQ=60)
cgtgTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACA < SRR4302533.2106923/90‑1 (MQ=60)
GGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAA < SRR4302533.1198452/94‑1 (MQ=60)
GGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAA > SRR4302533.1606604/1‑94 (MQ=60)
TTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTCAAATCT > SRR4302533.1516328/1‑94 (MQ=60)
TTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCT < SRR4302533.6311649/94‑1 (MQ=60)
TTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCT > SRR4302533.2256669/1‑94 (MQ=60)
TATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTG < SRR4302533.3871518/94‑1 (MQ=60)
CAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCC < SRR4302533.2926222/94‑1 (MQ=60)
CAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTACCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCC > SRR4302533.1302405/1‑94 (MQ=60)
AATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCG < SRR4302533.6107084/94‑1 (MQ=60)
ATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGA > SRR4302533.3028116/1‑94 (MQ=60)
ATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGA > SRR4302533.3495221/1‑94 (MQ=60)
ATGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGTACCTGCTGCGCGTCACCCAGTTCTAAAATCTGCCCGA > SRR4302533.6027830/1‑94 (MQ=60)
TGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAG < SRR4302533.2187526/94‑1 (MQ=60)
TGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAG > SRR4302533.2838598/1‑94 (MQ=60)
GGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGACAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGA < SRR4302533.3406075/94‑1 (MQ=60)
GCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAT < SRR4302533.6257937/94‑1 (MQ=60)
GGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAC > SRR4302533.1740631/1‑94 (MQ=60)
GGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACA > SRR4302533.784444/1‑94 (MQ=60)
GAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATC < SRR4302533.1556132/94‑1 (MQ=60)
GAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATC < SRR4302533.2448255/94‑1 (MQ=60)
GAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATC > SRR4302533.2436108/1‑94 (MQ=60)
AGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCA > SRR4302533.6302653/1‑94 (MQ=60)
AGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCA > SRR4302533.4688738/1‑94 (MQ=60)
GGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACC < SRR4302533.2991857/94‑1 (MQ=60)
GAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCG < SRR4302533.5433563/94‑1 (MQ=60)
GAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCAACTGCTGCGCGTCACCCAGTTCTACACTCTGCCCGAGATACATCAGCG > SRR4302533.3775732/1‑94 (MQ=60)
ATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCC < SRR4302533.1832514/94‑1 (MQ=60)
TCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCA > SRR4302533.1942935/1‑94 (MQ=60)
TCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCA > SRR4302533.324126/1‑94 (MQ=60)
TCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCA < SRR4302533.3257798/94‑1 (MQ=60)
CCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAC > SRR4302533.4047250/1‑94 (MQ=60)
CAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACC > SRR4302533.5355555/1‑94 (MQ=60)
AGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCC < SRR4302533.2107018/94‑1 (MQ=60)
AGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCC < SRR4302533.2946794/94‑1 (MQ=60)
AGCAATAATCGGGTGTATGGATGTGCAGCCGACGTCAGCACCTGCTGAGCGTCTCCCAGTTCTACAATCTGCGCGAGATACATCACCGCCACCC > SRR4302533.3290548/1‑94 (MQ=60)
ATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATC > SRR4302533.3265260/1‑94 (MQ=60)
ATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATC > SRR4302533.5221844/1‑94 (MQ=60)
ATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATC < SRR4302533.3095768/94‑1 (MQ=60)
ATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATC > SRR4302533.502439/1‑94 (MQ=60)
TAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCG < SRR4302533.269317/94‑1 (MQ=60)
TAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCG < SRR4302533.2522416/94‑1 (MQ=60)
AATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGC > SRR4302533.1296668/1‑94 (MQ=60)
AATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGC > SRR4302533.758214/1‑94 (MQ=60)
ATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCT > SRR4302533.1170051/1‑94 (MQ=60)
GGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCAT < SRR4302533.1845690/94‑1 (MQ=60)
GGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCAT < SRR4302533.3372091/94‑1 (MQ=60)
GTTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCCCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATA < SRR4302533.1807739/94‑1 (MQ=60)
GGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATA > SRR4302533.6036245/1‑94 (MQ=60)
TGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATG > SRR4302533.3282563/1‑94 (MQ=60)
TGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATG < SRR4302533.4382808/94‑1 (MQ=60)
ATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACT > SRR4302533.289516/1‑94 (MQ=60)
ATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACG > SRR4302533.3512492/1‑94 (MQ=60)
TGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGT > SRR4302533.5169724/1‑94 (MQ=60)
GGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTA > SRR4302533.1789456/1‑94 (MQ=60)
GGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTA > SRR4302533.1556570/1‑94 (MQ=60)
GATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAT > SRR4302533.4300027/1‑94 (MQ=60)
GTGTGCAGGTGCCGTCAGCCCCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCCCCGCCACCCGATCGCTCATATGACGTATC < SRR4302533.1238952/94‑1 (MQ=60)
TGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCA > SRR4302533.875584/1‑94 (MQ=60)
TGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCA < SRR4302533.4788524/94‑1 (MQ=60)
TGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCA < SRR4302533.852567/94‑1 (MQ=60)
TGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACC < SRR4302533.2765059/94‑1 (MQ=60)
TGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACC < SRR4302533.691656/94‑1 (MQ=60)
GCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCG > SRR4302533.3236687/1‑94 (MQ=60)
GCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCG > SRR4302533.4091747/1‑94 (MQ=60)
AGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAG < SRR4302533.4814388/94‑1 (MQ=60)
AGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAG < SRR4302533.4577847/94‑1 (MQ=60)
GTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAC < SRR4302533.1145566/94‑1 (MQ=60)
GTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAC > SRR4302533.4404770/1‑94 (MQ=60)
GTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAC < SRR4302533.3603115/94‑1 (MQ=60)
GTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAC < SRR4302533.4667218/94‑1 (MQ=60)
TGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACA < SRR4302533.2444066/94‑1 (MQ=60)
CCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATT > SRR4302533.1956139/1‑94 (MQ=60)
GTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGT > SRR4302533.1045368/1‑94 (MQ=60)
GTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGT > SRR4302533.6117896/1‑94 (MQ=60)
GTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGT > SRR4302533.6048670/1‑94 (MQ=60)
TCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTG < SRR4302533.845648/94‑1 (MQ=60)
AGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG < SRR4302533.59402/94‑1 (MQ=60)
AGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG < SRR4302533.1570671/94‑1 (MQ=60)
AGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG > SRR4302533.232585/1‑94 (MQ=60)
AGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG < SRR4302533.670013/94‑1 (MQ=60)
CACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAA > SRR4302533.2705462/1‑94 (MQ=60)
CCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATTACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAT < SRR4302533.3637952/94‑1 (MQ=60)
CCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAT < SRR4302533.3873875/94‑1 (MQ=60)
GCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAG < SRR4302533.2513062/94‑1 (MQ=60)
GCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAG > SRR4302533.3285648/1‑94 (MQ=60)
GCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAG < SRR4302533.1512043/94‑1 (MQ=60)
TGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCA > SRR4302533.966624/1‑94 (MQ=60)
GCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCAC < SRR4302533.3036391/94‑1 (MQ=60)
CGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA < SRR4302533.360069/94‑1 (MQ=60)
CGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA < SRR4302533.5055219/94‑1 (MQ=60)
CGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATA < SRR4302533.3530684/94‑1 (MQ=60)
ACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > SRR4302533.3240448/1‑94 (MQ=60)
ACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > SRR4302533.5521142/1‑94 (MQ=60)
ACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > SRR4302533.5059652/1‑94 (MQ=60)
|
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > NC_000913/1555295‑1555481
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
