Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,555,388 |
G→A |
G225G (GGC→GGT) |
b1483 ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,555,388 | 0 | G | A | 91.0%
| 573.9
/ 25.8
| 201 | G225G (GGC→GGT) | b1483 | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (14/4); new base A (86/97); total (100/101) |
| Fisher's exact test for biased strand distribution p-value = 1.40e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.37e-01 |
Only 100 of 215 total aligned reads displayed.
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGT > NC_000913/1555298‑1555480
|
tcctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGccc > 1:8783971/1‑93 (MQ=255)
cctccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGGATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGGCccccg > 1:5840708/1‑92 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt < 2:4915331/93‑1 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGt > 2:2193544/1‑93 (MQ=255)
tccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCAACTGCTGCGCCTCACCCAGt > 2:2377462/1‑93 (MQ=255)
ccAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGtt > 1:2547646/1‑93 (MQ=255)
aGCGGTTTATCAATGGCGGGGAGTGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCt < 1:6444565/93‑1 (MQ=255)
aGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCt < 2:4966199/93‑1 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa > 2:3428181/1‑93 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa < 2:3205665/93‑1 (MQ=255)
gCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTa > 1:6951973/1‑93 (MQ=255)
cGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTAc < 1:6261548/93‑1 (MQ=255)
ggTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGGCCCGTTCTACa > 2:6032363/1‑93 (MQ=255)
gTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACaa > 1:7453816/1‑93 (MQ=255)
tttATCAATGGCGGGGAGGGAATCCAGCAATAATTGGGCGTATGGATGTGCAGGGGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAt > 1:7758986/1‑93 (MQ=255)
tttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAt < 1:858806/93‑1 (MQ=255)
ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATc > 2:9454682/1‑93 (MQ=255)
ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATc > 1:9877844/1‑93 (MQ=255)
ttATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATc < 1:3303017/93‑1 (MQ=255)
tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt > 1:967598/1‑93 (MQ=255)
tATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCt < 1:1616726/93‑1 (MQ=255)
ctCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTg < 1:5512220/92‑1 (MQ=255)
tCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGGGCTGGCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGc > 1:6489663/1‑93 (MQ=255)
tGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCga < 2:7943456/93‑1 (MQ=255)
ggCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgag < 2:3584447/93‑1 (MQ=255)
gCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgaga < 2:1091797/93‑1 (MQ=255)
gCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCgaga < 2:8582438/93‑1 (MQ=255)
gggggAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAt < 2:9772882/92‑1 (MQ=255)
cGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGAt < 2:9326885/93‑1 (MQ=255)
gggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAc < 1:3796646/93‑1 (MQ=255)
ggagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACa < 1:5096416/93‑1 (MQ=255)
gagggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCAACTGCTGCGCGGGACCCAGTTCTACAATCTGCCGGAGATACAt > 2:4511183/1‑93 (MQ=255)
ggggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc < 1:5228488/92‑1 (MQ=255)
agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc > 2:1208074/1‑93 (MQ=255)
agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc < 2:7340893/93‑1 (MQ=255)
agggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATc < 1:7829167/93‑1 (MQ=255)
gggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCa > 2:5347467/1‑93 (MQ=255)
gggaATCCAGCAATAAGCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCa < 2:1913654/93‑1 (MQ=255)
ggaATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCAc > 1:437545/1‑93 (MQ=255)
aaTCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCg > 2:5645598/1‑93 (MQ=255)
tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc > 1:7091681/1‑93 (MQ=255)
tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc > 2:5719498/1‑93 (MQ=255)
tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTGCTACAATCTGCCCGAGATACATCACCGcc < 2:4873253/93‑1 (MQ=255)
tCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGcc > 2:7882250/1‑93 (MQ=255)
cAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCAc > 2:4888854/1‑93 (MQ=255)
aataatCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGa < 1:7171053/93‑1 (MQ=255)
ggTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCat > 1:128453/1‑93 (MQ=255)
gtgtATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCata < 2:9602761/93‑1 (MQ=255)
tttATGGATGGGCAGGTGCCGTCAGCACCTGCTGCGCTTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCatat > 2:4160872/3‑93 (MQ=38)
tgtATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCatat > 1:1184912/1‑93 (MQ=255)
tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCTCTCATATGa < 1:7648964/93‑1 (MQ=255)
tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa > 2:4619531/1‑93 (MQ=255)
tATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGa > 2:6170053/1‑93 (MQ=255)
tGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACg > 2:5386326/1‑93 (MQ=255)
gATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTa < 1:6822743/93‑1 (MQ=255)
gATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTa > 2:4193752/1‑93 (MQ=255)
aTGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAt < 1:7329149/93‑1 (MQ=255)
aTGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAt < 1:2047804/93‑1 (MQ=255)
tgtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATc > 2:8825242/1‑93 (MQ=255)
gtgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCa > 1:610147/1‑93 (MQ=255)
tgCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCTCCCGATCGCTCATATGACGTATCAc < 2:7768190/93‑1 (MQ=255)
cAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCg > 1:949281/1‑93 (MQ=255)
cAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCg > 1:4043104/1‑93 (MQ=255)
cggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga < 2:7234934/92‑1 (MQ=255)
aGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCga > 2:2494386/1‑93 (MQ=255)
ggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgag > 2:4047993/1‑93 (MQ=255)
ggTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgag > 2:5105354/1‑93 (MQ=255)
gTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCgaga > 2:3663809/1‑93 (MQ=255)
gTGACGTCAGCGCCTGCTGCGCGTAACCCAGTTCTACAATCTGCCCGAGATACATCGCCGCCACCCGATCGCTCATATGACGTATCACCgagc < 1:2192481/93‑2 (MQ=255)
tGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGAc < 2:2952687/93‑1 (MQ=255)
gCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa > 2:1321303/1‑93 (MQ=255)
gCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa < 2:2906726/93‑1 (MQ=255)
gCCGTAAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACa > 2:7503062/1‑93 (MQ=255)
ccGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAt < 2:270136/93‑1 (MQ=255)
ccGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAt > 1:3070149/1‑93 (MQ=255)
cGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAtt < 2:7635898/93‑1 (MQ=255)
cGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAtt > 2:9817342/1‑93 (MQ=255)
gccAGCACCTGCTGCGCGTCACCCAGGTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCTAGTCAGtg > 2:8932844/3‑93 (MQ=37)
gTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtg > 2:10009306/1‑93 (MQ=255)
gTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtg < 2:1380429/93‑1 (MQ=255)
aGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgt < 2:6347081/93‑1 (MQ=255)
gCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATtgtgtg > 1:8821191/1‑93 (MQ=255)
ccccTGCTGCGCGCCAACCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGa < 2:9319952/91‑1 (MQ=38)
cACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGa < 1:1544498/93‑1 (MQ=255)
ccTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGaaa < 2:1136309/93‑1 (MQ=255)
ccTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGaaa < 1:5159654/93‑1 (MQ=255)
ctgctgCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAt < 2:7090506/93‑1 (MQ=255)
tgctgcGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc < 2:679511/93‑1 (MQ=255)
tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc < 2:1587160/93‑1 (MQ=255)
tgctgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATc < 2:8218124/93‑1 (MQ=255)
tgcGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGc < 1:1338347/93‑1 (MQ=255)
gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca > 2:4521244/1‑93 (MQ=255)
gcgcGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGca < 1:8639019/93‑1 (MQ=255)
gcgTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca > 1:2631291/1‑93 (MQ=255)
gcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca > 1:9180278/1‑93 (MQ=255)
gcgTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGcaca < 1:1111906/93‑1 (MQ=255)
gTCACCCAGTTCTACAATCTGCCCGAGATGCATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATCGTGTGAAATCAGCACATa < 2:7554080/93‑1 (MQ=255)
gTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATa > 1:1095950/1‑93 (MQ=255)
tCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAg < 1:4550698/93‑1 (MQ=255)
gCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGt < 2:587978/93‑1 (MQ=255)
|
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGT > NC_000913/1555298‑1555480
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > NC_000913/1555295‑1555481
|
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCA < SRR4302540.6948474/94‑1 (MQ=60)
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCA < SRR4302540.6948472/94‑1 (MQ=60)
TCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCAC < SRR4302540.2743793/94‑1 (MQ=60)
TTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCC > SRR4302540.8885643/1‑94 (MQ=60)
TCCTCCAGCGGTTTATCAATGGCGGGGAGGGCATCCCGGAATAATCGGGGGTATGGAAGTGCAGGTGCCGTCTGCACCTGCTGCACGTCACCCA > SRR4302540.5905293/1‑94 (MQ=60)
TCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTT > SRR4302540.2575101/1‑94 (MQ=60)
AGCGGTTTATCAATGGCGGGGAGTGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTA < SRR4302540.6516307/94‑1 (MQ=60)
AGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTA > SRR4302540.641239/1‑94 (MQ=60)
AGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTA > SRR4302540.7029326/1‑94 (MQ=60)
CGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACA < SRR4302540.6331209/94‑1 (MQ=60)
GGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGGTGCGGAGGTGCCGGCAGCACCTGCTGCGCGTCACCCAGTTCTAaca > SRR4302540.9197148/1‑91 (MQ=60)
GGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAA > SRR4302540.7536916/1‑94 (MQ=60)
GGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAA > SRR4302540.7536915/1‑94 (MQ=60)
GTTTATCAATGGCGGGGAGGGAATCCAGCAATAATTGGGCGTATGGATGTGCAGGGGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAAT > SRR4302540.7849647/1‑94 (MQ=60)
TTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATC > SRR4302540.9993202/1‑94 (MQ=60)
TTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATC < SRR4302540.867924/94‑1 (MQ=60)
TTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGGGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATC > SRR4302540.7181688/1‑94 (MQ=60)
TTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCT > SRR4302540.977576/1‑94 (MQ=60)
TTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCT < SRR4302540.3339183/94‑1 (MQ=60)
TATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTG < SRR4302540.1634459/94‑1 (MQ=60)
TATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTC > SRR4302540.4897670/1‑94 (MQ=60)
CTCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGC < SRR4302540.5572929/94‑1 (MQ=60)
ATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGGGCTGGCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGC > SRR4302540.6561831/1‑94 (MQ=60)
ATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGA < SRR4302540.7864791/94‑1 (MQ=60)
GCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGAGCGTCACCCAGTTCTACAATCTGCCCGAGAT > SRR4302540.715623/1‑94 (MQ=60)
CGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATA < SRR4302540.68400/94‑1 (MQ=60)
GGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAC > SRR4302540.890892/1‑94 (MQ=60)
GGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGCGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATAC > SRR4302540.4045962/1‑94 (MQ=60)
GGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACA < SRR4302540.9750250/94‑1 (MQ=60)
GGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACA < SRR4302540.3838023/94‑1 (MQ=60)
GGGAGGGAATCCAGCAATAATCGGGTGTATGGAGGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACA < SRR4302540.9835782/94‑1 (MQ=60)
GGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACAT < SRR4302540.5151563/94‑1 (MQ=60)
GGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCA < SRR4302540.5285507/94‑1 (MQ=60)
AGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCA < SRR4302540.7920652/94‑1 (MQ=60)
AGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCA > SRR4302540.5569601/1‑94 (MQ=60)
GGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCAC > SRR4302540.442189/1‑94 (MQ=60)
GAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTCCAATCTGCCCGAGATACATCACCG > SRR4302540.7324764/1‑94 (MQ=60)
AATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGC < SRR4302540.5551966/94‑1 (MQ=60)
ATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCC > SRR4302540.7170594/1‑94 (MQ=60)
CAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACC > SRR4302540.2340916/1‑94 (MQ=60)
CAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGA > SRR4302540.1411336/1‑94 (MQ=60)
AATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGAT < SRR4302540.7250990/94‑1 (MQ=60)
GGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACTGCCACCCGATCGCTCAT > SRR4302540.9078181/1‑94 (MQ=60)
GGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCAT > SRR4302540.129807/1‑94 (MQ=60)
GGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCAT > SRR4302540.10057921/1‑94 (MQ=60)
GTGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATAT > SRR4302540.1197139/1‑94 (MQ=60)
TGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATG < SRR4302540.2049008/94‑1 (MQ=60)
TGTATGGATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATG < SRR4302540.1112970/94‑1 (MQ=60)
GTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGA > SRR4302540.7667132/1‑94 (MQ=60)
TATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCTCTCATATGAC < SRR4302540.7735069/94‑1 (MQ=60)
TATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGAC > SRR4302540.3266015/1‑94 (MQ=60)
TGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGT > SRR4302540.160829/1‑94 (MQ=60)
GATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAT < SRR4302540.7841835/94‑1 (MQ=60)
GATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTAT < SRR4302540.6898273/94‑1 (MQ=60)
ATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATC < SRR4302540.7410974/94‑1 (MQ=60)
ATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATC < SRR4302540.1687256/94‑1 (MQ=60)
ATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATC > SRR4302540.2577886/1‑94 (MQ=60)
ATGTGCAGGTGCCGTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATC < SRR4302540.2069862/94‑1 (MQ=60)
TGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCA > SRR4302540.616668/1‑94 (MQ=60)
TGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCA > SRR4302540.9393561/1‑94 (MQ=60)
GCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCG > SRR4302540.4086692/1‑94 (MQ=60)
GCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCG < SRR4302540.1163266/94‑1 (MQ=60)
GCAGGTGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCG > SRR4302540.959157/1‑94 (MQ=60)
GTGACGTCAGCGCCTGCTGCGCGTAACCCAGTTCTACAATCTGCCCGAGATACATCGCCGCCACCCGATCGCTCATATGACGTATCACCGAGCC < SRR4302540.2216160/94‑1 (MQ=60)
TGCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACA > SRR4302540.5870530/1‑94 (MQ=60)
GCCGTCAGCACCTGCTGCGCGTCACCTAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAT < SRR4302540.4059249/94‑1 (MQ=60)
GCCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACAT > SRR4302540.3103838/1‑94 (MQ=60)
CCGTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATT > SRR4302540.4485023/1‑94 (MQ=60)
GTCAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGT > SRR4302540.6220405/1‑94 (MQ=60)
GTCAGCACCTACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGT > SRR4302540.9544514/1‑94 (MQ=60)
CAGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGT > SRR4302540.839813/1‑94 (MQ=60)
AGTACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG > SRR4302540.6988275/1‑94 (MQ=60)
AGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG > SRR4302540.8923187/1‑94 (MQ=60)
AGCACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTG > SRR4302540.1275642/1‑94 (MQ=60)
CACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCCCCGCCACCCGCTCCCTCATATGACGTATCCCCGAGACATTGTGTGCA > SRR4302540.8856976/1‑94 (MQ=60)
CACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAA < SRR4302540.5940007/94‑1 (MQ=60)
CACCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAA < SRR4302540.1561550/94‑1 (MQ=60)
CCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAT < SRR4302540.5215731/94‑1 (MQ=60)
CCTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAAT > SRR4302540.3792368/1‑94 (MQ=60)
CTGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATC > SRR4302540.6990572/1‑94 (MQ=60)
TGCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCA < SRR4302540.2085182/94‑1 (MQ=60)
GCTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAG < SRR4302540.4221018/94‑1 (MQ=60)
ACTGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAG < SRR4302540.5202022/94‑1 (MQ=60)
TGCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCA < SRR4302540.1352359/94‑1 (MQ=60)
GCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCAC < SRR4302540.8739369/94‑1 (MQ=60)
GCGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCAC < SRR4302540.8739370/94‑1 (MQ=60)
CGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA > SRR4302540.2659768/1‑94 (MQ=60)
CGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA < SRR4302540.1346745/94‑1 (MQ=60)
CGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA > SRR4302540.9290384/1‑94 (MQ=60)
CGCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACA > SRR4302540.2998424/1‑94 (MQ=60)
GCGTCACCCAGTTCTACAATCTGCCCGAGATACATCGCCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACAT < SRR4302540.5227486/94‑1 (MQ=60)
GCGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACAT < SRR4302540.1123416/94‑1 (MQ=60)
CGTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATA > SRR4302540.1107225/1‑94 (MQ=60)
GTCACTCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAG < SRR4302540.5797909/94‑1 (MQ=60)
GTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAG > SRR4302540.2362835/1‑94 (MQ=60)
GTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAG < SRR4302540.6521476/94‑1 (MQ=60)
GTCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAG > SRR4302540.2209105/1‑94 (MQ=60)
TCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGG < SRR4302540.4599914/94‑1 (MQ=60)
TCACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGG < SRR4302540.2254253/94‑1 (MQ=60)
CACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGT < SRR4302540.8264800/94‑1 (MQ=60)
GCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC < SRR4302540.7901637/94‑1 (MQ=60)
CCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC < SRR4302540.6622115/94‑1 (MQ=60)
ACCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC < SRR4302540.9671371/94‑1 (MQ=60)
|
TTCTTCCTCCAGCGGTTTATCAATGGCGGGGAGGGAATCCAGCAATAATCGGGTGTATGGATGTGCAGGTGCCGTCAGCACCTGCTGCGCGTCGCCCAGTTCTACAATCTGCCCGAGATACATCACCGCCACCCGATCGCTCATATGACGTATCACCGAGACATTGTGTGAAATCAGCACATAGGTC > NC_000913/1555295‑1555481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
