Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,565,715 |
A→G |
V378A (GTG→GCG) |
b1491 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,565,715 | 0 | A | G | 100.0%
| 681.3
/ NA
| 209 | V378A (GTG→GCG) | b1491 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (91/118); total (91/118) |
Only 100 of 212 total aligned reads displayed.
GGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCG > NC_000913/1565625‑1565804
|
gCACAGCATGGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCtt < 2:1539971/93‑1 (MQ=255)
gCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCtt < 1:5295002/93‑1 (MQ=255)
gCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTGCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCtt < 1:3838054/93‑1 (MQ=255)
cacaGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCttt < 2:199667/93‑1 (MQ=255)
acaGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTta < 2:6038023/93‑1 (MQ=255)
caGCATCGTTAAGATCGAGCTGCTTTCTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTtat < 1:3401163/93‑1 (MQ=255)
aGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTtata < 2:5999116/93‑1 (MQ=255)
gCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAg < 1:707226/93‑1 (MQ=255)
aTCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGaa > 2:2540718/1‑93 (MQ=255)
aTCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGaa < 2:4536297/93‑1 (MQ=255)
aTCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGaa < 1:2962784/93‑1 (MQ=255)
aTCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGaa > 1:1072773/1‑93 (MQ=255)
tCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAg > 1:5630898/1‑93 (MQ=255)
tCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAg > 2:1652479/1‑93 (MQ=255)
cGTTAATATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAgg < 2:5416028/93‑1 (MQ=255)
cGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAgg > 2:3786222/1‑93 (MQ=255)
gTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGc > 1:1905487/1‑93 (MQ=255)
ttAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCg > 2:5848716/1‑93 (MQ=255)
ttAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCg < 2:2816086/93‑1 (MQ=255)
ttAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCg > 1:5947496/1‑93 (MQ=255)
ttAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGACTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCg > 1:1480155/1‑93 (MQ=255)
tAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGa < 2:4242652/93‑1 (MQ=255)
tAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGa < 1:5365600/93‑1 (MQ=255)
tAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGa < 2:625154/93‑1 (MQ=255)
tAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGa < 1:5770183/93‑1 (MQ=255)
aaGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAt < 1:5116471/93‑1 (MQ=255)
aaGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAt < 2:739640/93‑1 (MQ=255)
aaGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAt < 2:5577159/93‑1 (MQ=255)
aaGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAt > 1:4464187/1‑93 (MQ=255)
aGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGaca < 2:295965/93‑3 (MQ=255)
gATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATAc < 2:4918519/93‑1 (MQ=255)
gATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATAc < 1:3950320/93‑1 (MQ=255)
gATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATAc < 1:5153805/93‑1 (MQ=255)
tCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCg > 1:2130208/1‑93 (MQ=255)
tCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCg < 1:85994/93‑1 (MQ=255)
tCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCg < 1:930200/93‑1 (MQ=255)
cGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGa > 1:5906027/1‑93 (MQ=255)
cGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGa > 2:1721577/1‑93 (MQ=255)
gAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGat > 2:3809999/1‑93 (MQ=255)
gctgctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGatat > 2:929255/1‑93 (MQ=255)
gctgctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGatat > 1:1827123/1‑93 (MQ=255)
ctgctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGAtata < 1:1736484/93‑1 (MQ=255)
ctgctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGAtata > 1:2432828/1‑93 (MQ=255)
tgctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATAc < 2:1117707/93‑1 (MQ=255)
gctTTTCCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACa < 2:5602674/93‑1 (MQ=255)
ttttttCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAg < 1:4513553/92‑1 (MQ=255)
ctTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAg < 2:5773286/93‑1 (MQ=255)
tttttCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAgg > 1:2610984/1‑93 (MQ=255)
ttttCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGc < 1:1942304/93‑1 (MQ=255)
ttttCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGc > 1:4882083/1‑93 (MQ=255)
tttCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCg < 2:3376915/93‑1 (MQ=255)
tCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCggg > 2:605738/1‑93 (MQ=255)
tCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCggg > 1:2099083/1‑93 (MQ=255)
cAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGt < 1:276516/93‑1 (MQ=255)
gTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGcc > 2:6137726/1‑93 (MQ=255)
tCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTg > 1:1338775/1‑93 (MQ=255)
ccGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACTCGCTTTATAGAAGGCGATACCGATATACAGGCGGGCCCTgg > 1:6039920/1‑93 (MQ=255)
ccGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTgg < 1:2223045/93‑1 (MQ=255)
cGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCCGGt > 2:44809/1‑93 (MQ=255)
ggTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTc < 2:1959074/93‑1 (MQ=255)
aCGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGt < 2:2225241/93‑1 (MQ=255)
gccgccGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGttt < 2:5482984/93‑1 (MQ=255)
gccgccGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGttt < 2:3170085/93‑1 (MQ=255)
cgccgTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTaa < 1:4026266/93‑1 (MQ=255)
gTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTTACGAc > 2:5873798/1‑93 (MQ=255)
gTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGGCGGGTTTACGAc > 2:1403571/1‑93 (MQ=255)
ttAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGTTTTAAGACa > 2:2627157/1‑93 (MQ=255)
tAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACAt < 2:3571990/93‑1 (MQ=255)
aaTCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATc < 1:3185048/93‑1 (MQ=255)
atcatcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATAGAGGCGGGTCCTGGTCGGTTTAACGACATcc < 2:4575326/93‑1 (MQ=255)
atcatcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATcc < 2:1034131/93‑1 (MQ=255)
tcatcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCg < 1:4808958/93‑1 (MQ=255)
tcatcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCCGGCGGGGTTAACCACATccc > 2:5628509/1‑92 (MQ=255)
tcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATTCGccc > 2:4720333/1‑93 (MQ=255)
tcCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGccc < 2:264494/93‑1 (MQ=255)
ccAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCcca < 2:855764/93‑1 (MQ=255)
cAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCccac < 1:1161778/93‑1 (MQ=255)
aGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGTTTAACGACATCCGCccacc > 1:4275757/1‑93 (MQ=255)
gTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGTTTTACGACATCccccccccc > 2:2674944/1‑92 (MQ=255)
cTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCAtt < 1:1260644/93‑1 (MQ=255)
tGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCCGGTCGGGTTAAAGACATCCGCCCACCAttt > 1:3391263/1‑93 (MQ=255)
ggCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGGGGGGTTAACGACATCCGCCCACCAtttt > 2:5033200/1‑93 (MQ=255)
gCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTTACGACATCCGCCCACCACTTTg > 2:2414626/1‑93 (MQ=255)
ctctATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGGCGGGTTAAAGACATCCGCCCACCCtttttc > 1:573042/1‑91 (MQ=255)
tctATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTTACGACATCCGCCCACCATTTTGcc > 1:3753409/1‑93 (MQ=255)
ctATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCa > 1:5215722/1‑93 (MQ=255)
tATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGGTTAACGACATCCGCCCACCCTTTTGCCaa > 2:5114551/1‑93 (MQ=255)
aTCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAac < 2:4274497/93‑1 (MQ=255)
aTCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAac < 1:1602565/93‑1 (MQ=255)
tCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAaca < 2:5344164/93‑1 (MQ=255)
cTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGGCTGGTCGGGTTTACGACATCCGCCCACCCTTTTTCCAaaac > 2:3894709/1‑93 (MQ=255)
tttGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACg < 1:4147138/93‑1 (MQ=255)
ttGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCCGGGCGGGTTAACGACATCCGCCCCCCAATTTCCCCacaccc > 2:2283328/1‑91 (MQ=255)
tGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTc < 2:4007381/93‑1 (MQ=255)
gAAGGTTCACCCGCTTTATAGAAGGCGATACGGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCa < 2:5019207/93‑1 (MQ=255)
tCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTTCCAACACGCCATAAcgc > 1:596546/1‑93 (MQ=255)
ccccGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAAcgcgc < 1:4418162/92‑1 (MQ=255)
aCCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAAcgcgc < 1:1513999/93‑1 (MQ=255)
cccGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAAcgcgcg < 1:3550035/93‑1 (MQ=255)
cccGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGGCGGGTTAACGACATCCGCCCACCATTTTGGCCACACGTCATAAagcgcg > 2:4101475/1‑93 (MQ=255)
|
GGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCG > NC_000913/1565625‑1565804
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCAC > NC_000913/1565622‑1565808
|
TCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCG < SRR4302533.5877558/94‑1 (MQ=60)
TCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCG < SRR4302533.5294265/94‑1 (MQ=60)
GGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCT > SRR4302533.1811903/1‑94 (MQ=60)
GCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTT < SRR4302533.5800193/94‑1 (MQ=60)
GCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTT < SRR4302533.5326716/94‑1 (MQ=60)
GCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTGCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTT < SRR4302533.3861503/94‑1 (MQ=60)
CACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTA > SRR4302533.5375035/1‑94 (MQ=60)
CAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATA < SRR4302533.5134958/94‑1 (MQ=60)
CAGCATCGTTAAGATCGAGCTGCTTTCTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATA < SRR4302533.3422164/94‑1 (MQ=60)
AGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAG > SRR4302533.1320757/1‑94 (MQ=60)
AGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAG < SRR4302533.3643483/94‑1 (MQ=60)
GCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGA < SRR4302533.711403/94‑1 (MQ=60)
CATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAA > SRR4302533.1079096/1‑94 (MQ=60)
ATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAG > SRR4302533.5197666/1‑94 (MQ=60)
ATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAG < SRR4302533.2980897/94‑1 (MQ=60)
ATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAG > SRR4302533.5664950/1‑94 (MQ=60)
ATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAG < SRR4302533.5674521/94‑1 (MQ=60)
ATCGTTAAGATCGAGCTGCTTTTTCAGTCCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAG < SRR4302533.2509850/94‑1 (MQ=60)
TCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGG < SRR4302533.1119552/94‑1 (MQ=60)
TCG‑TAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGC < SRR4302533.1530631/94‑1 (MQ=60)
CGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGC > SRR4302533.1917112/1‑94 (MQ=60)
GTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCG > SRR4302533.5983469/1‑94 (MQ=60)
GTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGACTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCG > SRR4302533.1489094/1‑94 (MQ=60)
TTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGA > SRR4302533.2243363/1‑94 (MQ=60)
TAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAT < SRR4302533.5805023/94‑1 (MQ=60)
TAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAT > SRR4302533.4491187/1‑94 (MQ=60)
TAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGAT < SRR4302533.5397832/94‑1 (MQ=60)
AAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATA < SRR4302533.5147390/94‑1 (MQ=60)
GATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACC < SRR4302533.5184934/94‑1 (MQ=60)
GATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACC < SRR4302533.3974405/94‑1 (MQ=60)
ATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCG > SRR4302533.2143343/1‑94 (MQ=60)
ATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCG > SRR4302533.3061599/1‑94 (MQ=60)
TCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGA > SRR4302533.5941692/1‑94 (MQ=60)
TCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGA < SRR4302533.86546/94‑1 (MQ=60)
TCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGA < SRR4302533.935661/94‑1 (MQ=60)
CGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGAT < SRR4302533.5924174/94‑1 (MQ=60)
GAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATA < SRR4302533.868344/94‑1 (MQ=60)
AGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATAT > SRR4302533.1838283/1‑94 (MQ=60)
GCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATA > SRR4302533.2447860/1‑94 (MQ=60)
CTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATAC < SRR4302533.1747021/94‑1 (MQ=60)
TGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACA < SRR4302533.618964/94‑1 (MQ=60)
TGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACA > SRR4302533.200751/1‑94 (MQ=60)
GCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAG < SRR4302533.530443/94‑1 (MQ=60)
TTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGG < SRR4302533.4540887/94‑1 (MQ=60)
CTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGG > SRR4302533.2627010/1‑94 (MQ=60)
TTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGC > SRR4302533.4911659/1‑94 (MQ=60)
TTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGC < SRR4302533.4489641/94‑1 (MQ=60)
TTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGC < SRR4302533.4440584/94‑1 (MQ=60)
TTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCG > SRR4302533.393569/1‑94 (MQ=60)
TTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCG < SRR4302533.1954151/94‑1 (MQ=60)
TTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGG > SRR4302533.1492774/1‑94 (MQ=60)
TTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGG > SRR4302533.3413008/1‑94 (MQ=60)
TTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGG > SRR4302533.2112034/1‑94 (MQ=60)
TCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGT < SRR4302533.982583/94‑1 (MQ=60)
TCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGG > SRR4302533.1916136/1‑94 (MQ=60)
CAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTC < SRR4302533.278198/94‑1 (MQ=60)
AGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCC > SRR4302533.5987904/1‑94 (MQ=60)
GTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCT < SRR4302533.2862287/94‑1 (MQ=60)
GTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCT > SRR4302533.2183478/1‑94 (MQ=60)
TTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTG > SRR4302533.1346833/1‑94 (MQ=60)
TTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTG < SRR4302533.1390639/94‑1 (MQ=60)
TTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTG < SRR4302533.5424689/94‑1 (MQ=60)
TCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACTCGCTTTATAGAAGGCGATACCGATATACAGGCGGGCCCTGG > SRR4302533.6076519/1‑94 (MQ=60)
CCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGT < SRR4302533.2236777/94‑1 (MQ=60)
GTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGG > SRR4302533.4011700/1‑94 (MQ=60)
CGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAAC < SRR4302533.4050776/94‑1 (MQ=60)
CGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGGTTTAC > SRR4302533.4061708/1‑94 (MQ=60)
CGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGAC < SRR4302533.4177107/94‑1 (MQ=60)
GTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACA < SRR4302533.856598/94‑1 (MQ=60)
TTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAAAGACAT > SRR4302533.2128657/1‑94 (MQ=60)
AATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCC < SRR4302533.3204638/94‑1 (MQ=60)
TCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGC < SRR4302533.4838087/94‑1 (MQ=60)
TCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTTGTCGGGTTAACGACATCCGC > SRR4302533.3532311/1‑94 (MQ=60)
CATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCC < SRR4302533.3844844/94‑1 (MQ=60)
TCCAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTAACGACATCCGCCCC > SRR4302533.5180419/1‑94 (MQ=60)
CAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACC < SRR4302533.1168750/94‑1 (MQ=60)
CAGTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGTTTAACGACATCCGCCCACC > SRR4302533.4301476/1‑94 (MQ=60)
GTCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCAT < SRR4302533.1943174/94‑1 (MQ=60)
TCTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATT < SRR4302533.1666659/94‑1 (MQ=60)
CTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTT < SRR4302533.1268184/94‑1 (MQ=60)
CTGGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCCGGTCGGGTTAAAGACATCCGCCCACCATTT > SRR4302533.3412205/1‑94 (MQ=60)
GGCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTG < SRR4302533.2730806/94‑1 (MQ=60)
GCTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGGCGGGTTAAAGACATCCGCCCACCCTTTTTC > SRR4302533.576423/1‑94 (MQ=60)
CTCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTTACGACATCCGCCCACCATTTTGCC > SRR4302533.3776416/1‑94 (MQ=60)
TCTATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCA > SRR4302533.5247125/1‑94 (MQ=60)
ATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACA < SRR4302533.515153/94‑1 (MQ=60)
ATCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACA < SRR4302533.1612271/94‑1 (MQ=60)
TCTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACAC < SRR4302533.1184929/94‑1 (MQ=60)
CTTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGGCGGGTTAACGACATCCCCCCACCCTTTTGTCAACACC > SRR4302533.4698692/1‑94 (MQ=60)
CTTTGAAGGTTCACCCGCTTTATAGAAGGAGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACG < SRR4302533.4501700/94‑1 (MQ=60)
TTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGT < SRR4302533.4172264/94‑1 (MQ=60)
TTTGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGT < SRR4302533.4875138/94‑1 (MQ=60)
TGAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGGTTAACGACATCCGCCCACCATTTTGCCAACACGTCA > SRR4302533.5969317/1‑94 (MQ=60)
GAAGGTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCAT < SRR4302533.2902508/94‑1 (MQ=60)
GTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACG < SRR4302533.186987/94‑1 (MQ=60)
GTTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACG < SRR4302533.3219840/94‑1 (MQ=60)
TTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTTCCAACACGCCATAACGC > SRR4302533.600063/1‑94 (MQ=60)
TTCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGC > SRR4302533.6047947/1‑94 (MQ=60)
TCACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCG < SRR4302533.3990786/94‑1 (MQ=60)
CACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCTGGTCGGGTTAACGACATCCGCCCACCATTTTTCCAACACGTCATAACGCGG > SRR4302533.5953156/1‑94 (MQ=60)
ACCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCG < SRR4302533.1523122/94‑1 (MQ=60)
CCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTTCTGGTCGGgttaaagaaatccccccccccatttgcccacacatcataaccagccg > SRR4302533.2048357/1‑47 (MQ=60)
CCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTTCCAACACGTCATAACGCGCGG > SRR4302533.5879153/1‑94 (MQ=60)
CCCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGG < SRR4302533.3571905/94‑1 (MQ=60)
CCGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGC < SRR4302533.5036916/94‑1 (MQ=60)
CGCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCA < SRR4302533.5923041/94‑1 (MQ=60)
CGCTTTATAGAAGGCGATACCGATATACAGGCGGGGCCCGGGCGGGTTAACGACATCCGCCCACCCTTTTGCCAACACGTCATAACGCGCGGCA > SRR4302533.4377826/1‑94 (MQ=60)
GCTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGGTTTACGACATCCGCCCACCATTTTTCCAACACGTCATAACGCGCGGCAC > SRR4302533.4859790/1‑94 (MQ=60)
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TCGGGCACAGCATCGTTAAGATCGAGCTGCTTTTTCAGTTCCGGTACGCCGCCGTTAATCATCCAGTCTGGCTCTATCTTTGAAGGTTCACCCACTTTATAGAAGGCGATACCGATATACAGGCGGGTCCTGGTCGGTTTAACGACATCCGCCCACCATTTTGCCAACACGTCATAACGCGCGGCAC > NC_000913/1565622‑1565808
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
