Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,928,564 |
T→C |
T70A (ACC→GCC) |
yebG ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,928,564 | 0 | T | C | 100.0%
| 661.7
/ NA
| 207 | T70A (ACC→GCC) | yebG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/107); total (100/107) |
Only 100 of 218 total aligned reads displayed.
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGG > NC_000913/1928474‑1928653
|
aGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGgcgc < 1:1501373/93‑1 (MQ=255)
aGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGgcgc > 1:6004890/1‑93 (MQ=255)
ggtGCTTCAGGCGGCGTGTGAGGCATCTCACTCCTCGGATTCAGCACCGACGACCGGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCt < 2:2087064/91‑1 (MQ=255)
gTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCt > 2:1967191/1‑93 (MQ=255)
gTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCt > 1:1162078/1‑93 (MQ=255)
gTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCt > 1:4558695/1‑93 (MQ=255)
tGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCa < 2:6280782/93‑1 (MQ=255)
tGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCa > 1:2155638/1‑93 (MQ=255)
gCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAg > 1:3625903/1‑93 (MQ=255)
gCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAg > 2:5406278/1‑93 (MQ=255)
cTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGc < 1:4859243/93‑1 (MQ=255)
ttCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGca < 1:5920057/93‑1 (MQ=255)
ttCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGca < 2:4323800/93‑1 (MQ=255)
ttCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGca < 2:4538185/93‑1 (MQ=255)
tCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGcac < 2:3405537/93‑1 (MQ=255)
tCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGcac < 2:3933185/93‑1 (MQ=255)
aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACAt < 1:228449/93‑1 (MQ=255)
aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACAt < 2:2974253/93‑1 (MQ=255)
gCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCt < 2:5272424/93‑1 (MQ=255)
ccGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCtt > 2:465789/1‑93 (MQ=255)
cgcgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCttt > 2:2520609/1‑93 (MQ=255)
cgcgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCttt > 1:4414941/1‑93 (MQ=255)
gcgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCtttt > 2:1203275/1‑93 (MQ=255)
cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCttttt < 1:2021976/93‑1 (MQ=255)
tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt < 1:1528013/93‑1 (MQ=255)
tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt < 2:2890247/93‑1 (MQ=255)
tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt < 1:773167/93‑1 (MQ=255)
tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGt > 2:4862708/1‑93 (MQ=255)
tgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTc > 1:2148278/1‑93 (MQ=255)
tgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTc < 2:3633834/93‑1 (MQ=255)
aGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTg > 1:3718651/1‑93 (MQ=255)
aGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTg < 1:4881248/93‑1 (MQ=255)
ggCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgc > 1:5637773/1‑93 (MQ=255)
cATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgcca > 2:4426097/1‑93 (MQ=255)
cATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgcca < 2:6143059/93‑1 (MQ=255)
aTCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccag > 2:837398/1‑93 (MQ=255)
tCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagc > 1:342808/1‑93 (MQ=255)
cTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcc < 1:4247374/93‑1 (MQ=255)
ttCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcca > 2:4043245/1‑93 (MQ=255)
ttCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTgccagcca < 2:3195710/93‑1 (MQ=255)
tCCTCTTCGGCTTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTGGTTCTggcagccgt > 2:937693/1‑91 (MQ=255)
tCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCAt > 2:474987/1‑93 (MQ=255)
ccTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATa < 1:3301132/93‑1 (MQ=255)
ccTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATa < 2:2931712/93‑1 (MQ=255)
ccTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATa > 2:4365311/1‑93 (MQ=255)
ccTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATa < 1:3523202/93‑1 (MQ=255)
ctctTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAg > 2:5663650/1‑93 (MQ=255)
ctTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCg > 2:2196946/1‑93 (MQ=255)
ttCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGa > 2:429826/1‑93 (MQ=255)
tCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGaa < 2:1764469/93‑1 (MQ=255)
tCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGaa < 1:1091032/93‑1 (MQ=255)
cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGaaa < 1:5556569/93‑1 (MQ=255)
cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGaaa < 2:2434913/93‑1 (MQ=255)
gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg < 2:160141/93‑1 (MQ=255)
gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg < 1:5726305/93‑1 (MQ=255)
gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg < 1:2128644/93‑1 (MQ=255)
gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg < 2:245253/93‑1 (MQ=255)
gATTCAGCACCGACGACCTGTGGGGACGGTAATTTGACGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAgg > 2:2402999/1‑93 (MQ=255)
aTTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAggg > 2:5425550/1‑93 (MQ=255)
ttCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGc < 1:13898/93‑1 (MQ=255)
tCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCt > 1:5400100/1‑93 (MQ=255)
tCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCt < 2:2012758/93‑1 (MQ=255)
gCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa > 1:2515909/1‑93 (MQ=255)
cACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCAc < 1:297342/93‑1 (MQ=255)
gacgacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTg > 1:4955215/1‑93 (MQ=255)
acgacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGc < 1:4631914/93‑1 (MQ=255)
acgacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGc < 2:3705463/93‑1 (MQ=255)
cgacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCt > 1:94545/1‑93 (MQ=255)
gacCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTc > 1:979560/1‑93 (MQ=255)
cTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTc < 2:1455098/93‑1 (MQ=255)
cTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTc > 1:1032061/1‑93 (MQ=255)
tgGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTc < 2:3528218/93‑1 (MQ=255)
gggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCa > 1:2006883/1‑93 (MQ=255)
ggACGTTAATTTGCCGGTTTTCAGAAGGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAt < 2:2583647/93‑1 (MQ=255)
ggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAt > 2:1326156/1‑93 (MQ=255)
ggACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAt < 2:3095359/93‑1 (MQ=255)
gACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt > 2:5021539/1‑93 (MQ=255)
gACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt < 2:5289470/93‑1 (MQ=255)
aCGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAttt > 1:5046327/1‑93 (MQ=255)
ggTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGc > 2:1596358/1‑93 (MQ=255)
ggTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGc < 1:5351125/93‑1 (MQ=255)
tAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCAc > 1:2686248/1‑93 (MQ=255)
tAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCAc < 2:2794385/93‑1 (MQ=255)
tAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTGGCTCGTCTTCCATTTGCAc < 2:6120222/93‑1 (MQ=255)
aaTTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACt < 2:249134/93‑1 (MQ=255)
aaTTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACt > 2:5332854/1‑93 (MQ=255)
tGCCGTTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGgag < 2:3134834/93‑1 (MQ=255)
tGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGgag < 2:49544/93‑1 (MQ=255)
tGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGgag < 1:5828718/93‑1 (MQ=255)
gcgggTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGgaga < 1:337550/90‑1 (MQ=255)
ccGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGaa > 1:2873352/1‑93 (MQ=255)
cGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAt < 2:3812776/93‑1 (MQ=255)
ttCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTc > 2:4342436/1‑93 (MQ=255)
tCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCa < 1:3343256/93‑1 (MQ=255)
cAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAg > 2:1039790/1‑93 (MQ=255)
gAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGcc < 2:1848287/93‑1 (MQ=255)
aTGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAg > 1:5756069/1‑93 (MQ=255)
aTGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAg < 2:2557359/93‑1 (MQ=255)
tGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAgg > 1:2553902/1‑93 (MQ=255)
tGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAgg > 2:3226264/1‑93 (MQ=255)
|
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGG > NC_000913/1928474‑1928653
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTG > NC_000913/1928471‑1928655
|
GCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGC > SRR4302533.2005994/1‑94 (MQ=60)
GCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGC > SRR4302533.904038/1‑94 (MQ=60)
GCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGC > SRR4302533.1849547/1‑94 (MQ=60)
CAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCG > SRR4302533.6209920/1‑94 (MQ=60)
CAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCG > SRR4302533.5323981/1‑94 (MQ=60)
CAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCG < SRR4302533.3475489/94‑1 (MQ=60)
CAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCG < SRR4302533.4798685/94‑1 (MQ=60)
AAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGC > SRR4302533.6041274/1‑94 (MQ=60)
AAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGC > SRR4302533.3713603/1‑94 (MQ=60)
AAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGC > SRR4302533.256404/1‑94 (MQ=60)
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCT > SRR4302533.4586342/1‑94 (MQ=60)
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCT < SRR4302533.1510421/94‑1 (MQ=60)
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCT > SRR4302533.1169050/1‑94 (MQ=60)
AGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCT < SRR4302533.1138369/94‑1 (MQ=60)
TTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCA > SRR4302533.2168911/1‑94 (MQ=60)
TGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAG > SRR4302533.3648212/1‑94 (MQ=60)
CTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCA > SRR4302533.259514/1‑94 (MQ=60)
CTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCA < SRR4302533.4888698/94‑1 (MQ=60)
TTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCAC < SRR4302533.5955840/94‑1 (MQ=60)
AGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATC < SRR4302533.229868/94‑1 (MQ=60)
AGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATC < SRR4302533.589545/94‑1 (MQ=60)
AGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATC > SRR4302533.4899146/1‑94 (MQ=60)
CCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTT > SRR4302533.4441600/1‑94 (MQ=60)
CGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTT < SRR4302533.3273181/94‑1 (MQ=60)
GCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTT < SRR4302533.2037283/94‑1 (MQ=60)
CGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTG < SRR4302533.2034430/94‑1 (MQ=60)
CGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTG < SRR4302533.1439160/94‑1 (MQ=60)
TGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTT < SRR4302533.777713/94‑1 (MQ=60)
TGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTT < SRR4302533.1537206/94‑1 (MQ=60)
GTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTC > SRR4302533.2161509/1‑94 (MQ=60)
GAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTG < SRR4302533.6282263/94‑1 (MQ=60)
GAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTG > SRR4302533.3741475/1‑94 (MQ=60)
AGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGC > SRR4302533.5671862/1‑94 (MQ=60)
AGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGC < SRR4302533.4910820/94‑1 (MQ=60)
AGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGC < SRR4302533.4910821/94‑1 (MQ=60)
ATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGC > SRR4302533.344903/1‑94 (MQ=60)
TCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCC < SRR4302533.1532222/94‑1 (MQ=60)
CTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCA < SRR4302533.4273010/94‑1 (MQ=60)
CTGCCTCTTCGGATGCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCA < SRR4302533.3500501/94‑1 (MQ=60)
TCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATA < SRR4302533.4533002/94‑1 (MQ=60)
CCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAG < SRR4302533.3321513/94‑1 (MQ=60)
CCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAG > SRR4302533.5768448/1‑94 (MQ=60)
CCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAG < SRR4302533.3544918/94‑1 (MQ=60)
TCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCG < SRR4302533.5221344/94‑1 (MQ=60)
TCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAA < SRR4302533.2027110/94‑1 (MQ=60)
TCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAA < SRR4302533.1097477/94‑1 (MQ=60)
CGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAG < SRR4302533.2155794/94‑1 (MQ=60)
CGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAG < SRR4302533.5590149/94‑1 (MQ=60)
CGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAG < SRR4302533.1876575/94‑1 (MQ=60)
GATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGG < SRR4302533.5760876/94‑1 (MQ=60)
GATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGG < SRR4302533.2141770/94‑1 (MQ=60)
TTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCCGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCT > SRR4302533.3402853/1‑94 (MQ=60)
TTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCT > SRR4302533.5432548/1‑94 (MQ=60)
TTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCT < SRR4302533.14001/94‑1 (MQ=60)
TTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCT < SRR4302533.825886/94‑1 (MQ=60)
TCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTT > SRR4302533.5603993/1‑94 (MQ=60)
AGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCA > SRR4302533.2531413/1‑94 (MQ=60)
GCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCAC < SRR4302533.2163359/94‑1 (MQ=60)
CACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACA < SRR4302533.299164/94‑1 (MQ=60)
ACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGT > SRR4302533.4662967/1‑94 (MQ=60)
CCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTT > SRR4302533.2452072/1‑94 (MQ=60)
CGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTG > SRR4302533.2708745/1‑94 (MQ=60)
CGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTG > SRR4302533.4985231/1‑94 (MQ=60)
CGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTG < SRR4302533.5556640/94‑1 (MQ=60)
CGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTG > SRR4302533.3381002/1‑94 (MQ=60)
ACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCT < SRR4302533.4659982/94‑1 (MQ=60)
ACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCT > SRR4302533.95141/1‑94 (MQ=60)
CGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTC > SRR4302533.985303/1‑94 (MQ=60)
CGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTC < SRR4302533.5983093/94‑1 (MQ=60)
GACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCG < SRR4302533.3279727/94‑1 (MQ=60)
CCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTC > SRR4302533.1038129/1‑94 (MQ=60)
CCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTC < SRR4302533.1186325/94‑1 (MQ=60)
CTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCT > SRR4302533.2910229/1‑94 (MQ=60)
GGGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCA > SRR4302533.2019244/1‑94 (MQ=60)
GGGACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAT < SRR4302533.4610273/94‑1 (MQ=60)
GACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTT > SRR4302533.5076854/1‑94 (MQ=60)
GACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTT > SRR4302533.5462553/1‑94 (MQ=60)
ACGGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTG > SRR4302533.5427245/1‑94 (MQ=60)
GGTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCA < SRR4302533.5383235/94‑1 (MQ=60)
GTAATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCAC > SRR4302533.2702716/1‑94 (MQ=60)
AATTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTG < SRR4302533.3342441/94‑1 (MQ=60)
TTTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGA < SRR4302533.5885465/94‑1 (MQ=60)
TTGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAG > SRR4302533.2243248/1‑94 (MQ=60)
TGCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGA < SRR4302533.5863936/94‑1 (MQ=60)
GCGGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAA < SRR4302533.106905/94‑1 (MQ=60)
GCGGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAA < SRR4302533.339612/94‑1 (MQ=60)
GCCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAA > SRR4302533.2891032/1‑94 (MQ=60)
CCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAT < SRR4302533.5044597/94‑1 (MQ=60)
CCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAT < SRR4302533.5673343/94‑1 (MQ=60)
CCGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAT > SRR4302533.3588062/1‑94 (MQ=60)
CGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT > SRR4302533.4430408/1‑94 (MQ=60)
CGGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT > SRR4302533.241197/1‑94 (MQ=60)
GGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTT < SRR4302533.97390/94‑1 (MQ=60)
GGTTTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTGCACGTTGtttctttttccttttttttcttcgtaat > SRR4302533.3439205/1‑66 (MQ=60)
TTTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTC < SRR4302533.4783067/94‑1 (MQ=60)
TTCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCA < SRR4302533.1614668/94‑1 (MQ=60)
TCAGAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAG < SRR4302533.3363917/94‑1 (MQ=60)
GAATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCA < SRR4302533.5861772/94‑1 (MQ=60)
AATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAG > SRR4302533.5790807/1‑94 (MQ=60)
AATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAG < SRR4302533.3717257/94‑1 (MQ=60)
AATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAG < SRR4302533.3798058/94‑1 (MQ=60)
ATGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGG > SRR4302533.2569615/1‑94 (MQ=60)
TGGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGT > SRR4302533.4344040/1‑94 (MQ=60)
GGCGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTG < SRR4302533.1682533/94‑1 (MQ=60)
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GCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTG > NC_000913/1928471‑1928655
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
