Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,056,250 |
(T)7→6 |
coding (1619/1644 nt) |
yeeO ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,056,244 | 0 | T | . | 99.5%
| 917.6
/ ‑3.5
| 200 | coding (1625/1644 nt) | yeeO | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (112/87); total (112/88) |
| Fisher's exact test for biased strand distribution p-value = 4.40e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 221 total aligned reads displayed.
TGCCCACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCTTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCAC > NC_000913/2056153‑2056332
|
tGCCCACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCtt < 1:5327991/93‑1 (MQ=255)
cccacccaCAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCtttt < 1:3837018/93‑1 (MQ=255)
cccacccaCAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCtttt < 2:1262260/93‑1 (MQ=255)
cccacccaCAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCtttt < 2:4552513/93‑1 (MQ=255)
cacccacAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCtttttt > 1:5988174/1‑93 (MQ=255)
ccacAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCttttttcac > 1:5129781/1‑90 (MQ=255)
acaATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCacac > 2:319615/1‑93 (MQ=255)
acaATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCacac < 2:3942874/93‑1 (MQ=255)
aTGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACttt < 2:2489992/93‑1 (MQ=255)
aTGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACttt < 2:4949319/93‑1 (MQ=255)
tGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACtttt > 2:598483/1‑93 (MQ=255)
gTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTg < 1:117706/93‑1 (MQ=255)
gTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTg < 1:1608572/93‑1 (MQ=255)
tCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGc < 1:757843/93‑1 (MQ=255)
tCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGc < 1:4564474/93‑1 (MQ=255)
tCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGc < 2:5973081/93‑1 (MQ=255)
aaaGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCgg > 2:3273099/1‑93 (MQ=255)
gCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTc < 1:2583012/93‑1 (MQ=255)
ccTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCg < 2:5260783/93‑1 (MQ=255)
ccTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCg < 1:3490292/93‑1 (MQ=255)
cTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCgg < 2:4641882/93‑1 (MQ=255)
tGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCggg < 2:2390858/93‑1 (MQ=255)
gTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGt < 1:3937829/93‑1 (MQ=255)
ttttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTc > 2:1918685/1‑93 (MQ=255)
tttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCg > 1:5899324/1‑93 (MQ=255)
ttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGa < 2:2332561/93‑1 (MQ=255)
ttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGa < 2:5048314/93‑1 (MQ=255)
ttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGa > 2:887690/1‑93 (MQ=255)
ttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGa < 1:1520398/93‑1 (MQ=255)
ttttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGGCGa > 1:2078689/1‑93 (MQ=255)
tttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAg < 1:4698768/93‑1 (MQ=255)
tttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAg > 1:3099324/1‑93 (MQ=255)
ttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAgg < 1:4041617/93‑1 (MQ=255)
ttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAgg < 1:484118/93‑1 (MQ=255)
ttAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAgg < 2:5539390/93‑1 (MQ=255)
tAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAggg < 1:3371809/93‑1 (MQ=255)
tAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAggg < 1:546130/93‑1 (MQ=255)
aaaTTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGt < 2:130687/93‑1 (MQ=255)
aaaTTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGt > 1:2260052/1‑93 (MQ=255)
aaaTTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGt < 1:952695/93‑1 (MQ=255)
aaTTTGAAATCGTTTGCTGTAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAgggga > 2:6125447/1‑91 (MQ=255)
aaTTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGTC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTa < 1:836709/93‑1 (MQ=255)
gAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTcc < 1:2422300/93‑1 (MQ=255)
aaaTCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTTGAGGGTATTTCCa > 1:5282742/1‑93 (MQ=255)
aaaTCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTTCa > 2:3842825/1‑93 (MQ=255)
aTCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATa > 1:5022591/1‑93 (MQ=255)
cGTTTGCTGGAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGc > 2:2150145/1‑93 (MQ=255)
gTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCCGGGTGAGGGTACTTCCATAGcc > 2:241884/1‑93 (MQ=255)
ttGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCaa < 2:2819846/93‑1 (MQ=255)
ttGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCaa > 2:2951650/1‑93 (MQ=255)
tGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTAtt > 2:5598812/1‑81 (MQ=255)
tGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTAtt < 1:5598812/81‑1 (MQ=255)
tGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAAc < 1:6069795/93‑1 (MQ=255)
tGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAAc < 1:6117606/93‑1 (MQ=255)
tGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGG‑TTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAAc < 2:3555364/93‑1 (MQ=255)
gCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACg < 2:3213601/93‑1 (MQ=255)
tGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTc > 1:4907199/1‑93 (MQ=255)
tGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTc > 1:6182317/1‑93 (MQ=255)
tGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTc < 1:2785267/93‑1 (MQ=255)
tGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTc > 1:509329/1‑93 (MQ=255)
gAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTcc > 2:1546236/1‑93 (MQ=255)
gAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTcc < 1:328405/93‑1 (MQ=255)
aaaTAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCa > 2:2624936/1‑93 (MQ=255)
ataatCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAga > 1:3244180/1‑92 (MQ=255)
ataatCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCCACGTGCAGt > 1:3449893/1‑93 (MQ=255)
ataatCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGCCTTTCCCTAGCCAACGTCCAga > 1:2951027/1‑92 (MQ=255)
aatCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCCACGTCCAGTaa > 2:5772047/1‑93 (MQ=255)
aatCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTaa < 2:2254240/93‑1 (MQ=255)
tCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAAcc < 2:692179/93‑1 (MQ=255)
cTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCa < 1:1268213/93‑1 (MQ=255)
cTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCa < 1:5177646/93‑1 (MQ=255)
cTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCa < 2:3799359/93‑1 (MQ=255)
gCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACCCTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAtt < 1:2526420/93‑1 (MQ=255)
gCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAtt > 1:1759653/1‑93 (MQ=255)
gCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAtt < 1:3749078/93‑1 (MQ=255)
gCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAATAACCAtt > 2:1713959/1‑93 (MQ=255)
aTTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCg < 2:3662415/93‑1 (MQ=255)
ttttGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGc > 1:2708115/1‑93 (MQ=255)
ttttGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAACCAACGTCCAGTAACCATTCGc > 2:3419751/1‑93 (MQ=255)
ttttGTCGTTTATCCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGc < 1:1042135/93‑1 (MQ=255)
tttGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGcc < 2:4822607/93‑1 (MQ=255)
ttGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGccc < 1:5941606/93‑2 (MQ=255)
tGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAg < 2:654541/93‑1 (MQ=255)
tGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAg > 1:5157250/1‑93 (MQ=255)
tGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAg > 1:658126/1‑93 (MQ=255)
gTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCCACGTCCAGTAACCATTCCCCAGTaaa > 2:4299546/1‑93 (MQ=255)
tttATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTaaaa > 2:2703319/1‑93 (MQ=255)
ttATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAAc < 2:1402789/93‑1 (MQ=255)
tATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACa < 1:3898047/93‑1 (MQ=255)
tCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCa > 2:4110035/1‑93 (MQ=255)
gACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAACACgg > 1:4317558/1‑93 (MQ=255)
acacAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGc > 2:2783872/1‑93 (MQ=255)
acacAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACCGc > 1:4017862/1‑93 (MQ=255)
cacaACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGcc < 1:1950998/93‑1 (MQ=255)
acaTCTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGccc < 2:4220497/93‑1 (MQ=255)
caACTGGC‑TTTTTTCACACTTTTGCGGCTCCGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGAACGGCCCg > 1:2496698/1‑93 (MQ=255)
aaCTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGc > 2:1187541/1‑93 (MQ=255)
aCTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGca < 1:1172257/93‑1 (MQ=255)
aCTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTAGAGGGAATTTCCATAGCCAACGTCCAGCAACGCTTCTACAGTAAAACAGCACGGCCCGca > 2:1883663/1‑93 (MQ=255)
cTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGcac > 2:4382312/1‑93 (MQ=255)
|
TGCCCACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCTTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCAC > NC_000913/2056153‑2056332
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCTTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCGG > NC_000913/2056157‑2056343
|
CACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCTTTTTTC > SRR4302533.3568786/1‑94 (MQ=60)
CCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCAC > SRR4302533.5256549/1‑94 (MQ=60)
CCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCAC > SRR4302533.5160771/1‑94 (MQ=60)
ACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACT < SRR4302533.6131958/94‑1 (MQ=60)
ACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACT > SRR4302533.6024957/1‑94 (MQ=60)
ATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTT > SRR4302533.596259/1‑94 (MQ=60)
ATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTT > SRR4302533.2249526/1‑94 (MQ=60)
GTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGC < SRR4302533.118455/94‑1 (MQ=60)
GTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGC < SRR4302533.1618331/94‑1 (MQ=60)
GTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGC > SRR4302533.4524598/1‑94 (MQ=60)
TCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCG < SRR4302533.762304/94‑1 (MQ=60)
TCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCG < SRR4302533.4592149/94‑1 (MQ=60)
CAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGG > SRR4302533.1821161/1‑94 (MQ=60)
AAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCT > SRR4302533.5106904/1‑94 (MQ=60)
AAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCT > SRR4302533.5542071/1‑94 (MQ=60)
AGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTC < SRR4302533.5691263/94‑1 (MQ=60)
GCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCG < SRR4302533.2786376/94‑1 (MQ=60)
GCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCG < SRR4302533.2598895/94‑1 (MQ=60)
CCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGG < SRR4302533.3511819/94‑1 (MQ=60)
CCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATATTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCCG > SRR4302533.3402973/1‑94 (MQ=60)
CTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGG < SRR4302533.3338452/94‑1 (MQ=60)
CTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGG > SRR4302533.2589121/1‑94 (MQ=60)
TGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGT > SRR4302533.2526405/1‑94 (MQ=60)
GTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTC < SRR4302533.3961863/94‑1 (MQ=60)
GTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTC < SRR4302533.3961864/94‑1 (MQ=60)
TTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCG > SRR4302533.3161698/1‑94 (MQ=60)
TTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCG > SRR4302533.5934951/1‑94 (MQ=60)
TTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCG > SRR4302533.142638/1‑94 (MQ=60)
TTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGA < SRR4302533.2500803/94‑1 (MQ=60)
TTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGGCGA > SRR4302533.2091481/1‑94 (MQ=60)
TTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAG < SRR4302533.2417882/94‑1 (MQ=60)
TTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAG > SRR4302533.3118379/1‑94 (MQ=60)
TTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAG < SRR4302533.1529552/94‑1 (MQ=60)
TTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGG < SRR4302533.4727248/94‑1 (MQ=60)
TTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGG < SRR4302533.4066216/94‑1 (MQ=60)
TTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGG < SRR4302533.487012/94‑1 (MQ=60)
TAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGT < SRR4302533.549376/94‑1 (MQ=60)
TAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGT > SRR4302533.2274034/1‑94 (MQ=60)
TAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGT < SRR4302533.3392630/94‑1 (MQ=60)
TAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGT < SRR4302533.5667997/94‑1 (MQ=60)
AAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTA < SRR4302533.958290/94‑1 (MQ=60)
AAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTA < SRR4302533.4334572/94‑1 (MQ=60)
AATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGTC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTAT < SRR4302533.841611/94‑1 (MQ=60)
AATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGAT > SRR4302533.2859775/1‑94 (MQ=60)
ATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGCCTCGGGTCGAGGGTATT > SRR4302533.6157088/1‑94 (MQ=60)
atctgctgtaTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTT < SRR4302533.5632638/84‑1 (MQ=60)
TGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTTC > SRR4302533.2350922/1‑94 (MQ=60)
GAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTTGAGGGTATTTCCA > SRR4302533.5314389/1‑94 (MQ=60)
GAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCA < SRR4302533.2437253/94‑1 (MQ=60)
AAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAAGGGATTTTCAT > SRR4302533.86886/1‑94 (MQ=60)
AATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATA > SRR4302533.5053007/1‑94 (MQ=60)
TCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGC < SRR4302533.4043026/94‑1 (MQ=60)
CGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCC < SRR4302533.6236180/94‑1 (MQ=60)
GTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTTCATAGCCA > SRR4302533.5126142/1‑94 (MQ=60)
GTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCA < SRR4302533.994116/94‑1 (MQ=60)
TGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACG < SRR4302533.6154506/94‑1 (MQ=60)
TGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACG < SRR4302533.6106521/94‑1 (MQ=60)
TGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACG > SRR4302533.5987819/1‑94 (MQ=60)
GCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGT > SRR4302533.155043/1‑94 (MQ=60)
CTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTC > SRR4302533.6219441/1‑94 (MQ=60)
CTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTC > SRR4302533.4936931/1‑94 (MQ=60)
CTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTC > SRR4302533.512354/1‑94 (MQ=60)
TGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCC > SRR4302533.4922167/1‑94 (MQ=60)
TGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCC < SRR4302533.2802382/94‑1 (MQ=60)
GAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCA > SRR4302533.5279081/1‑94 (MQ=60)
GAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCA < SRR4302533.330408/94‑1 (MQ=60)
AAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAG > SRR4302533.3480174/1‑94 (MQ=60)
AAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAG < SRR4302533.5179879/94‑1 (MQ=60)
AATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGT < SRR4302533.5464355/94‑1 (MQ=60)
AATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGT < SRR4302533.3282773/94‑1 (MQ=60)
AATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGA > SRR4302533.3264173/1‑94 (MQ=60)
AATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCCACGTGCAGT > SRR4302533.3471194/1‑94 (MQ=60)
AATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGCCTTTCCCTAGCCAACGTCCAGA > SRR4302533.2969075/1‑94 (MQ=60)
ATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGGCGAGGGGATTTTCATAGCCAACGTCCAGTA > SRR4302533.1202403/1‑94 (MQ=60)
AATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAAC > SRR4302533.1759440/1‑94 (MQ=60)
ATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACC > SRR4302533.4042290/1‑94 (MQ=60)
ATCTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACC > SRR4302533.690708/1‑94 (MQ=60)
CTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAT > SRR4302533.3873775/1‑94 (MQ=60)
CTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAT < SRR4302533.1275804/94‑1 (MQ=60)
CTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCAT < SRR4302533.5208916/94‑1 (MQ=60)
CTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCAT > SRR4302533.4956187/1‑94 (MQ=60)
CTGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCAT > SRR4302533.3846084/1‑94 (MQ=60)
TGCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATT > SRR4302533.1770378/1‑94 (MQ=60)
TCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTC < SRR4302533.1157259/94‑1 (MQ=60)
GCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACCCTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTC < SRR4302533.2541974/94‑1 (MQ=60)
GCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTC < SRR4302533.1180780/94‑1 (MQ=60)
GCATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTC < SRR4302533.3772062/94‑1 (MQ=60)
CATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTTCATAGCCAACGTCCAGTAACCATTCC > SRR4302533.461968/1‑94 (MQ=60)
CATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCG < SRR4302533.4937576/94‑1 (MQ=60)
CATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCG > SRR4302533.3387/1‑94 (MQ=60)
CATTTTGTCGTTTATTCCGACACAACTGGC‑TTGTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCG < SRR4302533.2015974/94‑1 (MQ=60)
ATTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGC > SRR4302533.2724730/1‑94 (MQ=60)
TTTTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCC < SRR4302533.1606082/94‑1 (MQ=60)
TTTTGTCGTTTATCCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCC < SRR4302533.1048263/94‑1 (MQ=60)
TTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCCG < SRR4302533.5977537/94‑1 (MQ=60)
TTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAG > SRR4302533.5188386/1‑94 (MQ=60)
TTGTCGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAG > SRR4302533.662006/1‑94 (MQ=60)
CGTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAA > SRR4302533.4847574/1‑94 (MQ=60)
GTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAA > SRR4302533.6196816/1‑94 (MQ=60)
GTTTATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAA > SRR4302533.5352893/1‑94 (MQ=60)
TTTATTCCGACACATCTGGC‑TTTTTTCACACTTTTGCGGCTCGTGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAAC < SRR4302533.2782516/94‑1 (MQ=60)
TATTCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAG < SRR4302533.3921830/94‑1 (MQ=60)
TCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCAC < SRR4302533.520318/94‑1 (MQ=60)
TCCGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCAC < SRR4302533.4321859/94‑1 (MQ=60)
CGACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAACACGG > SRR4302533.4343557/1‑94 (MQ=60)
GACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACCGC > SRR4302533.4042324/1‑94 (MQ=60)
ACACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCC > SRR4302533.2978617/1‑94 (MQ=60)
CACAACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCC < SRR4302533.1962887/94‑1 (MQ=60)
ACAACTGGC‑TTTTTTCACACTTTTGCGGCTCCGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGAACGGCCCG > SRR4302533.2512098/1‑94 (MQ=60)
AACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAAAAGCACGGCCCGCA > SRR4302533.815905/1‑94 (MQ=60)
ACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCAC < SRR4302533.1179294/94‑1 (MQ=60)
ACTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGACAACGGCCAGTAACCACTCGCCAGTAAAACAGCAAGGCCCGCTC > SRR4302533.4598402/1‑94 (MQ=60)
CTGGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTTCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACA > SRR4302533.3220704/1‑94 (MQ=60)
GGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGC > SRR4302533.2655421/1‑94 (MQ=60)
GGC‑TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGC > SRR4302533.3580796/1‑94 (MQ=60)
CTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCC < SRR4302533.4329217/94‑1 (MQ=60)
CTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCC > SRR4302533.1764579/1‑94 (MQ=60)
TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCA < SRR4302533.649193/94‑1 (MQ=60)
TTTTTTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCC > SRR4302533.5330241/1‑94 (MQ=60)
TTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAG < SRR4302533.5073211/94‑1 (MQ=60)
TTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGT < SRR4302533.2807970/94‑1 (MQ=60)
TTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTC < SRR4302533.5301643/94‑1 (MQ=60)
TTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTC < SRR4302533.2512132/94‑1 (MQ=60)
TTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTC < SRR4302533.140828/94‑1 (MQ=60)
TTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTC < SRR4302533.4220738/94‑1 (MQ=60)
TTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCG < SRR4302533.4064898/94‑1 (MQ=60)
TTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCG < SRR4302533.4697174/94‑1 (MQ=60)
TTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCG > SRR4302533.3543197/1‑94 (MQ=60)
TTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGCAAAACAGCACGGCCCGCACAGCCCAGTCG > SRR4302533.441003/1‑94 (MQ=60)
TTCACACTTTTGCGGCTCGGGTCGAGGGGATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCG > SRR4302533.2321743/1‑94 (MQ=60)
TCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCGAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCGG > SRR4302533.4116252/1‑94 (MQ=60)
|
CACCCACAATGTCAAAGCCTGTTTTTTAAATTTGAAATCGTTTGCTGAAATAATCTGCATTTTGTCGTTTATTCCGACACAACTGGCTTTTTTTCACACTTTTGCGGCTCGGGTCGAGGGTATTTCCATAGCCAACGTCCAGTAACCATTCGCCAGTAAAACAGCACGGCCCGCACAGCCCAGTCGG > NC_000913/2056157‑2056343
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
