Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,075,196 |
(G)5→4 |
coding (63/369 nt) |
yeeU → |
putative structural protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,075,192 | 0 | G | . | 99.5%
| 857.3
/ ‑3.4
| 189 | coding (59/369 nt) | yeeU | putative structural protein |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base . (97/91); total (98/91) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 217 total aligned reads displayed.
CCATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > NC_000913/2075100‑2075280
|
cATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtgg < 2:1812406/93‑1 (MQ=255)
cATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCtggtgg < 1:5860193/93‑1 (MQ=255)
aTTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggg < 1:143074/93‑1 (MQ=255)
tCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTCCCCGACGACAATCACGACCGCCCCTGGTggggc < 1:915372/93‑2 (MQ=255)
ttAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTggggctg > 2:1833937/1‑90 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc > 2:2830971/1‑93 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc > 2:1441350/1‑93 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc < 1:6186470/93‑1 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc < 2:758412/93‑1 (MQ=255)
gCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGccc > 1:568277/1‑93 (MQ=255)
ccGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGcccg > 2:207127/1‑92 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg > 1:689258/1‑93 (MQ=255)
cGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTg > 1:2600534/1‑93 (MQ=255)
gATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGc > 1:1402293/1‑93 (MQ=255)
ttttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAc > 2:389425/1‑93 (MQ=255)
ttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCg < 2:4901028/93‑1 (MQ=255)
ttCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCCGCACCg > 1:100338/1‑93 (MQ=255)
tCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGt < 1:3223756/93‑1 (MQ=255)
cTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTg < 1:3008418/93‑1 (MQ=255)
cTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTg > 2:4160155/1‑93 (MQ=255)
tGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGGCCTGCACCGTGa > 2:5688113/1‑93 (MQ=255)
tGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGa > 2:6077320/1‑93 (MQ=255)
gTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAc < 2:2878504/93‑1 (MQ=255)
gTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAc > 2:3426025/1‑93 (MQ=255)
tAAGGCTTTTATCGTGTCAGACACCCTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑CGGGCTGCACTGAACCGCGAcc > 2:6216278/1‑92 (MQ=255)
tAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACg > 2:3511602/1‑93 (MQ=255)
tAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACg > 2:160291/1‑93 (MQ=255)
agtaTTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGATGCCCTGCACCGTGACGcc < 2:276464/90‑1 (MQ=255)
aGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGcc > 2:2439697/1‑93 (MQ=255)
aGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGcc > 1:5830923/1‑93 (MQ=255)
ggATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGccc < 1:1561506/93‑1 (MQ=255)
ggATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGccc < 2:3357418/93‑1 (MQ=255)
tttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGtt > 1:3310708/1‑93 (MQ=255)
tttATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGACCTGtt > 1:5493318/1‑93 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGGCCTGCACCGTGACGCCCTGTTTc > 1:110427/1‑93 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc > 2:3943952/1‑93 (MQ=255)
tATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc < 1:5624600/93‑1 (MQ=255)
tATCGCGTCAGCCACCCTCCCCGGGACAACACTTCCCGACAACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTc < 2:1213007/93‑1 (MQ=255)
aTCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCg > 1:3852644/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgggg > 1:2477847/1‑93 (MQ=255)
gtgtCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCgggg > 1:1766782/1‑93 (MQ=255)
ggtCAGACACCCTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGc < 2:1109617/92‑1 (MQ=255)
cgccAGCCACACCCCCCGGGACAACACTTCCCGACGACAACCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGc < 1:1313723/90‑1 (MQ=255)
tCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCAc > 1:3592595/1‑93 (MQ=255)
tCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGCAAAGCCCTGATTCAGGGCAc > 1:3709829/1‑93 (MQ=255)
cAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACg < 2:506976/93‑1 (MQ=255)
cAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACg > 1:4117192/1‑93 (MQ=255)
cAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACAACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGCCGCCCTGTTTCGGGGCACg > 1:1480879/1‑93 (MQ=255)
aGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGAACGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGt > 1:4442042/1‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc < 2:1881405/93‑1 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:4250122/1‑93 (MQ=255)
gACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGACCTGCACCGTGACGCCCTGTTTCGGGGCACGTc > 1:5428427/1‑93 (MQ=255)
acacacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCt > 1:449744/1‑93 (MQ=255)
cacTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGt < 1:954633/93‑1 (MQ=255)
acTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTg > 2:5260308/1‑93 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGc > 1:2948554/1‑93 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGc < 2:2674218/93‑1 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGc > 1:1317284/1‑93 (MQ=255)
cTCCCCGGGACAACACTTCCCGACGACAATCAAGACAGCCCCTGGT‑GGGGCTGCCCTGCACCGCGACGGGCTGTTTCGGGGGACGTGTggggg > 2:1629151/1‑90 (MQ=255)
tCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGcg > 2:1262725/1‑92 (MQ=255)
ccccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCag < 1:2763093/93‑1 (MQ=255)
cccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagg < 1:6275677/93‑1 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga > 1:3046943/1‑93 (MQ=255)
ccGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTCGGGGCACGTCTGGTGCagga > 2:152930/1‑93 (MQ=255)
cGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggag < 2:1933248/93‑1 (MQ=255)
cGGGACAACACTGCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCaggag < 2:3899770/93‑1 (MQ=255)
ggACAACACTTCCCGACGACAATCACGACCGCCCCTCGT‑GGGGCTGCCCTGCAACGTGACGCCCTGTTTCCGGGCACGCCTGGCGCAGGAggg > 1:809130/1‑93 (MQ=255)
gACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGt < 1:6005404/93‑1 (MQ=255)
caacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTaa < 1:2850535/93‑1 (MQ=255)
caacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTaa > 1:2033236/1‑93 (MQ=255)
caacaCTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGaa > 1:723113/1‑93 (MQ=255)
acacTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAcc < 1:5143487/93‑1 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGtt < 1:4040626/93‑1 (MQ=255)
ttCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGtt > 2:2492716/1‑93 (MQ=255)
acgacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTa > 2:3744015/1‑93 (MQ=255)
acgacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTa < 1:2874502/93‑1 (MQ=255)
acgacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTa > 2:6186505/1‑93 (MQ=255)
gacAATCACGCCCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAcc < 2:3610656/93‑1 (MQ=255)
gacAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAcc < 1:320672/93‑1 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt > 2:869498/1‑93 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCt > 2:2701628/1‑93 (MQ=255)
acAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCCGTTTCGGGGCACGGCTGGTGCAGGACGGGAACCGGTTGGAtttact > 2:4369308/1‑89 (MQ=255)
cAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCtt < 1:2348287/93‑1 (MQ=255)
aaTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTg < 1:309262/93‑1 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGc > 1:484445/1‑93 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGc < 2:3096459/93‑1 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGc > 1:5934086/1‑93 (MQ=255)
aTCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGc > 1:5451726/1‑93 (MQ=255)
gACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGAcc < 1:4611909/93‑1 (MQ=255)
ccGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACcgc < 2:1150980/93‑1 (MQ=255)
gCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGGACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGACGACCgcgc > 2:1747624/1‑93 (MQ=255)
gCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCACTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCgcgc < 1:1803258/93‑1 (MQ=255)
ccccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGcc > 1:4229520/1‑93 (MQ=255)
cccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCg > 1:1894926/1‑93 (MQ=255)
cccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCg > 1:5237576/1‑93 (MQ=255)
ccTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCgg < 2:1007809/93‑1 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGt < 2:2213970/93‑1 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCCCGCCGGt > 2:4969434/1‑93 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCCTTACCTTGACGAGCGCGCCGGt > 2:544616/1‑93 (MQ=255)
cTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGCCCGCGCCGGt > 1:4970172/1‑93 (MQ=39)
|
CCATTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > NC_000913/2075100‑2075280
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > NC_000913/2075103‑2075288
|
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGC < SRR4302533.5545867/94‑1 (MQ=60)
CTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTG > SRR4302533.4224177/1‑94 (MQ=60)
CTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTG < SRR4302533.4195278/94‑1 (MQ=60)
TAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCC > SRR4302533.1891923/1‑94 (MQ=60)
TAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCC > SRR4302533.1344518/1‑94 (MQ=60)
AGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCC > SRR4302533.571637/1‑94 (MQ=60)
AGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCC > SRR4302533.2502361/1‑94 (MQ=60)
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCT > SRR4302533.1954903/1‑94 (MQ=60)
GCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCT < SRR4302533.6223606/94‑1 (MQ=60)
CCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTG < SRR4302533.2884296/94‑1 (MQ=60)
CCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTG > SRR4302533.693334/1‑94 (MQ=60)
CCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTG > SRR4302533.2616512/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC > SRR4302533.1410752/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGC > SRR4302533.6321023/1‑94 (MQ=60)
CGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCCGC > SRR4302533.1806748/1‑94 (MQ=60)
GATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCA < SRR4302533.2969312/94‑1 (MQ=60)
ATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCAC < SRR4302533.1439716/94‑1 (MQ=60)
TTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCCGCACCG > SRR4302533.100964/1‑94 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG < SRR4302533.5257766/94‑1 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG < SRR4302533.3227386/94‑1 (MQ=60)
TCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTG < SRR4302533.3243634/94‑1 (MQ=60)
CTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGA < SRR4302533.3026822/94‑1 (MQ=60)
CTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGA > SRR4302533.2963376/1‑94 (MQ=60)
CTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGA > SRR4302533.4421978/1‑94 (MQ=60)
AAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCC > SRR4302533.5866166/1‑94 (MQ=60)
AGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGGCCTGCACCGTGACGCCC > SRR4302533.6275675/1‑94 (MQ=60)
GGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCT < SRR4302533.3152705/94‑1 (MQ=60)
GGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCT < SRR4302533.1570909/94‑1 (MQ=60)
GGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCT < SRR4302533.1280987/94‑1 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTT > SRR4302533.3331150/1‑94 (MQ=60)
TTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGACCTGTT > SRR4302533.5526454/1‑94 (MQ=60)
TTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGGCCTGCACCGTGACGCCCTGTTTC > SRR4302533.111128/1‑94 (MQ=60)
TTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTC > SRR4302533.309211/1‑94 (MQ=60)
TTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCCTGACGCCCTGTTTC > SRR4302533.5440676/1‑94 (MQ=60)
TATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCG < SRR4302533.5658596/94‑1 (MQ=60)
TATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCG > SRR4302533.3876173/1‑94 (MQ=60)
ATCGTTTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGG < SRR4302533.795309/94‑1 (MQ=60)
ATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCCG > SRR4302533.4126201/1‑94 (MQ=60)
TCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑TGGGCTGCCCTGCACCGTGGCGCCCTGTTTCGGG > SRR4302533.6105120/1‑94 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCTCCGTGACGCCCTGCTTCGGGG > SRR4302533.372404/1‑94 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGG > SRR4302533.1777540/1‑94 (MQ=60)
CGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGG > SRR4302533.2493131/1‑94 (MQ=60)
GTGTCAGACCCACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGC < SRR4302533.3053104/94‑1 (MQ=60)
cgccagcCACACCCCCCGGGACAACACTTCCCGACGACAACCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCA < SRR4302533.1321606/87‑1 (MQ=60)
GTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCAC > SRR4302533.3614706/1‑94 (MQ=60)
GTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGCAAAGCCCTGATTCAGGGCAC > SRR4302533.3732612/1‑94 (MQ=60)
TCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACG > SRR4302533.4142201/1‑94 (MQ=60)
TCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACG > SRR4302533.4516019/1‑94 (MQ=60)
TCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACAACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGCCGCCCTGTTTCGGGGCACG > SRR4302533.1489822/1‑94 (MQ=60)
CAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGAACGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGT > SRR4302533.4468900/1‑94 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302533.4275767/1‑94 (MQ=60)
AGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGACCTGCACCGTGACGCCCTGTTTCGGGGCACGTC > SRR4302533.5461120/1‑94 (MQ=60)
GACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCT > SRR4302533.452432/1‑94 (MQ=60)
ACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGT < SRR4302533.1323183/94‑1 (MQ=60)
CACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTG < SRR4302533.960239/94‑1 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGC > SRR4302533.1325187/1‑94 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGC > SRR4302533.2966588/1‑94 (MQ=60)
ACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGC > SRR4302533.2410959/1‑94 (MQ=60)
CTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCA > SRR4302533.5472978/1‑94 (MQ=60)
CCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGG > SRR4302533.3250083/1‑94 (MQ=60)
CCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGG < SRR4302533.2780031/94‑1 (MQ=60)
CCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGA < SRR4302533.6313151/94‑1 (MQ=60)
CCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGA > SRR4302533.3065597/1‑94 (MQ=60)
CCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGA > SRR4302533.2908659/1‑94 (MQ=60)
CCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGAAGCCCTGTTTCGGGGCACGTCTGGTGCAGGAG > SRR4302533.2725825/1‑94 (MQ=60)
CGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGG < SRR4302533.876319/94‑1 (MQ=60)
GGGACAACACTTCCCGACGACAATCACGACCGCCCCTCGT‑GGGGCTGCCCTGCAACGTGACGCCCTGTTTCCGGGCACGCCTGGCGCAGGAGGG > SRR4302533.813880/1‑94 (MQ=60)
GACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTA > SRR4302533.1482968/1‑94 (MQ=60)
GACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTA < SRR4302533.6041792/94‑1 (MQ=60)
ACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAA > SRR4302533.2045780/1‑94 (MQ=60)
ACAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAA > SRR4302533.727389/1‑94 (MQ=60)
CAACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAAC < SRR4302533.2868073/94‑1 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACC < SRR4302533.3306603/94‑1 (MQ=60)
AACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACC < SRR4302533.6163301/94‑1 (MQ=60)
ACACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCG < SRR4302533.5174572/94‑1 (MQ=60)
CACTTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGG < SRR4302533.4644757/94‑1 (MQ=60)
TTCCCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTG < SRR4302533.4065220/94‑1 (MQ=60)
CCGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCAT < SRR4302533.5698867/94‑1 (MQ=60)
CGACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATT < SRR4302533.4906398/94‑1 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTA > SRR4302533.4060325/1‑94 (MQ=60)
GACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTA < SRR4302533.5869539/94‑1 (MQ=60)
ACGACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTAC < SRR4302533.2892187/94‑1 (MQ=60)
GACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCT < SRR4302533.322632/94‑1 (MQ=60)
ACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT < SRR4302533.5925167/94‑1 (MQ=60)
ACAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTT < SRR4302533.4273997/94‑1 (MQ=60)
CAATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTG < SRR4302533.2362816/94‑1 (MQ=60)
CAACCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTG < SRR4302533.906212/94‑1 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302533.487341/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302533.5969960/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC < SRR4302533.1416067/94‑1 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC < SRR4302533.311156/94‑1 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGC > SRR4302533.5484567/1‑94 (MQ=60)
AATCACGACCGCCCCTGGT‑GGGGCTGCCCTGAACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGC > SRR4302533.5538143/1‑94 (MQ=60)
ATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCC < SRR4302533.551633/94‑1 (MQ=60)
ATCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCC < SRR4302533.4897011/94‑1 (MQ=60)
TCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCG < SRR4302533.5076892/94‑1 (MQ=60)
TCACGACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCG > SRR4302533.4622703/1‑94 (MQ=60)
GACCGCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCG < SRR4302533.4639852/94‑1 (MQ=60)
GCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCC > SRR4302533.939057/1‑94 (MQ=60)
GCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCC > SRR4302533.4255089/1‑94 (MQ=60)
GCCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCACTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCC < SRR4302533.1814235/94‑1 (MQ=60)
CCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCG > SRR4302533.5269065/1‑94 (MQ=60)
CCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCG < SRR4302533.3433955/94‑1 (MQ=60)
CCCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCG > SRR4302533.1906493/1‑94 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGCCCGCGCCGG > SRR4302533.600739/1‑94 (MQ=60)
CCCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGG > SRR4302533.2349774/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > SRR4302533.1070935/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT > SRR4302533.724239/1‑94 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT < SRR4302533.2841769/94‑1 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGT < SRR4302533.2206035/94‑1 (MQ=60)
CCTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGGAACCGGTTGCATTACCTTGCCGCCCGCGCCGGT > SRR4302533.5000307/1‑94 (MQ=60)
CTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTA > SRR4302533.2717999/1‑94 (MQ=60)
CTGGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTA < SRR4302533.1533491/94‑1 (MQ=60)
GGT‑GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATC < SRR4302533.1596270/94‑1 (MQ=60)
TGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG > SRR4302533.5033402/1‑94 (MQ=60)
GTGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAG < SRR4302533.5670539/94‑1 (MQ=60)
GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGA < SRR4302533.1725850/94‑1 (MQ=60)
GGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGA > SRR4302533.713203/1‑94 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302533.5508335/94‑1 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302533.2035450/94‑1 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302533.4717745/94‑1 (MQ=60)
GGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAG < SRR4302533.6272232/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > SRR4302533.2118165/1‑94 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG < SRR4302533.275644/94‑1 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > SRR4302533.1986411/1‑94 (MQ=60)
GGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG < SRR4302533.2928255/94‑1 (MQ=60)
|
TTCTTAGCCGATTTTCTGTAAGGATTTTATCGTGTCAGACACACTCCCCGGGACAACACTTCCCGACGACAATCACGACCGCCCCTGGTGGGGGCTGCCCTGCACCGTGACGCCCTGTTTCGGGGCACGTCTGGTGCAGGAGGGTAACCGGTTGCATTACCTTGCCGACCGCGCCGGTATCAGAGG > NC_000913/2075103‑2075288
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
