Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,092,192 |
A→G |
T235A (ACC→GCC) |
b2022 → |
imidazoleglycerolphosphate dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,092,192 | 0 | A | G | 99.5%
| 662.8
/ NA
| 206 | T235A (ACC→GCC) | b2022 | imidazoleglycerolphosphate dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (108/97); minor base T (0/1); total (108/98) |
| Fisher's exact test for biased strand distribution p-value = 4.76e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 214 total aligned reads displayed.
TGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAA > NC_000913/2092103‑2092281
|
tGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGTCCTCTATATCGACGATCACCACACCGTCGAAGATGCCg > 2:81705/1‑93 (MQ=255)
gATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCCCCACACCGTCGAAGATGCCGGc < 1:1893386/93‑1 (MQ=255)
gATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGc > 2:2486669/1‑93 (MQ=255)
aTCAGATCGCTGCCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGcc < 1:4323832/93‑1 (MQ=255)
aTCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGcc < 1:2656498/93‑1 (MQ=255)
tCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCt < 1:1360588/93‑1 (MQ=255)
tCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCt > 2:289926/1‑93 (MQ=255)
cAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTg > 1:3990785/1‑93 (MQ=255)
aGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTgg > 2:4800617/1‑93 (MQ=255)
aGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTgg < 2:606802/93‑1 (MQ=255)
aTCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCTACGATCACCACACCGTCGGAGATGCCGGACTGgcg > 2:2790718/1‑93 (MQ=255)
tCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGgcgc > 1:3447150/1‑93 (MQ=255)
cGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCt > 1:398319/1‑93 (MQ=255)
gCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTg < 2:4357580/93‑1 (MQ=255)
cTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTgg < 2:4837992/93‑1 (MQ=255)
cTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTgg < 2:5818460/93‑1 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTggg > 1:243453/1‑93 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTggg > 2:1382889/1‑93 (MQ=255)
tACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTggg > 1:5868825/1‑93 (MQ=255)
cccACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCg > 2:3868774/1‑93 (MQ=255)
aCGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAg > 1:504453/1‑93 (MQ=255)
cggcggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAgc < 1:749609/93‑1 (MQ=255)
ggcggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAgcg > 1:3051169/1‑93 (MQ=255)
ggTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTa > 2:4461950/1‑93 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa > 1:1917399/1‑93 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa < 2:102464/93‑1 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa > 2:3486905/1‑93 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa > 1:5437877/1‑93 (MQ=255)
gTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaa > 1:5329332/1‑93 (MQ=255)
tCCGCATGGAAATCAACGGCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTaaaaa < 1:1418324/93‑1 (MQ=255)
cGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATc > 1:4403012/1‑93 (MQ=255)
cGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCACTGGGCGAAGCGCTAAAAATc < 1:5793986/93‑1 (MQ=255)
cATGTAAATCAACTTCAAAGGCGACCTTTATAGCGGCGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGc < 2:4075856/93‑1 (MQ=255)
aTGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGcc > 2:5642640/1‑93 (MQ=255)
aTGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGcc > 1:2981911/1‑93 (MQ=255)
tGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGccc > 2:619285/1‑93 (MQ=255)
aaaTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCg < 1:1559840/93‑1 (MQ=255)
aaaTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCg > 2:3139976/1‑93 (MQ=255)
aaTCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACAGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCgg > 1:3386487/1‑93 (MQ=255)
tCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGAGCTGGGCGAAGCGCTAAAAATCGCCCTCGgag > 1:3756627/1‑93 (MQ=255)
aaCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGAc < 2:4555204/93‑1 (MQ=255)
aCGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACa < 2:5165832/93‑1 (MQ=255)
tCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGGGCTGGGCGGAGCGCTAAAAATCGCCCTCGGAGACAAAc > 1:3130164/1‑93 (MQ=255)
tCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAc < 2:1311836/93‑1 (MQ=255)
tCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAc > 1:63489/1‑93 (MQ=255)
tCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAc > 2:364307/1‑93 (MQ=255)
cAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcg < 2:4296684/93‑1 (MQ=255)
aaaGGCGACCTCTATATCGACTATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgc < 2:4990995/93‑1 (MQ=255)
aaaGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgc > 1:4745042/1‑93 (MQ=255)
aaaGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgc > 2:5950544/1‑93 (MQ=255)
aaGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAcgcg < 2:2575767/93‑1 (MQ=255)
aGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCgg < 2:4845375/93‑1 (MQ=255)
aGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCgg < 1:5516421/93‑1 (MQ=255)
ggCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCGTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGt < 1:204567/93‑1 (MQ=255)
ggCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGt < 1:1058462/93‑1 (MQ=255)
gCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTa < 1:2007936/93‑1 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt > 2:127864/1‑93 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt < 2:189560/93‑1 (MQ=255)
gACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAtt > 2:177658/1‑93 (MQ=255)
aCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAttt > 2:2134829/1‑93 (MQ=255)
aCCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAttt > 2:4132905/1‑93 (MQ=255)
ccTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTg > 1:1976139/1‑93 (MQ=255)
ccTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTg < 2:4091440/93‑1 (MQ=255)
tctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc < 1:2915722/93‑1 (MQ=255)
tctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc < 2:1174861/93‑1 (MQ=255)
tctATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGcc < 1:915398/93‑1 (MQ=255)
tataTCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGc > 1:4602435/1‑93 (MQ=255)
tataTCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGc > 2:338201/1‑93 (MQ=255)
atCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCttt > 2:4205409/1‑93 (MQ=255)
atCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCttt > 2:792735/1‑93 (MQ=255)
tCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTg > 1:2281407/1‑93 (MQ=255)
tCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTg > 1:1464251/1‑93 (MQ=255)
tCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTg > 1:6192879/1‑93 (MQ=255)
cgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGttt > 2:5209455/1‑93 (MQ=255)
cgaTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGttt < 1:386514/93‑1 (MQ=255)
aTCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtg < 2:3160058/93‑1 (MQ=255)
tCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtgt < 2:4905670/93‑1 (MQ=255)
caccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtgtg > 2:5289624/1‑93 (MQ=255)
caccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtgtg > 1:3170490/1‑93 (MQ=255)
caccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTtgtg < 1:1775091/93‑1 (MQ=255)
accacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGc > 2:1127710/1‑93 (MQ=255)
accacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGc > 2:896530/1‑93 (MQ=255)
accacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGc > 2:4593462/1‑93 (MQ=255)
accacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGc < 1:5092628/93‑1 (MQ=255)
ccacACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCt < 1:2345723/93‑1 (MQ=255)
acacCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAc > 1:5889950/1‑93 (MQ=255)
acacCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAc > 2:1413838/1‑93 (MQ=255)
cgccGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAACGCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAcc < 2:646634/91‑1 (MQ=255)
cacCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAcc < 1:4107822/93‑1 (MQ=255)
cacCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAcc < 2:5188858/93‑1 (MQ=255)
acCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCg > 2:2047036/1‑93 (MQ=255)
ccGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGa > 1:4948052/1‑93 (MQ=255)
cGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAt < 2:957376/93‑1 (MQ=255)
cGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCAAt < 1:6121914/93‑1 (MQ=255)
gTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATg > 1:3668908/1‑93 (MQ=255)
gTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATg < 2:2687144/93‑1 (MQ=255)
cGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGa > 2:1640484/1‑93 (MQ=255)
aaGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACg < 2:2742035/93‑1 (MQ=255)
aGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGa > 2:3427227/1‑93 (MQ=255)
gATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGaa < 1:4981335/93‑1 (MQ=255)
|
TGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAA > NC_000913/2092103‑2092281
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGC > NC_000913/2092099‑2092284
|
ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATG < SRR4302533.3872347/94‑1 (MQ=60)
TGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGC > SRR4302533.4881468/1‑94 (MQ=60)
TGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGC < SRR4302533.4538673/94‑1 (MQ=60)
GCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCC < SRR4302533.5111820/94‑1 (MQ=60)
CTGGATCAGATCGCTACCCACGGCGGTTTCCGCATAGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACAGCGTCGAAGATGCCG > SRR4302533.3201496/1‑94 (MQ=60)
GATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCCCCACACCGTCGAAGATGCCGGCC < SRR4302533.1904946/94‑1 (MQ=60)
ATCAGATCGCTGCCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT < SRR4302533.4349869/94‑1 (MQ=60)
ATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT > SRR4302533.689506/1‑94 (MQ=60)
ATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT > SRR4302533.4696707/1‑94 (MQ=60)
ATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCT < SRR4302533.2672816/94‑1 (MQ=60)
TCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTG < SRR4302533.1368762/94‑1 (MQ=60)
TCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTG > SRR4302533.4015089/1‑94 (MQ=60)
CAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATTCCGGCCTGG < SRR4302533.2968669/94‑1 (MQ=60)
AGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGC < SRR4302533.6177655/94‑1 (MQ=60)
ATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGC > SRR4302533.3468436/1‑94 (MQ=60)
ATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATAACCACACCGTCGAAGATGCCGGCCTGGCGC > SRR4302533.3468435/1‑94 (MQ=60)
TCNCNTNCCACGGCGGTTTCCNNCGAGAAAACAACGTCAAAGGCGACCTCTATATCGACGACCACCACACCGTCGAAGATGCCGGCCTGGCGCT < SRR4302533.2356067/94‑1 (MQ=60)
TCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCT > SRR4302533.400724/1‑94 (MQ=60)
CGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGCAGATGCCGGCCTGGacctg > SRR4302533.2518884/1‑89 (MQ=60)
GCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGG > SRR4302533.4143688/1‑94 (MQ=60)
CTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGG > SRR4302533.5904296/1‑94 (MQ=60)
CTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGG > SRR4302533.244962/1‑94 (MQ=60)
ACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCG > SRR4302533.1619272/1‑94 (MQ=60)
CCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAA > SRR4302533.4045017/1‑94 (MQ=60)
CACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAG > SRR4302533.507446/1‑94 (MQ=60)
ACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGC < SRR4302533.3890805/94‑1 (MQ=60)
CGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCG > SRR4302533.3069851/1‑94 (MQ=60)
CGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCG < SRR4302533.754024/94‑1 (MQ=60)
GGCTGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGC < SRR4302533.589489/94‑1 (MQ=60)
GGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGC < SRR4302533.6041268/94‑1 (MQ=60)
GGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGC < SRR4302533.5378346/94‑1 (MQ=60)
CGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTAGGCGAAGCGCTA > SRR4302533.1434866/1‑94 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGGGCAGCGCTAA > SRR4302533.2841874/1‑94 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAA < SRR4302533.2410392/94‑1 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAA > SRR4302533.5470630/1‑94 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAA > SRR4302533.1929106/1‑94 (MQ=60)
GGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAA > SRR4302533.5361271/1‑94 (MQ=60)
GGTTTCCGCAGGGAAATCAACGTCAAAGGCGACCTCTATATCGTCGATCACCACACCGTCGAAGATGCCGGCCCGGCGCTGGGCGAAGCGCTAA > SRR4302533.6342596/1‑94 (MQ=60)
TCCGCATGGAAATCAACGGCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAAT < SRR4302533.1426904/94‑1 (MQ=60)
CCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATC > SRR4302533.4429596/1‑94 (MQ=60)
CGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCACTGGGCGAAGCGCTAAAAATCG < SRR4302533.5828989/94‑1 (MQ=60)
CATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCC > SRR4302533.3000151/1‑94 (MQ=60)
ATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCC > SRR4302533.1474854/1‑94 (MQ=60)
ATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCC > SRR4302533.4353419/1‑94 (MQ=60)
TGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCT < SRR4302533.5054045/94‑1 (MQ=60)
TGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCT < SRR4302533.5080029/94‑1 (MQ=60)
TGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCT < SRR4302533.2030120/94‑1 (MQ=60)
TGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCT < SRR4302533.1813997/94‑1 (MQ=60)
GGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTC > SRR4302533.3575776/1‑94 (MQ=60)
AAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGG < SRR4302533.1569236/94‑1 (MQ=60)
AAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGG < SRR4302533.819105/94‑1 (MQ=60)
AAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACAGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGG > SRR4302533.3407396/1‑94 (MQ=60)
ATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAG < SRR4302533.5923984/94‑1 (MQ=60)
ATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGAGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAG > SRR4302533.3779653/1‑94 (MQ=60)
TCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGA < SRR4302533.3592107/94‑1 (MQ=60)
CGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAA < SRR4302533.3872008/94‑1 (MQ=60)
GTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGGGCTGGGCGGAGCGCTAAAAATCGCCCTCGGAGACAAAC > SRR4302533.3149411/1‑94 (MQ=60)
GTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAC < SRR4302533.1978974/94‑1 (MQ=60)
GTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAAC > SRR4302533.63904/1‑94 (MQ=60)
TCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACG < SRR4302533.2012574/94‑1 (MQ=60)
CAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGC > SRR4302533.4773811/1‑94 (MQ=60)
CAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGC < SRR4302533.3710971/94‑1 (MQ=60)
AGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGT < SRR4302533.5549726/94‑1 (MQ=60)
GGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCGTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTA < SRR4302533.205869/94‑1 (MQ=60)
GGCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTA < SRR4302533.1064687/94‑1 (MQ=60)
GCGACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTAT < SRR4302533.2020306/94‑1 (MQ=60)
GACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTT > SRR4302533.282042/1‑94 (MQ=60)
GACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTT > SRR4302533.4369036/1‑94 (MQ=60)
ACCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTG > SRR4302533.1988243/1‑94 (MQ=60)
CCTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGC > SRR4302533.3029901/1‑94 (MQ=60)
CTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCC > SRR4302533.1921062/1‑94 (MQ=60)
CTCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCC > SRR4302533.3385623/1‑94 (MQ=60)
TCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCG < SRR4302533.2933602/94‑1 (MQ=60)
TCTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCG < SRR4302533.920777/94‑1 (MQ=60)
CTATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGC > SRR4302533.4630318/1‑94 (MQ=60)
TATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCT < SRR4302533.5488553/94‑1 (MQ=60)
ATATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATAGCCCTCGGAGACAAACGCGGTATTTGCCGCTT > SRR4302533.5236976/1‑94 (MQ=60)
TATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTT < SRR4302533.257262/94‑1 (MQ=60)
ATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTG > SRR4302533.2295531/1‑94 (MQ=60)
ATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTG > SRR4302533.6230040/1‑94 (MQ=60)
ATCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTG > SRR4302533.1473076/1‑94 (MQ=60)
GCGACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGTCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGG < SRR4302533.3087198/94‑1 (MQ=60)
GACGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTT > SRR4302533.970164/1‑94 (MQ=60)
CGATCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTT < SRR4302533.388847/94‑1 (MQ=60)
TCACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTG > SRR4302533.3190007/1‑94 (MQ=60)
CACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGC < SRR4302533.1785902/94‑1 (MQ=60)
ACCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCT < SRR4302533.5123394/94‑1 (MQ=60)
CCACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTA < SRR4302533.2360242/94‑1 (MQ=60)
CACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAC > SRR4302533.5925532/1‑94 (MQ=60)
CACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAC < SRR4302533.4520172/94‑1 (MQ=60)
CACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTAC < SRR4302533.4978284/94‑1 (MQ=60)
ACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACC > SRR4302533.4897881/1‑94 (MQ=60)
ACACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACC < SRR4302533.1426540/94‑1 (MQ=60)
CACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCG < SRR4302533.4132798/94‑1 (MQ=60)
CACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAAACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCG < SRR4302533.4012884/94‑1 (MQ=60)
ACCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGA > SRR4302533.4978013/1‑94 (MQ=60)
CCGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGAT > SRR4302533.5718587/1‑94 (MQ=60)
CGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATG > SRR4302533.3691458/1‑94 (MQ=60)
CGTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCAATG < SRR4302533.6158827/94‑1 (MQ=60)
GTCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGG > SRR4302533.2188283/1‑94 (MQ=60)
TCGAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGA < SRR4302533.3181112/94‑1 (MQ=60)
GAAGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACG < SRR4302533.5355601/94‑1 (MQ=60)
AGATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAA > SRR4302533.6163123/1‑94 (MQ=60)
GATGCCGTCCTGGCGCTGGGCGAAGCGCTAAAAGCCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302533.452648/94‑1 (MQ=60)
GATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302533.5011533/94‑1 (MQ=60)
GATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302533.1949642/94‑1 (MQ=60)
GATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAAT < SRR4302533.1170141/94‑1 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG < SRR4302533.5938307/94‑1 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG > SRR4302533.2753965/1‑94 (MQ=60)
ATGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATG > SRR4302533.4121178/1‑94 (MQ=60)
TGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGC < SRR4302533.1837028/94‑1 (MQ=60)
TGCCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGC < SRR4302533.4217115/94‑1 (MQ=60)
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ATGCTGGATCAGATCGCTACCCACGGCGGTTTCCGCATGGAAATCAACGTCAAAGGCGACCTCTATATCGACGATCACCACACCGTCGAAGATACCGGCCTGGCGCTGGGCGAAGCGCTAAAAATCGCCCTCGGAGACAAACGCGGTATTTGCCGCTTTGGTTTTGTGCTACCGATGGACGAATGC > NC_000913/2092099‑2092284
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
