Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,265,885 |
A→G |
S13G (AGC→GGC) |
yeiR → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,265,885 | 0 | A | G | 100.0%
| 639.1
/ NA
| 199 | S13G (AGC→GGC) | yeiR | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/97); total (102/97) |
Only 100 of 227 total aligned reads displayed.
TTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTC > NC_000913/2265795‑2265974
|
ttttttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCggcggc > 2:5774530/1‑93 (MQ=255)
ttttttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCggcggc > 1:1590344/1‑93 (MQ=255)
ttttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTcggcggcgg > 1:1012267/1‑93 (MQ=255)
ttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGa < 1:750578/93‑1 (MQ=255)
ttAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGa < 2:1158296/93‑1 (MQ=255)
aGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGaaa > 1:5495015/1‑93 (MQ=255)
aGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGaaa > 1:2927686/1‑93 (MQ=255)
gCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGGCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGaaaa > 1:5531239/1‑93 (MQ=255)
ccAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAc < 1:3387643/93‑1 (MQ=255)
cAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAcc > 1:5547875/1‑93 (MQ=255)
cAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAcc > 1:2592601/1‑93 (MQ=255)
aGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCa > 2:5555972/1‑93 (MQ=255)
aGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCa > 2:4410330/1‑93 (MQ=255)
ggATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGTGGGAAAACCAc > 1:5050755/1‑93 (MQ=255)
ggATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCAc > 2:4657636/1‑93 (MQ=255)
ggATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCAc < 2:1012101/93‑1 (MQ=255)
gATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACg > 2:1450614/1‑93 (MQ=255)
gATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACg > 1:5777848/1‑93 (MQ=255)
aTTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGt > 2:4061238/1‑93 (MQ=255)
aTTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGt < 1:5352906/93‑1 (MQ=255)
ttAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCGCCGGTTTTCTCGGCGGCGGGAAAACCACGTc < 2:3427575/93‑1 (MQ=255)
ttAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTc > 2:6270985/1‑93 (MQ=255)
aaCGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGa > 1:4762471/1‑93 (MQ=255)
aCGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAt > 1:3488057/1‑93 (MQ=255)
gCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGGAAACCACGTCGAttc > 1:3330444/1‑93 (MQ=255)
gCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttc > 2:3347808/1‑93 (MQ=255)
gCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttc > 1:1660381/1‑93 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttctt > 2:5024353/1‑93 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttctt < 1:4094032/93‑1 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTAGAttctt > 1:2339794/1‑93 (MQ=255)
tCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGGCGAttctt > 2:3928300/1‑93 (MQ=255)
cAGTTACCTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAttcttc > 2:888303/1‑93 (MQ=255)
aGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCa > 2:1607115/1‑93 (MQ=255)
ttAACGGACCAGAGTAGTGCGGAGCCGTTGTGACCAGGACCACCCTCATCACCGATTTTCGCGGCGGCGGGAAAGCCACGTCGATTCTTCATc < 2:2519691/93‑1 (MQ=255)
taaccTTACAAGAGTATTGCGGAGCCTTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATc < 1:4373955/89‑1 (MQ=255)
tAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCt < 2:222840/93‑1 (MQ=255)
tAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCt > 2:2730233/1‑93 (MQ=255)
tAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCt < 1:703494/93‑1 (MQ=255)
cTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGtt > 1:3986010/1‑93 (MQ=255)
ttACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTa > 1:1216309/1‑93 (MQ=255)
ttACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTa < 2:5866358/93‑1 (MQ=255)
ttACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTa < 2:2885350/93‑1 (MQ=255)
ttACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTa > 1:1005074/1‑93 (MQ=255)
aCCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGc > 2:683979/1‑93 (MQ=255)
aCCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGc > 1:2775805/1‑93 (MQ=255)
ccAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATc > 2:168572/1‑85 (MQ=255)
agagTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCa < 2:5981479/93‑1 (MQ=255)
gagTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCAt < 1:5948548/93‑1 (MQ=255)
gTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATaa > 1:831236/1‑93 (MQ=255)
gTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATaa > 1:2258675/1‑93 (MQ=255)
aTTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAg > 1:1704413/1‑93 (MQ=255)
gCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATc < 2:4006544/93‑1 (MQ=255)
ggAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATccc < 2:1236008/93‑1 (MQ=255)
gAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCa > 2:5497952/1‑93 (MQ=255)
gAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCa < 2:2337616/93‑1 (MQ=255)
gAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCa > 1:4461491/1‑93 (MQ=255)
aGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCaa < 1:3298388/93‑1 (MQ=255)
gCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAc < 1:990286/93‑1 (MQ=255)
gCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAc > 2:5282453/1‑93 (MQ=255)
gCCGTTGGACCCAGGACCAACCTCATCCCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAc < 1:4482474/93‑1 (MQ=255)
ccGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACg < 1:1901475/93‑1 (MQ=255)
ccGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACg < 1:3858012/93‑1 (MQ=255)
cGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGa > 2:5411216/1‑93 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGTCCATAAAGATTCCAACGaa > 2:6170189/1‑93 (MQ=255)
gTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaa > 2:4460446/1‑93 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaa > 1:4420235/1‑93 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaa < 1:6061901/93‑1 (MQ=255)
ttGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGaaa > 1:176550/1‑93 (MQ=255)
aCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATgg > 2:2290132/1‑93 (MQ=255)
aCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATgg < 1:5838850/93‑1 (MQ=255)
aCCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCCTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATgg < 1:4739817/93‑1 (MQ=255)
ccAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATggg > 1:1225336/1‑93 (MQ=255)
cAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGc > 2:3545897/1‑93 (MQ=255)
cAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGc < 1:5574698/93‑1 (MQ=255)
aGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCg < 1:1265801/93‑1 (MQ=255)
ggACCAACCTCATCACGGGTTTTCTCGGCGGCGGAAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCgg < 1:2391196/93‑1 (MQ=255)
ggACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCgg < 2:907719/93‑1 (MQ=255)
ggACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCgg < 1:1528333/93‑1 (MQ=255)
gACCACCCTCATCCCGGGTTTGCTCGGCGGCGGAAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGt < 2:4361388/93‑1 (MQ=255)
gACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGt < 1:4023841/93‑1 (MQ=255)
gACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGt > 2:4542771/1‑93 (MQ=255)
ccAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTAc < 2:2780815/93‑1 (MQ=255)
ccAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTAc > 1:4069176/1‑93 (MQ=255)
cacccTCATCACCGGTTTTCTCGGCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACt < 1:3815812/90‑1 (MQ=255)
cAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACt > 2:3737470/1‑93 (MQ=255)
aaCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTg < 1:5196101/93‑1 (MQ=255)
aaCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTg < 2:4130075/93‑1 (MQ=255)
aCCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTgg < 2:1984833/93‑1 (MQ=255)
ccTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGt > 1:4624817/1‑93 (MQ=255)
atcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAAt > 2:3209113/1‑93 (MQ=255)
tcaCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATg < 1:5163107/93‑1 (MQ=255)
taCCGGTTTTCTCGGGGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGAACCCAACGAAAAATGAGAGGTACTGGTTAATgg > 2:3047806/2‑92 (MQ=255)
ggTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAAttt > 2:4905353/1‑93 (MQ=255)
gTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTg > 1:2908744/1‑93 (MQ=255)
ttttCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTgg < 2:3795662/93‑1 (MQ=255)
tttCTCGGCGGCGGGAATCCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTggg < 1:3150661/93‑1 (MQ=255)
tctcGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGa < 2:4826547/93‑1 (MQ=255)
tcGGCGGCGGGAAATCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAg < 2:4220136/93‑1 (MQ=255)
tcGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAg > 1:2511054/1‑93 (MQ=255)
ggcggcGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTc < 2:5615109/93‑1 (MQ=255)
|
TTTTTTAGCCAGGATTAACGCTCAGTTAACTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTC > NC_000913/2265795‑2265974
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGG > NC_000913/2265793‑2265976
|
CCTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGG < SRR4302533.3480319/94‑1 (MQ=60)
CCTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGG > SRR4302533.1569718/1‑94 (MQ=60)
CTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGC < SRR4302533.5169466/94‑1 (MQ=60)
CTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGC > SRR4302533.1599963/1‑94 (MQ=60)
TTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGG > SRR4302533.2484270/1‑94 (MQ=60)
TTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGG > SRR4302533.1018190/1‑94 (MQ=60)
TTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAA < SRR4302533.754997/94‑1 (MQ=60)
TAGTCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAA < SRR4302533.4055713/94‑1 (MQ=60)
TAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAA > SRR4302533.2945599/1‑94 (MQ=60)
TAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAA > SRR4302533.5528162/1‑94 (MQ=60)
TAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAA > SRR4302533.2801465/1‑94 (MQ=60)
AGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGGCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAA > SRR4302533.5564634/1‑94 (MQ=60)
GCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAC < SRR4302533.1005498/94‑1 (MQ=60)
GCCAGGATTAACGCTCAGTTAA‑CTTACAAGAGTATTGCGGAGCCGTTCTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAC < SRR4302533.4111744/94‑1 (MQ=60)
GCCAGGATTAACGCTCAGTTAA‑CGTCCCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAAC < SRR4302533.5226621/94‑1 (MQ=60)
CCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACC < SRR4302533.3408561/94‑1 (MQ=60)
CCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACC > SRR4302533.2608533/1‑94 (MQ=60)
CCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACC > SRR4302533.5581380/1‑94 (MQ=60)
CAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCC > SRR4302533.5740352/1‑94 (MQ=60)
AGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGTGGGAAAACCAC > SRR4302533.5081299/1‑94 (MQ=60)
AGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGGAAACCAC > SRR4302533.1466233/1‑94 (MQ=60)
AGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCAC < SRR4302533.5497554/94‑1 (MQ=60)
GGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACG > SRR4302533.5812748/1‑94 (MQ=60)
GGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACG > SRR4302533.5909469/1‑94 (MQ=60)
GGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACG > SRR4302533.739314/1‑94 (MQ=60)
ATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTC < SRR4302533.5385032/94‑1 (MQ=60)
TAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGA > SRR4302533.4791356/1‑94 (MQ=60)
AACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGAT > SRR4302533.3509566/1‑94 (MQ=60)
CGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGGAAACCACGTCGATTC > SRR4302533.3351030/1‑94 (MQ=60)
CGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTC > SRR4302533.1670420/1‑94 (MQ=60)
CGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGCCGATTC > SRR4302533.696379/1‑94 (MQ=60)
GCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCT < SRR4302533.2595128/94‑1 (MQ=60)
CTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTT > SRR4302533.3347869/1‑94 (MQ=60)
CTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTAGATTCTT > SRR4302533.2354283/1‑94 (MQ=60)
TCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTC > SRR4302533.777458/1‑94 (MQ=60)
TCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTC < SRR4302533.4118954/94‑1 (MQ=60)
TCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTC > SRR4302533.1261310/1‑94 (MQ=60)
CATTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCA < SRR4302533.2660012/94‑1 (MQ=60)
AGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCAT > SRR4302533.3067692/1‑94 (MQ=60)
GTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATC > SRR4302533.6091171/1‑94 (MQ=60)
gctgtaTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCT < SRR4302533.169638/88‑1 (MQ=60)
TAACCTTACAAGAGTATTGCGGAGCCTTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCT < SRR4302533.4400355/94‑1 (MQ=60)
TAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTG < SRR4302533.851538/94‑1 (MQ=60)
TAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTG < SRR4302533.707654/94‑1 (MQ=60)
TAA‑CTCACCAGTGTATGGCGGAGCCGTTTGGACCAGCACCACCCTCATCACCGGTTTTCTCGGCGGGGGAAAACCCACGTCGATTCTTCATCTG < SRR4302533.2247009/94‑1 (MQ=32)
A‑CTTACCAGAGTATTGCGGAGCCGTTTTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTT < SRR4302533.4531405/94‑1 (MQ=60)
A‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTT > SRR4302533.5129602/1‑94 (MQ=60)
A‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTT > SRR4302533.4010286/1‑94 (MQ=60)
CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGACAACCACGTCGATTCTTCATCTGTTA > SRR4302533.4042753/1‑94 (MQ=60)
CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTA > SRR4302533.1010952/1‑94 (MQ=60)
CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTA > SRR4302533.1223615/1‑94 (MQ=60)
TTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAG < SRR4302533.4762079/94‑1 (MQ=60)
TACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGC > SRR4302533.2792852/1‑94 (MQ=60)
TACAAGAGTATTGCGGAGCCGTGGTGACCAGGACCAACCTCATCACCGGTTTTCGCGGGGGCGTGAAAACCACGTCGATTCTTCATCTGTTAGC < SRR4302533.4310791/94‑1 (MQ=60)
ACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCC > SRR4302533.3958356/1‑94 (MQ=60)
CAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCA > SRR4302533.3508225/1‑94 (MQ=60)
CAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCA > SRR4302533.5035358/1‑94 (MQ=60)
GAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATA < SRR4302533.5984526/94‑1 (MQ=60)
GAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATA < SRR4302533.1060263/94‑1 (MQ=60)
GAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATA > SRR4302533.1867451/1‑94 (MQ=60)
AGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAA > SRR4302533.2272650/1‑94 (MQ=60)
AGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAA > SRR4302533.836108/1‑94 (MQ=60)
TATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAG > SRR4302533.1714737/1‑94 (MQ=60)
ATGGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGA < SRR4302533.5336640/94‑1 (MQ=60)
TGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGTGGAAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATC < SRR4302533.3394500/94‑1 (MQ=60)
TGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATC < SRR4302533.1234145/94‑1 (MQ=60)
CGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCC < SRR4302533.3561680/94‑1 (MQ=60)
CGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCC > SRR4302533.4142292/1‑94 (MQ=60)
GGAGCCGTTGTGACCAGGACCACCCTCATCACCGGTTTTCTCGGCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCA < SRR4302533.23732/94‑1 (MQ=60)
GGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCA > SRR4302533.3268557/1‑94 (MQ=60)
GGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCA > SRR4302533.4488476/1‑94 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCCCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC < SRR4302533.1231236/94‑1 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC < SRR4302533.3318743/94‑1 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC < SRR4302533.86180/94‑1 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC > SRR4302533.5824861/1‑94 (MQ=60)
AGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAAC > SRR4302533.6133432/1‑94 (MQ=60)
gccgttggacCCAGGACCAACCTCATCCCCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACG < SRR4302533.4509618/84‑1 (MQ=60)
GCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACG < SRR4302533.996078/94‑1 (MQ=60)
GCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACG < SRR4302533.2957576/94‑1 (MQ=60)
GCCGTTGTGAACAGGACCAACCTCATCACCGGTTTTCTCGGCGGAGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACG < SRR4302533.2933669/94‑1 (MQ=60)
CCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGA < SRR4302533.1913083/94‑1 (MQ=60)
CCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGA < SRR4302533.3881569/94‑1 (MQ=60)
GTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAA > SRR4302533.4446962/1‑94 (MQ=60)
GTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAA > SRR4302533.177660/1‑94 (MQ=60)
TTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAA > SRR4302533.2598525/1‑94 (MQ=60)
TTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAA < SRR4302533.6098597/94‑1 (MQ=60)
TGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAA > SRR4302533.1749631/1‑94 (MQ=60)
TGACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATG > SRR4302533.477890/1‑94 (MQ=60)
ACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGG > SRR4302533.1232679/1‑94 (MQ=60)
ACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGG < SRR4302533.5874150/94‑1 (MQ=60)
ACCAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCCTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGG < SRR4302533.4768556/94‑1 (MQ=60)
CAGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCG < SRR4302533.5608386/94‑1 (MQ=60)
AGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGG > SRR4302533.4476337/1‑94 (MQ=60)
AGGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGG < SRR4302533.1273375/94‑1 (MQ=60)
GGACCAACCTCATCACGGGTTTTCTCGGCGGCGGAAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGT < SRR4302533.2405960/94‑1 (MQ=60)
GGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGT < SRR4302533.1537529/94‑1 (MQ=60)
GGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGT < SRR4302533.3845638/94‑1 (MQ=60)
GGACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGT < SRR4302533.4508171/94‑1 (MQ=60)
GACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTA < SRR4302533.4048337/94‑1 (MQ=60)
ACCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTAC > SRR4302533.4093946/1‑94 (MQ=60)
CCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACT < SRR4302533.2001066/94‑1 (MQ=60)
CCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACT < SRR4302533.2328712/94‑1 (MQ=60)
CCAACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACT > SRR4302533.5576693/1‑94 (MQ=60)
CACCCTCATCACCGGTTTTCTCGGCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTG < SRR4302533.3839144/94‑1 (MQ=60)
AACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGG < SRR4302533.5227438/94‑1 (MQ=60)
ACCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGT > SRR4302533.4652850/1‑94 (MQ=60)
CCTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTT > SRR4302533.3430397/1‑94 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA > SRR4302533.5700765/1‑94 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA < SRR4302533.2278391/94‑1 (MQ=60)
CTCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTA > SRR4302533.4513988/1‑94 (MQ=60)
TCATCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAA < SRR4302533.1662795/94‑1 (MQ=60)
TCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGA < SRR4302533.5194283/94‑1 (MQ=60)
TCACCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGA < SRR4302533.5194281/94‑1 (MQ=60)
CCGGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATT < SRR4302533.5554015/94‑1 (MQ=60)
GGTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTG > SRR4302533.2926600/1‑94 (MQ=60)
GTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGG < SRR4302533.389711/94‑1 (MQ=60)
GTTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGG < SRR4302533.4436965/94‑1 (MQ=60)
TTTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGG < SRR4302533.5594028/94‑1 (MQ=60)
TTTCTCGGCGGCGGGAATCCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGG < SRR4302533.3170034/94‑1 (MQ=60)
TTTCTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGG < SRR4302533.1587345/94‑1 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG > SRR4302533.2526527/1‑94 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG > SRR4302533.1013343/1‑94 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG < SRR4302533.5479175/94‑1 (MQ=60)
CTCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAG < SRR4302533.1695323/94‑1 (MQ=60)
TCGGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGT > SRR4302533.4286942/1‑94 (MQ=60)
GGCGGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCG > SRR4302533.4230787/1‑94 (MQ=60)
GCGGCGGGAAACCCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGG < SRR4302533.3549699/94‑1 (MQ=60)
|
CCTTTTTTAGCCAGGATTAACGCTCAGTTAA‑CTTACCAGAGTATTGCGGAGCCGTTGTGACCAGGACCAACCTCATCACCGGTTTTCTCGGCAGCGGGAAAACCACGTCGATTCTTCATCTGTTAGCCCATAAAGATCCCAACGAAAAATGGGCGGTACTGGTTAATGAATTTGGGGAAGTCGG > NC_000913/2265793‑2265976
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
