Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,276,343 T→C intergenic (‑86/+247) yejG ← / ← bcr hypothetical protein/bicyclomycin resistance protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,276,3430TC99.6% 1456.1 / ‑3.8 446intergenic (‑86/+247)yejG/bcrhypothetical protein/bicyclomycin resistance protein
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base C (220/224);  total (221/225)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.53e-01

Only 100 of 453 total aligned reads displayed.

GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC  >  NC_000913/2276253‑2276432
                                                                                          |                                                                                         
 tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa                                                                                        <  1:10024665/93‑1 (MQ=255)
 tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa                                                                                        <  2:1874992/93‑1 (MQ=255)
 tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa                                                                                        >  1:7539513/1‑93 (MQ=255)
 tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa                                                                                        <  2:8860872/93‑1 (MQ=255)
  cACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAg                                                                                       >  2:9597410/1‑93 (MQ=255)
  cACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTAAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAg                                                                                       >  2:752443/1‑93 (MQ=255)
   aCTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGa                                                                                      >  2:5983797/1‑93 (MQ=255)
    cTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAt                                                                                     >  2:5208996/1‑93 (MQ=255)
       aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa                                                                                  <  2:3558905/93‑1 (MQ=255)
       aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa                                                                                  <  2:713498/93‑1 (MQ=255)
       aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa                                                                                  <  1:3734823/93‑1 (MQ=255)
        ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt                                                                                 <  1:2916727/93‑1 (MQ=255)
        ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt                                                                                 <  1:668588/93‑1 (MQ=255)
         tttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATg                                                                                <  2:2686540/93‑1 (MQ=255)
         tttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATg                                                                                <  1:5985545/93‑1 (MQ=255)
          ttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGc                                                                               >  1:6156884/1‑93 (MQ=255)
            ccccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCt                                                                             <  2:8483898/93‑1 (MQ=255)
             cccGGAAGCACATTCACTTCACAGTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTc                                                                            <  2:7233920/93‑1 (MQ=255)
             cccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTc                                                                            >  2:9878846/1‑93 (MQ=255)
              ccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCg                                                                           >  2:433948/1‑93 (MQ=255)
               cGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGc                                                                          >  1:2254468/1‑93 (MQ=255)
               cGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGc                                                                          <  2:3570595/93‑1 (MQ=255)
               cGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGc                                                                          <  2:4473382/93‑1 (MQ=255)
                ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc                                                                         >  1:3232286/1‑93 (MQ=255)
                ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc                                                                         <  1:7408198/93‑1 (MQ=255)
                ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc                                                                         >  1:4023386/1‑93 (MQ=255)
                ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc                                                                         >  1:6409758/1‑93 (MQ=255)
                 gAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCt                                                                        >  2:2382088/1‑93 (MQ=255)
                 gAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCt                                                                        >  1:4332478/1‑93 (MQ=255)
                  aaGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTg                                                                       >  1:2974751/1‑93 (MQ=255)
                    gCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCg                                                                     >  1:5076800/1‑93 (MQ=255)
                     cacaTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGt                                                                    <  1:8130655/93‑1 (MQ=255)
                      acaTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg                                                                   <  1:9125694/93‑1 (MQ=255)
                      acaTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg                                                                   >  1:2779208/1‑93 (MQ=255)
                      acaTTCACTTCACAATGTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg                                                                   >  2:6707565/1‑93 (MQ=255)
                      aaaTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAACCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg                                                                   <  1:4966136/91‑1 (MQ=255)
                        aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc                                                                 >  1:1349090/1‑93 (MQ=255)
                           cacttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctc                                                              <  2:3697927/93‑1 (MQ=255)
                            acttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct                                                             <  2:4996636/93‑1 (MQ=255)
                            acttcacAATTTGTTTACATCAACTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct                                                             <  2:5551938/93‑1 (MQ=255)
                             cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa                                                            >  1:7034724/1‑93 (MQ=255)
                               tcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATg                                                          <  1:4210318/93‑1 (MQ=255)
                               tcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATg                                                          >  1:4735264/1‑93 (MQ=255)
                                cacaATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATgg                                                         >  2:6445088/1‑93 (MQ=255)
                                 acaATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGc                                                        >  2:4162297/1‑93 (MQ=255)
                                   aaTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctc                                                      <  1:9635656/93‑1 (MQ=255)
                                    aTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctct                                                     >  1:7754927/1‑93 (MQ=255)
                                     tttGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTg                                                    >  2:3927412/1‑93 (MQ=255)
                                      ttGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGa                                                   <  1:998237/93‑1 (MQ=255)
                                       tGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAt                                                  >  2:3175960/1‑93 (MQ=255)
                                        gTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAtt                                                 <  2:4694988/93‑1 (MQ=255)
                                         tttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAttt                                                >  1:9783821/1‑93 (MQ=255)
                                          ttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTa                                               >  2:9366992/1‑93 (MQ=255)
                                           tACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTaa                                              <  1:3918839/93‑1 (MQ=255)
                                             cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt                                            >  1:9494734/1‑93 (MQ=255)
                                             cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt                                            >  2:2927673/1‑93 (MQ=255)
                                              ctCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTa                                           <  2:2484248/92‑1 (MQ=255)
                                                cAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAat                                         <  1:1184032/93‑1 (MQ=255)
                                                cAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAat                                         <  1:9003202/93‑1 (MQ=255)
                                                 aaTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAata                                        >  1:2431756/1‑93 (MQ=255)
                                                   ttttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATc                                      <  1:1589868/93‑1 (MQ=255)
                                                   ttttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATc                                      <  2:8186051/93‑1 (MQ=255)
                                                   ttttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATc                                      <  1:9394071/93‑1 (MQ=255)
                                                   ttttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATc                                      <  2:8392377/93‑1 (MQ=255)
                                                    tttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCt                                     >  1:5510952/1‑93 (MQ=255)
                                                     ttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTg                                    <  1:7935455/93‑1 (MQ=255)
                                                     ttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTg                                    <  2:5104020/93‑1 (MQ=255)
                                                          acaTCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGc                               >  1:4583584/1‑93 (MQ=255)
                                                            atcatcAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGt                             >  1:7340516/1‑93 (MQ=255)
                                                             tcatcaACAATCCGTCTTTATACAGATCGCAAAGCTTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTACTATCTGCGGGCGTg                            >  1:5905592/1‑93 (MQ=255)
                                                             tcatcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTg                            >  1:5766196/1‑93 (MQ=255)
                                                                  aacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCAc                       <  1:6931500/93‑1 (MQ=255)
                                                                  aacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCAc                       <  1:1778103/93‑1 (MQ=255)
                                                                   acaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACg                      >  2:8645168/1‑93 (MQ=255)
                                                                   acaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACg                      >  1:8021278/1‑93 (MQ=255)
                                                                    caaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGt                     >  2:3404914/1‑93 (MQ=255)
                                                                     aaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACgct                    >  1:2749901/1‑91 (MQ=255)
                                                                     aaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGtt                    >  2:1577134/1‑93 (MQ=255)
                                                                       tCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTg                  <  2:6908531/93‑1 (MQ=255)
                                                                       tCCATCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTg                  <  2:5296467/93‑1 (MQ=255)
                                                                           tCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCggg              <  1:8591644/93‑1 (MQ=255)
                                                                              ttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCt           <  2:13382/93‑1 (MQ=255)
                                                                               tataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta          >  1:5646565/1‑93 (MQ=255)
                                                                               tataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta          >  1:3063316/1‑93 (MQ=255)
                                                                               tataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta          <  1:2600737/93‑1 (MQ=255)
                                                                               tataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta          <  2:7946059/93‑1 (MQ=255)
                                                                               tataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta          <  1:6495305/93‑1 (MQ=255)
                                                                                ataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtat         <  2:7815772/93‑1 (MQ=255)
                                                                                 taCAGATCGCAAATATTGATGCCTTGCCTGCGTGTCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        <  2:5349085/93‑1 (MQ=255)
                                                                                 taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        <  2:5675560/93‑1 (MQ=255)
                                                                                 taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        <  1:2128616/93‑1 (MQ=255)
                                                                                 taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata        >  1:3470323/1‑93 (MQ=255)
                                                                                  aCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTatat       >  2:1984316/1‑93 (MQ=255)
                                                                                    aGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCGCGTTTGCGGGGCTATATGt     <  1:8268886/93‑1 (MQ=255)
                                                                                    aGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGt     <  2:8087286/93‑1 (MQ=255)
                                                                                    aGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGt     >  1:1699830/1‑93 (MQ=255)
                                                                                      aTCGCAAAGATTGATGCCTCGCCTGCGTGGCCTATATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAc   <  2:8953755/93‑1 (MQ=255)
                                                                                       tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc  <  1:6233338/93‑1 (MQ=255)
                                                                                       tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc  >  1:8695793/1‑93 (MQ=255)
                                                                                       tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc  <  2:6279672/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC  >  NC_000913/2276253‑2276432

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 253 total aligned reads displayed.
GAAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGTT  >  NC_000913/2276250‑2276436
                                                                                             |                                                                                             
 AAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCA                                                                                              >  SRR4302540.581014/1‑94 (MQ=60)
 AAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCA                                                                                              >  SRR4302540.1180026/1‑94 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            >  SRR4302540.9139565/1‑94 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            >  SRR4302540.7623966/1‑94 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            <  SRR4302540.265001/94‑1 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            <  SRR4302540.726297/94‑1 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            >  SRR4302540.4781097/1‑94 (MQ=60)
   GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA                                                                                            <  SRR4302540.6316555/94‑1 (MQ=60)
    TCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG                                                                                           >  SRR4302540.7560001/1‑94 (MQ=60)
    TCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG                                                                                           <  SRR4302540.10141314/94‑1 (MQ=60)
     CACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGA                                                                                          >  SRR4302540.397685/1‑94 (MQ=60)
      ACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAT                                                                                         >  SRR4302540.1982562/1‑94 (MQ=60)
       CTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCATTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATT                                                                                        <  SRR4302540.7569032/94‑1 (MQ=60)
       CTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATT                                                                                        >  SRR4302540.6542652/1‑94 (MQ=60)
       CTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATT                                                                                        >  SRR4302540.3074573/1‑94 (MQ=60)
          ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT                                                                                     <  SRR4302540.3775571/94‑1 (MQ=60)
          ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT                                                                                     <  SRR4302540.3747156/94‑1 (MQ=60)
          ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT                                                                                     <  SRR4302540.6498180/94‑1 (MQ=60)
          ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT                                                                                     <  SRR4302540.5623364/94‑1 (MQ=60)
           TTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATG                                                                                    <  SRR4302540.2948645/94‑1 (MQ=60)
           TTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATG                                                                                    <  SRR4302540.675757/94‑1 (MQ=60)
            TTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGC                                                                                   <  SRR4302540.6051835/94‑1 (MQ=60)
            TTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGC                                                                                   >  SRR4302540.6225480/1‑94 (MQ=60)
             TTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCC                                                                                  <  SRR4302540.9400010/94‑1 (MQ=60)
              TCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCT                                                                                 >  SRR4302540.856932/1‑94 (MQ=60)
               CCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTC                                                                                <  SRR4302540.2706843/94‑1 (MQ=60)
               CCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTC                                                                                >  SRR4302540.8213639/1‑94 (MQ=60)
               CCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGACTC                                                                                >  SRR4302540.1690369/1‑94 (MQ=60)
                CCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCG                                                                               >  SRR4302540.8634231/1‑94 (MQ=60)
                CCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCG                                                                               >  SRR4302540.3196288/1‑94 (MQ=60)
                CCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCG                                                                               >  SRR4302540.6250312/1‑94 (MQ=60)
                 CCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGC                                                                              >  SRR4302540.2278662/1‑94 (MQ=60)
                 CCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGC                                                                              >  SRR4302540.114232/1‑94 (MQ=60)
                 CCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGC                                                                              >  SRR4302540.1224913/1‑94 (MQ=60)
                  CGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCC                                                                             >  SRR4302540.5883102/1‑94 (MQ=60)
                  CGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCC                                                                             >  SRR4302540.3267434/1‑94 (MQ=60)
                  CGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCC                                                                             >  SRR4302540.6481097/1‑94 (MQ=60)
                  CGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCC                                                                             >  SRR4302540.4066751/1‑94 (MQ=60)
                   GGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCT                                                                            <  SRR4302540.1013166/94‑1 (MQ=60)
                   GGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCT                                                                            >  SRR4302540.4379640/1‑94 (MQ=60)
                   GGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCT                                                                            >  SRR4302540.3073242/1‑94 (MQ=60)
                    GAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTG                                                                           >  SRR4302540.2346985/1‑94 (MQ=60)
                    GAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTG                                                                           >  SRR4302540.3007633/1‑94 (MQ=60)
                    GAAGCACATGCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTG                                                                           <  SRR4302540.4342164/94‑1 (MQ=60)
                     AAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGC                                                                          >  SRR4302540.8364737/1‑94 (MQ=60)
                      AGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCG                                                                         >  SRR4302540.5131691/1‑94 (MQ=60)
                      AGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCG                                                                         >  SRR4302540.6705761/1‑94 (MQ=60)
                       GCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGT                                                                        >  SRR4302540.4727398/1‑94 (MQ=60)
                       GCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGT                                                                        <  SRR4302540.2273021/94‑1 (MQ=60)
                       ACACATTCACTGCACAATTTGTTTACATCAATTCTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGT                                                                        <  SRR4302540.6786760/94‑1 (MQ=60)
                        CACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTG                                                                       <  SRR4302540.8225029/94‑1 (MQ=60)
                        CACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTG                                                                       >  SRR4302540.2809237/1‑94 (MQ=60)
                         ACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGG                                                                      >  SRR4302540.88815/1‑94 (MQ=60)
                         ACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGG                                                                      >  SRR4302540.8220979/1‑94 (MQ=60)
                         ACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGG                                                                      <  SRR4302540.9235384/94‑1 (MQ=60)
                         AAATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAACCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGG                                                                      <  SRR4302540.5019853/94‑1 (MQ=60)
                          CATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGC                                                                     >  SRR4302540.1363268/1‑94 (MQ=60)
                          CATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGC                                                                     <  SRR4302540.6975515/94‑1 (MQ=60)
                           ATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCC                                                                    >  SRR4302540.8993666/1‑94 (MQ=60)
                           ATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCC                                                                    >  SRR4302540.4031560/1‑94 (MQ=60)
                           ATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCC                                                                    >  SRR4302540.8993665/1‑94 (MQ=60)
                            TTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCT                                                                   >  SRR4302540.9275556/1‑94 (MQ=60)
                             TCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTC                                                                  >  SRR4302540.6164989/1‑94 (MQ=60)
                               ACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTA                                                                >  SRR4302540.7112909/1‑94 (MQ=60)
                                CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT                                                               <  SRR4302540.8156208/94‑1 (MQ=60)
                                CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT                                                               <  SRR4302540.4220747/94‑1 (MQ=60)
                                CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT                                                               <  SRR4302540.2955650/94‑1 (MQ=60)
                                CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT                                                               <  SRR4302540.3328639/94‑1 (MQ=60)
                                CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT                                                               >  SRR4302540.7939851/1‑94 (MQ=60)
                                 TTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATG                                                              >  SRR4302540.4785819/1‑94 (MQ=60)
                                 TTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATG                                                              >  SRR4302540.4757715/1‑94 (MQ=60)
                                 TTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATG                                                              >  SRR4302540.3051443/1‑94 (MQ=60)
                                 TTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATG                                                              >  SRR4302540.7443730/1‑94 (MQ=60)
                                 TTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGACGCCTCGCCTGCGTGGCCTCTATG                                                              <  SRR4302540.1759412/94‑1 (MQ=60)
                                  TCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGG                                                             <  SRR4302540.4256161/94‑1 (MQ=60)
                                  TCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGG                                                             >  SRR4302540.4379667/1‑94 (MQ=60)
                                   CACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGC                                                            >  SRR4302540.9726928/1‑94 (MQ=60)
                                   CACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGC                                                            <  SRR4302540.8021976/94‑1 (MQ=60)
                                    ACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCT                                                           <  SRR4302540.8070228/94‑1 (MQ=60)
                                     CAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTC                                                          >  SRR4302540.3920276/1‑94 (MQ=60)
                                     CAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTC                                                          <  SRR4302540.2404787/94‑1 (MQ=60)
                                      AATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCT                                                         <  SRR4302540.7524962/94‑1 (MQ=60)
                                      AATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCT                                                         <  SRR4302540.9749176/94‑1 (MQ=60)
                                      AATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCT                                                         <  SRR4302540.878773/94‑1 (MQ=60)
                                      AATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCT                                                         <  SRR4302540.33369/94‑1 (MQ=60)
                                        TTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGT                                                       >  SRR4302540.7460326/1‑94 (MQ=60)
                                        TTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGA                                                       >  SRR4302540.124675/1‑94 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      <  SRR4302540.4404596/94‑1 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      <  SRR4302540.1008386/94‑1 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      >  SRR4302540.6335189/1‑94 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      >  SRR4302540.9522148/1‑94 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      >  SRR4302540.3938011/1‑94 (MQ=60)
                                         TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT                                                      <  SRR4302540.1535720/94‑1 (MQ=60)
                                          TGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATT                                                     >  SRR4302540.2805665/1‑94 (MQ=60)
                                           GTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTT                                                    >  SRR4302540.9898471/1‑94 (MQ=60)
                                            TTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTA                                                   <  SRR4302540.2862924/94‑1 (MQ=60)
                                              TACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAG                                                 >  SRR4302540.7976697/1‑94 (MQ=60)
                                              TACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAG                                                 <  SRR4302540.3961265/94‑1 (MQ=60)
                                               ACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGT                                                <  SRR4302540.7879199/94‑1 (MQ=60)
                                               ACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGT                                                >  SRR4302540.9607265/1‑94 (MQ=60)
                                                CATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTA                                               <  SRR4302540.4881663/94‑1 (MQ=60)
                                                  TCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAAT                                             <  SRR4302540.2313428/94‑1 (MQ=60)
                                                  TCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAAT                                             <  SRR4302540.2077266/94‑1 (MQ=60)
                                                  TCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAAT                                             >  SRR4302540.959463/1‑94 (MQ=60)
                                                   CAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATA                                            >  SRR4302540.2457954/1‑94 (MQ=60)
                                                   CAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATA                                            >  SRR4302540.3560080/1‑94 (MQ=60)
                                                   CAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATA                                            <  SRR4302540.9111216/94‑1 (MQ=60)
                                                   CAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATA                                            <  SRR4302540.1196253/94‑1 (MQ=60)
                                                     ATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATC                                          >  SRR4302540.5744591/1‑94 (MQ=60)
                                                     ATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATC                                          <  SRR4302540.5733816/94‑1 (MQ=60)
                                                     ATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATC                                          <  SRR4302540.2254047/94‑1 (MQ=60)
                                                      TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT                                         <  SRR4302540.9563777/94‑1 (MQ=60)
                                                      TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT                                         <  SRR4302540.9505855/94‑1 (MQ=60)
                                                      TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT                                         <  SRR4302540.767599/94‑1 (MQ=60)
                                                      TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT                                         >  SRR4302540.6048589/1‑94 (MQ=60)
                                                      TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT                                         <  SRR4302540.1607230/94‑1 (MQ=60)
                                                        TTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGC                                       >  SRR4302540.7116508/1‑94 (MQ=60)
                                                        TTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGC                                       >  SRR4302540.7096544/1‑94 (MQ=60)
                                                        TTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGC                                       <  SRR4302540.8027946/94‑1 (MQ=60)
                                                         TAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGCTTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCG                                      >  SRR4302540.6837371/1‑94 (MQ=60)
                                                          AACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGG                                     <  SRR4302540.6252164/94‑1 (MQ=60)
                                                            CACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGG                                   >  SRR4302540.5479854/1‑94 (MQ=60)
                                                            CACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGC                                   >  SRR4302540.4632978/1‑94 (MQ=60)
                                                              CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCTTGGCCTCTGTGCCTCTGATTTAGTGAATATCTGCGGGCGG                                 >  SRR4302540.1657164/1‑94 (MQ=60)
                                                              CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGT                                 >  SRR4302540.1755140/1‑94 (MQ=60)
                                                              CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGT                                 <  SRR4302540.2850974/94‑1 (MQ=60)
                                                              CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGT                                 >  SRR4302540.7422427/1‑94 (MQ=60)
                                                              CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGG                                 >  SRR4302540.1657165/1‑94 (MQ=60)
                                                               ATCATCAACAATCCGTCTTTATACAGATCGCAAAGCTTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTACTATCTGCGGGCGTG                                >  SRR4302540.5970823/1‑94 (MQ=60)
                                                               ATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTG                                >  SRR4302540.5970824/1‑94 (MQ=60)
                                                               ATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTG                                >  SRR4302540.5829863/1‑94 (MQ=60)
                                                                 CATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTACTATCTGCGGGCGTGGT                              <  SRR4302540.9909195/94‑1 (MQ=60)
                                                                 CATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGT                              >  SRR4302540.2536590/1‑94 (MQ=60)
                                                                  ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC                             <  SRR4302540.3042019/94‑1 (MQ=60)
                                                                  ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC                             <  SRR4302540.2905937/94‑1 (MQ=60)
                                                                  ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC                             >  SRR4302540.513751/1‑94 (MQ=60)
                                                                   TCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCA                            <  SRR4302540.1197292/94‑1 (MQ=60)
                                                                   TCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCA                            >  SRR4302540.9572398/1‑94 (MQ=60)
                                                                    CAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCAC                           <  SRR4302540.7009149/94‑1 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          >  SRR4302540.3474358/1‑94 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          >  SRR4302540.5284428/1‑94 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          <  SRR4302540.9428732/94‑1 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          <  SRR4302540.1797409/94‑1 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          <  SRR4302540.7008634/94‑1 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          <  SRR4302540.1797408/94‑1 (MQ=60)
                                                                     AACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACG                          >  SRR4302540.8114571/1‑94 (MQ=60)
                                                                      ACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGT                         <  SRR4302540.7806807/94‑1 (MQ=60)
                                                                       CAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTT                        >  SRR4302540.2779615/1‑94 (MQ=60)
                                                                       CAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGCT                        >  SRR4302540.2779616/1‑94 (MQ=60)
                                                                        AATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTT                       >  SRR4302540.6624277/1‑94 (MQ=60)
                                                                        AATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTT                       <  SRR4302540.1560199/94‑1 (MQ=60)
                                                                         ATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTG                      >  SRR4302540.2968821/1‑94 (MQ=60)
                                                                         ATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTG                      <  SRR4302540.3248339/94‑1 (MQ=60)
                                                                         ATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTG                      >  SRR4302540.5947819/1‑94 (MQ=60)
                                                                         ATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTG                      >  SRR4302540.8089444/1‑94 (MQ=60)
                                                                          TCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGC                     <  SRR4302540.2787882/94‑1 (MQ=60)
                                                                          TCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGC                     <  SRR4302540.10032879/94‑1 (MQ=60)
                                                                          TCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGC                     <  SRR4302540.7791295/94‑1 (MQ=60)
                                                                           CCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCG                    <  SRR4302540.4200503/94‑1 (MQ=60)
                                                                            CGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGG                   <  SRR4302540.5579932/94‑1 (MQ=60)
                                                                            CGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTAAAGTAATATCTGCGGGCGTGGTCACGTTTGCGG                   >  SRR4302540.9803148/1‑94 (MQ=60)
                                                                            CGTCTGTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGG                   <  SRR4302540.5579933/94‑1 (MQ=60)
                                                                             GTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGG                  >  SRR4302540.4273016/1‑94 (MQ=60)
                                                                             GTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGG                  <  SRR4302540.5032508/94‑1 (MQ=60)
                                                                             GTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGG                  <  SRR4302540.7455452/94‑1 (MQ=60)
                                                                              TCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGG                 <  SRR4302540.8691523/94‑1 (MQ=60)
                                                                               CTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTGAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGC                >  SRR4302540.5052782/1‑94 (MQ=60)
                                                                                 TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTT              >  SRR4302540.5708711/1‑94 (MQ=60)
                                                                                 TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTA              >  SRR4302540.3739308/1‑94 (MQ=60)
                                                                                 TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTA              >  SRR4302540.5708712/1‑94 (MQ=60)
                                                                                 TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTA              >  SRR4302540.3096925/1‑94 (MQ=60)
                                                                                 TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGCTTGCGGGGCTA              >  SRR4302540.1993890/1‑94 (MQ=60)
                                                                                  TATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT             >  SRR4302540.9777450/1‑94 (MQ=60)
                                                                                  TATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT             >  SRR4302540.7344471/1‑94 (MQ=60)
                                                                                  TATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT             <  SRR4302540.2628786/94‑1 (MQ=60)
                                                                                  TATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT             <  SRR4302540.6567538/94‑1 (MQ=60)
                                                                                  TATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT             <  SRR4302540.8761845/94‑1 (MQ=60)
                                                                                   ATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATA            >  SRR4302540.3508104/1‑94 (MQ=60)
                                                                                   ATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATA            <  SRR4302540.5918899/94‑1 (MQ=60)
                                                                                    TACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT           <  SRR4302540.9214811/94‑1 (MQ=60)
                                                                                    TACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT           <  SRR4302540.2622416/94‑1 (MQ=60)
                                                                                    TACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT           <  SRR4302540.2151455/94‑1 (MQ=60)
                                                                                    TACAGATCGCAAAGATTGATGCCTCGCCTGCGTAGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT           <  SRR4302540.9840548/94‑1 (MQ=60)
                                                                                     ACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATG          >  SRR4302540.4019774/1‑94 (MQ=60)
                                                                                      CAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGT         <  SRR4302540.648998/94‑1 (MQ=60)
                                                                                      CAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGA         >  SRR4302540.6055368/1‑94 (MQ=60)
                                                                                       AGATCGCAAAGATTTAGGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTA        <  SRR4302540.8364962/94‑1 (MQ=60)
                                                                                       AGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCGCGTTTGCGGGGCTATATGTA        <  SRR4302540.8364963/94‑1 (MQ=60)
                                                                                        GATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAC       >  SRR4302540.435418/1‑94 (MQ=60)
                                                                                        GATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAC       <  SRR4302540.4919301/94‑1 (MQ=60)
                                                                                         ATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC      >  SRR4302540.8796742/1‑94 (MQ=60)
                                                                                         ATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC      <  SRR4302540.5060500/94‑1 (MQ=60)
                                                                                         ATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGCAATATCTGCGGGCGTTGTCACGTTTGCGGGGCTATATGTACC      >  SRR4302540.8669133/1‑94 (MQ=60)
                                                                                          TCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCC     <  SRR4302540.6220034/94‑1 (MQ=60)
                                                                                          TCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCC     <  SRR4302540.6302662/94‑1 (MQ=60)
                                                                                          TCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCC     <  SRR4302540.6302663/94‑1 (MQ=60)
                                                                                          TCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCC     <  SRR4302540.3438312/94‑1 (MQ=60)
                                                                                           CGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCG    <  SRR4302540.1632420/94‑1 (MQ=60)
                                                                                           CGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCG    <  SRR4302540.127912/94‑1 (MQ=60)
                                                                                            GCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGT   >  SRR4302540.5816646/1‑94 (MQ=60)
                                                                                             |                                                                                             
GAAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGTT  >  NC_000913/2276250‑2276436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑