Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,534,957 |
A→G |
S101P (TCG→CCG) |
pdxK ← |
pyridoxal/pyridoxine/pyridoxamine kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,534,957 | 0 | A | G | 100.0%
| 728.7
/ NA
| 227 | S101P (TCG→CCG) | pdxK | pyridoxal/pyridoxine/pyridoxamine kinase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (103/124); total (103/124) |
Only 100 of 235 total aligned reads displayed.
TATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGATGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATT > NC_000913/2534867‑2535046
|
tatCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTg > 1:2257386/1‑93 (MQ=255)
ccAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGtt > 1:1822234/1‑93 (MQ=255)
cAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTc < 1:6146452/93‑1 (MQ=255)
cAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTc < 1:733268/93‑1 (MQ=255)
cAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTc > 2:4740067/1‑93 (MQ=255)
aaTCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTcc > 2:1947596/1‑93 (MQ=255)
aaTCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTcc < 1:2314163/93‑1 (MQ=255)
aTCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTccc < 1:5634320/93‑1 (MQ=255)
cACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCat < 2:5028392/93‑1 (MQ=255)
ccGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCatat < 2:1249878/93‑1 (MQ=255)
ccGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCatat > 2:5152459/1‑93 (MQ=255)
cGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCAtata > 1:3651551/1‑93 (MQ=255)
ggATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAg > 2:2017483/1‑93 (MQ=255)
gACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGt > 1:5513111/1‑93 (MQ=255)
aCCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTg < 1:6210927/93‑1 (MQ=255)
aCCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTg > 2:2813547/1‑93 (MQ=255)
ccATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTgg < 2:368522/93‑1 (MQ=255)
ccATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTgg > 2:2674583/1‑93 (MQ=255)
ccATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTgg > 1:2201511/1‑93 (MQ=255)
cATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGt < 2:4422917/93‑1 (MQ=255)
cATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGt < 2:2601635/93‑1 (MQ=255)
cATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGt < 2:3062176/93‑1 (MQ=255)
aTGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGtt < 2:5915999/93‑1 (MQ=255)
aTGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGtt > 2:2087869/1‑93 (MQ=255)
aTCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACa < 2:3336813/93‑1 (MQ=255)
tCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAg > 1:1523479/1‑93 (MQ=255)
tCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAg > 1:4296427/1‑93 (MQ=255)
tCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAg > 1:5387991/1‑93 (MQ=255)
tCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAg > 1:4691058/1‑93 (MQ=255)
tCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAg > 1:3005869/1‑93 (MQ=255)
aaTAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCa < 2:5088565/93‑1 (MQ=255)
aTAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCAc < 2:1075201/93‑1 (MQ=255)
aTAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCAc < 1:2697905/93‑1 (MQ=255)
aTAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCAc > 2:3480437/1‑93 (MQ=255)
tAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACg > 2:789325/1‑93 (MQ=255)
ggTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGaa < 2:2146147/93‑1 (MQ=255)
ggTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTAAAGCACGaa < 2:6141800/93‑1 (MQ=255)
gTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAg < 2:391284/93‑1 (MQ=255)
gTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAg < 2:4148961/93‑1 (MQ=255)
tCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGt > 2:4925285/1‑93 (MQ=255)
ggATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTgg < 1:3953746/93‑1 (MQ=255)
ggATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTgg > 1:6281315/1‑93 (MQ=255)
gATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgc > 1:105939/1‑93 (MQ=255)
tGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgc < 2:5537703/93‑1 (MQ=255)
tGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgc < 1:1496562/93‑1 (MQ=255)
tGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgc > 2:4350749/1‑93 (MQ=255)
tCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgcagc < 2:2496629/93‑1 (MQ=255)
tCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgcagc > 1:1212975/1‑93 (MQ=255)
tttGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgcagcgc > 1:2360533/1‑93 (MQ=255)
tttGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgcagcgc > 1:2598407/1‑93 (MQ=255)
ttGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGgcgcagcgca < 1:2878221/93‑1 (MQ=255)
tGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCAt > 1:336348/1‑93 (MQ=255)
gCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATc < 1:2025647/93‑1 (MQ=255)
cGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCa < 2:1336729/93‑1 (MQ=255)
gTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCAc < 1:4122644/93‑1 (MQ=255)
gTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCAc < 1:3673776/93‑1 (MQ=255)
tAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACg > 1:2857148/1‑93 (MQ=255)
aGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGc > 1:5948837/1‑93 (MQ=255)
gcgcAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCt < 2:2998209/93‑1 (MQ=255)
gcAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTcc > 2:3173648/1‑93 (MQ=255)
gcAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTcc > 1:5050946/1‑93 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt > 1:4855422/1‑93 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt > 2:3896551/1‑93 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt < 1:4503150/93‑1 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt < 2:3533459/93‑1 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt < 1:525970/93‑1 (MQ=255)
cAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCt < 2:1210702/93‑1 (MQ=255)
aGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTg > 2:5969429/1‑93 (MQ=255)
gTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGa < 1:4748058/93‑1 (MQ=255)
tCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGaa < 1:6138107/93‑1 (MQ=255)
tCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTCGTTACAGCACGAAGTTGGTGCAGCGCATCAAGCTCCTGaa > 2:1734628/1‑93 (MQ=255)
cAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAg < 1:4158045/93‑1 (MQ=255)
aGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAgc < 2:2164335/93‑1 (MQ=255)
aGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAgc < 1:921774/93‑1 (MQ=255)
cACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGcgca < 1:3217551/93‑1 (MQ=255)
aCTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGcgcac < 2:5371295/93‑1 (MQ=255)
aCTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGcgcac > 1:4987882/1‑93 (MQ=255)
cAAGGATTTTGATTTGCTGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAAt > 1:2100624/1‑93 (MQ=255)
cAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAAt > 2:5785554/1‑93 (MQ=255)
cAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGAGCATCACGCTCCTGAAGCGCACGCAAAt < 2:6090330/93‑1 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATa > 2:4199549/1‑93 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATa > 2:4501345/1‑93 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATa < 1:877917/93‑1 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATa > 2:6226221/1‑93 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATa < 1:426034/93‑1 (MQ=255)
aaGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATAACGCTCCTGAAGCGCACGCAAATa < 1:6069012/93‑1 (MQ=255)
aGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAg < 2:1582347/93‑1 (MQ=255)
aGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAg < 2:1838018/93‑1 (MQ=255)
aGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAg > 1:3577691/1‑93 (MQ=255)
gATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGcc < 1:5794747/93‑1 (MQ=255)
ttttGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGc > 1:1006539/1‑93 (MQ=255)
ttttGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGc > 2:4677968/1‑93 (MQ=255)
tttGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCt > 1:5564229/1‑93 (MQ=255)
ttGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCACTa > 1:5743909/1‑93 (MQ=255)
gATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTaaa > 1:5131882/1‑93 (MQ=255)
tGCGGTGCCGTTCCCATATAGCCAGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAt < 2:5043180/93‑1 (MQ=255)
gCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAtt < 1:3070323/93‑1 (MQ=255)
gCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAtt > 2:4093481/1‑93 (MQ=255)
gCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAtt < 2:3426854/93‑1 (MQ=255)
gCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAtt < 2:784423/93‑1 (MQ=255)
|
TATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGATGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATT > NC_000913/2534867‑2535046
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGATGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATTC > NC_000913/2534864‑2535047
|
CAATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGG > SRR4302533.4385110/1‑94 (MQ=60)
AATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGT < SRR4302533.2559142/94‑1 (MQ=60)
ATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTG > SRR4302533.2271353/1‑94 (MQ=60)
ATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTG < SRR4302533.5080208/94‑1 (MQ=60)
ATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTG < SRR4302533.2891330/94‑1 (MQ=60)
TATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGC > SRR4302533.600332/1‑94 (MQ=60)
CGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGT < SRR4302533.6208035/94‑1 (MQ=60)
GCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTT > SRR4302533.1526503/1‑94 (MQ=60)
GCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTT > SRR4302533.1833365/1‑94 (MQ=60)
CCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTC < SRR4302533.6017905/94‑1 (MQ=60)
CAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCC > SRR4302533.5522053/1‑94 (MQ=60)
CAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCC < SRR4302533.6183457/94‑1 (MQ=60)
CAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCC < SRR4302533.737581/94‑1 (MQ=60)
CAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCC > SRR4302533.3195147/1‑94 (MQ=60)
CAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCC > SRR4302533.150282/1‑94 (MQ=60)
AATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCC > SRR4302533.4715508/1‑94 (MQ=60)
AATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCC < SRR4302533.2328498/94‑1 (MQ=60)
ATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCA < SRR4302533.5668390/94‑1 (MQ=60)
TCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCAT < SRR4302533.801921/94‑1 (MQ=60)
TCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCAT > SRR4302533.2310180/1‑94 (MQ=60)
CACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATA > SRR4302533.5923288/1‑94 (MQ=60)
CCCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT < SRR4302533.287534/94‑1 (MQ=60)
ACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT > SRR4302533.4925133/1‑94 (MQ=60)
ACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT < SRR4302533.2109120/94‑1 (MQ=60)
ACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT < SRR4302533.5278373/94‑1 (MQ=60)
ACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT > SRR4302533.5743467/1‑94 (MQ=60)
ACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATAT < SRR4302533.3552771/94‑1 (MQ=60)
CCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATA > SRR4302533.3674001/1‑94 (MQ=60)
CCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATA < SRR4302533.2476655/94‑1 (MQ=60)
CCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATA < SRR4302533.3196178/94‑1 (MQ=60)
CGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAG < SRR4302533.3593425/94‑1 (MQ=60)
CGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAG > SRR4302533.1965844/1‑94 (MQ=60)
GGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGC > SRR4302533.4078072/1‑94 (MQ=60)
CGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGT > SRR4302533.5546391/1‑94 (MQ=60)
GACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTG > SRR4302533.4154285/1‑94 (MQ=60)
ACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGG > SRR4302533.2215077/1‑94 (MQ=60)
ACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGG < SRR4302533.6248175/94‑1 (MQ=60)
CCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGT < SRR4302533.3319402/94‑1 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG < SRR4302533.1958829/94‑1 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG > SRR4302533.4322266/1‑94 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG < SRR4302533.1271204/94‑1 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG > SRR4302533.4719492/1‑94 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG > SRR4302533.1532649/1‑94 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG > SRR4302533.3024256/1‑94 (MQ=60)
ATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAG > SRR4302533.5420367/1‑94 (MQ=60)
TCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGC > SRR4302533.4738740/1‑94 (MQ=60)
CAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCA < SRR4302533.4836898/94‑1 (MQ=60)
CAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCA < SRR4302533.4270197/94‑1 (MQ=60)
CAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCA > SRR4302533.2839831/1‑94 (MQ=60)
ATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACG < SRR4302533.5808383/94‑1 (MQ=60)
ATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACG < SRR4302533.2714438/94‑1 (MQ=60)
ATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACG < SRR4302533.1033813/94‑1 (MQ=60)
AGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAA < SRR4302533.919652/94‑1 (MQ=60)
TCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTT < SRR4302533.3084135/94‑1 (MQ=60)
AGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGG < SRR4302533.2874830/94‑1 (MQ=60)
AGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGG < SRR4302533.6179355/94‑1 (MQ=60)
AGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGG > SRR4302533.6318805/1‑94 (MQ=60)
GGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGC < SRR4302533.3977852/94‑1 (MQ=60)
GGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGC > SRR4302533.106598/1‑94 (MQ=60)
ATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGC < SRR4302533.5755847/94‑1 (MQ=60)
ATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGC > SRR4302533.6233641/1‑94 (MQ=60)
ATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGC > SRR4302533.2218550/1‑94 (MQ=60)
TGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCA < SRR4302533.1505576/94‑1 (MQ=60)
GTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGC > SRR4302533.1220268/1‑94 (MQ=60)
TCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCG > SRR4302533.952513/1‑94 (MQ=60)
CTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGC > SRR4302533.2614375/1‑94 (MQ=60)
CTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGC > SRR4302533.2375121/1‑94 (MQ=60)
TTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCAT > SRR4302533.338404/1‑94 (MQ=60)
TTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCAT < SRR4302533.2895930/94‑1 (MQ=60)
GCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCA < SRR4302533.2038153/94‑1 (MQ=60)
CGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCAC > SRR4302533.6307835/1‑94 (MQ=60)
GTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACG > SRR4302533.2874728/1‑94 (MQ=60)
GTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACG < SRR4302533.4147674/94‑1 (MQ=60)
GTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACG < SRR4302533.3929806/94‑1 (MQ=60)
GTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACG < SRR4302533.3696352/94‑1 (MQ=60)
TAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGC > SRR4302533.5984815/1‑94 (MQ=60)
CGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCC < SRR4302533.5660668/94‑1 (MQ=60)
CGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCC > SRR4302533.5081490/1‑94 (MQ=60)
CGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCC > SRR4302533.5081489/1‑94 (MQ=60)
GCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCT > SRR4302533.4884846/1‑94 (MQ=60)
GCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCT < SRR4302533.5586912/94‑1 (MQ=60)
GCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCT < SRR4302533.531236/94‑1 (MQ=60)
GCAGTCAGCCACTCGGCAAGGATTTTGATTGGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCT < SRR4302533.2904399/94‑1 (MQ=60)
CAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTG > SRR4302533.383002/1‑94 (MQ=60)
CAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTG < SRR4302533.2678703/94‑1 (MQ=60)
CAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTG < SRR4302533.4530431/94‑1 (MQ=60)
CAGTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTG < SRR4302533.529086/94‑1 (MQ=60)
AGTCATCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGA < SRR4302533.4320958/94‑1 (MQ=60)
GTCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAA < SRR4302533.4776842/94‑1 (MQ=60)
TCAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAG < SRR4302533.6175082/94‑1 (MQ=60)
CAGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGC < SRR4302533.4183240/94‑1 (MQ=60)
AGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCG < SRR4302533.5582289/94‑1 (MQ=60)
AGCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCG < SRR4302533.927185/94‑1 (MQ=60)
GCCACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGC < SRR4302533.4426319/94‑1 (MQ=60)
CACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCAC > SRR4302533.713547/1‑94 (MQ=60)
CACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCAC > SRR4302533.5018126/1‑94 (MQ=60)
CACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCAC > SRR4302533.4922877/1‑94 (MQ=60)
CACTCGGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCAC < SRR4302533.3237392/94‑1 (MQ=60)
GGCAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAA > SRR4302533.5284856/1‑94 (MQ=60)
GCAAGGATTTTGATTTGCTGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAAT > SRR4302533.2113580/1‑94 (MQ=60)
CAAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATA < SRR4302533.1115485/94‑1 (MQ=60)
AAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAG < SRR4302533.883070/94‑1 (MQ=60)
AAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAG < SRR4302533.428576/94‑1 (MQ=60)
AAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAG > SRR4302533.3599737/1‑94 (MQ=60)
AAGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATAACGCTCCTGAAGCGCACGCAAATAG < SRR4302533.6105734/94‑1 (MQ=60)
AGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGC > SRR4302533.4568565/1‑94 (MQ=60)
AGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGC < SRR4302533.3681269/94‑1 (MQ=60)
AGGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGC > SRR4302533.2360012/1‑94 (MQ=60)
GGATTTTGATTTGCGGTGCCGTTCCCATATAGCTCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCC < SRR4302533.4216729/94‑1 (MQ=60)
GGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCC < SRR4302533.1624884/94‑1 (MQ=60)
GGATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCC > SRR4302533.2136306/1‑94 (MQ=60)
GATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCG < SRR4302533.5829756/94‑1 (MQ=60)
GATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCG < SRR4302533.2253375/94‑1 (MQ=60)
GATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCG < SRR4302533.3602421/94‑1 (MQ=60)
ATTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGC > SRR4302533.1012430/1‑94 (MQ=60)
TTTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCT > SRR4302533.5597861/1‑94 (MQ=60)
TTTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCACTA > SRR4302533.5778570/1‑94 (MQ=60)
TTGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAA < SRR4302533.612648/94‑1 (MQ=60)
TGATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAA > SRR4302533.5162883/1‑94 (MQ=60)
ATTTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACC < SRR4302533.5099173/94‑1 (MQ=60)
TTGCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCAT > SRR4302533.2404347/1‑94 (MQ=60)
TGCGGTGCCGTTCTCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATT < SRR4302533.745056/94‑1 (MQ=60)
GCGGTGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATTC < SRR4302533.3089175/94‑1 (MQ=60)
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CAATATCGCCAATCACCGGATCGACCATGATCAATAGGTCAGGATGGTCTTTGCGTAGCGCAGTCAGCCACTCGGCAAGGATTTTGATTTGCGATGCCGTTCCCATATAGCCCGTGGTTACAGCACGAAGTTGGCGCAGCGCATCACGCTCCTGAAGCGCACGCAAATAGCCGCTAAACCATTC > NC_000913/2534864‑2535047
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
