Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,693,605 |
(G)7→8 |
intergenic (‑42/‑354) |
purL ← / → yfhD |
phosphoribosylformyl‑glycineamide synthetase/putative periplasmic binding transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,693,598 | 1 | . | G | 94.9%
| 422.2
/ 15.0
| 138 | intergenic (‑35/‑361) | purL/yfhD | phosphoribosylformyl‑glycineamide synthetase/putative periplasmic binding transport protein |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (63/68); total (67/71) |
| Fisher's exact test for biased strand distribution p-value = 7.13e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 |
Only 100 of 166 total aligned reads displayed.
GCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGA‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAA > NC_000913/2693506‑2693685
|
gagTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑g < 2:5631528/92‑1 (MQ=255)
cagTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑g > 1:2939642/1‑93 (MQ=255)
agTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gg < 2:3015832/93‑1 (MQ=255)
agTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gg > 2:2561392/1‑93 (MQ=255)
agTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gg > 2:2093802/1‑93 (MQ=255)
agTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gg < 2:175695/93‑1 (MQ=255)
gTTTGTTGATTCGGAATGCCGATAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑ggg < 1:6054682/93‑1 (MQ=255)
gTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑ggg < 2:3116391/93‑1 (MQ=255)
gTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑ggg > 2:2814853/1‑93 (MQ=255)
tttGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gggg < 1:4625383/93‑1 (MQ=255)
tttGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gggg < 1:6077972/93‑1 (MQ=255)
tttGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑gggg < 2:67376/93‑1 (MQ=255)
gttgATTCGGAATGCGGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑ggggggg < 1:1160926/93‑1 (MQ=255)
gATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑ggggggggga > 2:5973372/1‑90 (MQ=255)
tGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTc < 1:6002962/93‑1 (MQ=255)
tccGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCa < 2:1612114/92‑1 (MQ=255)
gCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCa < 2:5942216/93‑1 (MQ=255)
ccGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCAt > 1:1036535/1‑93 (MQ=255)
gACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATta > 1:3432893/1‑93 (MQ=255)
gACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGGCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCAttt > 1:4090214/1‑92 (MQ=255)
aCAGTGCAGGCGGACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCAtttt > 2:5451332/1‑91 (MQ=255)
aCAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATtat < 2:320145/93‑1 (MQ=255)
aCAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATtat > 1:2635499/1‑93 (MQ=255)
cAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATtata < 2:5830695/93‑1 (MQ=255)
tGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAg < 1:6143129/93‑1 (MQ=255)
gCAGGCGAACCACGCAGAATTCCCATCATAAGCCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGa < 2:5483160/93‑1 (MQ=255)
cAGGCGAGCCACGCATAATTTCGATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGaa < 2:1199630/93‑1 (MQ=255)
ggCGAACCACGCAGAATTTCCATCATAAGGCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATc < 1:2832153/93‑1 (MQ=255)
cGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTg < 1:94902/93‑1 (MQ=255)
gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGa < 1:1921027/93‑1 (MQ=255)
gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGa > 2:4972199/1‑93 (MQ=255)
gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGa > 2:6256357/1‑93 (MQ=255)
gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGa > 1:1276908/1‑93 (MQ=255)
aaCCACGCTGAATATCCATAATAAGTCTCTGGTCTTCTAAGCTTTCGGTGTTCCCAAGGGGGGGGG‑AACGGGCTTCATTATAAATAATCTGAt < 2:6110197/93‑1 (MQ=255)
aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGAt < 2:846114/93‑1 (MQ=255)
aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGAt < 1:2293117/93‑1 (MQ=255)
aCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATg < 1:2116204/93‑1 (MQ=255)
aCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATg > 1:1968763/1‑93 (MQ=255)
ccACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGG‑GACGGGCGTCATTATAAAGAATCTGATgcg > 2:6175987/1‑93 (MQ=255)
cACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAACGGGGCGGG‑AACGGGCGTCATTATAAAGAATCTGATgcg > 1:3217924/1‑93 (MQ=255)
ccGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGGGAACGGGCGTCAGTATAAAGAATCTGATgcgc < 2:6154942/92‑1 (MQ=255)
aCGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATgcgc < 2:3766306/93‑1 (MQ=255)
aCGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCt > 2:4285217/1‑93 (MQ=255)
cGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCt < 1:1817642/93‑1 (MQ=255)
cGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCt > 1:247166/1‑93 (MQ=255)
gCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAAGATATGATGTGCTg > 1:5533387/1‑93 (MQ=255)
cAGAATTTCCATCGTAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGa < 2:2751778/93‑1 (MQ=255)
cAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGa < 1:2430709/93‑1 (MQ=255)
aGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACAGGCGTCATTATAAAGAATCTGATGCGCTGAc < 2:1109418/93‑1 (MQ=255)
aaTTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGa > 2:4001636/1‑93 (MQ=255)
aTTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaa > 2:5820959/1‑93 (MQ=255)
tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaaa < 1:354237/93‑1 (MQ=255)
tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaaa < 1:5935574/93‑1 (MQ=255)
tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAc > 1:4235947/1‑93 (MQ=255)
tCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAcc < 2:513577/93‑1 (MQ=255)
tCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAcc > 1:6114708/1‑93 (MQ=255)
catcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGt < 1:437818/93‑1 (MQ=255)
atcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGtt < 2:5084685/93‑1 (MQ=255)
atcatAAGCTTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTAACGAAACCGtt < 1:3661118/93‑1 (MQ=255)
tcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGttt < 2:2377897/93‑1 (MQ=255)
catAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTg < 1:415935/93‑1 (MQ=255)
atAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGc < 1:504580/93‑1 (MQ=255)
atAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGc > 2:5369097/1‑93 (MQ=255)
atAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGc < 2:3048057/93‑1 (MQ=255)
tAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCg > 1:3411592/1‑93 (MQ=255)
aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTg < 1:1007031/93‑1 (MQ=255)
aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTg < 1:267794/93‑1 (MQ=255)
aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTg < 1:4746331/93‑1 (MQ=255)
aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTg < 1:3113115/93‑1 (MQ=255)
tctctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGa > 1:6207030/1‑93 (MQ=255)
tctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGaaa > 2:5932060/1‑93 (MQ=255)
ctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAt > 1:4529996/1‑93 (MQ=255)
ctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAt > 2:438721/1‑93 (MQ=255)
ctcGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAt > 2:3382864/1‑93 (MQ=255)
cGTCTTCTAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa > 1:1590654/1‑93 (MQ=255)
tcttctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaaaa > 1:3919228/1‑93 (MQ=255)
ttctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATc > 1:3205630/1‑93 (MQ=255)
ttctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATc > 1:1725227/1‑93 (MQ=255)
tctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa > 2:1850468/1‑93 (MQ=255)
tctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa > 2:6020118/1‑93 (MQ=255)
tctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa > 2:684551/1‑93 (MQ=255)
tctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa > 1:663849/1‑93 (MQ=255)
tctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCa > 1:545444/1‑93 (MQ=255)
ctAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAc > 2:3550176/1‑93 (MQ=255)
tAAGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAcc < 2:1456758/93‑1 (MQ=255)
aaGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCa < 1:1385080/93‑1 (MQ=255)
aaGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCa < 2:4739349/93‑1 (MQ=255)
aaGCTTGCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCa < 1:189174/93‑1 (MQ=255)
aGCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAt > 2:766489/1‑93 (MQ=255)
gCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATc > 1:5298382/1‑93 (MQ=255)
gCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATc < 2:1865894/93‑1 (MQ=255)
gCTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATc < 1:4567432/93‑1 (MQ=255)
cTTTCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCg > 2:2838772/1‑93 (MQ=255)
tttCGGTGTACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGt < 2:6265875/93‑1 (MQ=255)
gtgtACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAtt < 1:2759778/93‑1 (MQ=255)
gtgtACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAtt > 1:1928249/1‑93 (MQ=255)
tgtACCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTa < 1:2418982/93‑1 (MQ=255)
aCCCAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCa > 2:4897483/1‑93 (MQ=255)
cccAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCaa < 1:6256357/93‑1 (MQ=255)
cccAAGGGGGGGGG‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCaa < 1:33730/93‑1 (MQ=255)
|
GCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑GGGGGGGA‑AACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAA > NC_000913/2693506‑2693685
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCC > NC_000913/2693512‑2693696
|
TGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGG < SRR4302533.945116/94‑1 (MQ=60)
TGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGG < SRR4302533.2724238/94‑1 (MQ=60)
GTTGATTCGGAATGCGGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGG < SRR4302533.1167893/94‑1 (MQ=60)
TCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGggaacgg > SRR4302533.5707620/1‑87 (MQ=60)
CGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGggaacggg < SRR4302533.2647805/94‑9 (MQ=60)
CGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGggaacggg > SRR4302533.2258493/1‑86 (MQ=60)
GGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGC < SRR4302533.328628/94‑1 (MQ=60)
GAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCG > SRR4302533.319640/1‑94 (MQ=60)
GAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGgggacgggcg > SRR4302533.5675709/1‑84 (MQ=60)
AATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGT > SRR4302533.4368971/1‑94 (MQ=60)
TGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCA < SRR4302533.6039336/94‑1 (MQ=60)
GCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCAT > SRR4302533.1042628/1‑94 (MQ=60)
CGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTA > SRR4302533.3454101/1‑94 (MQ=60)
CGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTA > SRR4302533.2642991/1‑94 (MQ=60)
CGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGGCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTT > SRR4302533.4115115/1‑94 (MQ=60)
GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGGACGGGCGTCATTAT > SRR4302533.5308969/1‑94 (MQ=60)
GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTAT > SRR4302533.4090194/1‑94 (MQ=60)
GACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTAT > SRR4302533.2651695/1‑94 (MQ=60)
GTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGGACGGGCGTCATTATAAAG > SRR4302533.6217936/1‑94 (MQ=60)
TGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGA < SRR4302533.6180120/94‑1 (MQ=60)
CAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAAT < SRR4302533.5988534/94‑1 (MQ=60)
GGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTCCCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCT < SRR4302533.3277802/94‑1 (MQ=60)
GGCGAACCACGCAGAATTTCCATCATAAGGCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCT < SRR4302533.2849589/94‑1 (MQ=60)
CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGA > SRR4302533.1284583/1‑94 (MQ=60)
CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGA > SRR4302533.1156327/1‑94 (MQ=60)
CGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGA < SRR4302533.95499/94‑1 (MQ=60)
GAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGAT < SRR4302533.1932754/94‑1 (MQ=60)
GAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGAT < SRR4302533.1344681/94‑1 (MQ=60)
AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATG > SRR4302533.1980802/1‑94 (MQ=60)
AACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATG < SRR4302533.2307313/94‑1 (MQ=60)
ACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGC < SRR4302533.2129256/94‑1 (MQ=60)
CCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAC‑‑G‑GGG‑‑CGGGAACGGGCGTCATTATAAAGAATCTGATGCG > SRR4302533.3237766/1‑94 (MQ=60)
ACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCT > SRR4302533.248693/1‑94 (MQ=60)
CGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAagatatgatgtgctg > SRR4302533.5566794/1‑79 (MQ=60)
CGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTG < SRR4302533.1828745/94‑1 (MQ=60)
CAGCATTTTCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGAC < SRR4302533.29932/94‑1 (MQ=60)
CAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGAC < SRR4302533.2445733/94‑1 (MQ=60)
ATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAC > SRR4302533.4261536/1‑94 (MQ=60)
TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAC < SRR4302533.356397/94‑1 (MQ=60)
TTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAAC < SRR4302533.5971459/94‑1 (MQ=60)
TTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC < SRR4302533.1949683/94‑1 (MQ=60)
TTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACC > SRR4302533.6151603/1‑94 (MQ=60)
TCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCG > SRR4302533.4129504/1‑94 (MQ=60)
CCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGT < SRR4302533.6113527/94‑1 (MQ=60)
CATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTT < SRR4302533.440426/94‑1 (MQ=60)
ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT > SRR4302533.1937466/1‑94 (MQ=60)
ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT < SRR4302533.1738985/94‑1 (MQ=60)
ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT < SRR4302533.6150553/94‑1 (MQ=60)
ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT > SRR4302533.1438263/1‑94 (MQ=60)
ATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTT > SRR4302533.5461842/1‑94 (MQ=60)
ATCATAAGCTTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTAACGAAACCGTTT < SRR4302533.3683629/94‑1 (MQ=60)
CATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGC < SRR4302533.418434/94‑1 (MQ=60)
ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCG < SRR4302533.507574/94‑1 (MQ=60)
ATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCG > SRR4302533.3432665/1‑94 (MQ=60)
AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGG < SRR4302533.1012923/94‑1 (MQ=60)
AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGG < SRR4302533.4775109/94‑1 (MQ=60)
AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGG < SRR4302533.269421/94‑1 (MQ=60)
AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGG < SRR4302533.2330276/94‑1 (MQ=60)
AGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGG < SRR4302533.3132260/94‑1 (MQ=60)
GTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGA > SRR4302533.6244253/1‑94 (MQ=60)
CTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAA > SRR4302533.6265507/1‑94 (MQ=60)
CTCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACAGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAA > SRR4302533.3401235/1‑94 (MQ=60)
TCTCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAAT > SRR4302533.4557427/1‑94 (MQ=60)
TCGTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAA > SRR4302533.1600274/1‑94 (MQ=60)
TCGGCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAA < SRR4302533.2466900/94‑1 (MQ=60)
GTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAA > SRR4302533.3943163/1‑94 (MQ=60)
GTCTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGCCATTATAAAGAATCTGATGCGCTGACAAAACCGTTTGCGTGGAAATAAAT > SRR4302533.3226233/1‑94 (MQ=60)
CTTCTAAGCTTTCGGTGTACCNNA‑‑‑GNGGG‑‑GGGGAANGGGCGTCATTATAAANAATCTGNTGCGNTGNCGnnnnnnttnncntnnnnnnnnanna > SRR4302533.2671623/1‑69 (MQ=50)
CTTCTAAGCTTTCGGTGTACCCAAGGGG‑GGG‑‑GGGAA‑‑GGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATC > SRR4302533.3466343/1‑94 (MQ=60)
CTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATC > SRR4302533.3225366/1‑94 (MQ=60)
CTTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATC > SRR4302533.1735697/1‑94 (MQ=60)
TTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCA > SRR4302533.1885229/1‑94 (MQ=60)
TTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCA > SRR4302533.667767/1‑94 (MQ=60)
TTCTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCA > SRR4302533.548684/1‑94 (MQ=60)
CTAAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTTATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACC > SRR4302533.3532971/1‑94 (MQ=60)
AAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAT < SRR4302533.1393414/94‑1 (MQ=60)
AAGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAT < SRR4302533.3568097/94‑1 (MQ=60)
AAGCTTGCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCAT < SRR4302533.190353/94‑1 (MQ=60)
AGCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATC > SRR4302533.5330122/1‑94 (MQ=60)
GCTTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCG < SRR4302533.4595120/94‑1 (MQ=60)
TTTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTG < SRR4302533.2783559/94‑1 (MQ=60)
TTCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGA < SRR4302533.5807467/94‑1 (MQ=60)
TCGGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAA > SRR4302533.2220945/1‑94 (MQ=60)
GGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATT > SRR4302533.1940015/1‑94 (MQ=60)
GGTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATT > SRR4302533.4551467/1‑94 (MQ=60)
GTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCCTTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTA > SRR4302533.1675706/1‑94 (MQ=60)
GTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTA < SRR4302533.4613211/94‑1 (MQ=60)
GTGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTA < SRR4302533.2776692/94‑1 (MQ=60)
TGTACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAG < SRR4302533.2433924/94‑1 (MQ=60)
ACCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAA < SRR4302533.3497401/94‑1 (MQ=60)
CCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAC < SRR4302533.6293771/94‑1 (MQ=60)
CCCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAC < SRR4302533.33958/94‑1 (MQ=60)
CCAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACG < SRR4302533.5635493/94‑1 (MQ=60)
CAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGC > SRR4302533.4930288/1‑94 (MQ=60)
CAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGC < SRR4302533.18508/94‑1 (MQ=60)
CAAG‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGC < SRR4302533.5790907/94‑1 (MQ=60)
G‑‑‑G‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTG < SRR4302533.2932230/94‑1 (MQ=60)
A‑‑‑G‑GGGGCGGGGAACGCGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAAACACCATCGTGAATTAGCAACGCG < SRR4302533.3812899/94‑1 (MQ=60)
aagG‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCG < SRR4302533.4400821/91‑1 (MQ=60)
aagG‑GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCG < SRR4302533.1003628/91‑1 (MQ=60)
GGG‑‑GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCC > SRR4302533.271204/1‑94 (MQ=60)
GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCC > SRR4302533.6008566/1‑94 (MQ=60)
GGGGAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCC < SRR4302533.1019766/94‑1 (MQ=60)
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TGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAA‑‑‑G‑GGG‑‑GGGAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCC > NC_000913/2693512‑2693696
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
