Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,696,865 |
T→C |
P53P (CCT→CCC) |
yfhH → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,696,865 | 0 | T | C | 100.0%
| 687.4
/ NA
| 217 | P53P (CCT→CCC) | yfhH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/102); total (115/102) |
Only 100 of 222 total aligned reads displayed.
GATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGG > NC_000913/2696776‑2696954
|
gATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGAt < 2:4140007/93‑1 (MQ=255)
gATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGAt < 2:1399029/93‑1 (MQ=255)
gATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGAt < 1:808117/93‑1 (MQ=255)
atatGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATa < 1:5686173/93‑1 (MQ=255)
atatGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATa < 1:4119721/93‑1 (MQ=255)
tatGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGacac > 1:1002118/1‑93 (MQ=255)
tatGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATAc < 2:3137132/93‑1 (MQ=255)
tatGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATAc > 1:2564445/1‑93 (MQ=255)
atGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACg < 2:5354434/93‑1 (MQ=255)
tGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACgg > 1:1850119/1‑93 (MQ=255)
aCGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGgcgc < 2:5160378/93‑1 (MQ=255)
ggCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGgcgcgc > 2:1611739/1‑93 (MQ=255)
gCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGcc < 2:808218/93‑1 (MQ=255)
gCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGcc < 2:502086/93‑1 (MQ=255)
cTTACTGCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCa < 1:3101814/93‑1 (MQ=255)
aCTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCAttt < 1:5238186/93‑1 (MQ=255)
cTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTa > 2:5872057/1‑93 (MQ=255)
cTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTa > 1:1245055/1‑93 (MQ=255)
cTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTa < 2:1772419/93‑1 (MQ=255)
ttCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATACAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTaa > 1:3379440/1‑93 (MQ=255)
tCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAg < 1:6057850/93‑1 (MQ=255)
cGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGTTTATCTGCTGCTCCAACCCGATACGGCGCGCCATTTAAGc < 2:1583892/93‑1 (MQ=255)
cGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGc < 1:5543865/93‑1 (MQ=255)
cGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGc < 1:541287/93‑1 (MQ=255)
gTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGct < 1:3895013/93‑1 (MQ=255)
tATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGctc > 1:1156639/1‑93 (MQ=255)
tATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGctc > 2:2333259/1‑93 (MQ=255)
aTCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGAGACGGCGCGCCATTTAAGctct > 2:3529925/1‑93 (MQ=255)
tCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCtctc > 2:250261/1‑93 (MQ=255)
tCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAAACCGATACGGCGCGCCACTTAAGAtctc > 2:2067116/1‑93 (MQ=255)
ccGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCa < 2:1161500/93‑1 (MQ=255)
cGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAg > 1:3667916/1‑93 (MQ=255)
gTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGc > 2:6207020/1‑93 (MQ=255)
aGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAAc > 1:3825861/1‑93 (MQ=255)
cGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTg < 1:6089870/93‑1 (MQ=255)
gTTACCAGGGGCTTGGCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCCTTTAAGCTCTCAGCAACTgg > 2:5474207/1‑93 (MQ=255)
ttACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGc < 1:4043858/93‑1 (MQ=255)
tACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGcc < 1:3253737/93‑1 (MQ=255)
tACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGcc < 1:1490781/93‑1 (MQ=255)
aCCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCa > 2:5113870/1‑93 (MQ=255)
ccAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCaa < 1:1380825/93‑1 (MQ=255)
ccAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCaa > 1:4697802/1‑93 (MQ=255)
cAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAAc > 1:3769566/1‑93 (MQ=255)
aGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAAca > 1:3878289/1‑92 (MQ=255)
aGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACg > 1:423709/1‑93 (MQ=255)
ggggCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGa < 2:2287299/93‑1 (MQ=255)
ggggCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGa > 2:1838404/1‑93 (MQ=255)
ggggCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGa > 1:3125287/1‑93 (MQ=255)
gggCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGaa > 1:3416451/1‑93 (MQ=255)
cTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGcc > 1:5331339/1‑93 (MQ=255)
ttGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCg < 2:5986156/93‑1 (MQ=255)
ttGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCg < 2:5416890/93‑1 (MQ=255)
ttGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCg > 2:3778287/1‑93 (MQ=255)
ccAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagt < 2:4707845/93‑1 (MQ=255)
ccAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagc > 1:3535114/1‑92 (MQ=255)
cAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtc > 1:3448870/1‑93 (MQ=255)
gagTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcag > 2:2024177/1‑93 (MQ=255)
gTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcagtc < 2:358098/93‑1 (MQ=255)
tAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcagtcagtc > 2:5705537/1‑93 (MQ=255)
tAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcagtcagtc > 2:2640854/1‑93 (MQ=255)
tAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcagtcagtc > 1:4722121/1‑93 (MQ=255)
tAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGagtcagtcagtc < 1:2467290/93‑1 (MQ=255)
aaaaaaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTcc < 2:2017757/93‑1 (MQ=255)
aaaaaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCa < 1:2046876/93‑1 (MQ=255)
aaaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGc < 2:5220313/93‑1 (MQ=255)
aaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcg > 1:706039/1‑93 (MQ=255)
aaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcg < 1:4440660/93‑1 (MQ=255)
aaCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcg < 2:4227420/93‑1 (MQ=255)
aCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgt > 2:627302/1‑93 (MQ=255)
aCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgt < 2:2664245/93‑1 (MQ=255)
aCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgt < 2:4049405/93‑1 (MQ=255)
aCTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgt < 1:319379/93‑1 (MQ=255)
cTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgtc > 1:2302137/1‑93 (MQ=255)
cTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAACAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgtc < 1:4616881/93‑1 (MQ=255)
tGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGcgtcg > 1:3053743/1‑93 (MQ=255)
cGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGa < 1:5309644/93‑1 (MQ=255)
ggATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGGGaa < 1:4922360/93‑1 (MQ=255)
gATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAg > 2:5587174/1‑93 (MQ=255)
aTTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGt < 2:4735184/93‑1 (MQ=255)
aTTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGt < 2:3633919/93‑1 (MQ=255)
ttATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGtt > 1:5961912/1‑93 (MQ=255)
ttATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGtt > 1:5915901/1‑93 (MQ=255)
tATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTc < 1:2184631/93‑1 (MQ=255)
tATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTc < 2:6068359/93‑1 (MQ=255)
tCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTcgc < 2:4856459/93‑1 (MQ=255)
tCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGGTcgc > 2:5800421/1‑93 (MQ=255)
ctgctgCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTcgcg > 2:1524466/1‑93 (MQ=255)
tgctgcTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCgcgc > 2:506666/1‑93 (MQ=255)
tgctgcTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCgcgc < 2:4081383/93‑1 (MQ=255)
gctgctACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCa > 1:167829/1‑93 (MQ=255)
ctgctACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCaa < 2:4480597/93‑1 (MQ=255)
ctgctACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCaa < 2:2890741/93‑1 (MQ=255)
gctACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCaaaa > 2:3268466/1‑93 (MQ=255)
tACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAAc < 2:4025330/93‑1 (MQ=255)
aCAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACt < 1:2840877/93‑1 (MQ=255)
cAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTc > 2:72506/1‑93 (MQ=255)
aaCCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCg < 2:3383712/93‑1 (MQ=255)
aCCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGACGTTCGCGCAAAAACTCgg > 1:950632/1‑93 (MQ=255)
aCCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCgg < 1:2712392/93‑1 (MQ=255)
aCCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCgg < 2:1960587/93‑1 (MQ=255)
|
GATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGG > NC_000913/2696776‑2696954
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCT > NC_000913/2696772‑2696956
|
GAAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCC < SRR4302533.5840838/94‑1 (MQ=60)
AAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCG < SRR4302533.454339/94‑1 (MQ=60)
AAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCG < SRR4302533.305221/94‑1 (MQ=60)
AAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCG > SRR4302533.799537/1‑94 (MQ=60)
GATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATA < SRR4302533.812866/94‑1 (MQ=60)
ATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATAC < SRR4302533.4144740/94‑1 (MQ=60)
ATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATAC > SRR4302533.2580227/1‑94 (MQ=60)
ATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATAC < SRR4302533.5720517/94‑1 (MQ=60)
ATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGACAC > SRR4302533.1007969/1‑94 (MQ=60)
TATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACG > SRR4302533.2292142/1‑94 (MQ=60)
ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGG < SRR4302533.3860669/94‑1 (MQ=60)
ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGG > SRR4302533.678108/1‑94 (MQ=60)
ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGG > SRR4302533.3838309/1‑94 (MQ=60)
ATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGG > SRR4302533.1861403/1‑94 (MQ=60)
GAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCG < SRR4302533.1150775/94‑1 (MQ=60)
GAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCG < SRR4302533.3904408/94‑1 (MQ=60)
CTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCAT > SRR4302533.5360585/1‑94 (MQ=60)
CTTACTGCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCAT < SRR4302533.3120884/94‑1 (MQ=60)
TTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATT > SRR4302533.3093770/1‑94 (MQ=60)
TTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATT < SRR4302533.5644585/94‑1 (MQ=60)
ACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTA > SRR4302533.1252489/1‑94 (MQ=60)
ACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTA < SRR4302533.5269682/94‑1 (MQ=60)
CTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATACAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAA > SRR4302533.3400302/1‑94 (MQ=60)
CTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAA < SRR4302533.5292565/94‑1 (MQ=60)
TCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGC < SRR4302533.6094528/94‑1 (MQ=60)
CGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCT < SRR4302533.544507/94‑1 (MQ=60)
CGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCT < SRR4302533.5577348/94‑1 (MQ=60)
GTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTC > SRR4302533.1163577/1‑94 (MQ=60)
GTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTC < SRR4302533.3918778/94‑1 (MQ=60)
ATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTC > SRR4302533.1169076/1‑94 (MQ=60)
CCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAG < SRR4302533.1652785/94‑1 (MQ=60)
CCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAG > SRR4302533.3690460/1‑94 (MQ=60)
CCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAG < SRR4302533.244283/94‑1 (MQ=60)
CCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAG < SRR4302533.5687797/94‑1 (MQ=60)
GTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCA > SRR4302533.2995480/1‑94 (MQ=60)
GTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCA > SRR4302533.5997492/1‑94 (MQ=60)
CAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAAC > SRR4302533.2963371/1‑94 (MQ=60)
CAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAAC > SRR4302533.3849250/1‑94 (MQ=60)
AGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACT > SRR4302533.6116329/1‑94 (MQ=60)
CGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGG < SRR4302533.6126680/94‑1 (MQ=60)
GTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGC > SRR4302533.3138749/1‑94 (MQ=60)
GTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGC > SRR4302533.1362957/1‑94 (MQ=60)
TTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCC < SRR4302533.4068472/94‑1 (MQ=60)
TACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCA < SRR4302533.1499772/94‑1 (MQ=60)
TACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCA < SRR4302533.3273802/94‑1 (MQ=60)
ACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAA < SRR4302533.5387197/94‑1 (MQ=60)
ACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAA > SRR4302533.4726279/1‑94 (MQ=60)
CCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAAC > SRR4302533.674698/1‑94 (MQ=60)
CCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAAC > SRR4302533.3792676/1‑94 (MQ=60)
CCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAAC < SRR4302533.1389139/94‑1 (MQ=60)
CAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACG > SRR4302533.426244/1‑94 (MQ=60)
CAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACA > SRR4302533.3901956/1‑94 (MQ=60)
AGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGA > SRR4302533.3144495/1‑94 (MQ=60)
GGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAA > SRR4302533.3437558/1‑94 (MQ=60)
GGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGC < SRR4302533.5943150/94‑1 (MQ=60)
GGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGC > SRR4302533.259008/1‑94 (MQ=60)
GCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCC > SRR4302533.5363294/1‑94 (MQ=60)
GCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAG < SRR4302533.2167795/94‑1 (MQ=60)
CCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGC > SRR4302533.3556899/1‑94 (MQ=60)
CCCAGAGTGATAAAAAACTGGCGGATTATCAGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGT > SRR4302533.3405641/1‑94 (MQ=60)
CCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTC > SRR4302533.3470163/1‑94 (MQ=60)
CCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTC < SRR4302533.1645298/94‑1 (MQ=60)
GAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGT > SRR4302533.5296785/1‑94 (MQ=60)
GTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCA > SRR4302533.5576187/1‑94 (MQ=60)
GTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCA > SRR4302533.34553/1‑94 (MQ=60)
TGATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAG > SRR4302533.3753447/1‑94 (MQ=60)
ATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTC > SRR4302533.4750752/1‑94 (MQ=60)
ATAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTC < SRR4302533.4729905/94‑1 (MQ=60)
TAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCC < SRR4302533.2482509/94‑1 (MQ=60)
TAAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCC > SRR4302533.4201692/1‑94 (MQ=60)
AAAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCA < SRR4302533.1879857/94‑1 (MQ=60)
AAAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAG < SRR4302533.2059499/94‑1 (MQ=60)
AAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCGATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGC > SRR4302533.3398347/1‑94 (MQ=60)
AAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGC < SRR4302533.3209380/94‑1 (MQ=60)
AAAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGC < SRR4302533.3603839/94‑1 (MQ=60)
AAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCG < SRR4302533.1433364/94‑1 (MQ=60)
AAACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCG > SRR4302533.710207/1‑94 (MQ=60)
AACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGT < SRR4302533.4467507/94‑1 (MQ=60)
ACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTC > SRR4302533.2316400/1‑94 (MQ=60)
ACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTC > SRR4302533.2457413/1‑94 (MQ=60)
ACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTC < SRR4302533.321336/94‑1 (MQ=60)
ACTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTC > SRR4302533.4049819/1‑94 (MQ=60)
CTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCG > SRR4302533.3072452/1‑94 (MQ=60)
CTGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAACAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCG < SRR4302533.4644837/94‑1 (MQ=60)
TGGCGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGT > SRR4302533.901541/1‑94 (MQ=60)
CGGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAA < SRR4302533.5341463/94‑1 (MQ=60)
GGATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGGGAAG < SRR4302533.4952178/94‑1 (MQ=60)
ATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTT < SRR4302533.4080678/94‑1 (MQ=60)
ATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTT > SRR4302533.5997980/1‑94 (MQ=60)
ATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTT > SRR4302533.3664244/1‑94 (MQ=60)
ATTATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTT > SRR4302533.5951655/1‑94 (MQ=60)
TATCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCG < SRR4302533.2198098/94‑1 (MQ=60)
TCTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCG < SRR4302533.6052819/94‑1 (MQ=60)
CTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGC > SRR4302533.2838738/1‑94 (MQ=60)
CTGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGC > SRR4302533.1713305/1‑94 (MQ=60)
TGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCA > SRR4302533.168890/1‑94 (MQ=60)
TGCTGCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCA > SRR4302533.3954676/1‑94 (MQ=60)
GCTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAA > SRR4302533.4515471/1‑94 (MQ=60)
CTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAAC > SRR4302533.4947563/1‑94 (MQ=60)
CTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAAC < SRR4302533.470769/94‑1 (MQ=60)
CTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAAC < SRR4302533.4477680/94‑1 (MQ=60)
CTACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAAC < SRR4302533.4370061/94‑1 (MQ=60)
ACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTC > SRR4302533.2545986/1‑94 (MQ=60)
ACAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTC < SRR4302533.2858362/94‑1 (MQ=60)
CAACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGGTCGCGCAAAAACTCG > SRR4302533.4971283/1‑94 (MQ=60)
AACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGACGTTCGCGCAAAAACTCGG > SRR4302533.956214/1‑94 (MQ=60)
AACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGG > SRR4302533.3269360/1‑94 (MQ=60)
AACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGG > SRR4302533.3305866/1‑94 (MQ=60)
AACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGG > SRR4302533.3486975/1‑94 (MQ=60)
ACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGC < SRR4302533.2729046/94‑1 (MQ=60)
ACCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGC < SRR4302533.757333/94‑1 (MQ=60)
CCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCT > SRR4302533.2698359/1‑94 (MQ=60)
CCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCT > SRR4302533.2964439/1‑94 (MQ=60)
CCCGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCT < SRR4302533.1151613/94‑1 (MQ=60)
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GAAAGATATGAACGGCTTACTTCGTATCCGTCAGCGTTACCAGGGGCTTGCCCAGAGTGATAAAAAACTGGCGGATTATCTGCTGCTACAACCTGATACGGCGCGCCATTTAAGCTCTCAGCAACTGGCCAACGAAGCCGGAGTCAGTCAGTCCAGCGTCGTGAAGTTCGCGCAAAAACTCGGCT > NC_000913/2696772‑2696956
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
