Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1548 369.5 20095359 96.9% 19472402 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,699,813 T→C E226G (GAA→GGA)  recO ← RecO

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,699,8130TC99.7% 1017.5 / ‑5.1 315E226G (GAA→GGA) recORecO
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (183/131);  total (183/132)
Fisher's exact test for biased strand distribution p-value = 4.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01

Only 100 of 333 total aligned reads displayed.

GTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTTCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAG  >  NC_000913/2699723‑2699900
                                                                                          |                                                                                       
gTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTccc                                                                                       >  2:7852722/1‑93 (MQ=255)
 ttGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTcccc                                                                                      <  1:5870064/93‑1 (MQ=255)
 ttGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTcccc                                                                                      >  1:7653386/1‑93 (MQ=255)
  tGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCt                                                                                     >  1:2589229/1‑93 (MQ=255)
  tGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCt                                                                                     <  2:3596287/93‑1 (MQ=255)
   gACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTg                                                                                    >  2:6406278/1‑93 (MQ=255)
    aCGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGc                                                                                   <  1:6487234/93‑1 (MQ=255)
       ccTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAACCTGCCGGAACAGTCCCCTGctct                                                                                >  1:894057/1‑93 (MQ=255)
        cTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCtt                                                                               <  2:2233636/93‑1 (MQ=255)
        cTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCtt                                                                               <  2:2115506/93‑1 (MQ=255)
        cTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCA‑CGTTCGCTTAGGTCTAAACTGCCGGAACAGTCCCCTGCTCttt                                                                              >  1:1582161/1‑93 (MQ=255)
         tAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCttt                                                                              >  1:5588979/1‑93 (MQ=255)
         tAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCttt                                                                              >  2:7441481/1‑93 (MQ=255)
          aaCAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTa                                                                             >  1:8658004/1‑93 (MQ=255)
           aCAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTaa                                                                            >  1:4943182/1‑93 (MQ=255)
                aaTTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGtt                                                                       <  2:8609750/93‑1 (MQ=255)
                aaTGCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGtt                                                                       >  2:9836795/1‑93 (MQ=255)
                 aTTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGttt                                                                      >  2:2976401/1‑93 (MQ=255)
                  ttCATCCATGACAATCCTCATCATTCATAATGGGTTTTCACCGTTCGCTTAGGAATAAACTGCCGGAACAGTAAACTGCTCTTTAAAGGATTa                                                                     >  2:8330432/1‑93 (MQ=255)
                  ttCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTa                                                                     >  1:998744/1‑93 (MQ=255)
                   tCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAc                                                                    <  1:66312/93‑1 (MQ=255)
                    cAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAcc                                                                   <  1:9636802/93‑1 (MQ=255)
                      gCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGc                                                                 >  1:6101091/1‑93 (MQ=255)
                      gCCATGACAATCCTCATCATTCATAATGTGTTTTCACAGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGc                                                                 >  1:7095069/1‑93 (MQ=255)
                       ccATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGcc                                                                >  1:5927089/1‑93 (MQ=255)
                         aTGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCaa                                                              <  1:381024/93‑1 (MQ=255)
                         aTGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCaa                                                              >  1:1758323/1‑93 (MQ=255)
                          tGACAATCCTCATCATTCATAGTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAg                                                             >  2:7548438/1‑93 (MQ=255)
                          tGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAg                                                             >  1:3183979/1‑93 (MQ=255)
                          tGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAg                                                             >  1:2078522/1‑93 (MQ=255)
                            aCAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGAt                                                           >  1:1246670/1‑93 (MQ=255)
                             cAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATa                                                          <  2:2878958/93‑1 (MQ=255)
                             cAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATa                                                          <  2:8757281/93‑1 (MQ=255)
                             cAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATa                                                          >  1:3447760/1‑93 (MQ=255)
                              aaTCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATAc                                                         >  2:2387970/1‑93 (MQ=255)
                              aaTCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATAc                                                         <  1:1141027/93‑1 (MQ=255)
                              aaTCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATAc                                                         <  1:7546013/93‑1 (MQ=255)
                               aTCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACg                                                        >  2:6875744/1‑93 (MQ=255)
                                 ccTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGc                                                      <  2:7040491/93‑1 (MQ=255)
                                 ccTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGc                                                      <  1:584222/93‑1 (MQ=255)
                                  cTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCt                                                     >  2:1505531/1‑93 (MQ=255)
                                  cTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCt                                                     >  1:2436549/1‑93 (MQ=255)
                                   tcatcaTTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCtt                                                    >  2:1766876/1‑93 (MQ=255)
                                   tcatcaTTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCtt                                                    <  1:6004373/93‑1 (MQ=255)
                                    catcatTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTa                                                   >  2:6247700/1‑93 (MQ=255)
                                      tcattcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAg                                                 >  1:8034306/1‑93 (MQ=255)
                                       cattcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgc                                                >  2:3444916/1‑93 (MQ=255)
                                        attcatAATGTGTTTTTACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcg                                               >  2:8978187/1‑93 (MQ=255)
                                        attcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcg                                               >  2:2658684/1‑93 (MQ=255)
                                         ttcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcgc                                              >  2:6279584/1‑93 (MQ=255)
                                         ttcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcgc                                              >  2:122288/1‑93 (MQ=255)
                                         ttcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcgc                                              >  2:7645432/1‑93 (MQ=255)
                                         ttcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAgcgc                                              >  1:9160588/1‑93 (MQ=255)
                                          tcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGcc                                             >  2:821044/1‑93 (MQ=255)
                                          tcatAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGcc                                             >  2:4536015/1‑93 (MQ=255)
                                           catAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCa                                            >  1:4606317/1‑93 (MQ=255)
                                            atAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCAt                                           >  1:4423602/1‑93 (MQ=255)
                                              aaTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGc                                         <  2:5746665/93‑1 (MQ=255)
                                              aaTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGc                                         >  2:4386324/1‑93 (MQ=255)
                                              aaTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGc                                         <  2:5820140/93‑1 (MQ=255)
                                              aaTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGc                                         <  1:3690492/93‑1 (MQ=255)
                                               aTGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCg                                        >  2:1687203/1‑93 (MQ=255)
                                                tgtgTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCgg                                       >  1:10037688/1‑93 (MQ=255)
                                                      ttCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAg                                 <  1:5211297/93‑1 (MQ=255)
                                                      ttCACCGTTCGCTGAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAg                                 <  2:962754/93‑1 (MQ=255)
                                                        cACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCg                               >  1:2840439/1‑93 (MQ=255)
                                                        cACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCg                               >  2:5002821/1‑93 (MQ=255)
                                                          ccGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGtt                             >  2:1188629/1‑93 (MQ=255)
                                                           cGTTCGCATAGGCATAAACTGCCAGAACAGTCCCCTGCTCTTTAAAGCTTTGCCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGttt                            <  1:7448937/93‑1 (MQ=255)
                                                            gTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTc                           >  2:7280038/1‑93 (MQ=255)
                                                            gTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTc                           >  2:5854418/1‑93 (MQ=255)
                                                              tCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTcgc                         >  1:6385423/1‑93 (MQ=255)
                                                                gCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCgcgg                       <  2:9229778/93‑1 (MQ=255)
                                                                 cTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCgcggc                      >  2:9799379/1‑93 (MQ=255)
                                                                 cTTAGGCATAAACTGCCGGAACAGGCCCCTGCTCTTTAAAGGGTTACCGCCAAGATACGGCTTAAGCGCCAGGCGGGTAAAGCGTTTGgcggg                      >  1:2974972/1‑92 (MQ=255)
                                                                  ttAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCgcggcg                     >  2:7967651/1‑93 (MQ=255)
                                                                   tAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGtcgc                    >  2:4173842/1‑93 (MQ=255)
                                                                     ggCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGgcgcgc                  >  2:196584/1‑93 (MQ=255)
                                                                     ggCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGgcgcgc                  <  1:622074/93‑1 (MQ=255)
                                                                     ggCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGgcgcgc                  <  2:654916/93‑1 (MQ=255)
                                                                      gCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCa                 <  2:8544166/93‑1 (MQ=255)
                                                                       cATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAg                <  1:9681597/93‑1 (MQ=255)
                                                                        aTAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgt               <  1:8266856/93‑1 (MQ=255)
                                                                        aTAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgt               >  1:9855535/1‑93 (MQ=255)
                                                                         tAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtg              >  1:9281553/1‑93 (MQ=255)
                                                                         tAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtg              >  2:5325688/1‑93 (MQ=255)
                                                                         tAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtg              >  1:2127807/1‑93 (MQ=255)
                                                                         tAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtg              >  2:1853658/1‑93 (MQ=255)
                                                                          aaaCTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtgt             <  1:1955/93‑1 (MQ=255)
                                                                           aaCTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtgtg            <  1:10002147/93‑1 (MQ=255)
                                                                           aaCTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtgtg            <  1:5058998/93‑1 (MQ=255)
                                                                            aCTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtgtgt           >  1:3865486/1‑93 (MQ=255)
                                                                            aCTGCCGGAACAGTCCCCTGCTCGTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAgtgtgt           <  2:5535438/93‑1 (MQ=255)
                                                                             cTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTc          <  1:4681071/93‑1 (MQ=255)
                                                                                ccGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGc       >  1:3390530/1‑93 (MQ=255)
                                                                                ccGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGc       <  2:3383106/93‑1 (MQ=255)
                                                                                  ggAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGCGTGTCTGCGt     >  1:6712613/1‑93 (MQ=255)
                                                                                   gAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTc    >  2:6623892/1‑93 (MQ=255)
                                                                                    aaCAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCCGCGCGCAGTGTGTCTGCGTCa   >  2:9346259/1‑93 (MQ=255)
                                                                                     aCAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAg  >  2:1384958/1‑93 (MQ=255)
                                                                                          |                                                                                       
GTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTTCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAG  >  NC_000913/2699723‑2699900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATGTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTTCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  NC_000913/2699720‑2699906
                                                                                             |                                                                                             
AATGTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTC                                                                                               >  SRR4302540.3175325/1‑94 (MQ=60)
 ATGTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCC                                                                                              >  SRR4302540.2791402/1‑94 (MQ=60)
 ATGTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCC                                                                                              >  SRR4302540.5458704/1‑94 (MQ=60)
   TTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCC                                                                                            <  SRR4302540.8261599/94‑1 (MQ=60)
   GTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCC                                                                                            <  SRR4302540.10126288/94‑1 (MQ=60)
   GTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCC                                                                                            >  SRR4302540.7739544/1‑94 (MQ=60)
   GTTGACGCCTAACAGTAATTCAAGCATGACAATCCTCCTCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCC                                                                                            <  SRR4302540.1748255/94‑1 (MQ=60)
    TTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCT                                                                                           >  SRR4302540.2617143/1‑94 (MQ=60)
    TTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCT                                                                                           >  SRR4302540.2617144/1‑94 (MQ=60)
    TTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCT                                                                                           <  SRR4302540.6090800/94‑1 (MQ=60)
    TTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCT                                                                                           <  SRR4302540.5934950/94‑1 (MQ=60)
     TGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTG                                                                                          >  SRR4302540.6570317/1‑94 (MQ=60)
     TGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAAATGCCGGAACAGTCCCCTG                                                                                          <  SRR4302540.4307339/94‑1 (MQ=60)
     TGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGAGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTG                                                                                          >  SRR4302540.3897843/1‑94 (MQ=60)
       ACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCT                                                                                        <  SRR4302540.6559378/94‑1 (MQ=60)
        CGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTC                                                                                       >  SRR4302540.2108047/1‑94 (MQ=60)
         GCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAACCTGCCGGAACAGTCCCCTGCTCT                                                                                      >  SRR4302540.903557/1‑94 (MQ=60)
         GCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCT                                                                                      <  SRR4302540.5496723/94‑1 (MQ=60)
         GCCTAACAGTAAGTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTGACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCT                                                                                      <  SRR4302540.5496724/94‑1 (MQ=60)
          CCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTT                                                                                     >  SRR4302540.7684607/1‑94 (MQ=60)
          CCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCA‑CGTTCGCTTAGGTCTAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.1599445/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.1857604/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.2426948/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.2726401/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.5920073/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.5650487/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.4113827/1‑94 (MQ=60)
           CTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTT                                                                                    >  SRR4302540.10049136/1‑94 (MQ=60)
            TAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTA                                                                                   <  SRR4302540.4894042/94‑1 (MQ=60)
            TAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTA                                                                                   >  SRR4302540.8758575/1‑94 (MQ=60)
             AACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAA                                                                                  >  SRR4302540.3729909/1‑94 (MQ=60)
             AACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAA                                                                                  >  SRR4302540.4996536/1‑94 (MQ=60)
               CAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAG                                                                                >  SRR4302540.9362246/1‑94 (MQ=60)
                AGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGG                                                                               >  SRR4302540.9173980/1‑94 (MQ=60)
                AGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGG                                                                               >  SRR4302540.9173981/1‑94 (MQ=60)
                AGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGG                                                                               <  SRR4302540.7407216/94‑1 (MQ=60)
                 GTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGT                                                                              >  SRR4302540.7907092/1‑94 (MQ=60)
                 GTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGT                                                                              >  SRR4302540.7292590/1‑94 (MQ=60)
                 GTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGT                                                                              >  SRR4302540.1250803/1‑94 (MQ=60)
                  TAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACATTCCCCTGCTCTTTAAAGGTT                                                                             <  SRR4302540.6171170/94‑1 (MQ=60)
                  TAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTT                                                                             <  SRR4302540.1316238/94‑1 (MQ=60)
                   AATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTATAAAGGTTT                                                                            <  SRR4302540.3446868/94‑1 (MQ=60)
                   AATTCAGCCATGACAAACCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTT                                                                            <  SRR4302540.2082108/94‑1 (MQ=60)
                    ATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTA                                                                           <  SRR4302540.5824825/94‑1 (MQ=60)
                    ATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTA                                                                           >  SRR4302540.1008896/1‑94 (MQ=60)
                     TTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAC                                                                          <  SRR4302540.3806436/94‑1 (MQ=60)
                     TTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAC                                                                          >  SRR4302540.3471121/1‑94 (MQ=60)
                     TTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAC                                                                          <  SRR4302540.9331623/94‑1 (MQ=60)
                     TTCAGCCATGACAATACTCATCATTCATAATGTGTTTTCGCCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTAC                                                                          <  SRR4302540.5060314/94‑1 (MQ=60)
                      TCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACC                                                                         <  SRR4302540.66984/94‑1 (MQ=60)
                      TCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACC                                                                         <  SRR4302540.199490/94‑1 (MQ=60)
                       CAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCG                                                                        <  SRR4302540.9750335/94‑1 (MQ=60)
                        AGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGC                                                                       >  SRR4302540.4636908/1‑94 (MQ=60)
                        AGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGC                                                                       >  SRR4302540.5958927/1‑94 (MQ=60)
                        AGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGC                                                                       >  SRR4302540.6169021/1‑94 (MQ=60)
                        AGCCATGACAATCCTCATCATTCATAATGTGTTTTCACAGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGC                                                                       >  SRR4302540.7174028/1‑94 (MQ=60)
                         GCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCC                                                                      >  SRR4302540.5992576/1‑94 (MQ=60)
                         GCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCC                                                                      >  SRR4302540.3259660/1‑94 (MQ=60)
                           CATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAA                                                                    >  SRR4302540.1777382/1‑94 (MQ=60)
                            ATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAG                                                                   >  SRR4302540.3218574/1‑94 (MQ=60)
                            ATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAG                                                                   <  SRR4302540.2284087/94‑1 (MQ=60)
                            ATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAG                                                                   >  SRR4302540.2100861/1‑94 (MQ=60)
                            ATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAG                                                                   <  SRR4302540.384965/94‑1 (MQ=60)
                              GACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGAT                                                                 >  SRR4302540.1259391/1‑94 (MQ=60)
                              GACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGAT                                                                 >  SRR4302540.5970964/1‑94 (MQ=60)
                               ACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATA                                                                >  SRR4302540.3485261/1‑94 (MQ=60)
                                CAATCCTCATCATTCATAATGTGTTTTCCCCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTcagcttttcccgccaagatag                                                               >  SRR4302540.2925949/1‑73 (MQ=60)
                                CAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCGCTTTAAAGGTTTACCGCCAAGATAC                                                               <  SRR4302540.5948259/94‑1 (MQ=60)
                                 AATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACG                                                              <  SRR4302540.1152956/94‑1 (MQ=60)
                                 AATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACG                                                              >  SRR4302540.604948/1‑94 (MQ=60)
                                 AATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACG                                                              <  SRR4302540.7630584/94‑1 (MQ=60)
                                  ATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCACGATACGG                                                             >  SRR4302540.8383528/1‑94 (MQ=60)
                                  ATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGC                                                             >  SRR4302540.6772255/1‑94 (MQ=60)
                                    CCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCT                                                           >  SRR4302540.2462791/1‑94 (MQ=60)
                                    CCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCT                                                           <  SRR4302540.590534/94‑1 (MQ=60)
                                    CCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCT                                                           >  SRR4302540.9846631/1‑94 (MQ=60)
                                     CTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTT                                                          >  SRR4302540.901966/1‑94 (MQ=60)
                                     CTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTT                                                          >  SRR4302540.2595861/1‑94 (MQ=60)
                                      TCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTA                                                         <  SRR4302540.6070936/94‑1 (MQ=60)
                                      TCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTA                                                         <  SRR4302540.6070937/94‑1 (MQ=60)
                                       CATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAA                                                        >  SRR4302540.3060235/1‑94 (MQ=60)
                                        ATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAG                                                       >  SRR4302540.8127699/1‑94 (MQ=60)
                                        ATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAG                                                       >  SRR4302540.3286229/1‑94 (MQ=60)
                                          CATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCG                                                     >  SRR4302540.5851865/1‑94 (MQ=60)
                                          CATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCG                                                     >  SRR4302540.5908494/1‑94 (MQ=60)
                                           ATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGC                                                    >  SRR4302540.9270535/1‑94 (MQ=60)
                                           ATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGC                                                    >  SRR4302540.1818768/1‑94 (MQ=60)
                                           ATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGC                                                    >  SRR4302540.6000948/1‑94 (MQ=60)
                                            TTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCC                                                   >  SRR4302540.10083205/1‑94 (MQ=60)
                                            TTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCC                                                   <  SRR4302540.3861703/94‑1 (MQ=60)
                                            TTCATAATGGGTTTTCACCGTTCGCTTAGGCATAATCTGCCGGAAGAGTACCCTGCTCTTTAAAGGcttagtgctacggtccggcttacgccac                                                   >  SRR4302540.5098839/1‑66 (MQ=60)
                                             TCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCA                                                  >  SRR4302540.4655790/1‑94 (MQ=60)
                                              CATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCAT                                                 >  SRR4302540.4471530/1‑94 (MQ=60)
                                              CATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCAT                                                 >  SRR4302540.6301870/1‑94 (MQ=60)
                                               ATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATG                                                >  SRR4302540.8123579/1‑94 (MQ=60)
                                               ATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATG                                                >  SRR4302540.1041860/1‑94 (MQ=60)
                                               ATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATG                                                >  SRR4302540.4739423/1‑94 (MQ=60)
                                                TAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGC                                               >  SRR4302540.6508172/1‑94 (MQ=60)
                                                TAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGC                                               >  SRR4302540.4667293/1‑94 (MQ=60)
                                                TAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGC                                               >  SRR4302540.3552781/1‑94 (MQ=60)
                                                TAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGC                                               >  SRR4302540.2048394/1‑94 (MQ=60)
                                                 AATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCG                                              <  SRR4302540.3730800/94‑1 (MQ=60)
                                                  ATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGG                                             >  SRR4302540.10154412/1‑94 (MQ=60)
                                                   TGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGG                                            <  SRR4302540.6638063/94‑1 (MQ=60)
                                                    GTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGT                                           <  SRR4302540.5589037/94‑1 (MQ=60)
                                                      GTTTTCACCGTTCGCTTAGGCATGAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAA                                         <  SRR4302540.138071/94‑1 (MQ=60)
                                                      GTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAACGGTTTACCGCCAAGATACGCCTTACGCGACATGCGGGTAA                                         >  SRR4302540.4218488/1‑94 (MQ=60)
                                                      GTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAA                                         <  SRR4302540.8765250/94‑1 (MQ=60)
                                                        TTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAG                                       <  SRR4302540.9635579/94‑1 (MQ=60)
                                                        TTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAG                                       <  SRR4302540.657124/94‑1 (MQ=60)
                                                         TTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGC                                      <  SRR4302540.5268078/94‑1 (MQ=60)
                                                         TTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGC                                      >  SRR4302540.9757956/1‑94 (MQ=60)
                                                         TTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGC                                      <  SRR4302540.2120435/94‑1 (MQ=60)
                                                         TTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGC                                      <  SRR4302540.5267857/94‑1 (MQ=60)
                                                          TCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCG                                     >  SRR4302540.2871174/1‑94 (MQ=60)
                                                           CACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGT                                    >  SRR4302540.488047/1‑94 (MQ=60)
                                                           CACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGT                                    >  SRR4302540.7082581/1‑94 (MQ=60)
                                                            ACCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTT                                   >  SRR4302540.1673156/1‑94 (MQ=60)
                                                             CCGTTCGCTTAGGCATAAACTGTAAGAACAGTCCCCTGCTCTTTCAAGGTTTATCTCCAAGATACGccttaccggccgtcagacaacaactgtt                                  >  SRR4302540.2645254/1‑66 (MQ=24)
                                                             CCGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGAGGGAAAAGCGTTT                                  >  SRR4302540.2645253/1‑94 (MQ=60)
                                                              CGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTC                                 <  SRR4302540.9423644/94‑1 (MQ=60)
                                                              CGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTC                                 <  SRR4302540.5148952/94‑1 (MQ=60)
                                                              CGTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTC                                 >  SRR4302540.3752597/1‑94 (MQ=60)
                                                              CGTTCGCATAGGCATAAACTGCCAGAACAGTCCCCTGCTCTTTAAAGCTTTGCCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTC                                 <  SRR4302540.7531958/94‑1 (MQ=60)
                                                               GTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCG                                >  SRR4302540.6466191/1‑94 (MQ=60)
                                                               GTTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCG                                <  SRR4302540.1256302/94‑1 (MQ=60)
                                                                TTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTGCCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGC                               <  SRR4302540.5201040/94‑1 (MQ=60)
                                                                TTCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGC                               >  SRR4302540.6456507/1‑94 (MQ=60)
                                                                 TCGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCG                              <  SRR4302540.2891528/94‑1 (MQ=60)
                                                                  CGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGG                             >  SRR4302540.1282420/1‑94 (MQ=60)
                                                                  CGCTTAGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGG                             >  SRR4302540.7648535/1‑94 (MQ=60)
                                                                   GCTTAGGCATAAACTGCCGGAACAGGCCCCTGCTCTTTAAAGGGTTACCGCCAAGATACGGCTTAAGCGCCAGGCGGGTAAAGCGTTTGGCGGG                            >  SRR4302540.3007857/1‑94 (MQ=60)
                                                                       AGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCTAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGC                        >  SRR4302540.755918/1‑94 (MQ=60)
                                                                       AGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGC                        >  SRR4302540.8822950/1‑94 (MQ=60)
                                                                       AGGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGC                        >  SRR4302540.9844987/1‑94 (MQ=60)
                                                                        GGCATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCA                       <  SRR4302540.628694/94‑1 (MQ=60)
                                                                          CATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGT                     >  SRR4302540.10146663/1‑94 (MQ=60)
                                                                          CATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGT                     <  SRR4302540.9795506/94‑1 (MQ=60)
                                                                          CATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGT                     >  SRR4302540.9970715/1‑94 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    >  SRR4302540.753683/1‑94 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    >  SRR4302540.2150636/1‑94 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    <  SRR4302540.8362912/94‑1 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    <  SRR4302540.8157454/94‑1 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    >  SRR4302540.9392488/1‑94 (MQ=60)
                                                                           ATAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTG                    >  SRR4302540.7976327/1‑94 (MQ=60)
                                                                            TAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGT                   <  SRR4302540.6223193/94‑1 (MQ=60)
                                                                            TAAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGT                   <  SRR4302540.6223191/94‑1 (MQ=60)
                                                                             AAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTG                  >  SRR4302540.9764264/1‑94 (MQ=60)
                                                                             AAACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTG                  <  SRR4302540.1974/94‑1 (MQ=60)
                                                                              AACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGT                 <  SRR4302540.10118662/94‑1 (MQ=60)
                                                                              AACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGT                 <  SRR4302540.5113697/94‑1 (MQ=60)
                                                                              AACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGT                 >  SRR4302540.3907504/1‑94 (MQ=60)
                                                                               ACTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTC                >  SRR4302540.7479368/1‑94 (MQ=60)
                                                                                CTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCT               <  SRR4302540.6292400/94‑1 (MQ=60)
                                                                                CTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCT               <  SRR4302540.10090318/94‑1 (MQ=60)
                                                                                CTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCT               <  SRR4302540.2518132/94‑1 (MQ=60)
                                                                                CTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCT               <  SRR4302540.4731149/94‑1 (MQ=60)
                                                                                CTGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCT               >  SRR4302540.3550314/1‑94 (MQ=60)
                                                                                 TGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTG              <  SRR4302540.4489407/94‑1 (MQ=60)
                                                                                 TGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTG              >  SRR4302540.8520689/1‑94 (MQ=60)
                                                                                 TGCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTG              <  SRR4302540.3203857/94‑1 (MQ=60)
                                                                                  GCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGC             <  SRR4302540.3089906/94‑1 (MQ=60)
                                                                                  GCCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGC             >  SRR4302540.3427523/1‑94 (MQ=60)
                                                                                   GCGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCG            <  SRR4302540.1039647/94‑1 (MQ=60)
                                                                                    CGGAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGCGTGTCTGCGT           >  SRR4302540.6786687/1‑94 (MQ=60)
                                                                                      GAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCA         <  SRR4302540.4730175/94‑1 (MQ=60)
                                                                                      GAACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCA         <  SRR4302540.9446862/94‑1 (MQ=60)
                                                                                       AACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAG        >  SRR4302540.6785396/1‑94 (MQ=60)
                                                                                        ACAGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGG       <  SRR4302540.7069375/94‑1 (MQ=60)
                                                                                          AGTCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAA     >  SRR4302540.697094/1‑94 (MQ=60)
                                                                                            TCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAAT   >  SRR4302540.3710587/1‑94 (MQ=60)
                                                                                            TCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAAT   <  SRR4302540.187914/94‑1 (MQ=60)
                                                                                            TCCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAAT   >  SRR4302540.7602910/1‑94 (MQ=60)
                                                                                             CCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  SRR4302540.6076183/1‑94 (MQ=60)
                                                                                             CCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  SRR4302540.1784767/1‑94 (MQ=60)
                                                                                             CCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  SRR4302540.6076184/1‑94 (MQ=60)
                                                                                             CCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  SRR4302540.1784768/1‑94 (MQ=60)
                                                                                             |                                                                                             
AATGTTGACGCCTAACAGTAATTCAGCCATGACAATCCTCATCATTCATAATGTGTTTTCACCGTTCGCTTAGGCATAAACTGCCGGAACAGTTCCCTGCTCTTTAAAGGTTTACCGCCAAGATACGGCTTAAGCGCCATGCGGGTAAAGCGTTTCGCGGCGCGCAGTGTGTCTGCGTCAGGAAATT  >  NC_000913/2699720‑2699906

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑