Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,748,983 |
T→C |
A44A (GCT→GCC) |
yfjB → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,748,983 | 0 | T | C | 100.0%
| 680.1
/ NA
| 212 | A44A (GCT→GCC) | yfjB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (104/108); total (104/108) |
Only 100 of 214 total aligned reads displayed.
ACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACG > NC_000913/2748893‑2749071
|
aCGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCa < 1:111306/93‑1 (MQ=255)
aCGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCa < 1:4724609/93‑1 (MQ=255)
cGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCAc < 1:5558488/93‑1 (MQ=255)
cGGCACCCCACGGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCAc < 1:1582986/93‑1 (MQ=255)
gCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGa > 1:3314263/1‑93 (MQ=255)
cACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGaa < 2:6253648/93‑1 (MQ=255)
cACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGaa > 2:4685720/1‑93 (MQ=255)
cACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGaa < 1:2190018/93‑1 (MQ=255)
aCCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAAc > 2:5597036/1‑93 (MQ=255)
aCCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAAc > 2:3657178/1‑93 (MQ=255)
ccccACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACt > 2:1437294/1‑93 (MQ=255)
ccACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGc > 2:948229/1‑93 (MQ=255)
ccACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGc < 2:5340369/93‑1 (MQ=255)
ccACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGc < 2:520872/93‑1 (MQ=255)
ccACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGc < 2:1854049/93‑1 (MQ=255)
cactgcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCa < 2:2184379/93‑1 (MQ=255)
actgcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCaa < 1:563678/93‑1 (MQ=255)
actgcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCaa < 2:2753530/93‑1 (MQ=255)
ctgcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAAc > 1:1209717/1‑93 (MQ=255)
ctgcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAAc > 1:376921/1‑93 (MQ=255)
gcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTg > 1:5911897/1‑93 (MQ=255)
gcactgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTg > 2:3272185/1‑93 (MQ=255)
cctgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTgaa < 2:1024783/92‑1 (MQ=255)
actgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTgaa < 2:237930/93‑1 (MQ=255)
ctgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTgaag > 1:1760401/1‑93 (MQ=255)
tgACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTgaaga > 1:2659085/1‑93 (MQ=255)
gACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTgaagaa > 2:2219900/1‑93 (MQ=255)
aacaCATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAAtgt < 1:2352164/93‑1 (MQ=255)
acacATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAAtgtg < 1:3192340/93‑1 (MQ=255)
acaTGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGaa > 2:215529/1‑93 (MQ=255)
aTGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGaaaa < 2:6200539/93‑1 (MQ=255)
aTGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGaaaa < 2:2449443/93‑1 (MQ=255)
tGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAAc < 1:1982210/93‑1 (MQ=255)
tGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTCCAACTGAAGAATGTGAAAAc > 1:6071699/1‑93 (MQ=255)
aaaTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTg > 1:5121426/1‑93 (MQ=255)
aaTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTgg > 2:3805870/1‑93 (MQ=255)
aaTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTgg < 2:3164224/93‑1 (MQ=255)
aaTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTgg > 1:1364312/1‑93 (MQ=255)
aaTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTgg < 2:4373674/93‑1 (MQ=255)
aTGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGc < 1:3006926/93‑1 (MQ=255)
tGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCa < 1:5028381/93‑1 (MQ=255)
gCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCAc < 2:717884/93‑1 (MQ=255)
tctACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGc > 2:1265594/1‑93 (MQ=255)
tctACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGc > 1:2586508/1‑93 (MQ=255)
tctACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGc > 1:101312/1‑93 (MQ=255)
tctACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAACGTGAAAACTGGCACGc > 1:5883374/1‑93 (MQ=255)
ctACCGCTGGCTGTGCACAAAAGGTTACGAGATCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCt > 2:828216/1‑93 (MQ=255)
tACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTc > 2:536545/1‑93 (MQ=255)
aCCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTcg > 1:222031/1‑93 (MQ=255)
gctggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCgg > 1:4904519/1‑93 (MQ=255)
ctggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGga < 2:1589229/93‑1 (MQ=255)
tggctgTGCCCAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgag > 2:1657187/1‑93 (MQ=255)
tggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgag > 1:3516662/1‑93 (MQ=255)
tggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgag > 2:3068002/1‑93 (MQ=255)
tggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgag > 1:5243185/1‑93 (MQ=255)
ggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgaga < 2:6245425/93‑1 (MQ=255)
ggctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGgaga < 2:1204472/93‑1 (MQ=255)
gctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGAt < 2:626632/93‑1 (MQ=255)
ctgTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGAtt < 2:4266393/93‑1 (MQ=255)
gtgCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTgg < 1:1476767/93‑1 (MQ=255)
gtgCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTgg < 1:5389355/93‑1 (MQ=255)
gCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGc > 2:4969595/1‑93 (MQ=255)
caAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAAc < 1:455298/93‑1 (MQ=255)
aaaaGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACt < 2:3228071/93‑1 (MQ=255)
aaaGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTa < 2:5906539/93‑1 (MQ=255)
gTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTg > 1:4118139/1‑93 (MQ=255)
gTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTg > 1:156050/1‑93 (MQ=255)
gTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTg < 2:1164992/93‑1 (MQ=255)
ttACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGa < 1:706938/93‑1 (MQ=255)
tACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAt < 1:4753280/93‑1 (MQ=255)
aCGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAATTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAtc < 2:3424541/93‑1 (MQ=255)
cGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAtct < 1:2118995/93‑1 (MQ=255)
gAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAtctc < 1:4666164/93‑1 (MQ=255)
gAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAtctc > 1:750807/1‑93 (MQ=255)
aGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTcg > 2:3365146/1‑93 (MQ=255)
aGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTcg > 1:4175269/1‑93 (MQ=255)
ggTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGATGATCTcgc > 2:299863/1‑93 (MQ=255)
cATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGTGGAGATTGGGCAACTAGCTGATCTCGCGGt < 2:3553678/93‑1 (MQ=255)
tCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAg > 1:1831010/1‑93 (MQ=255)
tCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAg > 2:4468574/1‑93 (MQ=255)
cGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGt < 1:4459538/93‑1 (MQ=255)
cGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGt > 1:3683086/1‑93 (MQ=255)
gTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTc > 1:5086465/1‑93 (MQ=255)
ttGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCg > 2:4544732/1‑93 (MQ=255)
ttGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCg < 2:1783370/93‑1 (MQ=255)
tGAGCAACAAATCGCCCACGAACTGTAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGt > 1:1196295/1‑93 (MQ=255)
tGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGt < 1:2912959/93‑1 (MQ=255)
tGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGt < 1:3615933/93‑1 (MQ=255)
atcaacaaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtg < 2:2869580/91‑1 (MQ=255)
gCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtgg > 2:5687617/1‑93 (MQ=255)
caacaaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtggt > 2:2513664/1‑93 (MQ=255)
aacaaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtggtg > 2:3960771/1‑93 (MQ=255)
acaaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtggtgg < 2:3779689/93‑1 (MQ=255)
acaaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTtggtgg > 2:875472/1‑93 (MQ=255)
caaATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGc > 2:4124551/1‑93 (MQ=255)
aaaTCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCg > 1:3557582/1‑93 (MQ=255)
aaTCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGa < 1:4348799/93‑1 (MQ=255)
aaTCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGa > 2:2293966/1‑93 (MQ=255)
aTCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGAc < 1:6180940/93‑1 (MQ=255)
tCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACg < 1:3293219/93‑1 (MQ=255)
|
ACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACG > NC_000913/2748893‑2749071
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTAAT > NC_000913/2748891‑2749076
|
CCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCC < SRR4302533.2837049/94‑1 (MQ=60)
CCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCC > SRR4302533.5915733/1‑94 (MQ=60)
CACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCA < SRR4302533.3577646/94‑1 (MQ=60)
CACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCA < SRR4302533.3732346/94‑1 (MQ=60)
ACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCAC < SRR4302533.112010/94‑1 (MQ=60)
ACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCAC < SRR4302533.2242003/94‑1 (MQ=60)
ACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCAC < SRR4302533.4753256/94‑1 (MQ=60)
CGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACG < SRR4302533.3321421/94‑1 (MQ=60)
CGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACG < SRR4302533.5592082/94‑1 (MQ=60)
CGGCACCCCACGGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACG < SRR4302533.1592526/94‑1 (MQ=60)
GGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGA > SRR4302533.3334725/1‑94 (MQ=60)
GCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAA < SRR4302533.3205325/94‑1 (MQ=60)
CACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAAC < SRR4302533.2203510/94‑1 (MQ=60)
ACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACT < SRR4302533.5260887/94‑1 (MQ=60)
CCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTG > SRR4302533.1133756/1‑94 (MQ=60)
CCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCA > SRR4302533.3910000/1‑94 (MQ=60)
ACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAAC < SRR4302533.567017/94‑1 (MQ=60)
ACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAAC > SRR4302533.1216980/1‑94 (MQ=60)
ACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAAC > SRR4302533.379194/1‑94 (MQ=60)
CTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACT < SRR4302533.5067426/94‑1 (MQ=60)
TGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTG > SRR4302533.5947620/1‑94 (MQ=60)
TGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTG > SRR4302533.2219199/1‑94 (MQ=60)
TGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTG < SRR4302533.4844734/94‑1 (MQ=60)
CACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAA > SRR4302533.472395/1‑94 (MQ=60)
ACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAG > SRR4302533.1771128/1‑94 (MQ=60)
CTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGA > SRR4302533.2675418/1‑94 (MQ=60)
TGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAA < SRR4302533.925333/94‑1 (MQ=60)
GACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGCAT < SRR4302533.6125286/94‑1 (MQ=60)
CAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGT > SRR4302533.2099149/1‑94 (MQ=60)
CAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGT < SRR4302533.4591788/94‑1 (MQ=60)
AACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTG < SRR4302533.2366715/94‑1 (MQ=60)
ACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGA < SRR4302533.3211979/94‑1 (MQ=60)
ACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAA > SRR4302533.3590522/1‑94 (MQ=60)
ATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTCCAACTGAAGAATGTGAAAAC > SRR4302533.6108431/1‑94 (MQ=60)
TGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACT < SRR4302533.1994343/94‑1 (MQ=60)
TGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACT > SRR4302533.146930/1‑94 (MQ=60)
GAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTG > SRR4302533.5152369/1‑94 (MQ=60)
AAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGG > SRR4302533.1372507/1‑94 (MQ=60)
AATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGC < SRR4302533.714953/94‑1 (MQ=60)
ATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCA < SRR4302533.1089352/94‑1 (MQ=60)
ATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCA < SRR4302533.3025318/94‑1 (MQ=60)
TGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCAC < SRR4302533.701267/94‑1 (MQ=60)
TGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCAC < SRR4302533.5058829/94‑1 (MQ=60)
TGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCAC > SRR4302533.2413547/1‑94 (MQ=60)
CTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGC > SRR4302533.101941/1‑94 (MQ=60)
CTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGC > SRR4302533.2602409/1‑94 (MQ=60)
CTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAACGTGAAAACTGGCACGC > SRR4302533.5918928/1‑94 (MQ=60)
TACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATGGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCG > SRR4302533.4173211/1‑94 (MQ=60)
TACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCG > SRR4302533.223420/1‑94 (MQ=60)
ACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGC > SRR4302533.1863263/1‑94 (MQ=60)
CGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGG > SRR4302533.4934238/1‑94 (MQ=60)
CGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGG > SRR4302533.4968469/1‑94 (MQ=60)
CGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGG > SRR4302533.5146797/1‑94 (MQ=60)
CTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAG < SRR4302533.1211521/94‑1 (MQ=60)
CTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAG < SRR4302533.4485333/94‑1 (MQ=60)
CTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAG > SRR4302533.5274701/1‑94 (MQ=60)
CTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAG > SRR4302533.5951160/1‑94 (MQ=60)
CTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAG > SRR4302533.3538342/1‑94 (MQ=60)
GGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGAT < SRR4302533.449068/94‑1 (MQ=60)
GCTGTGCACAAAATGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATT < SRR4302533.3575604/94‑1 (MQ=60)
TGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGG > SRR4302533.5809449/1‑94 (MQ=60)
GTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGG < SRR4302533.5421742/94‑1 (MQ=60)
GTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGG < SRR4302533.1485694/94‑1 (MQ=60)
GTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGG < SRR4302533.2187708/94‑1 (MQ=60)
GTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGG < SRR4302533.4216749/94‑1 (MQ=60)
TGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGC > SRR4302533.5636288/1‑94 (MQ=60)
CACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAA > SRR4302533.4754934/1‑94 (MQ=60)
ACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAAC > SRR4302533.1555873/1‑94 (MQ=60)
CAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACT < SRR4302533.2932823/94‑1 (MQ=60)
CAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACT < SRR4302533.5437725/94‑1 (MQ=60)
CAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACT < SRR4302533.3698249/94‑1 (MQ=60)
CAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACT < SRR4302533.593264/94‑1 (MQ=60)
CAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACT < SRR4302533.458019/94‑1 (MQ=60)
AAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTA > SRR4302533.1571377/1‑94 (MQ=60)
AGGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCT > SRR4302533.3391367/1‑94 (MQ=60)
GGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTG > SRR4302533.157044/1‑94 (MQ=60)
GGTTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTG > SRR4302533.4143153/1‑94 (MQ=60)
TTACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGAT < SRR4302533.711113/94‑1 (MQ=60)
TACGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATC < SRR4302533.4782095/94‑1 (MQ=60)
CGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTC < SRR4302533.2132066/94‑1 (MQ=60)
CGAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTC > SRR4302533.755228/1‑94 (MQ=60)
GAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCG > SRR4302533.1837523/1‑94 (MQ=60)
GAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCG > SRR4302533.4200569/1‑94 (MQ=60)
GAGGTCATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCG < SRR4302533.4694435/94‑1 (MQ=60)
CATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTA > SRR4302533.2926644/1‑94 (MQ=60)
CATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTA < SRR4302533.5753419/94‑1 (MQ=60)
ATCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAG > SRR4302533.1842186/1‑94 (MQ=60)
TCGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGT > SRR4302533.3705724/1‑94 (MQ=60)
CGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTC < SRR4302533.4486516/94‑1 (MQ=60)
CGTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTC > SRR4302533.5117200/1‑94 (MQ=60)
GTTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCG < SRR4302533.1317888/94‑1 (MQ=60)
TTGAGCAACAAATCGCCCACGAACTGTAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGT > SRR4302533.1203483/1‑94 (MQ=60)
TTGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGT > SRR4302533.3236313/1‑94 (MQ=60)
TGAGCAACAGATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTT < SRR4302533.3769797/94‑1 (MQ=60)
TGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTT < SRR4302533.2930835/94‑1 (MQ=60)
TGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTT < SRR4302533.3638178/94‑1 (MQ=60)
TGAGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTT > SRR4302533.2375779/1‑94 (MQ=60)
AGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGG < SRR4302533.5345864/94‑1 (MQ=60)
AGCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGG > SRR4302533.1742271/1‑94 (MQ=60)
GCAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGT < SRR4302533.3511561/94‑1 (MQ=60)
CAACAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTG < SRR4302533.1631327/94‑1 (MQ=60)
CAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCG < SRR4302533.2643460/94‑1 (MQ=60)
CAAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCG > SRR4302533.3579504/1‑94 (MQ=60)
AAATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGA > SRR4302533.4936042/1‑94 (MQ=60)
AATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGAC < SRR4302533.4375016/94‑1 (MQ=60)
ATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACG < SRR4302533.6218060/94‑1 (MQ=60)
ATCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACG > SRR4302533.4272962/1‑94 (MQ=60)
TCGCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGG < SRR4302533.3313547/94‑1 (MQ=60)
GCCCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTA > SRR4302533.2059268/1‑94 (MQ=60)
GCCCACGAACAGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTA < SRR4302533.5557760/94‑1 (MQ=60)
CCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTAAT < SRR4302533.6194467/94‑1 (MQ=60)
|
CCACGGCACCCCACTGCACTGACAACACATGAAATGCTCTACCGCTGGCTGTGCACAAAAGGTTACGAGGTCATCGTTGAGCAACAAATCGCTCACGAACTGCAACTGAAGAATGTGAAAACTGGCACGCTCGCGGAGATTGGGCAACTAGCTGATCTCGCGGTAGTCGTTGGTGGCGACGGTAAT > NC_000913/2748891‑2749076
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
