Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,847,139 |
A→G |
G42G (GGT→GGC) |
hycC ← |
membrane‑spanning protein of hydrogenase 3 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,847,139 | 0 | A | G | 100.0%
| 892.3
/ NA
| 273 | G42G (GGT→GGC) | hycC | membrane‑spanning protein of hydrogenase 3 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (123/150); total (123/150) |
Only 100 of 285 total aligned reads displayed.
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTACCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCA > NC_000913/2847052‑2847228
|
cacaTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAAc < 1:2238331/93‑1 (MQ=255)
ccaTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAGCCGTGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAAcc < 1:2442164/92‑1 (MQ=255)
acaTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAAcc < 1:3514436/93‑1 (MQ=255)
caTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACcg < 1:4617583/93‑1 (MQ=255)
aTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACcgc > 2:4520555/1‑93 (MQ=255)
aTCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACcgc > 1:2377414/1‑93 (MQ=255)
tCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACcgcg > 1:896497/1‑93 (MQ=255)
tCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACcgcg > 2:3302045/1‑93 (MQ=255)
gTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACAGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGcgcc > 1:4184813/1‑93 (MQ=255)
ttcccAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCaa < 2:4286740/90‑1 (MQ=255)
ttACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCaa > 2:5302230/1‑93 (MQ=255)
ttACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCaa > 1:5247757/1‑93 (MQ=255)
aCCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAAtt < 1:2011493/93‑1 (MQ=255)
ccAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTc > 2:5420801/1‑93 (MQ=255)
aGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACCGCCAACCGCGCCGCCAATTccc > 1:4695458/1‑92 (MQ=255)
gCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAg < 1:2840682/93‑1 (MQ=255)
aGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATc > 2:3432482/1‑93 (MQ=255)
aGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATc < 2:728618/93‑1 (MQ=255)
aGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATc > 2:5909931/1‑93 (MQ=255)
gcACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAg > 2:5786479/1‑93 (MQ=255)
cACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGc < 2:5640626/93‑1 (MQ=255)
cGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCAc > 2:4156341/1‑93 (MQ=255)
cGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCAc > 1:4431071/1‑93 (MQ=255)
cGCTCACGCCAACCGCGACAGTCAGTACAGGGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCAc < 1:3166973/93‑1 (MQ=255)
cTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACtt > 1:1020245/1‑93 (MQ=255)
tCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTa > 1:2337902/1‑93 (MQ=255)
tCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTa < 1:1625419/93‑1 (MQ=255)
tCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTa > 1:3815534/1‑93 (MQ=255)
ccACGCAAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAACCACTTa < 2:6197679/92‑1 (MQ=255)
gCCACCCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGc < 2:933643/93‑1 (MQ=255)
gCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTCTCCAGCCACTTAACGc > 1:1118520/1‑93 (MQ=255)
gCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGc < 2:4077033/93‑1 (MQ=255)
ccAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCt < 1:1889101/93‑1 (MQ=255)
cAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCtt < 1:4113011/93‑1 (MQ=255)
aCCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCtttt > 1:2733725/1‑93 (MQ=255)
aCCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCtttt < 1:3622836/93‑1 (MQ=255)
ccGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCttttt > 2:2494029/1‑93 (MQ=255)
cgcgCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTg < 1:4048625/93‑1 (MQ=255)
gcCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaa < 1:5630078/93‑1 (MQ=255)
ccAGTCAGTACAGTGAAGCCCGCGTCGGCCGTATACAGACGGCCAACCGCGCGGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaa < 2:158895/93‑1 (MQ=255)
ccAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaa > 1:3234598/1‑93 (MQ=255)
ccAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaa < 1:4394482/93‑1 (MQ=255)
cagtcagtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaag > 2:3507381/1‑93 (MQ=255)
gtcagtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaagaa > 2:334597/1‑93 (MQ=255)
gtcagtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaagaa < 2:5279653/93‑1 (MQ=255)
tcagtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaagaaa < 1:5396767/93‑1 (MQ=255)
tcagtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTgaaaagaaa < 1:5538014/93‑1 (MQ=255)
agtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGaaaagaaaag < 2:3331808/93‑1 (MQ=255)
gtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAaaagaaaaga < 1:1595242/93‑1 (MQ=255)
gtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAaaagaaaaga < 2:4784991/93‑1 (MQ=255)
gtACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAaaagaaaaga < 2:1188654/93‑1 (MQ=255)
aCAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAgaga < 1:1398610/93‑1 (MQ=255)
aCAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAgaga < 1:3977908/93‑1 (MQ=255)
cAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaa > 2:4505369/1‑93 (MQ=255)
cAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaa < 1:3103724/93‑1 (MQ=255)
cAGTGAAGCCCGCGCCTGCCGTATACAGCCTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaa < 2:2237041/93‑1 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCTAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa < 1:3372483/93‑1 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa < 1:614498/93‑1 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa < 2:4350953/93‑1 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa > 2:2565118/1‑93 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa < 2:5225359/93‑1 (MQ=255)
aGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGaaa < 1:6255986/93‑1 (MQ=255)
gTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAt > 2:3177031/1‑93 (MQ=255)
gTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAt < 2:5985284/93‑1 (MQ=255)
tGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATg < 2:6254821/93‑1 (MQ=255)
ggAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATg < 2:2158796/92‑1 (MQ=255)
gAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGc < 2:1962315/93‑1 (MQ=255)
aGCCCGCGGCTGCCGTATACAGACTGCCACCCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCa < 1:2672425/93‑1 (MQ=255)
aGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCa < 2:4667234/93‑1 (MQ=255)
cccGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGa < 1:5190586/93‑1 (MQ=255)
ccGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGaa < 2:4887098/93‑1 (MQ=255)
ccGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGaa < 1:6040446/93‑1 (MQ=255)
ccGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGaa < 1:2764352/93‑1 (MQ=255)
cgcgGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAAc > 2:6070559/1‑93 (MQ=255)
gcgGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACa > 2:2689398/1‑93 (MQ=255)
gcgGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACa < 1:858185/93‑1 (MQ=255)
gcgGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACa < 1:4976983/93‑1 (MQ=255)
ggCTGCCGTATACAGACTGCCAACCGGGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgc < 2:4117832/93‑1 (MQ=255)
ggCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgc < 1:12092/93‑1 (MQ=255)
ggCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgc < 2:1841117/93‑1 (MQ=255)
ggCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgc < 2:1253903/93‑1 (MQ=255)
gCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcg < 2:457437/93‑1 (MQ=255)
tGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggc < 1:257681/93‑1 (MQ=255)
ccGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggcgg < 2:815/93‑1 (MQ=255)
ccGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggcgg > 2:365984/1‑93 (MQ=255)
ccGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggccg < 2:3974254/93‑3 (MQ=255)
cGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggcggc < 1:4351519/93‑1 (MQ=255)
cGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAgcggcggc < 2:2445104/93‑1 (MQ=255)
gTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGACAGAACAgcggcggcg > 1:5004303/1‑93 (MQ=255)
tataCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGa > 1:4245722/1‑93 (MQ=255)
tataCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGa > 1:4268154/1‑93 (MQ=255)
tataCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGa > 1:1938006/1‑93 (MQ=255)
tataCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGa > 2:2857286/1‑93 (MQ=255)
ataCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGAc > 1:5751545/1‑93 (MQ=255)
taCAGACTGCAAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACa > 2:3856005/1‑93 (MQ=255)
cAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACaaa > 1:5794026/1‑93 (MQ=255)
cAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACaaa > 2:3755710/1‑93 (MQ=255)
aGACTGCCACCCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAAc < 1:1267423/93‑1 (MQ=255)
gACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAAcc > 1:3770300/1‑93 (MQ=255)
aCTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAAcca > 1:3285208/1‑93 (MQ=255)
|
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTACCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCA > NC_000913/2847052‑2847228
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTACCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCACGCC > NC_000913/2847046‑2847232
|
GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTG > SRR4302533.1616235/1‑94 (MQ=60)
GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTG > SRR4302533.1627210/1‑94 (MQ=60)
GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTG < SRR4302533.2642121/94‑1 (MQ=60)
GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGCCTGCCGTATACAGACTC > SRR4302533.4672438/1‑94 (MQ=60)
ATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGC < SRR4302533.1629528/94‑1 (MQ=60)
GCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAAC > SRR4302533.2379811/1‑94 (MQ=60)
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACC > SRR4302533.440894/1‑94 (MQ=60)
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACC < SRR4302533.4645970/94‑1 (MQ=60)
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACC < SRR4302533.2252164/94‑1 (MQ=60)
CACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACC > SRR4302533.4361973/1‑94 (MQ=60)
CCATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAGCCGTGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCG < SRR4302533.2457239/94‑1 (MQ=60)
ACATCGTAGCTTACCAGCGACAGCGCCCCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCG < SRR4302533.4584279/94‑1 (MQ=60)
ACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCG > SRR4302533.1937653/1‑94 (MQ=60)
ACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCG < SRR4302533.2707371/94‑1 (MQ=60)
ACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCG < SRR4302533.3536098/94‑1 (MQ=60)
CATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGC < SRR4302533.4645567/94‑1 (MQ=60)
CATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGC > SRR4302533.2392123/1‑94 (MQ=60)
ATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCG > SRR4302533.1606678/1‑94 (MQ=60)
ATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCG > SRR4302533.901760/1‑94 (MQ=60)
ATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCG > SRR4302533.774439/1‑94 (MQ=60)
ATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGACAACCGCG > SRR4302533.3300853/1‑94 (MQ=60)
CGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCC > SRR4302533.530559/1‑94 (MQ=60)
CGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACAGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCC > SRR4302533.4210152/1‑94 (MQ=60)
GTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCG < SRR4302533.1707496/94‑1 (MQ=60)
CTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCCACCGCGCCCCCAA > SRR4302533.427528/1‑94 (MQ=60)
CTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAA > SRR4302533.5279305/1‑94 (MQ=60)
TTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAAT < SRR4302533.5890191/94‑1 (MQ=60)
TTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAAT < SRR4302533.5226659/94‑1 (MQ=60)
ACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTC < SRR4302533.2023886/94‑1 (MQ=60)
ACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTC > SRR4302533.427130/1‑94 (MQ=60)
CCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCC > SRR4302533.2601566/1‑94 (MQ=60)
CAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCA < SRR4302533.3822734/94‑1 (MQ=60)
CAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCA < SRR4302533.444047/94‑1 (MQ=60)
CAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACCGCCAACCGCGCCGCCAATTCCC > SRR4302533.4723913/1‑94 (MQ=60)
AGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAG < SRR4302533.3337553/94‑1 (MQ=60)
AGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAG < SRR4302533.5010161/94‑1 (MQ=60)
GCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGC < SRR4302533.2858166/94‑1 (MQ=60)
CGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCT < SRR4302533.533252/94‑1 (MQ=60)
GACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTA < SRR4302533.5713449/94‑1 (MQ=60)
GACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTA > SRR4302533.727326/1‑94 (MQ=60)
GACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGATA > SRR4302533.6092641/1‑94 (MQ=60)
ACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTAT < SRR4302533.1303625/94‑1 (MQ=60)
GCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCA < SRR4302533.4142090/94‑1 (MQ=60)
GCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCA < SRR4302533.1541007/94‑1 (MQ=60)
CGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCCAATCCAGCTATCCAG > SRR4302533.1377479/1‑94 (MQ=60)
GCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGC > SRR4302533.4043030/1‑94 (MQ=60)
GCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGC > SRR4302533.2712107/1‑94 (MQ=60)
ACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCA > SRR4302533.4008165/1‑94 (MQ=60)
CCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCCGCTATCCAGCCAC > SRR4302533.4457857/1‑94 (MQ=60)
CCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCAC > SRR4302533.4457858/1‑94 (MQ=60)
CGCTCACGCCACCCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACT < SRR4302533.4381515/94‑1 (MQ=60)
CGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACT < SRR4302533.5848001/94‑1 (MQ=60)
CGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACT > SRR4302533.2255872/1‑94 (MQ=60)
CGCTCACGCCAACCGCGACAGTCAGTACAGGGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACT < SRR4302533.3186459/94‑1 (MQ=60)
GCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTT > SRR4302533.1026239/1‑94 (MQ=60)
CTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTA > SRR4302533.3455436/1‑94 (MQ=60)
CTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTA > SRR4302533.3838865/1‑94 (MQ=60)
CTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTA > SRR4302533.5555790/1‑94 (MQ=60)
CTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTA < SRR4302533.1072066/94‑1 (MQ=60)
CTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTA > SRR4302533.2352372/1‑94 (MQ=60)
TCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAA < SRR4302533.1635265/94‑1 (MQ=60)
CACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAAC < SRR4302533.896657/94‑1 (MQ=60)
ACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACG < SRR4302533.2159865/94‑1 (MQ=60)
CGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTCTCCAGCCACTTAACGC > SRR4302533.1125156/1‑94 (MQ=60)
ccaAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCT < SRR4302533.335763/91‑1 (MQ=60)
CCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCT < SRR4302533.4743544/94‑1 (MQ=60)
CCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTT < SRR4302533.1900639/94‑1 (MQ=60)
CCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTT < SRR4302533.276977/94‑1 (MQ=60)
CCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTT > SRR4302533.3531717/1‑94 (MQ=60)
CAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTT > SRR4302533.230689/1‑94 (MQ=60)
CAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTT < SRR4302533.4138007/94‑1 (MQ=60)
CAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTT < SRR4302533.3651481/94‑1 (MQ=60)
CAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTT > SRR4302533.5553252/1‑94 (MQ=60)
CACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTCCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTT < SRR4302533.2401587/94‑1 (MQ=60)
AACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTT < SRR4302533.4232752/94‑1 (MQ=60)
AACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTT < SRR4302533.4174718/94‑1 (MQ=60)
AACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTT > SRR4302533.2750493/1‑94 (MQ=60)
AACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTT < SRR4302533.281704/94‑1 (MQ=60)
ACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTT < SRR4302533.3645131/94‑1 (MQ=60)
ACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTT > SRR4302533.5064151/1‑94 (MQ=60)
CGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGA < SRR4302533.4073281/94‑1 (MQ=60)
CGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGA < SRR4302533.1231851/94‑1 (MQ=60)
GCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAA > SRR4302533.1150205/1‑94 (MQ=60)
GCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAA > SRR4302533.1633476/1‑94 (MQ=60)
GCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAA < SRR4302533.5664124/94‑1 (MQ=60)
GCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAA > SRR4302533.3254529/1‑94 (MQ=60)
CCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAG > SRR4302533.6091815/1‑94 (MQ=60)
CCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAG < SRR4302533.4421014/94‑1 (MQ=60)
AGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAA > SRR4302533.1925046/1‑94 (MQ=60)
acCAGTACAGTTAAGCCCGCGTCTGCCGTAAACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAA < SRR4302533.3646698/92‑1 (MQ=60)
GTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAA > SRR4302533.1169315/1‑94 (MQ=60)
GTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACATAACGCTTTTTGAAAAGAAA > SRR4302533.2986113/1‑94 (MQ=60)
TCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAA < SRR4302533.5429199/94‑1 (MQ=60)
TCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAA < SRR4302533.5571458/94‑1 (MQ=60)
GTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAG < SRR4302533.1604896/94‑1 (MQ=60)
GTACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCAAGCCACTTAACGCTTTTTGAAAAGAAAAGAA > SRR4302533.3547621/1‑94 (MQ=60)
TACAGTGAAGCCGGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGA < SRR4302533.4091378/94‑1 (MQ=60)
ACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAA < SRR4302533.3125539/94‑1 (MQ=60)
ACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAA < SRR4302533.1407039/94‑1 (MQ=60)
ACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAA < SRR4302533.4002126/94‑1 (MQ=60)
ACAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAA < SRR4302533.38447/94‑1 (MQ=60)
CAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAA < SRR4302533.3122807/94‑1 (MQ=60)
CAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAA > SRR4302533.3578908/1‑94 (MQ=60)
CAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAA < SRR4302533.2802515/94‑1 (MQ=60)
CAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAA < SRR4302533.5605628/94‑1 (MQ=60)
CAGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAA < SRR4302533.5729589/94‑1 (MQ=60)
agggaggccgGCGGCTGCCGTATCCAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.4558193/84‑1 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCTAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.3393310/94‑1 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.618109/94‑1 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.1973951/94‑1 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.6293396/94‑1 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT > SRR4302533.3151852/1‑94 (MQ=60)
AGTGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAAT < SRR4302533.4714613/94‑1 (MQ=60)
TGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGC > SRR4302533.3002438/1‑94 (MQ=60)
GGAAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGC < SRR4302533.2531515/94‑1 (MQ=60)
AAGCCCGCGGCTGCCGTATACAGACTGCCACCCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCA < SRR4302533.4128722/94‑1 (MQ=60)
AAGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCA < SRR4302533.2410514/94‑1 (MQ=60)
AGCCCGCGGCTGCCGTATACAGACTGCCACCCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAG < SRR4302533.2688820/94‑1 (MQ=60)
AGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAG > SRR4302533.3273176/1‑94 (MQ=60)
AGCCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAG < SRR4302533.4571446/94‑1 (MQ=60)
CCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAA < SRR4302533.5025841/94‑1 (MQ=60)
CCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAA > SRR4302533.1245638/1‑94 (MQ=60)
CCCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAA < SRR4302533.5221903/94‑1 (MQ=60)
CCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAAC < SRR4302533.2781302/94‑1 (MQ=60)
CCGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAAC < SRR4302533.6077048/94‑1 (MQ=60)
CGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACA < SRR4302533.6231593/94‑1 (MQ=60)
CGCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACA < SRR4302533.214417/94‑1 (MQ=60)
GCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAG < SRR4302533.5007162/94‑1 (MQ=60)
GCGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAG < SRR4302533.863212/94‑1 (MQ=60)
CGGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGC < SRR4302533.5628988/94‑1 (MQ=60)
GGCTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCG < SRR4302533.12186/94‑1 (MQ=60)
CTGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGC > SRR4302533.385004/1‑94 (MQ=60)
TGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCG < SRR4302533.3220871/94‑1 (MQ=60)
TGCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCG < SRR4302533.259247/94‑1 (MQ=60)
GCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGG > SRR4302533.2384526/1‑94 (MQ=60)
GCCGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGG > SRR4302533.4862256/1‑94 (MQ=60)
CGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCG < SRR4302533.87654/94‑1 (MQ=60)
CGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCG < SRR4302533.4377776/94‑1 (MQ=60)
CGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCG > SRR4302533.424902/1‑94 (MQ=60)
CGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCG > SRR4302533.1950699/1‑94 (MQ=60)
CGTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGACAGAACAGCGGCGGCG > SRR4302533.5034631/1‑94 (MQ=60)
CGTATAAAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCG < SRR4302533.5225899/94‑1 (MQ=60)
GTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGA > SRR4302533.4271353/1‑94 (MQ=60)
GTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGA > SRR4302533.6263813/1‑94 (MQ=60)
GTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGA > SRR4302533.4293852/1‑94 (MQ=60)
GTATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGA > SRR4302533.1949821/1‑94 (MQ=60)
TATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGAC > SRR4302533.5786244/1‑94 (MQ=60)
TATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGACAGAACAGCGGCGGCGAC > SRR4302533.5820306/1‑94 (MQ=60)
ATACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACA < SRR4302533.1577770/94‑1 (MQ=60)
ACAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAA > SRR4302533.5829030/1‑94 (MQ=60)
CAGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAAC > SRR4302533.2759298/1‑94 (MQ=60)
AGACTGCCACCCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACC < SRR4302533.1275006/94‑1 (MQ=60)
AGACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACC > SRR4302533.3793415/1‑94 (MQ=60)
GACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCA > SRR4302533.3305486/1‑94 (MQ=60)
GACTGCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCA < SRR4302533.2675134/94‑1 (MQ=60)
GCCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCACGCC > SRR4302533.1679823/1‑94 (MQ=60)
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GATTTGCACATCGTAGCTTACCAGCGACAGCGCACCGCTCACGCCAACCGCGCCAGTCAGTACAGTGAAGCCCGCGGCTGCCGTATACAGACTACCAACCGCGCCGCCAATTCCAGCTATCCAGCCACTTAACGCTTTTTGAAAAGAAAAGAGAAATGCCAGAACAGCGGCGGCGACAAACCACGCC > NC_000913/2847046‑2847232
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
