Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,877,392 |
T→C |
E135G (GAG→GGG) |
b2755 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,877,392 | 0 | T | C | 100.0%
| 806.3
/ NA
| 248 | E135G (GAG→GGG) | b2755 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/133); total (115/133) |
Only 100 of 255 total aligned reads displayed.
TAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGC > NC_000913/2877302‑2877480
|
tAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCCGAGTTGccct > 2:467441/1‑93 (MQ=255)
aGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTa > 1:5764700/1‑93 (MQ=255)
gCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTAc > 1:5667938/1‑93 (MQ=255)
cGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACg < 2:4876930/93‑1 (MQ=255)
cGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACg < 2:3755825/93‑1 (MQ=255)
aCGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGa < 2:5230938/93‑1 (MQ=255)
cGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAg < 1:5355634/93‑1 (MQ=255)
cGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAg < 2:6284352/93‑1 (MQ=255)
cGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAg < 1:5632033/93‑1 (MQ=255)
cGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAg < 1:5970584/93‑1 (MQ=255)
gTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAgc < 2:5775670/93‑1 (MQ=255)
gTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAgc > 2:5378480/1‑93 (MQ=255)
ccattccatGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAgcgc < 2:3363210/93‑1 (MQ=255)
cattccatGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGcc < 2:502736/93‑1 (MQ=255)
attccatGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCg > 2:5786744/1‑93 (MQ=255)
attccatGTCACGCCGTATTGCTTCCCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGACCCACGGATCGCCg > 2:2574639/1‑93 (MQ=255)
ttccatGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCgg < 1:704703/93‑1 (MQ=255)
ccatGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGc < 1:878125/93‑1 (MQ=255)
catGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCa > 2:2402788/1‑93 (MQ=255)
catGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCa < 2:859562/93‑1 (MQ=255)
catGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCa > 1:1296709/1‑93 (MQ=255)
catGTCACGCCGTATTGCTTCACCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCa > 2:3474631/1‑93 (MQ=255)
tGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAgg > 2:2821930/1‑93 (MQ=255)
tGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAgg < 1:1271734/93‑1 (MQ=255)
tGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAgg < 2:3066250/93‑1 (MQ=255)
gTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGgc < 1:4892323/93‑1 (MQ=255)
tCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGgcg > 1:1000038/1‑93 (MQ=255)
cACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGgcgc < 1:6171210/93‑1 (MQ=255)
aCGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCa > 1:1806975/1‑93 (MQ=255)
aCGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCa > 1:2597363/1‑93 (MQ=255)
aCGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCa < 2:1828727/93‑1 (MQ=255)
cGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAg < 1:1736926/93‑1 (MQ=255)
gCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAgg > 2:4174798/1‑93 (MQ=255)
gCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAgg > 1:1774668/1‑93 (MQ=255)
ccGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGt > 2:2211574/1‑93 (MQ=255)
cGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGtt < 2:3652002/93‑1 (MQ=255)
gTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTtc > 1:2662357/1‑93 (MQ=255)
ttGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTcc < 1:4864339/93‑1 (MQ=255)
ttGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTcc < 1:3938410/93‑1 (MQ=255)
ttGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTcc > 1:3831128/1‑93 (MQ=255)
tGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCa < 2:3553792/93‑1 (MQ=255)
cTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCaaa < 1:4346698/93‑1 (MQ=255)
ttCGCCAGAAGTGCGTAGGTTGGCCGCACGCGACTGCGTTCTATACCTCTGAGTTGCCCTACGGAGAGCCGGGCAGGCGCAGGGTCTTCAAAc > 2:5997235/1‑93 (MQ=255)
ttCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAAc < 2:2712283/93‑1 (MQ=255)
ttCGCCAGAAGGGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGTGCCGGGCAGGCGCAGGTTCTCCAAAc > 1:735682/1‑93 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa < 2:6213036/93‑1 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa < 2:1752123/93‑1 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa < 1:5561328/93‑1 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa < 1:5101420/93‑1 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa > 1:4464223/1‑93 (MQ=255)
ccAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGaa < 2:4802215/93‑1 (MQ=255)
cAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAg > 2:5731919/1‑93 (MQ=255)
gAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGtt < 1:5872700/93‑1 (MQ=255)
tGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCaaa > 2:4785746/1‑93 (MQ=255)
gCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAAc < 1:1538517/93‑1 (MQ=255)
gCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAAc < 2:128219/93‑1 (MQ=255)
cGTAGGTTGCCCGCACGCGACTGTCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACa > 2:1212656/1‑93 (MQ=255)
gTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACAt < 1:2438909/93‑1 (MQ=255)
tAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACAtt > 1:1138537/1‑93 (MQ=255)
tAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACAtt < 1:4130988/93‑1 (MQ=255)
aGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCTGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACAttt < 2:6079578/93‑1 (MQ=255)
ggTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACAtttt < 1:3341394/93‑1 (MQ=255)
gTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTta > 2:5333787/1‑93 (MQ=255)
ttGCGCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtac < 1:5467066/93‑1 (MQ=255)
tGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacg < 1:2959397/93‑1 (MQ=255)
cccGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacgta > 1:5231062/1‑93 (MQ=255)
cccGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacgta > 1:5168550/1‑93 (MQ=255)
ccGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacgtac < 1:19783/93‑1 (MQ=255)
ccGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacgtac < 1:2805653/93‑1 (MQ=255)
cGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTtacgtacg > 2:5616672/1‑93 (MQ=255)
gCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGa > 2:144266/1‑93 (MQ=255)
cACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGAc > 1:4198187/1‑93 (MQ=255)
aCGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGAcc < 2:5827635/93‑1 (MQ=255)
gACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCa > 1:4671918/1‑93 (MQ=255)
gACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCa < 1:996306/93‑1 (MQ=255)
aCTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAg < 1:4543162/93‑1 (MQ=255)
aCTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAg > 2:4918777/1‑93 (MQ=255)
aCTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAg > 2:3514906/1‑93 (MQ=255)
tGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGAc > 2:4419701/1‑93 (MQ=255)
gCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACg < 1:2482740/93‑1 (MQ=255)
ccTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGc > 2:3209121/1‑93 (MQ=255)
cTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCa > 1:121622/1‑93 (MQ=255)
ttCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCaa > 1:148242/1‑93 (MQ=255)
ttCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCaa > 1:3998990/1‑93 (MQ=255)
ttCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCaa > 2:4957869/1‑93 (MQ=255)
tCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCaaa < 2:3017583/93‑1 (MQ=255)
tCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCaaa > 1:20619/1‑93 (MQ=255)
cTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAAt < 2:4495768/93‑1 (MQ=255)
tataCCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATc < 1:805113/93‑1 (MQ=255)
ataCCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCt > 1:1016241/1‑93 (MQ=255)
taCCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCtt < 1:2892772/93‑1 (MQ=255)
aCCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTc > 1:3363373/1‑93 (MQ=255)
ccTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCa < 2:3999714/93‑1 (MQ=255)
ctctGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCAt < 2:2597877/93‑1 (MQ=255)
tctGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATc < 1:3546860/93‑1 (MQ=255)
tGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCa < 2:511250/93‑1 (MQ=255)
tGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCa > 1:3795684/1‑93 (MQ=255)
aGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCaga < 2:197765/93‑1 (MQ=255)
gTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCagag < 2:1569756/93‑1 (MQ=255)
gTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCCAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCagac > 1:3661684/1‑92 (MQ=255)
|
TAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGC > NC_000913/2877302‑2877480
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTT > NC_000913/2877300‑2877485
|
CGTAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCC > SRR4302533.2312160/1‑94 (MQ=60)
GTAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCT < SRR4302533.4072441/94‑1 (MQ=60)
TAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTA > SRR4302533.5799489/1‑94 (MQ=60)
AGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTAC > SRR4302533.1294758/1‑94 (MQ=60)
AGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTAC > SRR4302533.4479727/1‑94 (MQ=60)
AGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTAC > SRR4302533.5702175/1‑94 (MQ=60)
CGACGTCCATTCCATGCCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGG > SRR4302533.3688894/1‑94 (MQ=60)
GACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGA < SRR4302533.1801206/94‑1 (MQ=60)
GACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGGGCGTAGGTTGGCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGA > SRR4302533.5690442/1‑94 (MQ=60)
CGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGC < SRR4302533.6006728/94‑1 (MQ=60)
CGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGC < SRR4302533.5666091/94‑1 (MQ=60)
CGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGC < SRR4302533.5387783/94‑1 (MQ=60)
TCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGC < SRR4302533.1265255/94‑1 (MQ=60)
TCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGC > SRR4302533.753971/1‑94 (MQ=60)
TCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGCTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGC > SRR4302533.2724293/1‑94 (MQ=60)
CCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCC < SRR4302533.1269102/94‑1 (MQ=60)
CCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCC < SRR4302533.3873182/94‑1 (MQ=60)
CATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCGTTCTATACCTCTGAGTTGCCCTACGGAGCGCCG < SRR4302533.392494/94‑1 (MQ=60)
ATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGG < SRR4302533.1191817/94‑1 (MQ=60)
ATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGG > SRR4302533.2620885/1‑94 (MQ=60)
TTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGG < SRR4302533.1637155/94‑1 (MQ=60)
TTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGG > SRR4302533.4050506/1‑94 (MQ=60)
TTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGG < SRR4302533.708866/94‑1 (MQ=60)
TTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGG < SRR4302533.2746625/94‑1 (MQ=60)
CCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCA > SRR4302533.1304515/1‑94 (MQ=60)
CCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCA < SRR4302533.883278/94‑1 (MQ=60)
CATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAG < SRR4302533.907496/94‑1 (MQ=60)
TGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGC < SRR4302533.1279341/94‑1 (MQ=60)
TGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGC < SRR4302533.2831378/94‑1 (MQ=60)
TGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGC < SRR4302533.461070/94‑1 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGTTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG < SRR4302533.2506277/94‑1 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG > SRR4302533.565162/1‑94 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG > SRR4302533.853150/1‑94 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG < SRR4302533.4921966/94‑1 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG > SRR4302533.1005875/1‑94 (MQ=60)
GTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCG < SRR4302533.5587556/94‑1 (MQ=60)
CACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCA > SRR4302533.1817972/1‑94 (MQ=60)
CACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCA < SRR4302533.6208296/94‑1 (MQ=60)
CACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCA > SRR4302533.1310050/1‑94 (MQ=60)
CACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCA > SRR4302533.2613324/1‑94 (MQ=60)
ACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAG < SRR4302533.4058676/94‑1 (MQ=60)
CGCGGTCTTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGG < SRR4302533.382172/94‑1 (MQ=60)
CGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGG < SRR4302533.1747465/94‑1 (MQ=60)
CGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGG > SRR4302533.1785477/1‑94 (MQ=60)
CGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGG < SRR4302533.3796461/94‑1 (MQ=60)
CGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATGCCTCTGAGTTGCCCTACGGCGCGCCGGGCAGGCGCAGGTTC > SRR4302533.869943/1‑94 (MQ=60)
CGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTC > SRR4302533.2678702/1‑94 (MQ=60)
CGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTC > SRR4302533.491805/1‑94 (MQ=60)
GTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCT < SRR4302533.4921224/94‑1 (MQ=60)
GTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCT > SRR4302533.5247661/1‑94 (MQ=60)
GTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCT < SRR4302533.461293/94‑1 (MQ=60)
TATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTC > SRR4302533.526423/1‑94 (MQ=60)
ATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCC > SRR4302533.3854549/1‑94 (MQ=60)
TTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCA < SRR4302533.2011195/94‑1 (MQ=60)
TTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCA < SRR4302533.3962450/94‑1 (MQ=60)
TTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCA < SRR4302533.4893815/94‑1 (MQ=60)
CTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAAC < SRR4302533.4372901/94‑1 (MQ=60)
CTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAAC < SRR4302533.5133429/94‑1 (MQ=60)
CTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAAC > SRR4302533.2524578/1‑94 (MQ=60)
CTTCGCCAGAAGGGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGTGCCGGGCAGGCGCAGGTTCTCCAAAC > SRR4302533.740009/1‑94 (MQ=60)
GCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAA > SRR4302533.4491223/1‑94 (MQ=60)
GCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAA > SRR4302533.6028268/1‑94 (MQ=60)
CCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAG < SRR4302533.4537826/94‑1 (MQ=60)
CCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAG < SRR4302533.5594935/94‑1 (MQ=60)
CCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAG < SRR4302533.5132234/94‑1 (MQ=60)
AGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTT < SRR4302533.2392961/94‑1 (MQ=60)
GAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTC < SRR4302533.5908196/94‑1 (MQ=60)
GAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGGTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTC > SRR4302533.3392682/1‑94 (MQ=60)
AGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAA < SRR4302533.662995/94‑1 (MQ=60)
GTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAA > SRR4302533.665765/1‑94 (MQ=60)
GTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAA < SRR4302533.3375949/94‑1 (MQ=60)
GCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACA < SRR4302533.1547782/94‑1 (MQ=60)
GCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACA > SRR4302533.190531/1‑94 (MQ=60)
GTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATT > SRR4302533.1145312/1‑94 (MQ=60)
GTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATT < SRR4302533.2453971/94‑1 (MQ=60)
GTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATT > SRR4302533.530001/1‑94 (MQ=60)
TAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGCGTTGCCCTACGGAGCGCCGGGCAAGCGCAGGTTCTCCAAACCGAAGTTCAAACATTT > SRR4302533.1498204/1‑94 (MQ=60)
TAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTT < SRR4302533.4156062/94‑1 (MQ=60)
TAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTT < SRR4302533.5834750/94‑1 (MQ=60)
AGTTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTT < SRR4302533.1137892/94‑1 (MQ=60)
GGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTA < SRR4302533.3362047/94‑1 (MQ=60)
GGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTA < SRR4302533.2947707/94‑1 (MQ=60)
GTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTAC < SRR4302533.5712251/94‑1 (MQ=60)
TTGCGCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACG < SRR4302533.5500017/94‑1 (MQ=60)
TTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACG < SRR4302533.5435938/94‑1 (MQ=60)
TGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGT < SRR4302533.2977485/94‑1 (MQ=60)
TGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGT < SRR4302533.4177531/94‑1 (MQ=60)
TGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGT > SRR4302533.5485073/1‑94 (MQ=60)
GCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTA > SRR4302533.5199747/1‑94 (MQ=60)
GCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTA > SRR4302533.5262527/1‑94 (MQ=60)
CCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTAC < SRR4302533.754105/94‑1 (MQ=60)
CCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACG < SRR4302533.19917/94‑1 (MQ=60)
CCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACG < SRR4302533.2822921/94‑1 (MQ=60)
CCGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACG < SRR4302533.296721/94‑1 (MQ=60)
CGCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGA < SRR4302533.4425173/94‑1 (MQ=60)
GCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGAC < SRR4302533.3991380/94‑1 (MQ=60)
GCACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGAC > SRR4302533.4223597/1‑94 (MQ=60)
ACGCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCT > SRR4302533.3599803/1‑94 (MQ=60)
GCGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTC > SRR4302533.4246017/1‑94 (MQ=60)
CGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCA > SRR4302533.5128952/1‑94 (MQ=60)
CGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCA > SRR4302533.4700226/1‑94 (MQ=60)
CGACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTCACGTACGACCTTCA > SRR4302533.727795/1‑94 (MQ=60)
GACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAG < SRR4302533.1002123/94‑1 (MQ=60)
GACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAG < SRR4302533.5938900/94‑1 (MQ=60)
ACTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGA < SRR4302533.4570675/94‑1 (MQ=60)
CTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCCAACATTTTACGTACGAACTTCAGAC > SRR4302533.4239910/1‑94 (MQ=60)
CTGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGAC < SRR4302533.145886/94‑1 (MQ=60)
TGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACG > SRR4302533.1666841/1‑94 (MQ=60)
TGCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACG > SRR4302533.2478217/1‑94 (MQ=60)
GCCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGC < SRR4302533.2498045/94‑1 (MQ=60)
CCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCA > SRR4302533.2375379/1‑94 (MQ=60)
CCTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCA > SRR4302533.122389/1‑94 (MQ=60)
CTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAA > SRR4302533.149191/1‑94 (MQ=60)
CTTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAA > SRR4302533.4023335/1‑94 (MQ=60)
TTCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAA > SRR4302533.20756/1‑94 (MQ=60)
TCTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAAT < SRR4302533.1012233/94‑1 (MQ=60)
CTATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATC < SRR4302533.5942256/94‑1 (MQ=60)
TATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCT > SRR4302533.1022214/1‑94 (MQ=60)
TATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCT < SRR4302533.809844/94‑1 (MQ=60)
ATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTT > SRR4302533.5595001/1‑94 (MQ=60)
ATACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTT > SRR4302533.5742336/1‑94 (MQ=60)
TACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTC < SRR4302533.2910552/94‑1 (MQ=60)
TACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTC > SRR4302533.3384154/1‑94 (MQ=60)
TACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTC < SRR4302533.3056737/94‑1 (MQ=60)
ACCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAGCATTTTACGTACGACCTTCAGACGCAAATCTTCA < SRR4302533.1879133/94‑1 (MQ=60)
CCTCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCAT > SRR4302533.3143952/1‑94 (MQ=60)
TCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCC < SRR4302533.1813980/94‑1 (MQ=60)
TCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCC < SRR4302533.3568720/94‑1 (MQ=60)
TCTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCC < SRR4302533.4812584/94‑1 (MQ=60)
CTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCA < SRR4302533.1773122/94‑1 (MQ=60)
CTGAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCA > SRR4302533.3818917/1‑94 (MQ=60)
GAGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGA < SRR4302533.1130645/94‑1 (MQ=60)
AGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAG < SRR4302533.5145260/94‑1 (MQ=60)
AGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAG > SRR4302533.3550998/1‑94 (MQ=60)
AGTTGCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCCAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAC > SRR4302533.3684198/1‑94 (MQ=60)
GCCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAG < SRR4302533.4313145/94‑1 (MQ=60)
CCCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGT > SRR4302533.719393/1‑94 (MQ=60)
CCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTT < SRR4302533.284056/94‑1 (MQ=60)
CCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTT > SRR4302533.192183/1‑94 (MQ=60)
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CGTAGCGACGTCCATTCCATGTCACGCCGTATTGCTTCGCCAGAAGTGCGTAGGTTGCCCGCACGCGACTGCCTTCTATACCTCTGAGTTGCTCTACGGAGCGCCGGGCAGGCGCAGGTTCTCCAAACCGAAGTTCAAACATTTTACGTACGACCTTCAGACGCAAATCTTCATCCAGAGCAAGTT > NC_000913/2877300‑2877485
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
