Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,885,388 |
A→G |
intergenic (‑146/+213) |
ygcB ← / ← cysH |
hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,885,388 | 0 | A | G | 100.0%
| 627.6
/ NA
| 193 | intergenic (‑146/+213) | ygcB/cysH | hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/107); total (86/107) |
Only 100 of 196 total aligned reads displayed.
ATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACC > NC_000913/2885298‑2885477
|
aTGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCg > 2:48373/1‑93 (MQ=255)
tgctgcTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAgcgc < 2:2801679/93‑1 (MQ=255)
gctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCt > 1:1515353/1‑93 (MQ=255)
gctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCt < 2:5366224/93‑1 (MQ=255)
ctgctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTg < 1:2900268/93‑1 (MQ=255)
gctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGc > 1:6125145/1‑93 (MQ=255)
ctCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGcc > 1:5634597/1‑93 (MQ=255)
cATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTc < 1:4773567/93‑1 (MQ=255)
cATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTc < 2:2903980/93‑1 (MQ=255)
aTAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCa < 1:397827/93‑1 (MQ=255)
tAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAg < 2:2503611/93‑1 (MQ=255)
tAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAg < 1:4164301/93‑1 (MQ=255)
tAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAg < 1:3470980/93‑1 (MQ=255)
aaaTATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAgg < 2:647637/93‑1 (MQ=255)
atatCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGtt < 1:1431453/93‑1 (MQ=255)
tCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGAt > 2:1752650/1‑93 (MQ=255)
cGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATa < 1:2640290/93‑1 (MQ=255)
gAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAg > 2:5977524/1‑93 (MQ=255)
aaTTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGa > 1:3203780/1‑93 (MQ=255)
aaTTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGa > 1:1174176/1‑93 (MQ=255)
ttACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGaaa < 2:1718370/93‑1 (MQ=255)
ttACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGaaa > 1:5440750/1‑93 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAata < 2:1377223/93‑1 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAata < 2:1320952/93‑1 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAata < 1:6002299/93‑1 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAata < 2:4667933/93‑1 (MQ=255)
aCAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAata > 1:5120522/1‑93 (MQ=255)
cAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAatat < 1:1114063/93‑1 (MQ=255)
cAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAatat < 1:6219033/93‑1 (MQ=255)
cAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAatat < 2:354837/93‑1 (MQ=255)
aGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATc > 1:4683402/1‑93 (MQ=255)
gTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCg > 2:663230/1‑93 (MQ=255)
tGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGc < 1:525378/93‑1 (MQ=255)
atatACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCt < 1:5008801/93‑1 (MQ=255)
atatACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCt > 2:2408740/1‑93 (MQ=255)
atatACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCt < 2:2765116/93‑1 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg > 2:4270778/1‑93 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg > 1:1868024/1‑93 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg < 2:4260203/93‑1 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg > 1:1384804/1‑93 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg < 2:6010431/93‑1 (MQ=255)
tataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTg > 1:2660056/1‑93 (MQ=255)
ataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTgg < 2:5801150/93‑1 (MQ=255)
ataCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTgg < 2:5016970/93‑1 (MQ=255)
taCACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTggg > 1:5678371/1‑93 (MQ=255)
acacATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTgggg < 2:5277832/93‑1 (MQ=255)
cacaTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGc < 2:3819437/93‑1 (MQ=255)
acaTGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCt < 2:3870885/93‑1 (MQ=255)
gTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTg > 2:806567/1‑93 (MQ=255)
gTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTg < 2:495574/93‑1 (MQ=255)
tCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGt > 2:692124/1‑93 (MQ=255)
cTTGCCTCCCTGCAAAGAAGAGACTAACACTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTc < 1:5205711/93‑1 (MQ=255)
gCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCAt < 1:2151397/93‑1 (MQ=255)
ccTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATc < 1:2414688/93‑1 (MQ=255)
tCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg > 2:2027263/1‑93 (MQ=255)
tCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTg > 2:2707242/1‑93 (MQ=255)
cccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTgg > 2:2311668/1‑93 (MQ=255)
cccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTgg > 2:3494309/1‑93 (MQ=255)
ccTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGa > 2:1215733/1‑93 (MQ=255)
cTGCAAAGAAGAGACTAACATTCGAATTTTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGaa > 1:1013976/1‑93 (MQ=255)
cTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGaa < 2:3868205/93‑1 (MQ=255)
cTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGaa > 1:3341370/1‑93 (MQ=255)
agaagaGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgc > 2:376803/1‑93 (MQ=255)
agaagaGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTcgc < 2:4383803/93‑1 (MQ=255)
atagaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa < 1:815958/91‑1 (MQ=255)
agagACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa > 1:4652668/1‑93 (MQ=255)
agagACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGaa > 1:4361588/1‑93 (MQ=255)
gagaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAt < 1:3159679/93‑1 (MQ=255)
gaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 1:3721178/1‑93 (MQ=255)
gaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 1:5858287/1‑93 (MQ=255)
gaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 2:520131/1‑93 (MQ=255)
gaCTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGc > 2:1429321/1‑93 (MQ=255)
tAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa > 2:1859494/1‑93 (MQ=255)
tAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTa < 2:747986/93‑1 (MQ=255)
aaCATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTaa < 2:4098586/93‑1 (MQ=255)
aaCATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTaa < 2:2638262/93‑1 (MQ=255)
aCATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAAc < 2:295419/93‑1 (MQ=255)
cATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACg > 2:3625060/1‑93 (MQ=255)
aTTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGc > 1:2497/1‑93 (MQ=255)
ttCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc < 1:4214152/93‑1 (MQ=255)
ttCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc > 2:3102332/1‑93 (MQ=255)
ttCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGcc > 1:3605538/1‑93 (MQ=255)
cGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAg < 2:317794/93‑1 (MQ=255)
gAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGa < 1:4945207/93‑1 (MQ=255)
aaTTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAc < 1:6222955/93‑1 (MQ=255)
aTTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACa < 1:5898196/93‑1 (MQ=255)
ttGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg > 1:978976/1‑93 (MQ=255)
ttGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAg > 1:6298366/1‑93 (MQ=255)
gTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGcc > 2:1187288/1‑93 (MQ=255)
tttGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCt > 1:5735675/1‑93 (MQ=255)
gggTTCGAGCGCTGGCCTCTGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCaa > 2:6154315/1‑93 (MQ=255)
gggTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCaa > 2:3961024/1‑93 (MQ=255)
gggTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCaa < 1:4857152/93‑1 (MQ=255)
ggTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAg > 2:4537636/1‑93 (MQ=255)
ggTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAg < 1:3812013/93‑1 (MQ=255)
ttCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCa > 2:1280488/1‑93 (MQ=255)
tCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAc < 1:2952002/93‑1 (MQ=255)
cGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAcc < 2:2601708/93‑1 (MQ=255)
cGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAcc < 2:2579452/93‑1 (MQ=255)
cGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCAcc > 2:5524017/1‑93 (MQ=255)
|
ATGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACC > NC_000913/2885298‑2885477
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC > NC_000913/2885299‑2885481
|
TGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCT > SRR4302533.1524480/1‑94 (MQ=60)
GCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTG < SRR4302533.4713341/94‑1 (MQ=60)
GCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTG < SRR4302533.2977135/94‑1 (MQ=60)
CTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGG < SRR4302533.2918087/94‑1 (MQ=60)
CTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGG < SRR4302533.6176195/94‑1 (MQ=60)
CTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGG < SRR4302533.1485258/94‑1 (MQ=60)
TGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGC > SRR4302533.632994/1‑94 (MQ=60)
TGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGC > SRR4302533.29305/1‑94 (MQ=60)
TGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGC > SRR4302533.6162064/1‑94 (MQ=60)
GCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCC < SRR4302533.1392939/94‑1 (MQ=60)
GCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCC > SRR4302533.5250314/1‑94 (MQ=60)
GCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCC > SRR4302533.5668669/1‑94 (MQ=60)
CTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCT < SRR4302533.5187393/94‑1 (MQ=60)
CATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCA < SRR4302533.4802492/94‑1 (MQ=60)
ATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAG < SRR4302533.400232/94‑1 (MQ=60)
TAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGG < SRR4302533.4189530/94‑1 (MQ=60)
TAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGG < SRR4302533.3492406/94‑1 (MQ=60)
AATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTT < SRR4302533.5723722/94‑1 (MQ=60)
AATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTT < SRR4302533.2430339/94‑1 (MQ=60)
ATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTG < SRR4302533.1440103/94‑1 (MQ=60)
ATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGAT < SRR4302533.5129684/94‑1 (MQ=60)
ATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGAT < SRR4302533.5536205/94‑1 (MQ=60)
ATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGAT < SRR4302533.2151056/94‑1 (MQ=60)
CGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAG < SRR4302533.2656518/94‑1 (MQ=60)
GAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGA > SRR4302533.26677/1‑94 (MQ=60)
GAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGA > SRR4302533.1181224/1‑94 (MQ=60)
GAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGA > SRR4302533.3223500/1‑94 (MQ=60)
ATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAA > SRR4302533.5473517/1‑94 (MQ=60)
TACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATA < SRR4302533.4212519/94‑1 (MQ=60)
TACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATA < SRR4302533.3820288/94‑1 (MQ=60)
TACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATA > SRR4302533.5151459/1‑94 (MQ=60)
ACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATAT < SRR4302533.6038665/94‑1 (MQ=60)
CAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATC > SRR4302533.4711777/1‑94 (MQ=60)
CAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATC < SRR4302533.6256319/94‑1 (MQ=60)
CAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATC < SRR4302533.998457/94‑1 (MQ=60)
CAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATC < SRR4302533.1120668/94‑1 (MQ=60)
GTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGC > SRR4302533.582778/1‑94 (MQ=60)
TGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCC < SRR4302533.528490/94‑1 (MQ=60)
GATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCT < SRR4302533.1436467/94‑1 (MQ=60)
ATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTG > SRR4302533.1393135/1‑94 (MQ=60)
ATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTG < SRR4302533.5039148/94‑1 (MQ=60)
ATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTG > SRR4302533.1879411/1‑94 (MQ=60)
ATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTG > SRR4302533.2676391/1‑94 (MQ=60)
TATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGG > SRR4302533.4353866/1‑94 (MQ=60)
ATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGG > SRR4302533.4002429/1‑94 (MQ=60)
ATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGG > SRR4302533.5712665/1‑94 (MQ=60)
TACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGG < SRR4302533.5977601/94‑1 (MQ=60)
CATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTT > SRR4302533.846300/1‑94 (MQ=60)
CTTGCCTCCCTGCAAAGAAGAGACTAACACTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCC < SRR4302533.5237078/94‑1 (MQ=60)
TTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCA > SRR4302533.5407816/1‑94 (MQ=60)
GCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATC < SRR4302533.2164647/94‑1 (MQ=60)
GCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATC < SRR4302533.2711164/94‑1 (MQ=60)
CCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCT < SRR4302533.2429601/94‑1 (MQ=60)
CCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCT < SRR4302533.3595741/94‑1 (MQ=60)
CTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTG < SRR4302533.1634189/94‑1 (MQ=60)
TCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGG > SRR4302533.3457377/1‑94 (MQ=60)
CCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGA < SRR4302533.4850705/94‑1 (MQ=60)
CCTGCAAAGAAGAGACTAACATTCGAATTTTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAA > SRR4302533.1019913/1‑94 (MQ=60)
CCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAA < SRR4302533.4931070/94‑1 (MQ=60)
CCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAA > SRR4302533.3362023/1‑94 (MQ=60)
AAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAA > SRR4302533.4387915/1‑94 (MQ=60)
AAGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAA > SRR4302533.4680863/1‑94 (MQ=60)
ATAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < SRR4302533.820741/94‑1 (MQ=60)
AGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAAT < SRR4302533.4600715/94‑1 (MQ=60)
AGAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTNNTCCATCTGGAACCNNGCGNAT > SRR4302533.6054693/1‑94 (MQ=60)
GAGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATG < SRR4302533.3179125/94‑1 (MQ=60)
AGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGC > SRR4302533.5893703/1‑94 (MQ=60)
AGACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGC > SRR4302533.3744017/1‑94 (MQ=60)
GACTAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCT > SRR4302533.5688126/1‑94 (MQ=60)
TAACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAA < SRR4302533.262464/94‑1 (MQ=60)
ACATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACG < SRR4302533.2320923/94‑1 (MQ=60)
CATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGC > SRR4302533.2516/1‑94 (MQ=60)
ATTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCC > SRR4302533.3627730/1‑94 (MQ=60)
TTCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCA < SRR4302533.4239647/94‑1 (MQ=60)
ATCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCA < SRR4302533.6257369/94‑1 (MQ=60)
TCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG < SRR4302533.5904795/94‑1 (MQ=60)
TCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG > SRR4302533.3634553/1‑94 (MQ=60)
TCGAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAG < SRR4302533.5032921/94‑1 (MQ=60)
GAATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGAC < SRR4302533.4975138/94‑1 (MQ=60)
AATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACA < SRR4302533.3190544/94‑1 (MQ=60)
AATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACA < SRR4302533.6260250/94‑1 (MQ=60)
ATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAG < SRR4302533.5933817/94‑1 (MQ=60)
ATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAG > SRR4302533.984717/1‑94 (MQ=60)
ATTGTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAG > SRR4302533.6335961/1‑94 (MQ=60)
GTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCT > SRR4302533.5770296/1‑94 (MQ=60)
GTTTGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCT > SRR4302533.4123247/1‑94 (MQ=60)
TGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAA > SRR4302533.685605/1‑94 (MQ=60)
TGGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAA < SRR4302533.116431/94‑1 (MQ=60)
GGGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAG < SRR4302533.4886588/94‑1 (MQ=60)
GGTTCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGC < SRR4302533.3835326/94‑1 (MQ=60)
TCGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACC < SRR4302533.2970054/94‑1 (MQ=60)
CGAGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCC < SRR4302533.3312964/94‑1 (MQ=60)
AGCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGA < SRR4302533.6165207/94‑1 (MQ=60)
GCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC < SRR4302533.3759330/94‑1 (MQ=60)
GCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC < SRR4302533.3798794/94‑1 (MQ=60)
GCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC < SRR4302533.3636636/94‑1 (MQ=60)
GCGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC < SRR4302533.4368484/94‑1 (MQ=60)
|
TGCTGCTCATAAATATCGAATTACAGTGATATACACATGTCTTGCCTCCCTGCAAAGAAGAGACTAACATTCGAATTGTTTGGGTTCGAACGCTGGCCTCAGGTTGATAGAAATATCGCCTGGGGCTTTTGTCCATCTGGAACCTCGCGAATGCTTAACGCCAGACAGCCTCAAGCACCCGAC > NC_000913/2885299‑2885481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
