Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,885,561 |
(C)5→4 |
intergenic (‑319/+40) |
ygcB ← / ← cysH |
hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,885,557 | 0 | C | . | 100.0%
| 752.1
/ NA
| 163 | intergenic (‑315/+44) | ygcB/cysH | hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (84/79); total (84/79) |
Only 100 of 175 total aligned reads displayed.
AGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG > NC_000913/2885465‑2885645
|
aGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGc > 1:5099052/1‑93 (MQ=255)
gCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcc < 2:578517/93‑1 (MQ=255)
gCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcc > 1:4147263/1‑93 (MQ=255)
ccTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccc > 1:2271698/1‑93 (MQ=255)
cTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGcccc < 2:26501/93‑1 (MQ=255)
cAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGccccat < 2:1384804/93‑3 (MQ=255)
cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc < 2:1515353/93‑1 (MQ=255)
cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc < 1:6154315/93‑1 (MQ=255)
cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc > 2:6200870/1‑93 (MQ=255)
cccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTc < 1:1230157/93‑1 (MQ=255)
ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCt < 2:4652668/93‑1 (MQ=255)
ccGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCAATCATTTCt > 1:5837877/1‑93 (MQ=255)
cGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTg < 2:5197982/93‑1 (MQ=255)
cGACGCCATTCTATAACTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTg > 2:271326/1‑93 (MQ=255)
aCGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGAc > 1:5915445/1‑93 (MQ=255)
gCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACag > 2:3800545/1‑93 (MQ=255)
ccATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACaga < 1:4898121/93‑1 (MQ=255)
ccATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACaga < 1:3137560/93‑1 (MQ=255)
ccATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACaga < 2:1917067/93‑1 (MQ=255)
cATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACagag < 1:3414790/93‑1 (MQ=255)
cATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACagag > 1:5980239/1‑93 (MQ=255)
aTTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAgg > 1:3848227/1‑93 (MQ=255)
ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc < 2:1724425/93‑1 (MQ=255)
ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc > 2:3987839/1‑93 (MQ=255)
ttCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGc > 2:4919962/1‑93 (MQ=255)
cTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGt < 2:3530323/93‑1 (MQ=255)
ataCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGttt < 1:663230/93‑1 (MQ=255)
aCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTaa < 2:1128635/93‑1 (MQ=255)
aCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTaa < 1:3625060/93‑1 (MQ=255)
aCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTaa > 1:4497245/1‑93 (MQ=255)
cTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAtt < 1:376803/93‑1 (MQ=255)
gATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTg < 2:2199350/93‑1 (MQ=255)
gATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTg < 2:4514766/93‑1 (MQ=255)
tAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTc > 1:3371594/1‑93 (MQ=255)
aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc < 1:692124/93‑1 (MQ=255)
aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc < 1:5261495/93‑1 (MQ=255)
aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc > 2:337272/1‑93 (MQ=255)
aaTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTcc < 1:4228934/93‑1 (MQ=255)
aTTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCg < 2:5653954/93‑1 (MQ=255)
tcttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGc < 2:5641632/93‑1 (MQ=255)
cttcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCa > 2:5386768/1‑93 (MQ=255)
tcCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAat < 2:5218903/93‑1 (MQ=255)
cccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAata > 1:5162555/1‑93 (MQ=255)
cccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAata < 1:4710474/93‑1 (MQ=255)
ccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAatat < 2:3721178/93‑1 (MQ=255)
ccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAatat < 1:3825270/93‑1 (MQ=255)
ccGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAatat > 2:5058905/1‑93 (MQ=255)
cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt > 2:3399132/1‑93 (MQ=255)
cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt < 1:3892051/93‑1 (MQ=255)
cgcgGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAtt < 2:2709822/93‑1 (MQ=255)
gcggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAttt > 1:4553517/1‑93 (MQ=255)
cggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTa < 2:4260797/93‑1 (MQ=255)
cggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTa < 1:806567/93‑1 (MQ=255)
cggcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTa < 2:2590756/93‑1 (MQ=255)
gcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAcc < 2:6018225/93‑1 (MQ=255)
gcgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGAGTTTAATTTGTACGGCAATATTTAcc > 1:2556670/1‑93 (MQ=255)
cgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAccc < 1:5132730/93‑1 (MQ=255)
cgTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAccc < 1:2768906/93‑1 (MQ=255)
ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtt > 1:5268584/1‑93 (MQ=255)
ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtt > 2:5035596/1‑93 (MQ=255)
ttCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCtc > 1:71509/1‑92 (MQ=255)
tCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTc < 1:2707242/93‑1 (MQ=255)
tCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTc > 2:1608786/1‑93 (MQ=255)
cGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgtg < 2:4098301/93‑1 (MQ=255)
cGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCgtg > 1:1324829/1‑93 (MQ=255)
tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTa > 2:5696900/1‑93 (MQ=255)
tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTa < 2:4361588/93‑1 (MQ=255)
tttAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTa > 2:717282/1‑93 (MQ=255)
aaaaTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc > 1:1585690/1‑93 (MQ=255)
aaaaTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc > 2:5020442/1‑93 (MQ=255)
aaaaTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAAcc < 1:1215733/93‑1 (MQ=255)
aTCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCcac > 1:5758744/1‑93 (MQ=255)
tCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCcaca > 1:1482643/1‑93 (MQ=255)
cAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAt > 2:2457232/1‑93 (MQ=255)
aGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAtt > 1:2273922/1‑93 (MQ=255)
ggAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTc > 2:5947992/1‑93 (MQ=255)
ggAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTc > 1:5500011/1‑93 (MQ=255)
ggAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTc > 1:838592/1‑93 (MQ=255)
aaTGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTccc > 2:4553867/1‑93 (MQ=255)
tgctgcTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtt > 2:306224/1‑93 (MQ=255)
tgctgcTCGCAAAAGAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtt < 2:3935325/93‑1 (MQ=255)
tgctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCttttt < 1:3985311/93‑1 (MQ=255)
cgctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCtcttt < 2:841382/92‑1 (MQ=255)
ctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTaa > 1:3478724/1‑93 (MQ=255)
ctCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTaa < 1:6253971/93‑1 (MQ=255)
gCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGcc > 2:4131506/1‑93 (MQ=255)
cAAAATAAAAACG‑CCCCATCTTTTCTGTCAGAGGCGTTTAATTTGTCCGGCAATATTTATCCTTCGTGTAACCCACATTCCCTTTTTAAGCCa > 2:6302697/1‑93 (MQ=255)
cAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCa > 1:4579148/1‑93 (MQ=255)
cAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCa > 1:1897411/1‑93 (MQ=255)
aaaaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCaa > 1:1801549/1‑93 (MQ=255)
aaaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACACTTCGTGTAACCCACATTCCCTTTTTAAGCCaaa > 1:2335381/1‑93 (MQ=255)
aaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAg < 2:3605538/93‑1 (MQ=255)
aaTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAg > 2:91077/1‑93 (MQ=255)
aTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGa < 2:5901971/93‑1 (MQ=255)
aTAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGa < 1:4424664/93‑1 (MQ=255)
tAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaa < 1:1623143/93‑1 (MQ=255)
aaaaaCG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCATTATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaaa < 2:5099052/93‑1 (MQ=255)
aaaaaCG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGaaa < 2:3203780/93‑1 (MQ=255)
aaaaCG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAAc < 1:520131/93‑1 (MQ=255)
aaaCG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAAcg > 2:5507217/1‑93 (MQ=255)
|
AGCCTCAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG > NC_000913/2885465‑2885645
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTC > NC_000913/2885470‑2885654
|
CAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATC > SRR4302533.708159/1‑94 (MQ=60)
AAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCA < SRR4302533.5369832/94‑1 (MQ=60)
AGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCAT < SRR4302533.6013730/94‑1 (MQ=60)
CCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCT < SRR4302533.6191346/94‑1 (MQ=60)
CCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCT < SRR4302533.1237520/94‑1 (MQ=60)
CCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCAATCATTTCT > SRR4302533.5873174/1‑94 (MQ=60)
GACGCCATTCTATGCCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGAC < SRR4302533.3621448/94‑1 (MQ=60)
GACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGAC > SRR4302533.5951194/1‑94 (MQ=60)
CCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAG < SRR4302533.2370458/94‑1 (MQ=60)
CCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAG > SRR4302533.6016461/1‑94 (MQ=60)
CCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAG < SRR4302533.3156850/94‑1 (MQ=60)
CCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAG < SRR4302533.4927801/94‑1 (MQ=60)
CATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGG < SRR4302533.805826/94‑1 (MQ=60)
CATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGG < SRR4302533.3435889/94‑1 (MQ=60)
CATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGG < SRR4302533.1760950/94‑1 (MQ=60)
CATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGG > SRR4302533.3871727/1‑94 (MQ=60)
ATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTA < SRR4302533.4849791/94‑1 (MQ=60)
ATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTA < SRR4302533.667146/94‑1 (MQ=60)
TACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAA > SRR4302533.4524479/1‑94 (MQ=60)
ACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAT < SRR4302533.4559880/94‑1 (MQ=60)
ACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAT > SRR4302533.680602/1‑94 (MQ=60)
ACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAT > SRR4302533.1278939/1‑94 (MQ=60)
ACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAAT < SRR4302533.3647365/94‑1 (MQ=60)
CTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTT > SRR4302533.4021783/1‑94 (MQ=60)
CTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTT < SRR4302533.4509557/94‑1 (MQ=60)
CTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTT > SRR4302533.3848357/1‑94 (MQ=60)
CTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTT < SRR4302533.379076/94‑1 (MQ=60)
ATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTC > SRR4302533.3392413/1‑94 (MQ=60)
AATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCG < SRR4302533.696213/94‑1 (MQ=60)
AATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCG < SRR4302533.5293083/94‑1 (MQ=60)
AATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCG < SRR4302533.4254502/94‑1 (MQ=60)
TCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATA > SRR4302533.5193724/1‑94 (MQ=60)
TCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATA < SRR4302533.5203525/94‑1 (MQ=60)
CCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATAT < SRR4302533.4739023/94‑1 (MQ=60)
CCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATT < SRR4302533.3848656/94‑1 (MQ=60)
CGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTT > SRR4302533.4581132/1‑94 (MQ=60)
CGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTT < SRR4302533.3915806/94‑1 (MQ=60)
CGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTAC < SRR4302533.811305/94‑1 (MQ=60)
GGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGAGTTTAATTTGTACGGCAATATTTACC > SRR4302533.2572393/1‑94 (MQ=60)
CGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCT < SRR4302533.2785898/94‑1 (MQ=60)
CGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCT < SRR4302533.4296484/94‑1 (MQ=60)
CGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCT < SRR4302533.5163737/94‑1 (MQ=60)
CGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCT < SRR4302533.3985157/94‑1 (MQ=60)
CGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCT > SRR4302533.3752865/1‑94 (MQ=60)
GTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTT > SRR4302533.5300187/1‑94 (MQ=60)
GTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTC > SRR4302533.71968/1‑94 (MQ=60)
TTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTC > SRR4302533.4702438/1‑94 (MQ=60)
TCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCG < SRR4302533.2723850/94‑1 (MQ=60)
CACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGT > SRR4302533.623731/1‑94 (MQ=60)
ACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTG > SRR4302533.1332777/1‑94 (MQ=60)
GTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACANAGGCGTTTAATTTGTCNGGCAATATTTACCNTNCNTNTA > SRR4302533.1215670/1‑94 (MQ=60)
TTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAA > SRR4302533.5062731/1‑94 (MQ=60)
TAAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACC > SRR4302533.1595244/1‑94 (MQ=60)
AAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCC < SRR4302533.1223036/94‑1 (MQ=60)
AAAATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCC > SRR4302533.2255454/1‑94 (MQ=60)
AATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCAC > SRR4302533.5793495/1‑94 (MQ=60)
ATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACA < SRR4302533.1437962/94‑1 (MQ=60)
ATCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACA > SRR4302533.1491593/1‑94 (MQ=60)
TCAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACAT < SRR4302533.2325989/94‑1 (MQ=60)
CAGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATT > SRR4302533.2287997/1‑94 (MQ=60)
AGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTC > SRR4302533.5533189/1‑94 (MQ=60)
AGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTC > SRR4302533.6052223/1‑94 (MQ=60)
AGGAATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTC > SRR4302533.843504/1‑94 (MQ=60)
AATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCT > SRR4302533.517942/1‑94 (MQ=60)
ATGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTT > SRR4302533.5748270/1‑94 (MQ=60)
TGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTT > SRR4302533.1870783/1‑94 (MQ=60)
TGCTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTT > SRR4302533.3053539/1‑94 (MQ=60)
CTGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTT > SRR4302533.5802599/1‑94 (MQ=60)
TGCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTA < SRR4302533.4009576/94‑1 (MQ=60)
GCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAA > SRR4302533.3908649/1‑94 (MQ=60)
GCTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAA > SRR4302533.3500188/1‑94 (MQ=60)
CTCGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAG < SRR4302533.6291376/94‑1 (MQ=60)
ACGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGC < SRR4302533.3427226/94‑1 (MQ=60)
CGCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCC > SRR4302533.3319488/1‑94 (MQ=60)
GCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCA > SRR4302533.4606902/1‑94 (MQ=60)
GCAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCA > SRR4302533.1908995/1‑94 (MQ=60)
CAAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAA > SRR4302533.1812512/1‑94 (MQ=60)
AAAATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACACTTCGTGTAACCCACATTCCCTTTTTAAGCCAAA > SRR4302533.2349836/1‑94 (MQ=60)
ATAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAA < SRR4302533.4451411/94‑1 (MQ=60)
TAAAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAA < SRR4302533.1632974/94‑1 (MQ=60)
AAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG > SRR4302533.5254901/1‑94 (MQ=60)
AAAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACG < SRR4302533.523219/94‑1 (MQ=60)
AAACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGC < SRR4302533.1542785/94‑1 (MQ=60)
AACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCG < SRR4302533.3121404/94‑1 (MQ=60)
AACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCG < SRR4302533.1276598/94‑1 (MQ=60)
ACG‑CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGT < SRR4302533.1744438/94‑1 (MQ=60)
cgCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTT > SRR4302533.3034923/3‑94 (MQ=60)
cgCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTT < SRR4302533.1288186/92‑1 (MQ=60)
GCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTT > SRR4302533.241569/1‑94 (MQ=60)
CCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTC > SRR4302533.3350885/1‑94 (MQ=60)
CCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCT > SRR4302533.2895179/1‑94 (MQ=60)
CCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCT > SRR4302533.3303305/1‑94 (MQ=60)
CCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCT > SRR4302533.696793/1‑94 (MQ=60)
CCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTT > SRR4302533.3050988/1‑94 (MQ=60)
CATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTC > SRR4302533.3519827/1‑94 (MQ=60)
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CAAGCACCCGACGCCATTCTATACCTGATAATTCTTCCCGCGGCGTTCACGTTTAAAATCAGGAATGCTGCTCGCAAAATAAAAACGCCCCCATCATTTCTGACAGAGGCGTTTAATTTGTCCGGCAATATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTC > NC_000913/2885470‑2885654
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
