Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,921,734 |
T→C |
S25G (AGC→GGC) |
yqcB ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,921,734 | 0 | T | C | 100.0%
| 612.3
/ NA
| 192 | S25G (AGC→GGC) | yqcB | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (91/101); total (91/101) |
Only 100 of 211 total aligned reads displayed.
GGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCTGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGC > NC_000913/2921644‑2921823
|
ggtcAAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGc < 1:4981778/93‑1 (MQ=255)
gtcCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCcgcg > 2:6173496/1‑93 (MQ=255)
tcCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCgg < 1:2997014/93‑1 (MQ=255)
cAGACGATGAGCGGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTg > 2:4238415/1‑93 (MQ=255)
cAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTg < 2:3965889/93‑1 (MQ=255)
aGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCCGCCCGCCGCGGTGa > 2:3136191/1‑93 (MQ=255)
gACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGaa > 2:1532652/1‑93 (MQ=255)
gACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGaa < 1:3343314/93‑1 (MQ=255)
gACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGaa < 1:4569575/93‑1 (MQ=255)
cGATGAGCAGTAAAACCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAcc < 2:2176673/93‑1 (MQ=255)
gaggAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAcca < 2:5172922/90‑1 (MQ=255)
gATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAcca < 2:4778878/93‑1 (MQ=255)
gATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAcca < 1:1776097/93‑1 (MQ=255)
tGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAccagc > 2:524582/1‑93 (MQ=255)
gAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAccagcc < 2:359052/93‑1 (MQ=255)
aGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAccagcca < 1:3258684/93‑1 (MQ=255)
gCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAccagccag < 2:5623750/93‑1 (MQ=255)
gCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAccagccag > 2:5889070/1‑93 (MQ=255)
cAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACcagccagc < 2:692676/93‑1 (MQ=255)
cAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACcagccagc > 2:3114918/1‑93 (MQ=255)
cAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACcagccagc < 2:5924288/93‑1 (MQ=255)
aGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCagccagcc > 1:3096629/1‑93 (MQ=255)
aGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCagccagcc > 2:5773686/1‑93 (MQ=255)
aGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCagccagcc < 1:3418911/93‑1 (MQ=255)
gTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCg > 2:550593/1‑93 (MQ=255)
gTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCg < 2:5604605/93‑1 (MQ=255)
tAAAAACATGCCGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCgg > 2:6299592/1‑93 (MQ=255)
aaaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGa < 2:110830/93‑1 (MQ=255)
aaaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGa > 2:4885215/1‑93 (MQ=255)
aaaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGGCGACCAGCCAGCCggg > 2:4412333/1‑92 (MQ=255)
aaaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCAAGCCACCCCCGGTGAACCAGCCAGCCggg > 2:846353/1‑92 (MQ=255)
aaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAg < 2:2442585/93‑1 (MQ=255)
aaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAg < 2:1310987/93‑1 (MQ=255)
aaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAg < 1:4691315/93‑1 (MQ=255)
aaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAg > 1:3839340/1‑93 (MQ=255)
aaaaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAg > 1:3866837/1‑93 (MQ=255)
aaCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAggg > 2:4185657/1‑93 (MQ=255)
aCATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGt < 2:3659742/93‑1 (MQ=255)
aTGCTGTCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGttt < 1:2705374/93‑1 (MQ=255)
aTGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGttt > 1:5462845/1‑93 (MQ=255)
aTGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGttt > 1:31756/1‑93 (MQ=255)
tGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGttta > 2:1870300/1‑93 (MQ=255)
tGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGttta < 1:6055085/93‑1 (MQ=255)
tGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGtttattt > 2:3200743/1‑93 (MQ=255)
ggCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGCCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGtttattta > 1:5797911/1‑93 (MQ=255)
ggCCTATCTGGTCACGCACGGTTTGCAGACCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGtttattta < 1:1925788/93‑1 (MQ=255)
tATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGc > 1:2898963/1‑93 (MQ=255)
tATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGc > 2:3905170/1‑93 (MQ=255)
aTCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCa > 2:5702635/1‑93 (MQ=255)
aTCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGCTTATTTACCGCa > 1:4000307/1‑93 (MQ=255)
tCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCaa > 2:4136111/1‑93 (MQ=255)
tCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCaa > 1:1341071/1‑93 (MQ=255)
tGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAAcc > 1:2867962/1‑93 (MQ=255)
ggTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCCGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCa > 2:2743840/1‑93 (MQ=255)
ggTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCa > 2:5463252/1‑93 (MQ=255)
acgcacgGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCa > 1:4341845/1‑93 (MQ=255)
gcacgGTTTGCATGACCACTCCTTTCTCGTCGCGATCCATCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCAtt < 1:5485938/93‑1 (MQ=255)
ccgGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTAAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCa < 1:354701/92‑1 (MQ=255)
acgGTTTGCATGACTACTACTTTCGCGTCACCAGCCAGCCAGCCGCGGTGAGCCAGCAAGCGGGAGGGTTTATTTACCGCAACCAGCCATTCa < 2:4052752/93‑1 (MQ=255)
acgGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCa > 2:4021361/1‑93 (MQ=255)
ggTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATc < 1:3646807/93‑1 (MQ=255)
ggTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATc < 2:4942804/93‑1 (MQ=255)
ggTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATc < 2:6093240/93‑1 (MQ=255)
cgTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATc < 2:6044270/92‑1 (MQ=255)
gTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATcc > 1:2215353/1‑93 (MQ=255)
gCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGAt < 1:3705654/93‑1 (MQ=255)
gCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGAt > 1:4651635/1‑93 (MQ=255)
cATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATa < 1:4747946/93‑1 (MQ=255)
cATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATa > 2:3356917/1‑93 (MQ=255)
cATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATa < 1:911518/93‑1 (MQ=255)
tGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATaga > 2:1671902/1‑93 (MQ=255)
gACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATagag < 1:5853129/93‑1 (MQ=255)
gACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATagag > 1:2719142/1‑93 (MQ=255)
aCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGt < 1:1687623/93‑1 (MQ=255)
aCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGt < 2:1035039/93‑1 (MQ=255)
cccctactTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTa < 2:5394343/90‑1 (MQ=255)
ccACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTa < 1:1756283/93‑1 (MQ=255)
cACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTAt > 2:648787/1‑93 (MQ=255)
ctactTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTAttt < 1:5168855/93‑1 (MQ=255)
ctactTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTAttt > 1:3455786/1‑93 (MQ=255)
tactTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTc > 1:684817/1‑93 (MQ=255)
tactTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTc < 2:5800118/93‑1 (MQ=255)
tactTTCTCGTCGCGACCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTc < 1:4464331/93‑1 (MQ=255)
tttCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAg < 1:5990348/93‑1 (MQ=255)
tttCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGGTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAg > 2:5327824/1‑93 (MQ=255)
ttCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGc < 1:4173182/93‑1 (MQ=255)
tcgtcgCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCAtt < 2:2277762/93‑1 (MQ=255)
gtcgCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAg < 2:12205/93‑1 (MQ=255)
tcgCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGGTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGc > 2:3325750/1‑93 (MQ=255)
cgcgATCCGTCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCt < 1:2376451/93‑1 (MQ=255)
gcgATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTc > 1:6189151/1‑93 (MQ=255)
gATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGc > 1:6146538/1‑93 (MQ=255)
aTCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGca < 1:2083043/93‑1 (MQ=255)
aTCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGca > 1:1517500/1‑93 (MQ=255)
tCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGcat < 2:5045924/93‑1 (MQ=255)
ccagccagCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGcatc < 1:1041220/93‑1 (MQ=255)
ccacccagCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGcatc < 2:1362716/93‑1 (MQ=255)
cagccagcCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCCTTCATCCTGATAGAGTATTTCCAGCATTAGCTCGcatca < 1:4551376/93‑1 (MQ=255)
cagccagcCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGcatca < 2:3659115/93‑1 (MQ=255)
ccagcCGGGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATcc < 2:3471654/93‑1 (MQ=255)
|
GGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCTGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGC > NC_000913/2921644‑2921823
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTCGGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCTGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGCA > NC_000913/2921641‑2921824
|
GTCGGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCT < SRR4302533.1563714/94‑1 (MQ=60)
GTCGGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCC < SRR4302533.2580758/94‑1 (MQ=60)
GGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCG < SRR4302533.4275499/94‑1 (MQ=60)
GGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCG > SRR4302533.3471390/1‑94 (MQ=60)
GGTCAAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCG < SRR4302533.5011979/94‑1 (MQ=60)
TCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGT < SRR4302533.4141968/94‑1 (MQ=60)
TCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGT < SRR4302533.3015340/94‑1 (MQ=60)
CCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTG > SRR4302533.3298009/1‑94 (MQ=60)
CAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGA > SRR4302533.4871427/1‑94 (MQ=60)
CAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGA > SRR4302533.3541441/1‑94 (MQ=60)
CAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGA > SRR4302533.2384136/1‑94 (MQ=60)
GACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAC < SRR4302533.3363975/94‑1 (MQ=60)
GACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAC > SRR4302533.6082056/1‑94 (MQ=60)
GACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAAC < SRR4302533.4597267/94‑1 (MQ=60)
CGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCA < SRR4302533.4236664/94‑1 (MQ=60)
CGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCA > SRR4302533.5328717/1‑94 (MQ=60)
CGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCA < SRR4302533.2658381/94‑1 (MQ=60)
GATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAG < SRR4302533.1786910/94‑1 (MQ=60)
AGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAG > SRR4302533.1776142/1‑94 (MQ=60)
AGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAG < SRR4302533.2724888/94‑1 (MQ=60)
AGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAG < SRR4302533.3278785/94‑1 (MQ=60)
CAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCC > SRR4302533.3115665/1‑94 (MQ=60)
AGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCG < SRR4302533.3440036/94‑1 (MQ=60)
AGTAAAAAAATGCTGCCCTCTCTGGTCACTCACGGTTTGCATGACCACTACTTCCTCGCCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCG < SRR4302533.6011051/94‑1 (MQ=60)
GTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGG < SRR4302533.4711389/94‑1 (MQ=60)
AAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAG > SRR4302533.3890440/1‑94 (MQ=60)
AAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAG > SRR4302533.3862794/1‑94 (MQ=60)
AAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGG < SRR4302533.4719750/94‑1 (MQ=60)
AAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGG < SRR4302533.5879698/94‑1 (MQ=60)
AAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGG < SRR4302533.5372153/94‑1 (MQ=60)
CATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTT > SRR4302533.5495757/1‑94 (MQ=60)
CATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTT > SRR4302533.3108335/1‑94 (MQ=60)
CATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTT > SRR4302533.31974/1‑94 (MQ=60)
ATGCTGTCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTA < SRR4302533.2721967/94‑1 (MQ=60)
ATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTA > SRR4302533.1856702/1‑94 (MQ=60)
TGCTGGCCTATCTGGTCACGCACGGTTTGCATGCCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTAT < SRR4302533.906497/94‑1 (MQ=60)
TGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTAT < SRR4302533.6091752/94‑1 (MQ=60)
TGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTAT > SRR4302533.3813333/1‑94 (MQ=60)
CTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTT < SRR4302533.5030333/94‑1 (MQ=60)
CTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTT < SRR4302533.3374803/94‑1 (MQ=60)
TGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGCCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTA > SRR4302533.5832938/1‑94 (MQ=60)
GGCCTATCTGGTCACGCACGGTTTGCAGACCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTAC < SRR4302533.1937536/94‑1 (MQ=60)
GGCCTATCTGGTCACGCACGGTTGGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTAC < SRR4302533.3899157/94‑1 (MQ=60)
GCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACC < SRR4302533.5902206/94‑1 (MQ=60)
GCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACC > SRR4302533.1742869/1‑94 (MQ=60)
CTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGC < SRR4302533.3374890/94‑1 (MQ=60)
CTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGC > SRR4302533.2916777/1‑94 (MQ=60)
TATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGCTTATTTACCGCA > SRR4302533.4024664/1‑94 (MQ=60)
ATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAA > SRR4302533.1349145/1‑94 (MQ=60)
TCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAAC > SRR4302533.2914371/1‑94 (MQ=60)
CTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACC > SRR4302533.2885606/1‑94 (MQ=60)
GGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAG > SRR4302533.3878358/1‑94 (MQ=60)
TCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCC > SRR4302533.3144352/1‑94 (MQ=60)
CACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCA > SRR4302533.4368009/1‑94 (MQ=60)
CACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCA > SRR4302533.4750567/1‑94 (MQ=60)
ACGCACGGTTTGCATGACCACTGCTTTCTCGTCGCGATCCAGGCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCAT < SRR4302533.2165177/94‑1 (MQ=60)
GCACGGTTTGCATGACCACTCCTTTCTCGTCGCGATCCATCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTC < SRR4302533.5519003/94‑1 (MQ=60)
CCGGTTTGCATGCCCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCAT < SRR4302533.708810/94‑1 (MQ=60)
CCGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTAAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCAT < SRR4302533.356862/94‑1 (MQ=60)
ACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCAT < SRR4302533.2398266/94‑1 (MQ=60)
ACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCAT > SRR4302533.4522987/1‑94 (MQ=60)
GGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCC < SRR4302533.3669228/94‑1 (MQ=60)
GGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCC > SRR4302533.5509093/1‑94 (MQ=60)
GGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCC > SRR4302533.2229027/1‑94 (MQ=60)
GGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCC > SRR4302533.1690286/1‑94 (MQ=60)
TGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGAT > SRR4302533.6204518/1‑94 (MQ=60)
TGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGAT > SRR4302533.668684/1‑94 (MQ=60)
TGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGAT > SRR4302533.4679821/1‑94 (MQ=60)
GCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATA < SRR4302533.3728417/94‑1 (MQ=60)
CATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAG < SRR4302533.93345/94‑1 (MQ=60)
CATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAG < SRR4302533.4776729/94‑1 (MQ=60)
CATGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAG < SRR4302533.916865/94‑1 (MQ=60)
TGACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAG > SRR4302533.2735831/1‑94 (MQ=60)
GACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGT < SRR4302533.5888517/94‑1 (MQ=60)
ACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTA < SRR4302533.1697850/94‑1 (MQ=60)
ACCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTA > SRR4302533.367441/1‑94 (MQ=60)
CCACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTAT < SRR4302533.1766982/94‑1 (MQ=60)
CACTCCTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATT < SRR4302533.3276760/94‑1 (MQ=60)
ACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTT > SRR4302533.3581682/1‑94 (MQ=60)
ACTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTT > SRR4302533.3477113/1‑94 (MQ=60)
CTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTC > SRR4302533.688868/1‑94 (MQ=60)
CTACTTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTC < SRR4302533.5200054/94‑1 (MQ=60)
TACTTTCTCGTCGCGACCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCC < SRR4302533.4491331/94‑1 (MQ=60)
TTTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGC < SRR4302533.6026633/94‑1 (MQ=60)
TTCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCA < SRR4302533.4198471/94‑1 (MQ=60)
TCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCAT < SRR4302533.2919835/94‑1 (MQ=60)
TCTCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCAT > SRR4302533.4621208/1‑94 (MQ=60)
TCGTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTA < SRR4302533.2752202/94‑1 (MQ=60)
GTCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGC < SRR4302533.4583139/94‑1 (MQ=60)
TCGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCT < SRR4302533.1203930/94‑1 (MQ=60)
CGCGATCCGTCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTC < SRR4302533.2391155/94‑1 (MQ=60)
CGCGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTC > SRR4302533.6226293/1‑94 (MQ=60)
CGATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGC > SRR4302533.6183543/1‑94 (MQ=60)
GATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCA > SRR4302533.6141574/1‑94 (MQ=60)
GATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCA < SRR4302533.4383889/94‑1 (MQ=60)
GATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCA > SRR4302533.1526634/1‑94 (MQ=60)
GATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCA > SRR4302533.1439307/1‑94 (MQ=60)
ATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCAT < SRR4302533.2095866/94‑1 (MQ=60)
ATCCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCAT > SRR4302533.562153/1‑94 (MQ=60)
CCAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCA < SRR4302533.1047343/94‑1 (MQ=60)
CAGCCAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCCTTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCAT < SRR4302533.4578975/94‑1 (MQ=60)
CAGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGC < SRR4302533.2035571/94‑1 (MQ=60)
AGCCGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGCA > SRR4302533.83979/1‑94 (MQ=60)
|
GTCGGTCCAGACGATGAGCAGTAAAAACATGCTGGCCTATCTGGTCACGCACGGTTTGCATGACCACTACTTTCTCGTCGCGATCCAGCCAGCTGCGGTGAACCAGCCAGCCGGAGGGTTTATTTACCGCAACCAGCCATTCATCCTGATAGAGTATTTCCAGCATTAGCTCGCATCATCCGCA > NC_000913/2921641‑2921824
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
