Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,956,101 |
A→G |
V269A (GTA→GCA) |
ptr ← |
protease III |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,956,101 | 0 | A | G | 100.0%
| 682.6
/ NA
| 211 | V269A (GTA→GCA) | ptr | protease III |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/122); total (89/122) |
Only 100 of 216 total aligned reads displayed.
TTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTACCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGT > NC_000913/2956011‑2956190
|
ttgttATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGcc < 1:5549341/93‑1 (MQ=255)
ttgttATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGcc < 2:1087404/93‑1 (MQ=255)
tgttATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCg < 1:204748/93‑1 (MQ=255)
ttATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGc > 1:4435514/1‑93 (MQ=255)
tATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCa < 1:3087257/93‑1 (MQ=255)
tATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCa > 1:1600029/1‑93 (MQ=255)
aTCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCAc < 2:2154073/93‑1 (MQ=255)
aTCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCAc > 1:2346225/1‑93 (MQ=255)
cGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACgg < 2:3260961/93‑1 (MQ=255)
gATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGt > 2:4835270/1‑93 (MQ=255)
gATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGt < 2:1188990/93‑1 (MQ=255)
gATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGt < 1:3975081/93‑1 (MQ=255)
cGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGAtt < 2:5907110/93‑1 (MQ=255)
gAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGAttt > 1:6018399/1‑93 (MQ=255)
gAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGAttt > 2:2665873/1‑93 (MQ=255)
aaaCTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTc > 2:1046353/1‑93 (MQ=255)
aaaCTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTc < 1:3891564/93‑1 (MQ=255)
aaCTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTcc > 2:2023048/1‑93 (MQ=255)
tCAACGCGCACCACTTTACGCGGCAGCGCAGGTACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGt < 2:267880/93‑1 (MQ=255)
tCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGt < 1:2138900/93‑1 (MQ=255)
cAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGtt < 1:3728202/93‑1 (MQ=255)
aaCGCGCAACACTTTACGCTGCAGCGCAGGGACGTAATGAATGATAATGCCTTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGttt < 2:1292659/93‑1 (MQ=255)
aaCGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGttt < 2:2214531/93‑1 (MQ=255)
aaCGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGttt > 1:5813754/1‑93 (MQ=255)
cgcgCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGttttt < 2:947117/93‑1 (MQ=255)
gcagcaCTTTCCGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGGCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGc < 2:2469191/93‑1 (MQ=255)
gcAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGc > 1:2694984/1‑93 (MQ=255)
gcAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGc > 2:37600/1‑93 (MQ=255)
gcAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGc < 1:5421429/93‑1 (MQ=255)
aaCACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctc > 2:1482681/1‑93 (MQ=255)
aaCACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctc < 1:4190974/93‑1 (MQ=255)
aaCACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctc < 1:5866360/93‑1 (MQ=255)
cacTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctctc < 2:1054184/93‑1 (MQ=255)
cacTTTACGCGGCAGCGCAGAGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctctc < 2:4156194/93‑1 (MQ=255)
acTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctctct > 2:2557039/1‑93 (MQ=255)
acTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGctctct > 1:559152/1‑93 (MQ=255)
acTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGATGCATTCCGGTTTTTTGctctat > 2:453842/1‑91 (MQ=255)
tttACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCttt < 1:2764620/93‑1 (MQ=255)
cgcgGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTc < 2:2925680/93‑1 (MQ=255)
cgcgGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTc < 2:66580/93‑1 (MQ=255)
cgcgGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTc < 1:1168175/93‑1 (MQ=255)
gcgGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCg < 1:2848914/93‑1 (MQ=255)
gCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCa < 1:1398732/93‑1 (MQ=255)
cAGCGCAGGGACGTAATGAATTATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCAc < 1:4536106/93‑1 (MQ=255)
aGCGCAGGGACGTAATGAATGATAATGACCTTTTGCGCGTCGGTGACTGGCGGCACGGAGATTTTCGGTTTTTTGCTCTCTTTGTTCGGCAcg > 1:3463830/1‑93 (MQ=255)
gcgcAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCAcgc < 1:5758182/93‑1 (MQ=255)
gggACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCa < 2:2618908/93‑1 (MQ=255)
gggACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCa > 1:640868/1‑93 (MQ=255)
ggACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCaa > 1:3812597/1‑93 (MQ=255)
gatgTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCaaa < 2:4747687/90‑1 (MQ=255)
gACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCaaa < 2:5428017/93‑1 (MQ=255)
gTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGgt > 2:4177073/1‑93 (MQ=255)
gTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCAGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGgt > 2:5604629/1‑93 (MQ=255)
tAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGgtg < 1:1731303/93‑1 (MQ=255)
tAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGgtg > 1:1824743/1‑93 (MQ=255)
aatgaatgATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGgtgt > 1:727788/1‑93 (MQ=255)
atgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTc < 1:4258017/93‑1 (MQ=255)
atgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTc < 2:2779562/93‑1 (MQ=255)
atgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTc < 2:1946857/93‑1 (MQ=255)
atgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTc < 2:4113007/93‑1 (MQ=255)
atgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTc < 2:6095387/93‑1 (MQ=255)
tgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTcc > 1:1982467/1‑93 (MQ=255)
tgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTcc < 1:2073249/93‑1 (MQ=255)
tgaatgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTcc < 1:6227517/93‑1 (MQ=255)
tgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTccgccg > 2:1001731/1‑93 (MQ=255)
tgaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTccgccg > 1:5170219/1‑93 (MQ=255)
gaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCcgccgc > 1:4052959/1‑93 (MQ=255)
gaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCcgccgc > 2:516401/1‑93 (MQ=255)
gaTAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCAGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCcgccgc > 2:4454057/1‑93 (MQ=255)
tAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCa < 2:1869890/93‑1 (MQ=255)
aaTGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAt < 1:2480060/93‑1 (MQ=255)
aaTGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAt < 1:2808884/93‑1 (MQ=255)
aaTGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAt < 1:3547414/93‑1 (MQ=255)
aTGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAtt < 2:4637133/93‑1 (MQ=255)
tGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAttt < 2:275832/93‑1 (MQ=255)
gCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCAtttt < 1:5107195/93‑1 (MQ=255)
ccTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTg > 2:3413017/1‑93 (MQ=255)
ccTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTg > 1:3006045/1‑93 (MQ=255)
cTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGc < 2:4623945/93‑1 (MQ=255)
ttttGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGcc > 2:5050110/1‑93 (MQ=255)
tttGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCa > 1:5694676/1‑93 (MQ=255)
tGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAAc < 2:3075884/93‑1 (MQ=255)
gcgcGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACt < 2:1757637/93‑1 (MQ=255)
gcgcGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACt < 1:818967/93‑1 (MQ=255)
cgcgTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTc < 2:3895825/93‑1 (MQ=255)
cgcgTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTc < 1:6246938/93‑1 (MQ=255)
cgcgGCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTc < 1:1040525/93‑1 (MQ=255)
gcgTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTcc < 2:1560907/93‑1 (MQ=255)
gcgTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTACCAACTcc < 2:6160941/93‑1 (MQ=255)
cgTCGGGGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCg > 1:2565259/1‑93 (MQ=255)
gTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCgg < 1:4306849/93‑1 (MQ=255)
gTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCgg > 1:4121974/1‑93 (MQ=255)
gTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCgg < 2:724754/93‑1 (MQ=255)
gTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCgg > 2:853045/1‑93 (MQ=255)
gTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCgg > 2:2971575/1‑93 (MQ=255)
tCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGc > 1:4686673/1‑93 (MQ=255)
tCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGCGTCCGCCGCCATTTTTGCCAACTCCGGc > 1:1523468/1‑93 (MQ=255)
gTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGc < 1:2705936/93‑1 (MQ=255)
gTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGc < 1:5075016/93‑1 (MQ=255)
aCTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGt < 2:6235435/93‑1 (MQ=255)
|
TTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTACCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGT > NC_000913/2956011‑2956190
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAGTTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTACCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTTA > NC_000913/2956008‑2956193
|
GAGTTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTG > SRR4302533.1229526/1‑94 (MQ=60)
GAGTTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTG > SRR4302533.1386827/1‑94 (MQ=60)
AGTTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGC > SRR4302533.4778757/1‑94 (MQ=60)
TTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCG < SRR4302533.5431475/94‑1 (MQ=60)
TTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCG < SRR4302533.5582852/94‑1 (MQ=60)
TTGTTAGCGATGCGAAACTCAACGCGCAACGCTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCG < SRR4302533.5582851/94‑1 (MQ=60)
TGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGG > SRR4302533.4470741/1‑94 (MQ=60)
TGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGG < SRR4302533.206050/94‑1 (MQ=60)
TGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGG > SRR4302533.3551784/1‑94 (MQ=60)
GTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGC > SRR4302533.4462327/1‑94 (MQ=60)
TTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCA > SRR4302533.1609713/1‑94 (MQ=60)
TATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCAC < SRR4302533.3106239/94‑1 (MQ=60)
TATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCAC > SRR4302533.2360746/1‑94 (MQ=60)
TATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCAC < SRR4302533.1001823/94‑1 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG < SRR4302533.4011572/94‑1 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG > SRR4302533.4970381/1‑94 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG < SRR4302533.4293205/94‑1 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG > SRR4302533.214597/1‑94 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG < SRR4302533.3999282/94‑1 (MQ=60)
GATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTG < SRR4302533.5432872/94‑1 (MQ=60)
TGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGAT < SRR4302533.2321506/94‑1 (MQ=60)
CGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTT > SRR4302533.6054869/1‑94 (MQ=60)
CGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTT < SRR4302533.1362300/94‑1 (MQ=60)
GAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTC > SRR4302533.5748402/1‑94 (MQ=60)
AAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCC < SRR4302533.3915311/94‑1 (MQ=60)
AACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCG > SRR4302533.1533217/1‑94 (MQ=60)
ACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGG < SRR4302533.287578/94‑1 (MQ=60)
TCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTT < SRR4302533.2152085/94‑1 (MQ=60)
CAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTT < SRR4302533.3751072/94‑1 (MQ=60)
CAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTT > SRR4302533.5848866/1‑94 (MQ=60)
AACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTT > SRR4302533.1782680/1‑94 (MQ=60)
AACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTT > SRR4302533.3976955/1‑94 (MQ=60)
ACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTT > SRR4302533.6060263/1‑94 (MQ=60)
GCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTG < SRR4302533.4439328/94‑1 (MQ=60)
CGCAACACTTTATGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGC > SRR4302533.256944/1‑94 (MQ=60)
CGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGC < SRR4302533.205678/94‑1 (MQ=60)
CGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGC > SRR4302533.2711499/1‑94 (MQ=60)
GCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCT < SRR4302533.5454052/94‑1 (MQ=60)
CAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTC < SRR4302533.2820011/94‑1 (MQ=60)
CAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTC > SRR4302533.725925/1‑94 (MQ=60)
AACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCT < SRR4302533.5901823/94‑1 (MQ=60)
AACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCT < SRR4302533.4216341/94‑1 (MQ=60)
AACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCT > SRR4302533.3680229/1‑94 (MQ=60)
CACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCT > SRR4302533.562474/1‑94 (MQ=60)
ACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTT > SRR4302533.3431301/1‑94 (MQ=60)
CTTTACGCGGCAGCGCAGGGCCGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCCCGGTGATTTCCGGTTTTTTGCTCTCTTT < SRR4302533.1132297/94‑1 (MQ=60)
CTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTT > SRR4302533.4647172/1‑94 (MQ=60)
TTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTG < SRR4302533.2781570/94‑1 (MQ=60)
TTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTG > SRR4302533.5198535/1‑94 (MQ=60)
TTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGT > SRR4302533.4214782/1‑94 (MQ=60)
cggggcaagggaggggcgttattAATGATAATGCCCTTTTGCGCGTCGGTGGCCTCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCG < SRR4302533.5103265/71‑1 (MQ=60)
CGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCG < SRR4302533.5664645/94‑1 (MQ=60)
CGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCG < SRR4302533.1175183/94‑1 (MQ=60)
CGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCG > SRR4302533.5835380/1‑94 (MQ=60)
CGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCG < SRR4302533.2061454/94‑1 (MQ=60)
GCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGG < SRR4302533.3078577/94‑1 (MQ=60)
GCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGG < SRR4302533.2866441/94‑1 (MQ=60)
GGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCA > SRR4302533.6277848/1‑94 (MQ=60)
GCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCAC < SRR4302533.1407162/94‑1 (MQ=60)
CAGCGCAGGGACGTAATGAATTATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACG < SRR4302533.4563571/94‑1 (MQ=60)
CAGCGCAGGGACGTAATGAATGATAATGACCTTTTGCGCGTCGGTGACTGGCGGCACGGAGATTTTCGGTTTTTTGCTCTCTTTGTTCGGCACG > SRR4302533.3485214/1‑94 (MQ=60)
AGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGC > SRR4302533.1923133/1‑94 (MQ=60)
GCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCG < SRR4302533.5792930/94‑1 (MQ=60)
AGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCA > SRR4302533.644636/1‑94 (MQ=60)
AGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCA > SRR4302533.5854300/1‑94 (MQ=60)
GGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAA > SRR4302533.3835914/1‑94 (MQ=60)
CGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGT < SRR4302533.755730/94‑1 (MQ=60)
CGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGT < SRR4302533.3894661/94‑1 (MQ=60)
GTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTG > SRR4302533.1835890/1‑94 (MQ=60)
TAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGT < SRR4302533.1741802/94‑1 (MQ=60)
TAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGT > SRR4302533.732087/1‑94 (MQ=60)
TAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGT < SRR4302533.2681210/94‑1 (MQ=60)
ATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCC > SRR4302533.4089274/1‑94 (MQ=60)
ATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCC > SRR4302533.1994601/1‑94 (MQ=60)
ATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCC < SRR4302533.2713095/94‑1 (MQ=60)
ATGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCC < SRR4302533.4283684/94‑1 (MQ=60)
TGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCG < SRR4302533.6264826/94‑1 (MQ=60)
TGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCG < SRR4302533.2498518/94‑1 (MQ=60)
TGAATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCG < SRR4302533.2086018/94‑1 (MQ=60)
AATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCC < SRR4302533.2986005/94‑1 (MQ=60)
ATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCG > SRR4302533.2745382/1‑94 (MQ=60)
ATGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCG > SRR4302533.5201423/1‑94 (MQ=60)
TGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGC > SRR4302533.4077640/1‑94 (MQ=60)
TGATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGC > SRR4302533.2440327/1‑94 (MQ=60)
GATAATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCC > SRR4302533.5617004/1‑94 (MQ=60)
ACTGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT > SRR4302533.5981461/1‑94 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT < SRR4302533.2495354/94‑1 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT > SRR4302533.4241539/1‑94 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT < SRR4302533.3819535/94‑1 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT < SRR4302533.3569279/94‑1 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT < SRR4302533.2826169/94‑1 (MQ=60)
AATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATT < SRR4302533.2826170/94‑1 (MQ=60)
ATGCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTT > SRR4302533.1491705/1‑94 (MQ=60)
GCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTT < SRR4302533.5138052/94‑1 (MQ=60)
GCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTT < SRR4302533.1101746/94‑1 (MQ=60)
GCCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTT > SRR4302533.5122877/1‑94 (MQ=60)
CCCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTG > SRR4302533.3024432/1‑94 (MQ=60)
CCTTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGC < SRR4302533.1733878/94‑1 (MQ=60)
TTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCA < SRR4302533.5853307/94‑1 (MQ=60)
TTTTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCA > SRR4302533.5729066/1‑94 (MQ=60)
TTGCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAAC < SRR4302533.4433499/94‑1 (MQ=60)
GCGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTC < SRR4302533.823766/94‑1 (MQ=60)
CGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCC < SRR4302533.739333/94‑1 (MQ=60)
CGCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCC < SRR4302533.6284323/94‑1 (MQ=60)
CGCGGCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCC < SRR4302533.1046643/94‑1 (MQ=60)
GCGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCG < SRR4302533.3877353/94‑1 (MQ=60)
GCGTCGGGGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCG > SRR4302533.2581046/1‑94 (MQ=60)
CGTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGG > SRR4302533.4146999/1‑94 (MQ=60)
GTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGC < SRR4302533.4332767/94‑1 (MQ=60)
GTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGC > SRR4302533.4715075/1‑94 (MQ=60)
GTCGGTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGCGTCCGCCGCCATTTTTGCCAACTCCGGC > SRR4302533.1532638/1‑94 (MQ=60)
CGGTGGCTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAG < SRR4302533.1918822/94‑1 (MQ=60)
GTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCG < SRR4302533.5105693/94‑1 (MQ=60)
GTGACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCG < SRR4302533.2722531/94‑1 (MQ=60)
GACTGCCGGCATGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCACTTTTGCCAACTCCGGCAGCGGT < SRR4302533.6289812/94‑1 (MQ=60)
ACTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTT > SRR4302533.4603545/1‑94 (MQ=60)
CTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTT > SRR4302533.6082687/1‑94 (MQ=60)
CTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTT > SRR4302533.3719467/1‑94 (MQ=60)
CTGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGCGTGCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTT > SRR4302533.4943156/1‑94 (MQ=60)
TGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTTT > SRR4302533.4387363/1‑94 (MQ=60)
TGCCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTTA < SRR4302533.4639854/94‑1 (MQ=60)
|
GAGTTGTTATCGATGCGAAACTCAACGCGCAACACTTTACGCGGCAGCGCAGGGACGTAATGAATGATAATGCCCTTTTGCGCGTCGGTGACTACCGGCACGGTGATTTCCGGTTTTTTGCTCTCTTTGTTCGGCACGCGACCAAAGGTGTCCGCCGCCATTTTTGCCAACTCCGGCAGCGGTTTA > NC_000913/2956008‑2956193
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
