Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1548 |
369.5 |
20095359 |
96.9% |
19472402 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGGTT > NC_000913/2956211‑2956397
|
CTTCATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTA > SRR4302540.2078923/1‑94 (MQ=60)
TTCATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGCGGTTAC > SRR4302540.6837726/1‑94 (MQ=60)
TTCATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTAC > SRR4302540.1707404/1‑94 (MQ=60)
CATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCA < SRR4302540.1665952/94‑1 (MQ=60)
CATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCA > SRR4302540.4843388/1‑94 (MQ=60)
CATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCA < SRR4302540.1665954/94‑1 (MQ=60)
ATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCAC > SRR4302540.177209/1‑94 (MQ=60)
ATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCAC > SRR4302540.7476379/1‑94 (MQ=60)
TCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACC < SRR4302540.3150619/94‑1 (MQ=60)
TCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACC < SRR4302540.4484554/94‑1 (MQ=60)
CAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCA < SRR4302540.7530038/94‑1 (MQ=60)
CAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCA > SRR4302540.7629701/1‑94 (MQ=60)
CAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCA > SRR4302540.4479323/1‑94 (MQ=60)
CAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCA < SRR4302540.1137391/94‑1 (MQ=60)
AAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAG > SRR4302540.7568202/1‑94 (MQ=60)
AAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAG > SRR4302540.5608055/1‑94 (MQ=60)
TTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAA < SRR4302540.5582865/94‑1 (MQ=60)
TGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAA < SRR4302540.6324265/94‑1 (MQ=60)
GGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTT > SRR4302540.7870231/1‑94 (MQ=60)
GGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTT > SRR4302540.7870232/1‑94 (MQ=60)
AATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGA < SRR4302540.2195034/94‑1 (MQ=60)
AATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGA < SRR4302540.7734829/94‑1 (MQ=60)
AATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGA < SRR4302540.5073211/94‑1 (MQ=60)
ATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAA > SRR4302540.9415572/1‑94 (MQ=60)
ATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAA < SRR4302540.6021342/94‑1 (MQ=60)
TAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAAC < SRR4302540.1811076/94‑1 (MQ=60)
AGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACC > SRR4302540.9173164/1‑94 (MQ=60)
AGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACC > SRR4302540.1444232/1‑94 (MQ=60)
AGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACC < SRR4302540.1001016/94‑1 (MQ=60)
tttCTTCTCGTGGAAATCTTTCAGCGCCTGCTGCCCCGGATTTCCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCG < SRR4302540.3148643/91‑1 (MQ=60)
GTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCG < SRR4302540.9742980/94‑1 (MQ=60)
GTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCG < SRR4302540.9742981/94‑1 (MQ=60)
GTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCG < SRR4302540.772862/94‑1 (MQ=60)
GTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCG > SRR4302540.6565764/1‑94 (MQ=60)
TACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGG > SRR4302540.7372256/1‑94 (MQ=60)
ACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGG > SRR4302540.1082759/1‑94 (MQ=60)
ACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGG < SRR4302540.6525627/94‑1 (MQ=60)
ACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGG > SRR4302540.7902454/1‑94 (MQ=60)
CTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGG < SRR4302540.3039159/94‑1 (MQ=60)
CTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGG > SRR4302540.7476026/1‑94 (MQ=60)
CTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGG < SRR4302540.8667744/94‑1 (MQ=60)
TTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGT < SRR4302540.2016011/94‑1 (MQ=60)
TCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTG < SRR4302540.9986837/94‑1 (MQ=60)
CTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGT > SRR4302540.9061537/1‑94 (MQ=60)
CTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGT < SRR4302540.8222171/94‑1 (MQ=60)
CTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGG > SRR4302540.4147059/1‑94 (MQ=60)
TCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTG > SRR4302540.9238182/1‑94 (MQ=60)
CGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGC > SRR4302540.6916462/1‑94 (MQ=60)
CGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGC > SRR4302540.1146951/1‑94 (MQ=60)
CGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGGGTGC > SRR4302540.2941130/1‑94 (MQ=60)
CGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGGTGCCACCAGAAAACTTTGAACCGGGGggggc > SRR4302540.1158683/1‑89 (MQ=60)
GTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCC > SRR4302540.962864/1‑94 (MQ=60)
GTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCC > SRR4302540.1767438/1‑94 (MQ=60)
GTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCC < SRR4302540.2800359/94‑1 (MQ=60)
TGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCG > SRR4302540.4947625/1‑94 (MQ=60)
GGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGG > SRR4302540.5747453/1‑94 (MQ=60)
GGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGG > SRR4302540.4017248/1‑94 (MQ=60)
AAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGT < SRR4302540.6555938/94‑1 (MQ=60)
ATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTGAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTA > SRR4302540.6579529/1‑94 (MQ=60)
ATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGCAAACTTTGAACCGGGGTGTGCCGGGTTA > SRR4302540.4273066/1‑94 (MQ=60)
ATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTA > SRR4302540.573439/1‑94 (MQ=60)
TCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAA < SRR4302540.2744808/94‑1 (MQ=60)
CTTTCAGCGCCTGCTGCACCGGATTACTAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAAT < SRR4302540.6526503/94‑1 (MQ=60)
CTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAAT < SRR4302540.6493524/94‑1 (MQ=60)
CTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAAT < SRR4302540.8122527/94‑1 (MQ=60)
TTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGG > SRR4302540.7025414/1‑94 (MQ=60)
TTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGG > SRR4302540.2409714/1‑94 (MQ=60)
TTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGG < SRR4302540.2170276/94‑1 (MQ=60)
TCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGT > SRR4302540.3322382/1‑94 (MQ=60)
TCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGT < SRR4302540.5218036/94‑1 (MQ=60)
CAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTT > SRR4302540.6111855/1‑94 (MQ=60)
CAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTT > SRR4302540.3083540/1‑94 (MQ=60)
AGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTT > SRR4302540.7536235/1‑94 (MQ=60)
AGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTT > SRR4302540.4441304/1‑94 (MQ=60)
AGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTCATGGTTT > SRR4302540.1504019/1‑94 (MQ=60)
GCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTC < SRR4302540.6963434/94‑1 (MQ=60)
GCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTC < SRR4302540.9214178/94‑1 (MQ=60)
CGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCT < SRR4302540.5344684/94‑1 (MQ=60)
CACCTGCTGCACCGTATTACCAAGTTTGTCGCTTAAAGTGTCGAAGTTACCACCAGAAAACTTTGACCCGGGGTGTGCCGGGTTAATGGTTTCT < SRR4302540.4836433/94‑1 (MQ=60)
GCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTG < SRR4302540.9311998/94‑1 (MQ=60)
GCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTG > SRR4302540.7645375/1‑94 (MQ=60)
GCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTG < SRR4302540.9018072/94‑1 (MQ=60)
CCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGC < SRR4302540.41295/94‑1 (MQ=60)
CCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGC > SRR4302540.5834427/1‑94 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG > SRR4302540.6290696/1‑94 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG > SRR4302540.4082785/1‑94 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG > SRR4302540.162302/1‑94 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG > SRR4302540.2979269/1‑94 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG < SRR4302540.9321438/94‑1 (MQ=60)
CTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCG < SRR4302540.8602124/94‑1 (MQ=60)
TGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGC > SRR4302540.4418974/1‑94 (MQ=60)
TGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGC > SRR4302540.4945305/1‑94 (MQ=60)
TGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGC > SRR4302540.7220980/1‑94 (MQ=60)
CTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTG > SRR4302540.2585886/1‑94 (MQ=60)
CTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGCTTTCTGCGCTG > SRR4302540.2585885/1‑94 (MQ=60)
CTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTG > SRR4302540.7629493/1‑94 (MQ=60)
GCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGAC < SRR4302540.9659913/94‑1 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC < SRR4302540.8330623/94‑1 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC < SRR4302540.8737742/94‑1 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC > SRR4302540.637048/1‑94 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC > SRR4302540.9394555/1‑94 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC > SRR4302540.1720447/1‑94 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACT > SRR4302540.2107535/1‑94 (MQ=60)
CACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACC > SRR4302540.7735660/1‑94 (MQ=60)
CCCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCT < SRR4302540.816184/94‑1 (MQ=60)
ACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCT > SRR4302540.9559457/1‑94 (MQ=60)
CCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTG > SRR4302540.584814/1‑94 (MQ=60)
CCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTG > SRR4302540.584813/1‑94 (MQ=60)
CCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTG < SRR4302540.988549/94‑1 (MQ=60)
CCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTG < SRR4302540.3294917/94‑1 (MQ=60)
CGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGT > SRR4302540.9234440/1‑94 (MQ=60)
CGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGT < SRR4302540.6541797/94‑1 (MQ=60)
GGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTG > SRR4302540.3528386/1‑94 (MQ=60)
GGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTG > SRR4302540.2362643/1‑94 (MQ=60)
GATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGC > SRR4302540.522065/1‑94 (MQ=60)
ATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCC > SRR4302540.7513927/1‑94 (MQ=60)
ACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATG > SRR4302540.2801860/1‑94 (MQ=60)
ACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATG > SRR4302540.5048726/1‑94 (MQ=60)
CCAGGTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGAGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGC > SRR4302540.3663479/1‑94 (MQ=60)
CCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGC < SRR4302540.4015630/94‑1 (MQ=60)
CAGGTTTGTCGCTTAAAGTTTCGAGGTTGTCACCAGAACACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCGGACCTGTccgcggcg > SRR4302540.1520929/1‑86 (MQ=60)
CAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCG > SRR4302540.5540696/1‑94 (MQ=60)
GTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCAT < SRR4302540.2002624/94‑1 (MQ=60)
GTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCAT > SRR4302540.3778434/1‑94 (MQ=60)
GTTTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCAT > SRR4302540.2677202/1‑94 (MQ=60)
GTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCAT < SRR4302540.1064395/94‑1 (MQ=60)
TTGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCC > SRR4302540.2474650/1‑94 (MQ=60)
TTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCC < SRR4302540.6034073/94‑1 (MQ=60)
TGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCC > SRR4302540.6701237/1‑94 (MQ=60)
TGTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCC < SRR4302540.3548027/94‑1 (MQ=60)
TGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCC > SRR4302540.9635389/1‑94 (MQ=60)
TGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCC > SRR4302540.974919/1‑94 (MQ=60)
GTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCG > SRR4302540.4322385/1‑94 (MQ=60)
GTCGCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCG > SRR4302540.4322384/1‑94 (MQ=60)
TCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTTTGCCATGCGCATCCCGT > SRR4302540.9072982/1‑94 (MQ=60)
TCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGT > SRR4302540.7124061/1‑94 (MQ=60)
GCTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCA > SRR4302540.5688880/1‑94 (MQ=60)
GCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCA < SRR4302540.4505035/94‑1 (MQ=60)
GCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCA < SRR4302540.2263163/94‑1 (MQ=60)
CTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCAC < SRR4302540.4518174/94‑1 (MQ=60)
CTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCAC < SRR4302540.5826688/94‑1 (MQ=60)
CTTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCAC < SRR4302540.3934239/94‑1 (MQ=60)
CTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCAC < SRR4302540.3001026/94‑1 (MQ=60)
CTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCAC > SRR4302540.1116586/1‑94 (MQ=60)
TTAAAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACG > SRR4302540.4060893/1‑94 (MQ=60)
TTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACG > SRR4302540.1682524/1‑94 (MQ=60)
TTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACG > SRR4302540.1682525/1‑94 (MQ=60)
TTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACG < SRR4302540.4767814/94‑1 (MQ=60)
TTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGCTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACG > SRR4302540.3565166/1‑94 (MQ=60)
AAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCG < SRR4302540.7451558/94‑1 (MQ=60)
AAGTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGT > SRR4302540.8164021/1‑94 (MQ=60)
GTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTAC < SRR4302540.3357022/94‑1 (MQ=60)
GTTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTAC < SRR4302540.8775338/94‑1 (MQ=60)
TTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACG < SRR4302540.8356335/94‑1 (MQ=60)
TTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACG < SRR4302540.4764962/94‑1 (MQ=60)
TTTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACG < SRR4302540.2448655/94‑1 (MQ=60)
TTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGC > SRR4302540.2872099/1‑94 (MQ=60)
TTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGC < SRR4302540.1516474/94‑1 (MQ=60)
TTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGC > SRR4302540.3745868/1‑94 (MQ=60)
TTCGAGGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGC > SRR4302540.2664770/1‑94 (MQ=60)
TCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCG < SRR4302540.6131117/94‑1 (MQ=60)
GAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCC < SRR4302540.3244057/94‑1 (MQ=60)
GAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCC > SRR4302540.6369391/1‑94 (MQ=60)
GAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCC < SRR4302540.9022852/94‑1 (MQ=60)
AGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCA > SRR4302540.6613141/1‑94 (MQ=60)
GGTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCAT < SRR4302540.8865109/94‑1 (MQ=60)
GGTTACCACCAGAAAACTTTGAACCGGGGTGTGCTGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCAT > SRR4302540.693626/1‑94 (MQ=60)
GGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCAT < SRR4302540.10116353/94‑1 (MQ=60)
GTTGCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATG > SRR4302540.3682973/1‑94 (MQ=60)
TTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGG < SRR4302540.3974831/94‑1 (MQ=60)
TACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGGT < SRR4302540.2130240/94‑1 (MQ=60)
TACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGGT < SRR4302540.7034010/94‑1 (MQ=60)
GCCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGGTT > SRR4302540.8744945/1‑94 (MQ=60)
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CTTCATCAAATTGGCGGAATAGTACTTCTCGTGGAAATCTTTCAGCGCCTGCTGCACCGGATTACCAGGTTTGTCGCTTAAAGTTTCGAGGTTACCACCAGAAAACTTTGAACCGGGGTGTGCCGGGTTAATGGTTTCTGCGCTGACCTGTGCCATGCGCATCCCGTCACGCGTACGCGCCATGGTT > NC_000913/2956211‑2956397
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
