Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,958,357	G→A	S698S (AGC→AGT)	recC ←	RecC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,958,357	0	G	A	99.1%	1151.2 / ‑5.8	327	S698S (AGC→AGT)	recC	RecC
Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (169/155); total (170/157)
Fisher's exact test for biased strand distribution p-value = 6.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 337 total aligned reads displayed.

ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA  >  NC_000913/2958267‑2958446

 taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtc                                                                                        >  1:9190996/1‑93 (MQ=255)

 taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGCCTACGGTCGCCACGCTTCGGTTTCTGACtc                                                                                        >  1:8649708/1‑93 (MQ=255)

 taGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAAAAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCCGTTTCTGACtc                                                                                        >  2:7149450/1‑93 (MQ=255)

   gagTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcat                                                                                      >  2:6301078/1‑93 (MQ=255)

   gagTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGATACGGTCGCCACGCTTCGGTTTCTGACtcat                                                                                      >  2:3665557/1‑93 (MQ=255)

     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    >  2:4940465/1‑93 (MQ=255)

     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    <  1:2285292/93‑1 (MQ=255)

     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    >  1:7931417/1‑93 (MQ=255)

     gTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACtcatca                                                                                    <  1:5903237/93‑1 (MQ=255)

         ttGCTGCGCGGAAAGTAACGCTTCCACGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTc                                                                                <  1:633238/93‑1 (MQ=255)

            ctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCaaa                                                                             <  2:9904454/93‑1 (MQ=255)

            ctgcGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCaaa                                                                             <  2:8370627/93‑1 (MQ=255)

                gcgGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGccc                                                                         >  1:6955189/1‑93 (MQ=255)

                  ggAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCaa                                                                       >  1:5835407/1‑93 (MQ=255)

                  ggAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCaa                                                                       <  2:5366101/93‑1 (MQ=255)

                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      <  1:3808942/93‑1 (MQ=255)

                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      <  1:6451638/93‑1 (MQ=255)

                   gAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAt                                                                      <  1:9313601/93‑1 (MQ=255)

                     aaTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATgg                                                                    >  2:1816834/1‑93 (MQ=255)

                     aaTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATgg                                                                    <  1:1420868/93‑1 (MQ=255)

                      aTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgc                                                                   >  1:4804270/1‑93 (MQ=255)

                      aTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgc                                                                   >  1:2492356/1‑93 (MQ=255)

                      aTTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgc                                                                   >  2:9397971/1‑93 (MQ=255)

                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  2:2678187/1‑93 (MQ=255)

                       ttAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGgcg                                                                  >  1:3220016/1‑93 (MQ=255)

                          aCGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCaa                                                               <  2:7795854/93‑1 (MQ=255)

                            gCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGc                                                             >  1:6644704/1‑93 (MQ=255)

                             cTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCt                                                            >  1:7232928/1‑93 (MQ=255)

                             cTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCt                                                            <  1:7375938/93‑1 (MQ=255)

                              ttCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTg                                                           <  2:9677604/93‑1 (MQ=255)

                              ttCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTg                                                           >  1:4632203/1‑93 (MQ=255)

                               tCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGa                                                          <  1:9841537/93‑1 (MQ=255)

                                ccAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAc                                                         >  1:4137620/1‑93 (MQ=255)

                                 cAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACg                                                        <  2:6488627/93‑1 (MQ=255)

                                 cAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACg                                                        >  1:4043639/1‑93 (MQ=255)

                                  aGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACgg                                                       >  1:2982845/1‑92 (MQ=255)

                                  aGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGt                                                       <  2:4278601/93‑1 (MQ=255)

                                  aGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGt                                                       <  2:4823414/93‑1 (MQ=255)

                                   ggAACAGATGGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg                                                      <  1:1941056/93‑1 (MQ=255)

                                   ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg                                                      <  2:4366826/93‑1 (MQ=255)

                                   ggAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTg                                                      >  2:7957865/1‑93 (MQ=255)

                                    gAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTgg                                                     >  1:5295651/1‑93 (MQ=255)

                                      aCAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAt                                                   >  2:1895874/1‑93 (MQ=255)

                                       cAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATa                                                  <  2:6037623/93‑1 (MQ=255)

                                         gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa                                                <  2:6940931/93‑1 (MQ=255)

                                         gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa                                                <  2:808675/93‑1 (MQ=255)

                                         gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa                                                <  2:8775413/93‑1 (MQ=255)

                                         gATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATaaa                                                <  2:5194756/93‑1 (MQ=255)

                                          aTAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCTGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAGGTGGATAAAc                                               <  1:8068208/93‑1 (MQ=255)

                                          aTAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTTTGACTCATCAGGTCACAGCCCAATGGCGCAAGATGACGTGGATAAAc                                               >  2:4137392/1‑93 (MQ=255)

                                           tAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACg                                              >  2:5255468/1‑93 (MQ=255)

                                           tAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACg                                              >  1:5464491/1‑93 (MQ=255)

                                           tAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACg                                              >  1:2718092/1‑93 (MQ=255)

                                            aGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGc                                             >  2:8707203/1‑93 (MQ=255)

                                            aGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGc                                             <  2:7988436/93‑1 (MQ=255)

                                             gCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGcc                                            >  1:4255978/1‑93 (MQ=255)

                                             gCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGcc                                            <  1:4403578/93‑1 (MQ=255)

                                              cGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcg                                           <  2:9218695/93‑1 (MQ=255)

                                               ggTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgt                                          >  1:4876800/1‑93 (MQ=255)

                                                gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc                                         <  2:4502004/93‑1 (MQ=255)

                                                gtcgtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAACCCCAATGGCGCAAGCTGACGTGGATAAACGCcgtc                                         <  2:3131501/93‑1 (MQ=255)

                                                   gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt                                      <  2:1204193/93‑1 (MQ=255)

                                                   gtcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGtt                                      >  2:2053379/1‑93 (MQ=255)

                                                    tcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTc                                     >  1:4854759/1‑93 (MQ=255)

                                                    tcATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTc                                     <  1:8215979/93‑1 (MQ=255)

                                                     cATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCa                                    <  1:8800585/93‑1 (MQ=255)

                                                     cATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCa                                    >  2:6521859/1‑93 (MQ=255)

                                                       tCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCCtt                                  >  2:2316422/1‑93 (MQ=255)

                                                       tCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAtt                                  >  1:7701257/1‑93 (MQ=255)

                                                       tCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAtt                                  <  1:8561938/93‑1 (MQ=255)

                                                       tCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAtt                                  >  2:9019525/1‑93 (MQ=255)

                                                        cgcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTc                                 >  2:3873430/1‑93 (MQ=255)

                                                         gcgACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTcc                                <  1:9428706/93‑1 (MQ=255)

                                                           gACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCca                              <  1:7099926/93‑1 (MQ=255)

                                                              ggCTACGGTCGCTACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcagca                           <  1:9387364/93‑1 (MQ=255)

                                                              ggCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCcagca                           <  1:7981219/93‑1 (MQ=255)

                                                                cTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAgg                         <  2:254049/93‑1 (MQ=255)

                                                                 tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGc                        <  1:7544887/93‑1 (MQ=255)

                                                                 tACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGc                        <  2:8446716/93‑1 (MQ=255)

                                                                   cGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCaa                      <  2:5921704/93‑1 (MQ=255)

                                                                      tCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAcc                   >  2:3027071/1‑93 (MQ=255)

                                                                       cGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCa                  <  1:7305381/93‑1 (MQ=255)

                                                                        gCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCAc                 <  1:3562746/93‑1 (MQ=255)

                                                                         ccACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACt                >  2:8293026/1‑93 (MQ=255)

                                                                           aCGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACttt              >  2:3406623/1‑93 (MQ=255)

                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  2:1303652/93‑1 (MQ=255)

                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             <  2:7318623/93‑1 (MQ=255)

                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             >  1:2063287/1‑93 (MQ=255)

                                                                            cGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTg             >  2:4224670/1‑93 (MQ=255)

                                                                              cTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGaa           <  2:5693947/93‑1 (MQ=255)

                                                                              cTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGaa           <  1:2581607/93‑1 (MQ=255)

                                                                               ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc          <  1:1165495/93‑1 (MQ=255)

                                                                               ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc          <  1:5633460/93‑1 (MQ=255)

                                                                               ttCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAc          >  1:1013617/1‑93 (MQ=255)

                                                                                tCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACg         >  2:1734148/1‑93 (MQ=255)

                                                                                tCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACg         >  2:2217251/1‑93 (MQ=255)

                                                                                  ggTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGa       <  1:3552542/93‑1 (MQ=255)

                                                                                   gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa      <  2:7484841/93‑1 (MQ=255)

                                                                                   gTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGaa      <  2:3611814/93‑1 (MQ=255)

                                                                                      tCTGACTCGTCACGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTg   <  1:5134700/93‑1 (MQ=255)

ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA  >  NC_000913/2958267‑2958446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG  >  NC_000913/2958264‑2958449

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA                                                                                              >  SRR4302540.7717270/1‑94 (MQ=60)

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA                                                                                              >  SRR4302540.9901502/1‑94 (MQ=60)

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA                                                                                              <  SRR4302540.1578971/94‑1 (MQ=60)

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGA                                                                                              >  SRR4302540.9265221/1‑94 (MQ=60)

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTCTCTGC                                                                                              >  SRR4302540.4345252/1‑94 (MQ=60)

 ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGAC                                                                                             >  SRR4302540.9439349/1‑94 (MQ=60)

 ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGAC                                                                                             >  SRR4302540.9376961/1‑94 (MQ=60)

 ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGAC                                                                                             >  SRR4302540.8001722/1‑94 (MQ=60)

 ATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGAC                                                                                             >  SRR4302540.7761275/1‑94 (MQ=60)

  TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT                                                                                            <  SRR4302540.6779912/94‑1 (MQ=60)

  TATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACT                                                                                            >  SRR4302540.4624226/1‑94 (MQ=60)

   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                           >  SRR4302540.9301225/1‑94 (MQ=60)

   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                           >  SRR4302540.2923686/1‑94 (MQ=60)

   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                           >  SRR4302540.2564133/1‑94 (MQ=60)

   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                           >  SRR4302540.1970304/1‑94 (MQ=60)

   ATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGCCTACGGTCGCCACGCTTCGGTTTCTGACTC                                                                                           >  SRR4302540.8750187/1‑94 (MQ=60)

       AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                       >  SRR4302540.8023864/1‑94 (MQ=60)

       AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                       >  SRR4302540.4895810/1‑94 (MQ=60)

       AGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCA                                                                                       >  SRR4302540.9518657/1‑94 (MQ=60)

        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                      >  SRR4302540.7549220/1‑94 (MQ=60)

        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                      <  SRR4302540.2309864/94‑1 (MQ=60)

        GTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAG                                                                                      <  SRR4302540.5968423/94‑1 (MQ=60)

         TTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGG                                                                                     <  SRR4302540.3847367/94‑1 (MQ=60)

          TTTTGCTGCGCGGAAATTGACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGT                                                                                    <  SRR4302540.4694479/94‑1 (MQ=60)

           TTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTC                                                                                   <  SRR4302540.2653/94‑1 (MQ=60)

            TTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCA                                                                                  >  SRR4302540.4865868/1‑94 (MQ=60)

            TTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCA                                                                                  >  SRR4302540.503579/1‑94 (MQ=60)

            TTGCTGCGCGGAAAGTAACGCTTCCACGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCA                                                                                  <  SRR4302540.639969/94‑1 (MQ=60)

             TGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAA                                                                                 >  SRR4302540.9470748/1‑94 (MQ=60)

               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                               >  SRR4302540.4308094/1‑94 (MQ=60)

               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                               >  SRR4302540.8266800/1‑94 (MQ=60)

               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAG                                                                               >  SRR4302540.8787010/1‑94 (MQ=60)

               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAC                                                                               >  SRR4302540.7675396/1‑94 (MQ=60)

               CTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGGCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGgcctac                                                                               >  SRR4302540.7939377/1‑88 (MQ=60)

                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGC                                                                              >  SRR4302540.2179917/1‑94 (MQ=60)

                TGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGC                                                                              >  SRR4302540.7856435/1‑94 (MQ=60)

                  CGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCC                                                                            >  SRR4302540.7032573/1‑94 (MQ=60)

                   GCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCA                                                                           <  SRR4302540.8004706/94‑1 (MQ=60)

                    CGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAA                                                                          >  SRR4302540.5899928/1‑94 (MQ=60)

                      GAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATG                                                                        <  SRR4302540.9424765/94‑1 (MQ=60)

                      GAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATG                                                                        <  SRR4302540.9344664/94‑1 (MQ=60)

                      GAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATG                                                                        <  SRR4302540.6523446/94‑1 (MQ=60)

                      GAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATG                                                                        <  SRR4302540.3850425/94‑1 (MQ=60)

                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                       <  SRR4302540.2379001/94‑1 (MQ=60)

                       AAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGG                                                                       <  SRR4302540.423138/94‑1 (MQ=60)

                        AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAACGCCCAATGGG                                                                      >  SRR4302540.4855684/1‑94 (MQ=60)

                        AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC                                                                      <  SRR4302540.1436231/94‑1 (MQ=60)

                        AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC                                                                      >  SRR4302540.4855689/1‑94 (MQ=60)

                        AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC                                                                      >  SRR4302540.2519204/1‑94 (MQ=60)

                        AATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGC                                                                      >  SRR4302540.8054667/1‑94 (MQ=60)

                         ATTAACGCTTCCAGGAACAGATAGCTGTCGTCATCGCGACGGCTACGGTAGCCACGCTTGGGTTTCTGACTCATCAGGTCAAAGCACAATGGCG                                                                     >  SRR4302540.5639705/1‑94 (MQ=60)

                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                     <  SRR4302540.322646/94‑1 (MQ=60)

                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                     >  SRR4302540.6178832/1‑94 (MQ=60)

                         ATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCG                                                                     >  SRR4302540.3255002/1‑94 (MQ=60)

                          TTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGC                                                                    <  SRR4302540.7346698/94‑1 (MQ=60)

                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA                                                                   >  SRR4302540.3823993/1‑94 (MQ=60)

                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA                                                                   <  SRR4302540.975155/94‑1 (MQ=60)

                           TAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCA                                                                   >  SRR4302540.5874252/1‑94 (MQ=60)

                            AACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAA                                                                  <  SRR4302540.3494465/94‑1 (MQ=60)

                             ACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAG                                                                 <  SRR4302540.3179161/94‑1 (MQ=60)

                              CGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGC                                                                >  SRR4302540.6718221/1‑94 (MQ=60)

                              CGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGC                                                                >  SRR4302540.1561178/1‑94 (MQ=60)

                               GCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCT                                                               >  SRR4302540.7313597/1‑94 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCACTGGCGCAAGCTG                                                              >  SRR4302540.1092731/1‑94 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              >  SRR4302540.8337574/1‑94 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              <  SRR4302540.4322312/94‑1 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              <  SRR4302540.5327592/94‑1 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              <  SRR4302540.7458140/94‑1 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              >  SRR4302540.4681812/1‑94 (MQ=60)

                                CTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTG                                                              >  SRR4302540.7245291/1‑94 (MQ=60)

                                 TTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGA                                                             >  SRR4302540.1746972/1‑94 (MQ=60)

                                 TTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGA                                                             <  SRR4302540.4728741/94‑1 (MQ=60)

                                 TTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGA                                                             >  SRR4302540.5607865/1‑94 (MQ=60)

                                  TCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAC                                                            <  SRR4302540.9956591/94‑1 (MQ=60)

                                  TCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAC                                                            >  SRR4302540.4182389/1‑94 (MQ=60)

                                   CCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACG                                                           >  SRR4302540.4087234/1‑94 (MQ=60)

                                    CAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGG                                                          >  SRR4302540.3015768/1‑94 (MQ=60)

                                    CAGAAGCAGATAGCAGTCGTCATCGCGACGGCTACGGAAGCCACGCTACGGTTTCTGACTCATCAGGACAAAACCCAATGGAGCAAGCTGACGT                                                          <  SRR4302540.9038662/94‑1 (MQ=50)

                                      GGAACAGATGGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG                                                        <  SRR4302540.1962191/94‑1 (MQ=60)

                                      GGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG                                                        >  SRR4302540.3597133/1‑94 (MQ=60)

                                      GGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG                                                        >  SRR4302540.3950749/1‑94 (MQ=60)

                                      GGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGG                                                        >  SRR4302540.5353572/1‑94 (MQ=60)

                                      GGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTCACGGGG                                                        >  SRR4302540.5233353/1‑94 (MQ=60)

                                       GAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGA                                                       <  SRR4302540.7318473/94‑1 (MQ=60)

                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGAT                                                      >  SRR4302540.9313792/1‑94 (MQ=60)

                                        AACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAAGGGCGCAAGCTGACGTGGAT                                                      <  SRR4302540.4646302/94‑1 (MQ=60)

                                          CAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAA                                                    <  SRR4302540.7441542/94‑1 (MQ=60)

                                          CAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAA                                                    <  SRR4302540.5944922/94‑1 (MQ=60)

                                           AGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAA                                                   >  SRR4302540.9521050/1‑94 (MQ=60)

                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCTGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGAGGTGGATAAACG                                                 <  SRR4302540.8161825/94‑1 (MQ=60)

                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                 >  SRR4302540.2747398/1‑94 (MQ=60)

                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                 >  SRR4302540.5524636/1‑94 (MQ=60)

                                             ATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACG                                                 >  SRR4302540.7579091/1‑94 (MQ=60)

                                              TAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGC                                                >  SRR4302540.1969505/1‑94 (MQ=60)

                                              TAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGC                                                <  SRR4302540.6206170/94‑1 (MQ=60)

                                               AGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCC                                               >  SRR4302540.4302281/1‑94 (MQ=60)

                                               AGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCC                                               <  SRR4302540.4241442/94‑1 (MQ=60)

                                               AGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCC                                               >  SRR4302540.5182157/1‑94 (MQ=60)

                                                GCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCTTCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCG                                              <  SRR4302540.2106061/94‑1 (MQ=60)

                                                GCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCG                                              <  SRR4302540.4451328/94‑1 (MQ=60)

                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                             <  SRR4302540.4385582/94‑1 (MQ=60)

                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                             >  SRR4302540.4929147/1‑94 (MQ=60)

                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGT                                             >  SRR4302540.1226541/1‑94 (MQ=60)

                                                 CGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGC                                             >  SRR4302540.7535596/1‑94 (MQ=60)

                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC                                            <  SRR4302540.861359/94‑1 (MQ=60)

                                                  GGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTC                                            >  SRR4302540.7955468/1‑94 (MQ=60)

                                                   GTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCG                                           >  SRR4302540.4922555/1‑94 (MQ=60)

                                                    TCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGT                                          <  SRR4302540.539874/94‑1 (MQ=60)

                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                         <  SRR4302540.4019101/94‑1 (MQ=60)

                                                     CGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTT                                         <  SRR4302540.7117364/94‑1 (MQ=60)

                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                        >  SRR4302540.4906799/1‑94 (MQ=60)

                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                        >  SRR4302540.8794386/1‑94 (MQ=60)

                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                        >  SRR4302540.1205600/1‑94 (MQ=60)

                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                        >  SRR4302540.2925573/1‑94 (MQ=60)

                                                      GTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTC                                        >  SRR4302540.4906800/1‑94 (MQ=60)

                                                       TCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCA                                       >  SRR4302540.8255557/1‑94 (MQ=60)

                                                       TCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCA                                       <  SRR4302540.8311472/94‑1 (MQ=60)

                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                      <  SRR4302540.3367962/94‑1 (MQ=60)

                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                      >  SRR4302540.5466212/1‑94 (MQ=60)

                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                      <  SRR4302540.8281744/94‑1 (MQ=60)

                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                      <  SRR4302540.8902332/94‑1 (MQ=60)

                                                        CATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCAT                                      >  SRR4302540.2628552/1‑94 (MQ=60)

                                                         ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                     >  SRR4302540.8089158/1‑94 (MQ=60)

                                                         ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                     >  SRR4302540.919627/1‑94 (MQ=60)

                                                         ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                     >  SRR4302540.7789258/1‑94 (MQ=60)

                                                         ATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                     <  SRR4302540.8701718/94‑1 (MQ=60)

                                                         ATCGCGACGCCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATT                                     <  SRR4302540.9566553/94‑1 (MQ=60)

                                                          TCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTC                                    <  SRR4302540.7436993/94‑1 (MQ=60)

                                                          TCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTC                                    <  SRR4302540.8661376/94‑1 (MQ=60)

                                                           CGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCC                                   >  SRR4302540.6606472/1‑94 (MQ=60)

                                                           CGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCC                                   >  SRR4302540.5564219/1‑94 (MQ=60)

                                                            GCGACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCC                                  <  SRR4302540.9540723/94‑1 (MQ=60)

                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                <  SRR4302540.5803885/94‑1 (MQ=60)

                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                >  SRR4302540.4018936/1‑94 (MQ=60)

                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                >  SRR4302540.10048103/1‑94 (MQ=60)

                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                <  SRR4302540.7178928/94‑1 (MQ=60)

                                                              GACGGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAG                                >  SRR4302540.1067108/1‑94 (MQ=60)

                                                                 GGCTACGGTCGCTACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                             <  SRR4302540.9499093/94‑1 (MQ=60)

                                                                 GGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                             <  SRR4302540.8042055/94‑1 (MQ=60)

                                                                 GGCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAG                             <  SRR4302540.8074176/94‑1 (MQ=60)

                                                                  GCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAAGGCCGTCGTTCATTCCCAGCAGG                            <  SRR4302540.2987206/94‑1 (MQ=60)

                                                                  GCTACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGG                            <  SRR4302540.6730625/94‑1 (MQ=60)

                                                                    TACGGTCGCCACGCTTCGGTTTCTGCCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCA                          <  SRR4302540.5930362/94‑1 (MQ=60)

                                                                    TACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCA                          <  SRR4302540.7629440/94‑1 (MQ=60)

                                                                    TACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCA                          <  SRR4302540.6446840/94‑1 (MQ=60)

                                                                     ACGGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAA                         >  SRR4302540.6962728/1‑94 (MQ=60)

                                                                       GGTCGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAAC                       >  SRR4302540.2470634/1‑94 (MQ=60)

                                                                          CGCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCAC                    <  SRR4302540.7386932/94‑1 (MQ=60)

                                                                           GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAACCCACT                   >  SRR4302540.8726602/1‑94 (MQ=60)

                                                                           GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACT                   <  SRR4302540.7711939/94‑1 (MQ=60)

                                                                           GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACT                   <  SRR4302540.3601663/94‑1 (MQ=60)

                                                                           GCCACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACT                   <  SRR4302540.3601664/94‑1 (MQ=60)

                                                                             CACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTT                 >  SRR4302540.245742/1‑94 (MQ=60)

                                                                             CACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTT                 <  SRR4302540.7289942/94‑1 (MQ=60)

                                                                              ACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTG                >  SRR4302540.2085487/1‑94 (MQ=60)

                                                                              ACGCTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTG                >  SRR4302540.5043354/1‑94 (MQ=60)

                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC             <  SRR4302540.2609434/94‑1 (MQ=60)

                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC             <  SRR4302540.2609437/94‑1 (MQ=60)

                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC             >  SRR4302540.1023892/1‑94 (MQ=60)

                                                                                 CTTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAAC             <  SRR4302540.657014/94‑1 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGTCAAACCACTTTGAACG            >  SRR4302540.9085633/1‑94 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            <  SRR4302540.4122446/94‑1 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            <  SRR4302540.5695462/94‑1 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            >  SRR4302540.711788/1‑94 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            <  SRR4302540.1177585/94‑1 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            <  SRR4302540.1929254/94‑1 (MQ=60)

                                                                                  TTCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACG            >  SRR4302540.9472907/1‑94 (MQ=60)

                                                                                   TCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGG           <  SRR4302540.9308362/94‑1 (MQ=60)

                                                                                   TCGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGG           <  SRR4302540.6678985/94‑1 (MQ=60)

                                                                                    CGGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGA          >  SRR4302540.4139150/1‑94 (MQ=60)

                                                                                     GGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAA         >  SRR4302540.728240/1‑94 (MQ=60)

                                                                                     GGTTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAA         <  SRR4302540.3591357/94‑1 (MQ=60)

                                                                                      GTTTCTGACTCATCAGGGCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAAT        <  SRR4302540.3422133/94‑1 (MQ=60)

                                                                                       TTTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATT       <  SRR4302540.9774875/94‑1 (MQ=60)

                                                                                        TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG      >  SRR4302540.8873432/1‑94 (MQ=60)

                                                                                        TTCTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTG      <  SRR4302540.814884/94‑1 (MQ=60)

                                                                                         TCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA     <  SRR4302540.6228818/94‑1 (MQ=60)

                                                                                         TCTGACTCGTCACGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGA     <  SRR4302540.5190309/94‑1 (MQ=60)

                                                                                          CTGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAA    <  SRR4302540.6496660/94‑1 (MQ=60)

                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC   <  SRR4302540.2329648/94‑1 (MQ=60)

                                                                                           TGACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAAC   <  SRR4302540.8456009/94‑1 (MQ=60)

                                                                                            GACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG  <  SRR4302540.1419177/94‑1 (MQ=60)

                                                                                            GACTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG  <  SRR4302540.1419176/94‑1 (MQ=60)

                                                                                            GACTCATCAGGTCAAAGCCCAAGGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG  <  SRR4302540.272676/94‑1 (MQ=60)

GATATAGAGTTTTTGCTGCGCGGAAATTAACGCTTCCAGGAACAGATAGCGGTCGTCATCGCGACGGCTACGGTCGCCACGCTTCGGTTTCTGGCTCATCAGGTCAAAGCCCAATGGCGCAAGCTGACGTGGATAAACGCCGTCGTTCATTCCCAGCAGGCAAACCACTTTGAACGGAATTGAACG  >  NC_000913/2958264‑2958449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`