Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,965,001	T→C	M486V (ATG→GTG)	ptsP ←	PtsP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,965,001	0	T	C	100.0%	1107.6 / NA	343	M486V (ATG→GTG)	ptsP	PtsP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (194/149); total (194/149)

Only 100 of 361 total aligned reads displayed.

CTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT  >  NC_000913/2964911‑2965090

ctTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATcc                                                                                         >  1:2158918/1‑93 (MQ=255)

 ttCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCAcccc                                                                                        <  1:8199143/93‑1 (MQ=255)

  tCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACcccc                                                                                       <  1:3453205/93‑1 (MQ=255)

   cGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCt                                                                                      <  1:9797975/93‑1 (MQ=255)

     cTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGa                                                                                    <  1:8378802/93‑1 (MQ=255)

      tGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGGTTATCATTGAACATTTGCAGCACCCCCTGAt                                                                                   >  1:293321/1‑93 (MQ=255)

       gATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATa                                                                                  <  2:8808691/93‑1 (MQ=255)

       gATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATa                                                                                  <  1:1018570/93‑1 (MQ=255)

         tCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGAAGCACCCCCTGATACt                                                                                >  1:8505129/1‑93 (MQ=255)

          cGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTg                                                                               <  2:401469/93‑1 (MQ=255)

          cGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTg                                                                               >  1:9941592/1‑93 (MQ=255)

           ggCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAATATTTGCAGCACCCCCTGATACTgc                                                                              >  2:7717968/1‑93 (MQ=255)

           ggCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTgc                                                                              >  2:8633302/1‑93 (MQ=255)

             cATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTgcgc                                                                            <  2:7556045/93‑1 (MQ=255)

             cATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTgcgc                                                                            >  2:8142167/1‑93 (MQ=255)

              aTGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTTCAGCCCCCCCTGATACTgcgca                                                                           >  1:1925312/1‑92 (MQ=255)

               tGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCa                                                                          >  2:4554135/1‑93 (MQ=255)

                 tAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCAcc                                                                        >  1:119162/1‑93 (MQ=255)

                  aaGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCt                                                                       >  2:5846717/1‑93 (MQ=255)

                  aaGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCt                                                                       >  1:3062889/1‑93 (MQ=255)

                   aGGCAGCTGTTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTg                                                                      <  2:2729260/93‑1 (MQ=255)

                    ggCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGt                                                                     <  2:9576810/93‑1 (MQ=255)

                    ggCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGt                                                                     <  2:7150090/93‑1 (MQ=255)

                    ggCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGt                                                                     <  2:5885531/93‑1 (MQ=255)

                      cAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttc                                                                   >  2:1191117/1‑93 (MQ=255)

                       aGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttct                                                                  <  1:9267040/93‑1 (MQ=255)

                       aGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttct                                                                  >  2:8554952/1‑93 (MQ=255)

                        gctgctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttctt                                                                 >  1:5930647/1‑93 (MQ=255)

                         ctgctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttc                                                                <  1:9982521/93‑1 (MQ=255)

                         ctgctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttc                                                                >  2:2136437/1‑93 (MQ=255)

                         ctgctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttc                                                                <  2:3405663/93‑1 (MQ=255)

                          tgctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttct                                                               <  2:9230727/93‑1 (MQ=255)

                           gctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttctt                                                              >  1:6487039/1‑93 (MQ=255)

                           gctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttctt                                                              >  1:5755834/1‑93 (MQ=255)

                           gctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttctt                                                              >  1:5386772/1‑93 (MQ=255)

                           gctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttctt                                                              >  1:4598716/1‑93 (MQ=255)

                            gttATCTGCTCGGCCATCCAGCGTACGCAAGGTGACGGGTTTATCATTGATCATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttcttc                                                             <  2:5014925/92‑1 (MQ=255)

                            ctTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGttcttcttc                                                             <  1:3733753/93‑1 (MQ=255)

                             ttATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTcc                                                            >  2:4818803/1‑93 (MQ=255)

                             ttATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTcc                                                            <  2:2292862/93‑1 (MQ=255)

                             ttATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTcc                                                            >  2:9662171/1‑93 (MQ=255)

                              tATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCg                                                           >  1:2321253/1‑93 (MQ=255)

                              tATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGGTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCCGTTCTTCTTcca                                                           >  2:9012792/1‑92 (MQ=255)

                               aTCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGa                                                          <  1:397986/93‑1 (MQ=255)

                                 cTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACg                                                        >  1:6755625/1‑93 (MQ=255)

                                 cTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACg                                                        >  2:5125010/1‑93 (MQ=255)

                                  tGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACgg                                                       <  1:4453329/93‑1 (MQ=255)

                                   gCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACggg                                                      >  1:7693239/1‑93 (MQ=255)

                                     tCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGaa                                                    >  2:6180676/1‑93 (MQ=255)

                                      ccGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGaaa                                                   >  2:2923170/1‑93 (MQ=255)

                                        gACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAAcc                                                 >  2:9401157/1‑93 (MQ=255)

                                        gACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAAcc                                                 >  1:3605892/1‑93 (MQ=255)

                                           aTCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACt                                              <  2:484849/93‑1 (MQ=255)

                                            tCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACtt                                             >  2:3780824/1‑93 (MQ=255)

                                            tCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACtt                                             >  1:891312/1‑93 (MQ=255)

                                               aGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTgc                                          <  1:479717/93‑1 (MQ=255)

                                               aGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTgc                                          >  2:4336437/1‑93 (MQ=255)

                                                   tACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCTTTGATACTGCGACACCTGTTCTTCTTCCGACGGGTATCCACTTTgcagca                                      >  2:8289011/1‑93 (MQ=255)

                                                   tACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTgcagca                                      >  2:7467801/1‑93 (MQ=255)

                                                       cAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGaa                                  <  2:133787/93‑1 (MQ=255)

                                                       cAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGaa                                  <  1:6618078/93‑1 (MQ=255)

                                                        aaGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAt                                 <  2:1527274/93‑1 (MQ=255)

                                                        aaGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAt                                 <  1:727043/93‑1 (MQ=255)

                                                        aaGGTGACGGGCTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAt                                 <  2:1860944/93‑1 (MQ=255)

                                                         aGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATg                                <  1:5047305/93‑1 (MQ=255)

                                                         aGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATg                                >  2:3538055/1‑93 (MQ=255)

                                                          ggTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATgg                               >  1:8735509/1‑93 (MQ=255)

                                                            tGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGa                             <  2:3120706/93‑1 (MQ=255)

                                                            tGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGa                             <  1:4407354/93‑1 (MQ=255)

                                                             gACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAt                            >  1:3280080/1‑93 (MQ=255)

                                                             gACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAt                            >  1:8060704/1‑93 (MQ=255)

                                                              aCGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAtt                           <  2:9102648/93‑1 (MQ=255)

                                                              aCGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAtt                           <  1:5599452/93‑1 (MQ=255)

                                                              aCGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAtt                           <  2:9282834/93‑1 (MQ=255)

                                                              aCGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAtt                           <  1:9060090/93‑1 (MQ=255)

                                                                gggTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTc                         >  1:7547868/1‑93 (MQ=255)

                                                                gggTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTc                         <  2:1995691/93‑1 (MQ=255)

                                                                gggTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCAGACGGGAAACCACTTTGCAGCATGAATGGGATTTc                         <  1:1742712/93‑1 (MQ=255)

                                                                 ggTTTATCATTGAACATTTGCAGCCCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCa                        <  2:6535350/93‑1 (MQ=255)

                                                                 ggTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCa                        >  2:542248/1‑93 (MQ=255)

                                                                  gTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAg                       >  1:1434679/1‑93 (MQ=255)

                                                                   tttATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGt                      >  2:6744533/1‑93 (MQ=255)

                                                                    ttATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCTCCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTg                     <  1:8557946/93‑1 (MQ=255)

                                                                    ttATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTg                     >  1:1362078/1‑93 (MQ=255)

                                                                    ttATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTg                     <  2:2544919/93‑1 (MQ=255)

                                                                     tATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGc                    >  1:9126550/1‑93 (MQ=255)

                                                                       tCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGa                  <  1:4163728/93‑1 (MQ=255)

                                                                        cATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAGACCACTTTGCAGCATGAATGGGATTTCAGTGCGAt                 >  1:6216662/1‑93 (MQ=255)

                                                                        cATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGAt                 <  1:6973820/93‑1 (MQ=255)

                                                                        cATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGAt                 <  1:973537/93‑1 (MQ=255)

                                                                         aTTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATa                >  2:7405917/1‑93 (MQ=255)

                                                                          ttGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATaa               >  2:8216867/1‑93 (MQ=255)

                                                                            gAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAg             <  2:9782660/93‑1 (MQ=255)

                                                                             aaCATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGa            >  1:6062004/1‑93 (MQ=255)

                                                                             aaCATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGa            <  1:4926785/93‑1 (MQ=255)

                                                                                 tttGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGa        <  1:2358917/93‑1 (MQ=255)

                                                                                  ttGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGAt       <  2:4475303/93‑1 (MQ=255)

                                                                                    gcagcaCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGc     <  1:954746/93‑1 (MQ=255)

                                                                                     cagcaCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGcc    >  1:7363473/1‑93 (MQ=255)

                                                                                      agcaCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCa   <  1:6889643/93‑1 (MQ=255)

CTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT  >  NC_000913/2964911‑2965090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

TCTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAAT  >  NC_000913/2964908‑2965094

TCTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCAC                                                                                               <  SRR4302540.8011378/94‑1 (MQ=60)

TCTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCAC                                                                                               <  SRR4302540.8493/94‑1 (MQ=60)

 CTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACC                                                                                              >  SRR4302540.1933818/1‑94 (MQ=60)

 CTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACC                                                                                              >  SRR4302540.9476716/1‑94 (MQ=60)

  TCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATCC                                                                                             >  SRR4302540.2182164/1‑94 (MQ=60)

  TCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCC                                                                                             >  SRR4302540.6024023/1‑94 (MQ=60)

   CTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCC                                                                                            >  SRR4302540.2380899/1‑94 (MQ=60)

    TTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCC                                                                                           <  SRR4302540.8294423/94‑1 (MQ=60)

    TTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCC                                                                                           <  SRR4302540.9601178/94‑1 (MQ=60)

     TCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCT                                                                                          <  SRR4302540.5885480/94‑1 (MQ=60)

     TCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCT                                                                                          >  SRR4302540.4903307/1‑94 (MQ=60)

     TCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCT                                                                                          <  SRR4302540.3490777/94‑1 (MQ=60)

      tggTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTG                                                                                         <  SRR4302540.7401501/91‑1 (MQ=60)

      CGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTG                                                                                         <  SRR4302540.9912717/94‑1 (MQ=60)

      CGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTG                                                                                         >  SRR4302540.7074743/1‑94 (MQ=60)

      CGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTG                                                                                         >  SRR4302540.3457587/1‑94 (MQ=60)

        CTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGAT                                                                                       <  SRR4302540.8476029/94‑1 (MQ=60)

        CTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGAT                                                                                       <  SRR4302540.373505/94‑1 (MQ=60)

        CTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGAT                                                                                       <  SRR4302540.2212122/94‑1 (MQ=60)

        CTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGGTTATCATTGAACATTTGCAGCACCCCCTGAT                                                                                       >  SRR4302540.296220/1‑94 (MQ=60)

        CTGATCGGCAAGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGAT                                                                                       >  SRR4302540.6887093/1‑94 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     >  SRR4302540.6170464/1‑94 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     <  SRR4302540.5038932/94‑1 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     >  SRR4302540.1819882/1‑94 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     <  SRR4302540.1028905/94‑1 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     >  SRR4302540.7853074/1‑94 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     <  SRR4302540.5435367/94‑1 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATAC                                                                                     >  SRR4302540.9701967/1‑94 (MQ=60)

          GATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATGAAACATTTGCAGCACCCCCTGCTAC                                                                                     >  SRR4302540.6170463/1‑94 (MQ=60)

           ATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACT                                                                                    >  SRR4302540.320061/1‑94 (MQ=60)

           ATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACT                                                                                    >  SRR4302540.8603962/1‑94 (MQ=60)

           ATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGAAGCACCCCCTGATACT                                                                                    >  SRR4302540.8603963/1‑94 (MQ=60)

            TCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTG                                                                                   >  SRR4302540.10057701/1‑94 (MQ=60)

             CGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGC                                                                                  >  SRR4302540.1877251/1‑94 (MQ=60)

               GCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGC                                                                                <  SRR4302540.2230450/94‑1 (MQ=60)

               GCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGC                                                                                >  SRR4302540.4539126/1‑94 (MQ=60)

               GCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGC                                                                                >  SRR4302540.4765292/1‑94 (MQ=60)

                CATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTTCAGCCCCCCCTGATACTGCGCA                                                                               >  SRR4302540.1946301/1‑94 (MQ=60)

                CATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCC                                                                               >  SRR4302540.8552021/1‑94 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGGCA                                                                              >  SRR4302540.9213357/1‑94 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCA                                                                              <  SRR4302540.3830572/94‑1 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCA                                                                              >  SRR4302540.1331494/1‑94 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCA                                                                              >  SRR4302540.9030253/1‑94 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCA                                                                              >  SRR4302540.6571885/1‑94 (MQ=60)

                 ATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCA                                                                              >  SRR4302540.6879506/1‑94 (MQ=60)

                  TGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCGC                                                                             >  SRR4302540.6125113/1‑94 (MQ=60)

                   GTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACC                                                                            <  SRR4302540.3379694/94‑1 (MQ=60)

                   GTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACC                                                                            >  SRR4302540.120446/1‑94 (MQ=60)

                    TAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCT                                                                           >  SRR4302540.3096490/1‑94 (MQ=60)

                    TAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCT                                                                           >  SRR4302540.3439770/1‑94 (MQ=60)

                    TAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCT                                                                           <  SRR4302540.5979808/94‑1 (MQ=60)

                     AAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTG                                                                          >  SRR4302540.103636/1‑94 (MQ=60)

                        GCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTC                                                                       >  SRR4302540.8619122/1‑94 (MQ=60)

                        GCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTC                                                                       >  SRR4302540.7538495/1‑94 (MQ=60)

                        GCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGAAGTACCCCCTGATACTGCGCCACCTtttt                                                                       >  SRR4302540.7538496/1‑90 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTT                                                                     >  SRR4302540.830634/1‑94 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTT                                                                     <  SRR4302540.9377874/94‑1 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTT                                                                     >  SRR4302540.5996181/1‑94 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTT                                                                     <  SRR4302540.4037502/94‑1 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCGTTTCTT                                                                     >  SRR4302540.398249/1‑94 (MQ=60)

                          AGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGCTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTT                                                                     >  SRR4302540.10092907/1‑94 (MQ=60)

                           GCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTC                                                                    <  SRR4302540.8180105/94‑1 (MQ=60)

                           GCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTC                                                                    <  SRR4302540.6735603/94‑1 (MQ=60)

                           GCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTC                                                                    <  SRR4302540.1232964/94‑1 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   >  SRR4302540.5081972/1‑94 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   <  SRR4302540.9470030/94‑1 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   <  SRR4302540.928198/94‑1 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   >  SRR4302540.6749011/1‑94 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   <  SRR4302540.5996802/94‑1 (MQ=60)

                            CTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCT                                                                   <  SRR4302540.10098916/94‑1 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCCCCTGTTCTTCTT                                                                  >  SRR4302540.6559181/1‑94 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTT                                                                  >  SRR4302540.6559182/1‑94 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTT                                                                  >  SRR4302540.5446021/1‑94 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTT                                                                  >  SRR4302540.7219965/1‑94 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTT                                                                  >  SRR4302540.4648154/1‑94 (MQ=60)

                             TGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTT                                                                  >  SRR4302540.5819368/1‑94 (MQ=60)

                              GCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTC                                                                 >  SRR4302540.8178829/1‑94 (MQ=60)

                              GCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTC                                                                 >  SRR4302540.9907324/1‑94 (MQ=60)

                               CTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCC                                                                >  SRR4302540.5370776/1‑94 (MQ=60)

                               CTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCC                                                                <  SRR4302540.3774489/94‑1 (MQ=60)

                               CTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCC                                                                <  SRR4302540.7429895/94‑1 (MQ=60)

                                TTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCG                                                               >  SRR4302540.2346249/1‑94 (MQ=60)

                                TTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCG                                                               <  SRR4302540.863094/94‑1 (MQ=60)

                                  ATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGAC                                                             <  SRR4302540.402114/94‑1 (MQ=60)

                                  ATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGAC                                                             <  SRR4302540.6903171/94‑1 (MQ=60)

                                   TCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACG                                                            >  SRR4302540.6830270/1‑94 (MQ=60)

                                   TCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACG                                                            >  SRR4302540.9456581/1‑94 (MQ=60)

                                   TCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACG                                                            <  SRR4302540.7050914/94‑1 (MQ=60)

                                   TCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACG                                                            >  SRR4302540.9896894/1‑94 (MQ=60)

                                    CTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGG                                                           >  SRR4302540.6470147/1‑94 (MQ=60)

                                    CTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGG                                                           >  SRR4302540.9225513/1‑94 (MQ=60)

                                     TGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCCCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGG                                                          <  SRR4302540.9190719/94‑1 (MQ=60)

                                     TGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGG                                                          <  SRR4302540.4501604/94‑1 (MQ=60)

                                     TGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGG                                                          >  SRR4302540.7780801/1‑94 (MQ=60)

                                      GCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGA                                                         <  SRR4302540.4461781/94‑1 (MQ=60)

                                       CTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAA                                                        >  SRR4302540.4230055/1‑94 (MQ=60)

                                       CTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAA                                                        <  SRR4302540.3725812/94‑1 (MQ=60)

                                       CTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAA                                                        >  SRR4302540.1079899/1‑94 (MQ=60)

                                         CCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAAC                                                      >  SRR4302540.4551647/1‑94 (MQ=60)

                                          CGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACC                                                     >  SRR4302540.393333/1‑94 (MQ=60)

                                          CGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACC                                                     >  SRR4302540.3645299/1‑94 (MQ=60)

                                          CGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACC                                                     >  SRR4302540.2408548/1‑94 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAACCCA                                                    >  SRR4302540.7366768/1‑94 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCA                                                    >  SRR4302540.4602826/1‑94 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCA                                                    >  SRR4302540.230437/1‑94 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCA                                                    >  SRR4302540.6158431/1‑94 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCA                                                    <  SRR4302540.5389875/94‑1 (MQ=60)

                                           GACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTAATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCA                                                    <  SRR4302540.874768/94‑1 (MQ=60)

                                            ACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCAC                                                   <  SRR4302540.1629044/94‑1 (MQ=60)

                                              ATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTT                                                 >  SRR4302540.900786/1‑94 (MQ=60)

                                              ATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTT                                                 >  SRR4302540.5655097/1‑94 (MQ=60)

                                              ATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTT                                                 >  SRR4302540.2373818/1‑94 (MQ=60)

                                                CCAGCGTACGCAAGGTGACGTGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTG                                               <  SRR4302540.7048352/94‑1 (MQ=60)

                                                CCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTG                                               <  SRR4302540.3047635/94‑1 (MQ=60)

                                                  AGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCA                                             <  SRR4302540.1003378/94‑1 (MQ=60)

                                                  AGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCA                                             <  SRR4302540.484858/94‑1 (MQ=60)

                                                   GCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAG                                            <  SRR4302540.6638122/94‑1 (MQ=60)

                                                     GTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCA                                          >  SRR4302540.4731923/1‑94 (MQ=60)

                                                      TACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCAT                                         <  SRR4302540.1500363/94‑1 (MQ=60)

                                                       ACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATG                                        >  SRR4302540.9136655/1‑94 (MQ=60)

                                                          CAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAT                                     <  SRR4302540.6691367/94‑1 (MQ=60)

                                                          CAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAT                                     <  SRR4302540.1412995/94‑1 (MQ=60)

                                                          CAAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAAT                                     <  SRR4302540.7865495/94‑1 (MQ=60)

                                                          CAAGGGGGCGGGTTTATCATTGAACATGTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTGGCAGCATGAAT                                     <  SRR4302540.1412996/94‑1 (MQ=60)

                                                           AAGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATG                                    <  SRR4302540.734833/94‑1 (MQ=60)

                                                            AGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGG                                   <  SRR4302540.5101888/94‑1 (MQ=60)

                                                            AGGTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGG                                   >  SRR4302540.8836941/1‑94 (MQ=60)

                                                              GTGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGA                                 >  SRR4302540.1924294/1‑94 (MQ=60)

                                                               TGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAT                                >  SRR4302540.8154276/1‑94 (MQ=60)

                                                               TGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAT                                <  SRR4302540.9873359/94‑1 (MQ=60)

                                                               TGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAT                                <  SRR4302540.4455137/94‑1 (MQ=60)

                                                               TGACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGAT                                >  SRR4302540.3315907/1‑94 (MQ=60)

                                                                GACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATT                               <  SRR4302540.2517341/94‑1 (MQ=60)

                                                                GACGGGGTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATT                               >  SRR4302540.837236/1‑94 (MQ=60)

                                                                 GCGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTT                              <  SRR4302540.3205527/94‑1 (MQ=60)

                                                                 ACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTT                              <  SRR4302540.9168868/94‑1 (MQ=60)

                                                                 ACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTT                              >  SRR4302540.9749326/1‑94 (MQ=60)

                                                                 ACGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTT                              <  SRR4302540.5661057/94‑1 (MQ=60)

                                                                  CGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTC                             >  SRR4302540.7632465/1‑94 (MQ=60)

                                                                  CGGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTC                             >  SRR4302540.1441774/1‑94 (MQ=60)

                                                                   GGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCA                            >  SRR4302540.10017611/1‑94 (MQ=60)

                                                                   GGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCA                            >  SRR4302540.4936156/1‑94 (MQ=60)

                                                                   GGGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCAGACGGGAAACCACTTTGCAGCATGAATGGGATTTCA                            <  SRR4302540.1761569/94‑1 (MQ=60)

                                                                    GGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAG                           >  SRR4302540.6988619/1‑94 (MQ=60)

                                                                    GGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAG                           <  SRR4302540.3571313/94‑1 (MQ=60)

                                                                    GGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAG                           >  SRR4302540.1450234/1‑94 (MQ=60)

                                                                    GGTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAG                           >  SRR4302540.1450233/1‑94 (MQ=60)

                                                                     GTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGT                          >  SRR4302540.3702188/1‑94 (MQ=60)

                                                                     GTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGT                          >  SRR4302540.4071452/1‑94 (MQ=60)

                                                                     GTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGT                          <  SRR4302540.8598301/94‑1 (MQ=60)

                                                                     GTTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGT                          >  SRR4302540.3516375/1‑94 (MQ=60)

                                                                      TTTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTG                         >  SRR4302540.1376467/1‑94 (MQ=60)

                                                                       TTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCTCCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGC                        <  SRR4302540.8657346/94‑1 (MQ=60)

                                                                       TTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGC                        >  SRR4302540.9236256/1‑94 (MQ=60)

                                                                       TTATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGC                        >  SRR4302540.5062793/1‑94 (MQ=60)

                                                                         ATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGA                      >  SRR4302540.4263464/1‑94 (MQ=60)

                                                                         ATCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGA                      <  SRR4302540.448495/94‑1 (MQ=60)

                                                                          TCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAGACCACTTTGCAGCATGAATGGGATTTCAGTGCGAT                     >  SRR4302540.6285828/1‑94 (MQ=60)

                                                                          TCATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGAT                     <  SRR4302540.4208860/94‑1 (MQ=60)

                                                                           CATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATA                    <  SRR4302540.983541/94‑1 (MQ=60)

                                                                           CATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATA                    <  SRR4302540.7051324/94‑1 (MQ=60)

                                                                            ATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAA                   <  SRR4302540.8457206/94‑1 (MQ=60)

                                                                            ATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAA                   <  SRR4302540.3053496/94‑1 (MQ=60)

                                                                            ATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAA                   >  SRR4302540.1266374/1‑94 (MQ=60)

                                                                            ATTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTACGACGGGAAACAACTTTGCAGCATGAATGGTATTTCAttgcgctac                   >  SRR4302540.1266373/1‑85 (MQ=60)

                                                                             TTGAACATTTGCAGCGCCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  <  SRR4302540.8658361/94‑1 (MQ=60)

                                                                             TTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCTGACGGGTAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  <  SRR4302540.8928507/94‑1 (MQ=60)

                                                                             TTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  >  SRR4302540.2088947/1‑94 (MQ=60)

                                                                             TTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  <  SRR4302540.4677433/94‑1 (MQ=60)

                                                                             TTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  <  SRR4302540.8658360/94‑1 (MQ=60)

                                                                             TTGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGGTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAA                  <  SRR4302540.2827870/94‑1 (MQ=60)

                                                                              TGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAG                 <  SRR4302540.5771010/94‑1 (MQ=60)

                                                                              TGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAG                 <  SRR4302540.9330482/94‑1 (MQ=60)

                                                                              TGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAG                 <  SRR4302540.8883650/94‑1 (MQ=60)

                                                                              TGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAG                 <  SRR4302540.5771011/94‑1 (MQ=60)

                                                                              TGAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAG                 >  SRR4302540.2006534/1‑94 (MQ=60)

                                                                               GAACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGA                >  SRR4302540.6129381/1‑94 (MQ=60)

                                                                                AACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGAC               <  SRR4302540.4979889/94‑1 (MQ=60)

                                                                                 ACATTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACC              >  SRR4302540.7711419/1‑94 (MQ=60)

                                                                                    TTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGAT           <  SRR4302540.10091079/94‑1 (MQ=60)

                                                                                    TTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGAT           <  SRR4302540.300594/94‑1 (MQ=60)

                                                                                    TTTGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGAT           <  SRR4302540.2384326/94‑1 (MQ=60)

                                                                                      TGCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGC         >  SRR4302540.4355182/1‑94 (MQ=60)

                                                                                       GCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCC        <  SRR4302540.964646/94‑1 (MQ=60)

                                                                                       GCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCC        <  SRR4302540.7715745/94‑1 (MQ=60)

                                                                                       GCAGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCC        >  SRR4302540.7445579/1‑94 (MQ=60)

                                                                                       GCAGCACCCCCTGATACTGCGCCACCTGTTCTTCGTCCGACGGGAAACCTCTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCC        <  SRR4302540.6684072/94‑1 (MQ=60)

                                                                                         AGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT      >  SRR4302540.7683713/1‑94 (MQ=60)

                                                                                         AGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT      >  SRR4302540.5735321/1‑94 (MQ=60)

                                                                                         AGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT      <  SRR4302540.6966039/94‑1 (MQ=60)

                                                                                         AGCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCAT      >  SRR4302540.8070927/1‑94 (MQ=60)

                                                                                          GCACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATC     >  SRR4302540.2654819/1‑94 (MQ=60)

                                                                                           CACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCA    >  SRR4302540.846664/1‑94 (MQ=60)

                                                                                            ACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAA   >  SRR4302540.491728/1‑94 (MQ=60)

                                                                                            ACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAA   >  SRR4302540.4757514/1‑94 (MQ=60)

                                                                                            ACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAA   >  SRR4302540.10079581/1‑94 (MQ=60)

                                                                                            ACCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAA   <  SRR4302540.5561322/94‑1 (MQ=60)

                                                                                             CCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAAT  <  SRR4302540.4340765/94‑1 (MQ=60)

                                                                                             CCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAAT  <  SRR4302540.9640054/94‑1 (MQ=60)

                                                                                             CCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAAT  >  SRR4302540.3613049/1‑94 (MQ=60)

TCTCTTCGCTGATCGGCATGTAAGGCAGCTGCTTATCTGCTCCGACATCCAGCGTACGCAAGGTGACGGGTTTATCATTGAACATTTGCAGCATCCCCTGATACTGCGCCACCTGTTCTTCTTCCGACGGGAAACCACTTTGCAGCATGAATGGGATTTCAGTGCGATAAAGACCGATGCCATCAAT  >  NC_000913/2964908‑2965094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`