Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1548	369.5	20095359	96.9%	19472402	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,971,616	A→G	L90P (CTG→CCG)	ygeD ←	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,971,616	0	A	G	100.0%	882.9 / NA	276	L90P (CTG→CCG)	ygeD	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (140/136); total (140/136)

Only 100 of 297 total aligned reads displayed.

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

tCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCt                                                                                        <  1:8061968/93‑1 (MQ=255)

   ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  1:8959498/93‑1 (MQ=255)

   ccGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCa                                                                                     <  1:3969197/93‑1 (MQ=255)

    cGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAg                                                                                    <  1:5289337/93‑1 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg                                                                                   <  2:2509878/93‑1 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAgg                                                                                   >  1:3158392/1‑93 (MQ=255)

     ggTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAgg                                                                                   >  1:1141607/1‑93 (MQ=255)

      gTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGc                                                                                  >  2:2972510/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                <  1:5611406/93‑1 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  1:88760/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  2:6101852/1‑93 (MQ=255)

        gAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCg                                                                                >  2:4154148/1‑93 (MQ=255)

           tAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTg                                                                             >  2:2797706/1‑93 (MQ=255)

           tAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTg                                                                             <  1:4262950/93‑1 (MQ=255)

                  cagcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTAGCTGCGCCCATCGGCTTCAGGCCGTTGGCAAAca                                                                      >  2:5600562/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    >  1:504005/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAcatc                                                                    >  2:5391296/1‑93 (MQ=255)

                    gcaCCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTACGCCCAGCGGCTTCAGGCCGTGGGCAAAcatc                                                                    >  1:7290222/1‑93 (MQ=255)

                       ccAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACatcatc                                                                 <  2:5306959/93‑1 (MQ=255)

                        cAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACAtcatca                                                                <  1:7960750/93‑1 (MQ=255)

                        cAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACAtcatca                                                                <  1:9657407/93‑1 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc                                                               >  1:1689312/1‑93 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAc                                                               <  2:1022181/93‑1 (MQ=255)

                         aaCACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCCGTGGCAAACATCATCAc                                                               >  1:6309981/1‑93 (MQ=255)

                          acacCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAcc                                                              <  2:9533583/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATGCTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCcccc                                                             <  2:2227680/93‑1 (MQ=255)

                           cacccaccAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAccc                                                             >  2:4670630/1‑93 (MQ=255)

                             ccagccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGCCCGTTGGCAAACATCATCACCCgg                                                           <  2:6881590/89‑1 (MQ=255)

                              ccaccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGc                                                          <  1:4919999/93‑1 (MQ=255)

                              ccaccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGc                                                          >  2:5819777/1‑93 (MQ=255)

                               caccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGcc                                                         <  2:853905/93‑1 (MQ=255)

                               caccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGcc                                                         >  1:7123563/1‑93 (MQ=255)

                                accaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAAATCATCCCCCGGCCt                                                        >  1:2405957/1‑93 (MQ=255)

                                 ccaGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCtt                                                       <  2:4885547/93‑1 (MQ=255)

                                   aGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTg                                                     >  1:2699523/1‑93 (MQ=255)

                                    gCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTgg                                                    <  1:5740436/93‑1 (MQ=255)

                                      gTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCg                                                  >  1:6877131/1‑93 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCTCCCAGCGGCTTCAGGCCGTTGGCAACCATCATCACCCGGCCTTTGTCGa                                                 >  1:1431149/1‑93 (MQ=255)

                                       tataGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGa                                                 >  2:1325347/1‑93 (MQ=255)

                                        ataGCCGAGAAACGTATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGaa                                                <  2:4219447/93‑1 (MQ=255)

                                         taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg                                               <  1:1189542/93‑1 (MQ=255)

                                         taGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAg                                               >  2:7073283/1‑93 (MQ=255)

                                          aGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGc                                              >  1:3650098/1‑93 (MQ=255)

                                           gCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCt                                             <  1:4459495/93‑1 (MQ=255)

                                            ccGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTa                                            <  1:2217184/93‑1 (MQ=255)

                                             cGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTAt                                           <  2:9396893/93‑1 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          >  2:5985243/1‑93 (MQ=255)

                                              gagaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATc                                          >  2:6719674/1‑93 (MQ=255)

                                               agaATCGGATTGGTGCCAAAGCAGATTCGGGCGCCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCCCCCGTCCTTTGGCGAAGCTAGcc                                         <  2:6490614/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATCCTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  2:3417738/93‑1 (MQ=255)

                                               agaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATcc                                         <  1:5900058/93‑1 (MQ=255)

                                                gaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCg                                        >  2:8216065/1‑93 (MQ=255)

                                                gaAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCg                                        >  1:1606864/1‑93 (MQ=255)

                                                    cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc                                    <  1:1968088/93‑1 (MQ=255)

                                                    cGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAc                                    <  1:7916685/93‑1 (MQ=255)

                                                         tGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGcc                               <  1:5429167/93‑1 (MQ=255)

                                                          taTACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              <  1:6513944/92‑1 (MQ=255)

                                                          gATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              <  1:4795/93‑1 (MQ=255)

                                                          gATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGccc                              >  2:3493114/1‑93 (MQ=255)

                                                           agaCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAcccgcccg                             >  2:8936641/3‑93 (MQ=255)

                                                            tACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGa                            >  2:2114246/1‑93 (MQ=255)

                                                             aCCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGAc                           <  1:5125708/93‑1 (MQ=255)

                                                              ccAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATACGCCACCTGCCCGACa                          >  2:6627746/1‑93 (MQ=255)

                                                               cAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaa                         >  2:370377/1‑93 (MQ=255)

                                                                aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa                        <  1:1058495/93‑1 (MQ=255)

                                                                aaaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACaaa                        >  2:739567/1‑93 (MQ=255)

                                                                 aaGCAGATACTGTCTGCCCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAATCTATCCGCCACCTGCCCGACAAAc                       <  1:6951399/93‑1 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATGCGCCACCTGCCCGACAGAc                       >  2:7622963/1‑93 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       >  1:3327161/1‑93 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       <  1:3948696/93‑1 (MQ=255)

                                                                 aaGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAc                       >  2:178786/1‑93 (MQ=255)

                                                                    cAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgc                    <  1:456150/93‑1 (MQ=255)

                                                                     aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg                   >  2:3169602/1‑93 (MQ=255)

                                                                     aGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcg                   <  2:7997648/93‑1 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  1:8727938/1‑93 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  2:4502548/1‑93 (MQ=255)

                                                                      gATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGgcgc                  >  1:8447556/1‑93 (MQ=255)

                                                                        tACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaa                >  1:7020830/1‑93 (MQ=255)

                                                                          cgggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaa              <  2:7937546/91‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCataaa             >  1:6770409/1‑93 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  1:7628781/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  1:9212876/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaaa             <  2:9277347/93‑1 (MQ=255)

                                                                           tGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACCGCGCaaaaa             >  1:3815754/1‑93 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCCTCAACCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCaaaacg            >  2:3618980/1‑91 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            >  1:945131/1‑93 (MQ=255)

                                                                            ggCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            <  1:3569295/93‑1 (MQ=255)

                                                                            ggCTCCGCCCAGCGGCGTCAGGCCGTTTGCAAACATCATCCCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAg            <  2:7536690/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  1:8550626/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          <  2:882449/93‑1 (MQ=255)

                                                                              cTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGaa          >  1:8280630/1‑93 (MQ=255)

                                                                                gcgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATg        >  2:9621753/1‑93 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCTCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACGAACGGCGCAAAAAGAATGt       <  1:6351516/93‑1 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGt       >  2:6139971/1‑93 (MQ=255)

                                                                                 cgcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGt       <  2:3978682/93‑1 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      >  2:2336504/1‑93 (MQ=255)

                                                                                  gcCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTa      <  1:9843168/93‑1 (MQ=255)

                                                                                   cccAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTaa     >  2:5347818/1‑93 (MQ=255)

                                                                                   cccAGCGCCTTCATGGCGTTGGCAAACAGCATCACCCGGCCTGTGGCTAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTaa     <  1:3481032/93‑1 (MQ=255)

                                                                                     cagcggCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGc   <  2:6303539/93‑1 (MQ=255)

TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA  >  NC_000913/2971527‑2971705

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCACCT  >  NC_000913/2971523‑2971708

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.7398320/94‑1 (MQ=60)

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.7398318/94‑1 (MQ=60)

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.5696319/94‑1 (MQ=60)

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.5696320/94‑1 (MQ=60)

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.5432773/94‑1 (MQ=60)

TATGTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCG                                                                                              <  SRR4302540.7398317/94‑1 (MQ=60)

 ATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGG                                                                                             <  SRR4302540.4936652/94‑1 (MQ=60)

   TTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCT                                                                                           >  SRR4302540.5638814/1‑94 (MQ=60)

   TTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCT                                                                                           >  SRR4302540.9494801/1‑94 (MQ=60)

    TCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTT                                                                                          <  SRR4302540.8155546/94‑1 (MQ=60)

     CGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTC                                                                                         >  SRR4302540.3746834/1‑94 (MQ=60)

      GCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCA                                                                                        <  SRR4302540.7613686/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.4011987/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.5791641/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.9065451/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.9257961/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.5408899/94‑1 (MQ=60)

       CCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAG                                                                                       <  SRR4302540.2920425/94‑1 (MQ=60)

        CGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGG                                                                                      >  SRR4302540.9294540/1‑94 (MQ=60)

        CGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGG                                                                                      >  SRR4302540.3192762/1‑94 (MQ=60)

        CGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGG                                                                                      <  SRR4302540.5347151/94‑1 (MQ=60)

        CGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGG                                                                                      >  SRR4302540.1153541/1‑94 (MQ=60)

         GGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCGGGC                                                                                     >  SRR4302540.8496035/1‑94 (MQ=60)

           TGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCG                                                                                   >  SRR4302540.89697/1‑94 (MQ=60)

            GAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGT                                                                                  >  SRR4302540.8696698/1‑94 (MQ=60)

            GAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGT                                                                                  <  SRR4302540.5673135/94‑1 (MQ=60)

             AATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCATCGGCTTCAGGCCGTT                                                                                 >  SRR4302540.7052892/1‑94 (MQ=60)

              ATAGGCTGCAGCACCAACACCCACCA‑‑‑‑‑‑‑‑CCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAAAT                                                                        >  SRR4302540.2585341/1‑94 (MQ=60)

               TAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGG                                                                               <  SRR4302540.4309317/94‑1 (MQ=60)

                AGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGC                                                                              >  SRR4302540.4008628/1‑94 (MQ=60)

                   CTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAA                                                                           >  SRR4302540.9621147/1‑94 (MQ=60)

                   CTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAA                                                                           <  SRR4302540.5868721/94‑1 (MQ=60)

                       AGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATC                                                                       >  SRR4302540.509402/1‑94 (MQ=60)

                       AGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTACGCCCAGCGGCTTCAGGCCGTGGGCAAACATC                                                                       >  SRR4302540.7371577/1‑94 (MQ=60)

                        GCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCA                                                                      <  SRR4302540.4740627/94‑1 (MQ=60)

                        GCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCA                                                                      <  SRR4302540.6636194/94‑1 (MQ=60)

                         CACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCAT                                                                     <  SRR4302540.3519074/94‑1 (MQ=60)

                         CACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCAT                                                                     <  SRR4302540.2361084/94‑1 (MQ=60)

                          ACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATC                                                                    <  SRR4302540.4828608/94‑1 (MQ=60)

                          ACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATC                                                                    <  SRR4302540.4965105/94‑1 (MQ=60)

                           CCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCA                                                                   >  SRR4302540.9877384/1‑94 (MQ=60)

                           CCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCA                                                                   >  SRR4302540.3506938/1‑94 (MQ=60)

                           CCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCA                                                                   <  SRR4302540.9968571/94‑1 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCAcaac                                                                  >  SRR4302540.1707628/1‑90 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAC                                                                  >  SRR4302540.1707629/1‑94 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAC                                                                  <  SRR4302540.8053527/94‑1 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAC                                                                  <  SRR4302540.9771095/94‑1 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCCGTGGCAAACATCATCAC                                                                  >  SRR4302540.6380248/1‑94 (MQ=60)

                            CAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGAAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGGTGGCAAACATCGTCAC                                                                  >  SRR4302540.2722788/1‑94 (MQ=60)

                              ACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCC                                                                <  SRR4302540.5133024/94‑1 (MQ=60)

                               CACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCG                                                               <  SRR4302540.3911258/94‑1 (MQ=60)

                               CACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCG                                                               >  SRR4302540.55848/1‑94 (MQ=60)

                               CACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCG                                                               <  SRR4302540.3263186/94‑1 (MQ=60)

                               CACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCG                                                               >  SRR4302540.4573855/1‑94 (MQ=60)

                               CACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGGTGGCAAACATCATCACCCG                                                               >  SRR4302540.9944569/1‑94 (MQ=60)

                                  CCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCC                                                            <  SRR4302540.4972999/94‑1 (MQ=60)

                                  CCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCC                                                            >  SRR4302540.7202891/1‑94 (MQ=60)

                                  CCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCC                                                            >  SRR4302540.1707465/1‑94 (MQ=60)

                                  CCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCAACCCGCC                                                            >  SRR4302540.2413471/1‑94 (MQ=60)

                                   CACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCT                                                           <  SRR4302540.8613936/94‑1 (MQ=60)

                                   CACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAAAATCATCCCCCGGCCT                                                           >  SRR4302540.2431900/1‑94 (MQ=60)

                                    ACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTT                                                          >  SRR4302540.4916294/1‑94 (MQ=60)

                                     CCATCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTT                                                         >  SRR4302540.6840101/1‑94 (MQ=60)

                                     CCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTT                                                         >  SRR4302540.8033928/1‑94 (MQ=60)

                                     CCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTT                                                         <  SRR4302540.1519342/94‑1 (MQ=60)

                                      CAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTG                                                        >  SRR4302540.2728660/1‑94 (MQ=60)

                                      CAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTG                                                        <  SRR4302540.8059632/94‑1 (MQ=60)

                                       AGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGG                                                       <  SRR4302540.8400879/94‑1 (MQ=60)

                                       AGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCCGCCTTTGG                                                       >  SRR4302540.7595136/1‑94 (MQ=60)

                                        GCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGC                                                      <  SRR4302540.5803710/94‑1 (MQ=60)

                                         CGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCCGGCCGTTGGCAAACATCATCACCCGGCCTTTTGCG                                                     >  SRR4302540.6953359/1‑94 (MQ=60)

                                         CGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCG                                                     >  SRR4302540.6069943/1‑94 (MQ=60)

                                         CGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTCGCG                                                     >  SRR4302540.6953360/1‑94 (MQ=60)

                                          GTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCTCCCAGCGGCTTCAGGCCGTTGGCAACCATCATCACCCGGCCTTTGTCGA                                                    >  SRR4302540.1446655/1‑94 (MQ=60)

                                          GTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGA                                                    >  SRR4302540.119302/1‑94 (MQ=60)

                                           TATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAA                                                   >  SRR4302540.6421402/1‑94 (MQ=60)

                                            ATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAG                                                  <  SRR4302540.3686626/94‑1 (MQ=60)

                                             TAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGC                                                 <  SRR4302540.6896258/94‑1 (MQ=60)

                                             TAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGC                                                 >  SRR4302540.3690087/1‑94 (MQ=60)

                                             TAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGC                                                 <  SRR4302540.1201805/94‑1 (MQ=60)

                                              AGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCACGCCGTTGGCAAACATCATCACCCCGACTTTGGCGAAGCT                                                >  SRR4302540.3897799/1‑94 (MQ=60)

                                               GCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTA                                               <  SRR4302540.4507840/94‑1 (MQ=60)

                                                ncanananagnATTGATACCANANCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGNTGGCANACATCNTCACCCGGCCTTTGGCGAAGCTAT                                              <  SRR4302540.10063480/83‑1 (MQ=60)

                                                CCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTAT                                              <  SRR4302540.2241103/94‑1 (MQ=60)

                                                 CGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCCTTGGCAAACATCATCACCCGGCCTTTTGCGAAGCTATC                                             >  SRR4302540.820563/1‑94 (MQ=60)

                                                  GAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCC                                            <  SRR4302540.7195773/94‑1 (MQ=60)

                                                  GAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCC                                            <  SRR4302540.4193116/94‑1 (MQ=60)

                                                   AGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCG                                           >  SRR4302540.1624452/1‑94 (MQ=60)

                                                   AGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCG                                           <  SRR4302540.5965214/94‑1 (MQ=60)

                                                   AGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCG                                           <  SRR4302540.1262509/94‑1 (MQ=60)

                                                     AAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCC                                         <  SRR4302540.8666438/94‑1 (MQ=60)

                                                       ACGTATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAC                                       <  SRR4302540.2194983/94‑1 (MQ=60)

                                                       ACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCAC                                       >  SRR4302540.4002057/1‑94 (MQ=60)

                                                        CGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACC                                      <  SRR4302540.7794633/94‑1 (MQ=60)

                                                        CGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACC                                      <  SRR4302540.1989461/94‑1 (MQ=60)

                                                        CGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACC                                      <  SRR4302540.8008975/94‑1 (MQ=60)

                                                         GGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCT                                     <  SRR4302540.4564202/94‑1 (MQ=60)

                                                         GGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCT                                     >  SRR4302540.8990274/1‑94 (MQ=60)

                                                         GGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCAGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCT                                     >  SRR4302540.8831398/1‑94 (MQ=60)

                                                            TTGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCC                                  <  SRR4302540.4153859/94‑1 (MQ=60)

                                                             TGATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCC                                 <  SRR4302540.5488881/94‑1 (MQ=60)

                                                             TGAGACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCC                                 <  SRR4302540.5488880/94‑1 (MQ=60)

                                                              TATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCG                                <  SRR4302540.6586308/94‑1 (MQ=60)

                                                              GATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCG                                >  SRR4302540.1954610/1‑94 (MQ=60)

                                                              GATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCG                                >  SRR4302540.2038914/1‑94 (MQ=60)

                                                              GATACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCG                                <  SRR4302540.4852/94‑1 (MQ=60)

                                                                TACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGAC                              <  SRR4302540.3789266/94‑1 (MQ=60)

                                                                TACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGAC                              >  SRR4302540.1157784/1‑94 (MQ=60)

                                                                 ACCAAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACA                             <  SRR4302540.5181220/94‑1 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          >  SRR4302540.8052314/1‑94 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          <  SRR4302540.1069272/94‑1 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          <  SRR4302540.4500282/94‑1 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          <  SRR4302540.1230486/94‑1 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          >  SRR4302540.3363672/1‑94 (MQ=60)

                                                                    AAAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAAC                          <  SRR4302540.3313302/94‑1 (MQ=60)

                                                                     AAGCAGATACTGTCTGCCCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAATCTATCCGCCACCTGCCCGACAAACG                         <  SRR4302540.7028739/94‑1 (MQ=60)

                                                                     AAGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACG                         <  SRR4302540.3991326/94‑1 (MQ=60)

                                                                     AAGCAGATACTGCCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCAGCTCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACG                         <  SRR4302540.807885/94‑1 (MQ=60)

                                                                      AGCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGG                        <  SRR4302540.51573/94‑1 (MQ=60)

                                                                       GCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGC                       <  SRR4302540.7090360/94‑1 (MQ=60)

                                                                       GCAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGC                       >  SRR4302540.4501385/1‑94 (MQ=60)

                                                                        CAGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCG                      <  SRR4302540.461024/94‑1 (MQ=60)

                                                                         AGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGC                     >  SRR4302540.8545619/1‑94 (MQ=60)

                                                                         AGATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGC                     >  SRR4302540.8829290/1‑94 (MQ=60)

                                                                          GATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCA                    >  SRR4302540.9332026/1‑94 (MQ=60)

                                                                           ATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAA                   >  SRR4302540.7098809/1‑94 (MQ=60)

                                                                           ATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAA                   >  SRR4302540.2597672/1‑94 (MQ=60)

                                                                           ATACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAA                   >  SRR4302540.3183577/1‑94 (MQ=60)

                                                                            TACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAA                  <  SRR4302540.7328768/94‑1 (MQ=60)

                                                                             ACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAA                 >  SRR4302540.8075613/1‑94 (MQ=60)

                                                                             ACTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAA                 >  SRR4302540.629067/1‑94 (MQ=60)

                                                                              CTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCATAAA                >  SRR4302540.6845234/1‑94 (MQ=60)

                                                                              CTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAA                <  SRR4302540.3395473/94‑1 (MQ=60)

                                                                              CTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAA                >  SRR4302540.1899037/1‑94 (MQ=60)

                                                                              CTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAA                <  SRR4302540.8372074/94‑1 (MQ=60)

                                                                              CTGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACCGCGCAAAAA                >  SRR4302540.3857301/1‑94 (MQ=60)

                                                                               TGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAG               >  SRR4302540.954990/1‑94 (MQ=60)

                                                                               TGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAG               <  SRR4302540.7714576/94‑1 (MQ=60)

                                                                               TGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAG               <  SRR4302540.7131252/94‑1 (MQ=60)

                                                                               TGGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAG               <  SRR4302540.9323412/94‑1 (MQ=60)

                                                                                GGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGA              <  SRR4302540.3608285/94‑1 (MQ=60)

                                                                                GGCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGA              <  SRR4302540.3608284/94‑1 (MQ=60)

                                                                                 GCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAA             >  SRR4302540.8376802/1‑94 (MQ=60)

                                                                                 GCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAA             <  SRR4302540.3662342/94‑1 (MQ=60)

                                                                                 GCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAA             <  SRR4302540.70198/94‑1 (MQ=60)

                                                                                 GCTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAA             <  SRR4302540.7844608/94‑1 (MQ=60)

                                                                                  CTGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAAT            <  SRR4302540.8649947/94‑1 (MQ=60)

                                                                                   TGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATG           <  SRR4302540.8618758/94‑1 (MQ=60)

                                                                                   TGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATG           <  SRR4302540.1590786/94‑1 (MQ=60)

                                                                                   TGCGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATG           >  SRR4302540.5814837/1‑94 (MQ=60)

                                                                                     CGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCTCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACGAACGGCGCAAAAAGAATGTA         <  SRR4302540.6422249/94‑1 (MQ=60)

                                                                                     CGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTA         <  SRR4302540.6422250/94‑1 (MQ=60)

                                                                                     CGCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTA         <  SRR4302540.6422248/94‑1 (MQ=60)

                                                                                      GCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCGCCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAA        <  SRR4302540.4993455/94‑1 (MQ=60)

                                                                                      GCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAA        <  SRR4302540.9958231/94‑1 (MQ=60)

                                                                                      GCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAA        <  SRR4302540.6444919/94‑1 (MQ=60)

                                                                                      GCCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAA        <  SRR4302540.9038485/94‑1 (MQ=60)

                                                                                       CCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAG       >  SRR4302540.8964066/1‑94 (MQ=60)

                                                                                       CCCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAG       <  SRR4302540.5069376/94‑1 (MQ=60)

                                                                                       CCCAGCGCCTTCATGGCGTTGGCAAACAGCATCACCCGGCCTGTGGCTAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAG       <  SRR4302540.3518931/94‑1 (MQ=60)

                                                                                        CCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCCCCTGCCCGACAAACGGCGCAAAAAGAATGTAAGC      <  SRR4302540.1123902/94‑1 (MQ=60)

                                                                                        CCAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGC      <  SRR4302540.5240768/94‑1 (MQ=60)

                                                                                         CAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCC     >  SRR4302540.5688928/1‑94 (MQ=60)

                                                                                         CAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA     >  SRR4302540.7325455/1‑94 (MQ=60)

                                                                                         CAGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCA     <  SRR4302540.5298451/94‑1 (MQ=60)

                                                                                          AGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCAC    >  SRR4302540.9502314/1‑94 (MQ=60)

                                                                                          AGCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCAC    <  SRR4302540.9725044/94‑1 (MQ=60)

                                                                                           GCGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCACC   <  SRR4302540.5854157/94‑1 (MQ=60)

                                                                                            CGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCACCT  >  SRR4302540.5683812/1‑94 (MQ=60)

                                                                                            CGGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCACCT  <  SRR4302540.6689527/94‑1 (MQ=60)

TATTTCGCCGGTGAATAGGCTGCAGCACCAACACCCACCAGCGTATAGCCGAGAAACGGATTGATACCAAAGCAGATACTGGCTGCGCCCAGCAGCTTCAGGCCGTTGGCAAACATCATCACCCGGCCTTTGGCGAAGCTATCCGCCACCTGCCCGACAAACGGCGCAAAAAGAATGTAAGCACCT  >  NC_000913/2971523‑2971708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`