Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
3,961,588 |
C→G |
R86T (AGG→ACG) |
gppA ← |
guanosine pentaphosphatase |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 3,961,588 | 0 | C | G | 100.0%
| 958.5
/ NA
| 296 | R86T (AGG→ACG) | gppA | guanosine pentaphosphatase |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (146/150); total (146/150) |
Only 100 of 299 total aligned reads displayed.
TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT > NC_000913/3961498‑3961677
|
tCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTc < 2:297798/93‑1 (MQ=255)
tctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGcc > 2:3271453/1‑93 (MQ=255)
tctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGcc > 1:1223080/1‑93 (MQ=255)
tctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGcc < 2:1528628/93‑1 (MQ=255)
ctTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCg < 2:353892/93‑1 (MQ=255)
ttCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGt < 1:506746/93‑1 (MQ=255)
ttCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGt > 1:1551842/1‑93 (MQ=255)
tCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTa < 2:3351277/93‑1 (MQ=255)
tCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTa < 1:5610834/93‑1 (MQ=255)
aCCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTatc > 2:5772719/1‑91 (MQ=255)
aCCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGc < 1:1025921/93‑1 (MQ=255)
aCCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGc > 2:4988642/1‑93 (MQ=255)
ccGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCg > 2:4183773/1‑93 (MQ=255)
ccGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCg > 1:3942134/1‑93 (MQ=255)
cTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACa > 2:5468516/1‑93 (MQ=255)
tGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACaa < 1:2306127/93‑1 (MQ=255)
tGATCACCTGTACCGGACAACCGAGAATTTCATGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACaa < 2:4409494/93‑1 (MQ=255)
gATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAc > 1:892581/1‑93 (MQ=255)
gATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAc < 1:1398441/93‑1 (MQ=255)
gATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAc > 1:770295/1‑93 (MQ=255)
cccTGTACCGGACAACCGAGAATGTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGa < 2:4897481/92‑1 (MQ=255)
cTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAt > 1:3476593/1‑93 (MQ=255)
tGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCGCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAtt < 2:2282738/93‑1 (MQ=255)
cgTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAtt < 2:5833201/92‑1 (MQ=255)
cGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCga < 2:2673954/93‑1 (MQ=255)
ggACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgag > 2:2168607/1‑93 (MQ=255)
gACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagg < 1:4899159/93‑1 (MQ=255)
gACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagg < 2:521566/93‑1 (MQ=255)
aCAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgaggg < 2:5652507/93‑1 (MQ=255)
cAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgaggga < 1:6013923/93‑1 (MQ=255)
aaCCGAGAATTACCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCATGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggag < 1:3383399/93‑1 (MQ=255)
aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg > 1:4740176/1‑93 (MQ=255)
aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg > 1:1062889/1‑93 (MQ=255)
aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg > 2:4496364/1‑93 (MQ=255)
aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg > 2:4763561/1‑93 (MQ=255)
aCCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCgagggagg < 1:1312966/93‑1 (MQ=255)
ccGAGAATTTCCTGCGCTTTGGCGATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGggagga < 1:5793298/93‑1 (MQ=255)
ccGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGggagga > 2:3384833/1‑93 (MQ=255)
cGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGaa > 2:3737498/1‑93 (MQ=255)
gagaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAat > 1:2984421/1‑93 (MQ=255)
agaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAata < 1:2215403/93‑1 (MQ=255)
agaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAata < 2:1040489/93‑1 (MQ=255)
agaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAata > 1:1261812/1‑93 (MQ=255)
gaATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAatat > 1:4354510/1‑93 (MQ=255)
aaTTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATc < 1:1955922/93‑1 (MQ=255)
aaTTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATc < 1:5921221/93‑1 (MQ=255)
aattCCCGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCt < 2:6285886/91‑1 (MQ=255)
aTTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCt < 1:2747541/93‑1 (MQ=255)
aTTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCt > 2:198652/1‑93 (MQ=255)
tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt < 1:2919646/93‑1 (MQ=255)
tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt < 1:2995844/93‑1 (MQ=255)
tttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCtt < 2:2899249/93‑1 (MQ=255)
ttCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTg < 2:1199237/93‑1 (MQ=255)
ccTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCa < 1:647437/93‑1 (MQ=255)
cTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAg < 1:5224338/93‑1 (MQ=255)
tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGa > 2:5582653/1‑93 (MQ=255)
tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGa < 1:1127509/93‑1 (MQ=255)
tGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGa < 2:6078206/93‑1 (MQ=255)
gcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGt < 2:234541/93‑1 (MQ=255)
gcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGt > 1:4333461/1‑93 (MQ=255)
gcTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGt < 2:3154759/93‑1 (MQ=255)
cTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGtt < 1:4033346/93‑1 (MQ=255)
tttGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTc < 2:1652106/93‑1 (MQ=255)
tttGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTc < 2:206926/93‑1 (MQ=255)
tGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAg < 1:1657579/93‑1 (MQ=255)
ggCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGc > 2:1304104/1‑93 (MQ=255)
gCAATAAAATCACCCGCATTAACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa > 2:2770607/1‑93 (MQ=255)
gCAATAAAATCACCCGCATGGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCa < 1:3536133/93‑1 (MQ=255)
cAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCaa > 2:3813722/1‑93 (MQ=255)
tAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGATCAGCAAACa > 2:4610204/1‑93 (MQ=255)
aaaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAg < 1:1240886/93‑1 (MQ=255)
aaaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAg < 2:4707840/93‑1 (MQ=255)
aaaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAgg > 1:3227633/1‑93 (MQ=255)
aaTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgc > 1:4134281/1‑93 (MQ=255)
aaTCACCCACATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgc > 2:6152803/1‑93 (MQ=255)
aTCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgcg > 2:1434422/1‑93 (MQ=255)
tCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGgcgc < 2:624048/93‑1 (MQ=255)
cccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa < 1:3681522/93‑1 (MQ=255)
cccGCATTGACGGCAAGGCGTAACGTCGCCGCAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCaaa > 1:6174711/1‑93 (MQ=255)
ccGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAc < 2:788504/93‑1 (MQ=255)
gCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAt > 1:2808152/1‑93 (MQ=255)
gCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAt < 2:902030/93‑1 (MQ=255)
cATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAtt > 1:3726684/1‑93 (MQ=255)
aTTGACGGCAAGGTGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTg < 1:3602025/93‑1 (MQ=255)
aTTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTg < 1:2115433/93‑1 (MQ=255)
ttGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGc > 2:5271400/1‑93 (MQ=255)
ttGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGc > 1:2472819/1‑93 (MQ=255)
gACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCa > 2:4118144/1‑93 (MQ=255)
cGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAc < 1:5529177/93‑1 (MQ=255)
gCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAccc > 1:4526028/1‑92 (MQ=255)
aaGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACcgcg > 1:2611813/1‑93 (MQ=255)
aGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCgcgc > 2:4353848/1‑93 (MQ=255)
ggCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCt < 1:5653751/93‑1 (MQ=255)
gCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTc < 1:5016678/93‑1 (MQ=255)
cGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTcc > 1:5881667/1‑93 (MQ=255)
tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGATGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTACAt > 2:540936/1‑93 (MQ=255)
tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt < 1:3767608/93‑1 (MQ=255)
tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt < 2:254453/93‑1 (MQ=255)
tAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAt > 1:5348477/1‑93 (MQ=255)
aaCGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAtt < 1:3855345/93‑1 (MQ=255)
|
TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT > NC_000913/3961498‑3961677
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT > NC_000913/3961495‑3961681
|
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG < SRR4302533.4666521/94‑1 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG < SRR4302533.1334535/94‑1 (MQ=60)
GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACG > SRR4302533.5207829/1‑94 (MQ=60)
CTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGT > SRR4302533.4884865/1‑94 (MQ=60)
TTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTC > SRR4302533.2418698/1‑94 (MQ=60)
TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCG < SRR4302533.687371/94‑1 (MQ=60)
TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCG > SRR4302533.4459206/1‑94 (MQ=60)
TCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCG < SRR4302533.124422/94‑1 (MQ=60)
CTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCC > SRR4302533.1230415/1‑94 (MQ=60)
CTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCC > SRR4302533.216719/1‑94 (MQ=60)
TCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCG > SRR4302533.3927714/1‑94 (MQ=60)
TCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCG < SRR4302533.5977016/94‑1 (MQ=60)
CTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGT > SRR4302533.1561185/1‑94 (MQ=60)
TTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTA < SRR4302533.509754/94‑1 (MQ=60)
TCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAG < SRR4302533.4664820/94‑1 (MQ=60)
TCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAG > SRR4302533.1559016/1‑94 (MQ=60)
TCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAG < SRR4302533.5644746/94‑1 (MQ=60)
ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG < SRR4302533.1031950/94‑1 (MQ=60)
ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG > SRR4302533.3756755/1‑94 (MQ=60)
ACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCG > SRR4302533.3966186/1‑94 (MQ=60)
GCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACA > SRR4302533.5365512/1‑94 (MQ=60)
GCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACA < SRR4302533.3747997/94‑1 (MQ=60)
CTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAA > SRR4302533.1739753/1‑94 (MQ=60)
TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC > SRR4302533.897827/1‑94 (MQ=60)
TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC < SRR4302533.2320415/94‑1 (MQ=60)
TGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAAC > SRR4302533.774828/1‑94 (MQ=60)
GATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACA < SRR4302533.1406869/94‑1 (MQ=60)
TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG < SRR4302533.5226298/94‑1 (MQ=60)
TCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACG > SRR4302533.2287268/1‑94 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA > SRR4302533.1047496/1‑94 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA < SRR4302533.2137296/94‑1 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA > SRR4302533.3009518/1‑94 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA > SRR4302533.567925/1‑94 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA < SRR4302533.3712636/94‑1 (MQ=60)
CACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGA < SRR4302533.1587197/94‑1 (MQ=60)
ACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAA > SRR4302533.3565356/1‑94 (MQ=60)
CCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAAT > SRR4302533.3498046/1‑94 (MQ=60)
TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT < SRR4302533.2767018/94‑1 (MQ=60)
TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT > SRR4302533.2729219/1‑94 (MQ=60)
TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT > SRR4302533.479887/1‑94 (MQ=60)
TGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTT < SRR4302533.438230/94‑1 (MQ=60)
GTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTG < SRR4302533.520495/94‑1 (MQ=60)
TACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGC > SRR4302533.3500943/1‑94 (MQ=60)
ACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCG < SRR4302533.3007362/94‑1 (MQ=60)
CCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGA < SRR4302533.3427720/94‑1 (MQ=60)
CCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGA > SRR4302533.5928061/1‑94 (MQ=60)
CCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGA < SRR4302533.4362661/94‑1 (MQ=60)
CGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAG < SRR4302533.3536776/94‑1 (MQ=60)
CGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAG > SRR4302533.3581344/1‑94 (MQ=60)
GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG > SRR4302533.3797572/1‑94 (MQ=60)
GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG < SRR4302533.5929703/94‑1 (MQ=60)
GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG < SRR4302533.5570060/94‑1 (MQ=60)
GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG < SRR4302533.2632596/94‑1 (MQ=60)
GGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGG > SRR4302533.6160139/1‑94 (MQ=60)
GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG > SRR4302533.5605137/1‑94 (MQ=60)
GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG < SRR4302533.1206582/94‑1 (MQ=60)
GACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGG < SRR4302533.4928843/94‑1 (MQ=60)
CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAG < SRR4302533.6050366/94‑1 (MQ=60)
CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAG < SRR4302533.11176/94‑1 (MQ=60)
CAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAG > SRR4302533.5680757/1‑94 (MQ=60)
AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG > SRR4302533.5524480/1‑94 (MQ=60)
AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG > SRR4302533.1069136/1‑94 (MQ=60)
AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG > SRR4302533.4768917/1‑94 (MQ=60)
AACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG < SRR4302533.2895744/94‑1 (MQ=60)
AACCGAGAATTACCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCATGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGG < SRR4302533.3404287/94‑1 (MQ=60)
ACCGAGAATTTCCTGCGCTTTGGCAATAAAATCGCCCGCATTGACGGCAAGGCGTAGCGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGA < SRR4302533.2429640/94‑1 (MQ=60)
ACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGA < SRR4302533.1320846/94‑1 (MQ=60)
ACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGA > SRR4302533.2280626/1‑94 (MQ=60)
CCGAGAATTTCCTGCGCTTTGGCGATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAA < SRR4302533.5828295/94‑1 (MQ=60)
CCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAA > SRR4302533.1277605/1‑94 (MQ=60)
CCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAA > SRR4302533.3627313/1‑94 (MQ=60)
CCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAA > SRR4302533.4063679/1‑94 (MQ=60)
CGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAAT > SRR4302533.3002677/1‑94 (MQ=60)
GAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA > SRR4302533.1269356/1‑94 (MQ=60)
GAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA < SRR4302533.123957/94‑1 (MQ=60)
GAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATA > SRR4302533.1798856/1‑94 (MQ=60)
AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT < SRR4302533.1333335/94‑1 (MQ=60)
AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT < SRR4302533.2229078/94‑1 (MQ=60)
AGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATAT > SRR4302533.4380793/1‑94 (MQ=60)
GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC > SRR4302533.1184218/1‑94 (MQ=60)
GAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATC < SRR4302533.1435482/94‑1 (MQ=60)
AATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCT < SRR4302533.5957014/94‑1 (MQ=60)
AATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCT < SRR4302533.1967838/94‑1 (MQ=60)
ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT < SRR4302533.2764383/94‑1 (MQ=60)
ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT > SRR4302533.4940336/1‑94 (MQ=60)
ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT > SRR4302533.819166/1‑94 (MQ=60)
ATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTT < SRR4302533.3413444/94‑1 (MQ=60)
TTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTG < SRR4302533.3014164/94‑1 (MQ=60)
TTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTG < SRR4302533.2937534/94‑1 (MQ=60)
TTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGC < SRR4302533.2025727/94‑1 (MQ=60)
TTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGC > SRR4302533.815942/1‑94 (MQ=60)
TTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGC > SRR4302533.5816385/1‑94 (MQ=60)
CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG < SRR4302533.651250/94‑1 (MQ=60)
CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG > SRR4302533.2415860/1‑94 (MQ=60)
CCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGGAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG < SRR4302533.4053172/94‑1 (MQ=60)
CCTGCGCTGTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAG < SRR4302533.5738432/94‑1 (MQ=60)
CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGA > SRR4302533.954609/1‑94 (MQ=60)
CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGA < SRR4302533.5255768/94‑1 (MQ=60)
CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGA < SRR4302533.3696287/94‑1 (MQ=60)
CTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGA > SRR4302533.162760/1‑94 (MQ=60)
TGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAC < SRR4302533.1253950/94‑1 (MQ=60)
TGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGAC < SRR4302533.1134207/94‑1 (MQ=60)
CGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGT > SRR4302533.4359572/1‑94 (MQ=60)
CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC > SRR4302533.3796081/1‑94 (MQ=60)
CTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTC < SRR4302533.4057897/94‑1 (MQ=60)
TTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAG > SRR4302533.417443/1‑94 (MQ=60)
TTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAG > SRR4302533.2770431/1‑94 (MQ=60)
TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGC < SRR4302533.5976158/94‑1 (MQ=60)
TGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGC < SRR4302533.1667610/94‑1 (MQ=60)
GCAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAA < SRR4302533.2963887/94‑1 (MQ=60)
GCAATAAAATCACCCGCATGGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAA < SRR4302533.3557926/94‑1 (MQ=60)
CAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAA < SRR4302533.5503801/94‑1 (MQ=60)
CAATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAA > SRR4302533.4570906/1‑94 (MQ=60)
AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAC < SRR4302533.95576/94‑1 (MQ=60)
AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAC > SRR4302533.2902598/1‑94 (MQ=60)
AATAAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAAC > SRR4302533.1290631/1‑94 (MQ=60)
AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG > SRR4302533.3247531/1‑94 (MQ=60)
AAAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGG < SRR4302533.1248300/94‑1 (MQ=60)
AAATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGC > SRR4302533.4159375/1‑94 (MQ=60)
AATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCG < SRR4302533.375505/94‑1 (MQ=60)
ATCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGC > SRR4302533.4177904/1‑94 (MQ=60)
TCACCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCA < SRR4302533.3377983/94‑1 (MQ=60)
CCCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA < SRR4302533.5067475/94‑1 (MQ=60)
ACCCGCATTGACGGCAAGGCGTAACGTCGCCGCAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAA > SRR4302533.6211816/1‑94 (MQ=60)
CCCGCATTGACGTCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAC < SRR4302533.1342676/94‑1 (MQ=60)
CCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCTAACAGGCGCAAAC < SRR4302533.2621593/94‑1 (MQ=60)
CCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAC > SRR4302533.1076776/1‑94 (MQ=60)
CCCGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAAC < SRR4302533.3704145/94‑1 (MQ=60)
CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT < SRR4302533.6225427/94‑1 (MQ=60)
CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT > SRR4302533.2825434/1‑94 (MQ=60)
CGCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACAT < SRR4302533.5362713/94‑1 (MQ=60)
GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT < SRR4302533.667011/94‑1 (MQ=60)
GCATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATT > SRR4302533.3749545/1‑94 (MQ=60)
CATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTG > SRR4302533.389854/1‑94 (MQ=60)
ATTGACGGCAAGGTGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC < SRR4302533.3624191/94‑1 (MQ=60)
ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC < SRR4302533.2128480/94‑1 (MQ=60)
ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC > SRR4302533.1263417/1‑94 (MQ=60)
ATTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGC > SRR4302533.2488067/1‑94 (MQ=60)
TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC < SRR4302533.5865015/94‑1 (MQ=60)
TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC < SRR4302533.2627029/94‑1 (MQ=60)
TTGACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCC > SRR4302533.5056341/1‑94 (MQ=60)
ACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAC > SRR4302533.6317060/1‑94 (MQ=60)
ACGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAAC < SRR4302533.5845785/94‑1 (MQ=60)
CGGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACC < SRR4302533.5562558/94‑1 (MQ=60)
GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCG > SRR4302533.4111856/1‑94 (MQ=60)
GGCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCC > SRR4302533.4553430/1‑94 (MQ=60)
GCAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGC > SRR4302533.4368337/1‑94 (MQ=60)
CAAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCG > SRR4302533.2627844/1‑94 (MQ=60)
AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC > SRR4302533.2966088/1‑94 (MQ=60)
AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC > SRR4302533.3130737/1‑94 (MQ=60)
AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC > SRR4302533.5024916/1‑94 (MQ=60)
AAGGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGC > SRR4302533.3378750/1‑94 (MQ=60)
GGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC > SRR4302533.4010531/1‑94 (MQ=60)
GGCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTC < SRR4302533.5687922/94‑1 (MQ=60)
GCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCC > SRR4302533.5917214/1‑94 (MQ=60)
GCGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCC < SRR4302533.5047070/94‑1 (MQ=60)
CGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA < SRR4302533.4921150/94‑1 (MQ=60)
CGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA < SRR4302533.2126549/94‑1 (MQ=60)
CGTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCA > SRR4302533.3093716/1‑94 (MQ=60)
GTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT > SRR4302533.5380565/1‑94 (MQ=60)
GTAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCAT > SRR4302533.6193477/1‑94 (MQ=60)
TAACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATT < SRR4302533.3790711/94‑1 (MQ=60)
AACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTG < SRR4302533.3878887/94‑1 (MQ=60)
ACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGC < SRR4302533.1801422/94‑1 (MQ=60)
ACGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGC > SRR4302533.3281912/1‑94 (MQ=60)
CGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT < SRR4302533.3495600/94‑1 (MQ=60)
CGTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCT < SRR4302533.3495599/94‑1 (MQ=60)
GTCGCCGTAGCGACAACACGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT > SRR4302533.3228920/1‑94 (MQ=60)
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GCTTCCTCTTCACCGCTGATCACCTGTACCGGACAACCGAGAATTTCCTGCGCTTTGGCAATAAAATCACCCGCATTGACGGCAAGGCGTAACCTCGCCGTAGCGACAACGCGAATTTGCGAGGGAGGAATATCTTGCAGACGTTCAGCAAACAGGCGCAAACATTGCCAACCGCGCTCCATTGCTT > NC_000913/3961495‑3961681
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |