Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,313 |
Δ1 bp |
intergenic (+173/‑901) |
wzxE → / → wecF |
putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,310 | 0 | C | . | 97.3%
| 990.7
/ 16.4
| 223 | intergenic (+170/‑904) | wzxE/wecF | putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (99/118); minor base T (2/4); total (101/122) |
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 |
Only 100 of 250 total aligned reads displayed.
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
gCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTc < 2:4494461/93‑1 (MQ=255)
gCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTc < 1:1578592/93‑1 (MQ=255)
cgcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccc > 2:2868676/1‑93 (MQ=255)
gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct < 1:1002094/93‑2 (MQ=255)
gcgACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccct < 1:982233/93‑2 (MQ=255)
cgacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctg > 1:1083525/1‑91 (MQ=255)
cgacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctg > 1:4844425/1‑91 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg < 1:693326/93‑4 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg > 2:5913784/1‑90 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg > 1:4571394/1‑90 (MQ=255)
gacgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctgg > 2:5358274/1‑90 (MQ=255)
acgaGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTccctggg < 1:3681530/93‑5 (MQ=255)
gagcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaa > 2:3749075/1‑93 (MQ=255)
gcgagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaa > 1:125463/1‑93 (MQ=255)
gagcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGaaaaaa > 1:3021010/1‑93 (MQ=255)
agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑TCCTGGGAAAAAAt > 2:4603461/1‑93 (MQ=255)
agcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAAt > 2:5243994/1‑93 (MQ=255)
gcACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATc < 1:2032656/93‑1 (MQ=255)
cACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCg > 1:270042/1‑93 (MQ=255)
aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGc < 2:2717297/93‑1 (MQ=255)
aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGc < 1:3265671/93‑1 (MQ=255)
aCGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGc > 1:2195522/1‑93 (MQ=255)
cgcgcgggAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt < 2:1856132/93‑1 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt < 1:5052865/93‑1 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt < 2:5453920/93‑1 (MQ=255)
cgcgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCt < 2:2237215/93‑1 (MQ=255)
cgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTgg < 1:3122126/93‑1 (MQ=255)
cgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTgg > 1:2599131/1‑93 (MQ=255)
cgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTgg > 1:3813802/1‑93 (MQ=255)
cgcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTgg > 2:1083072/1‑93 (MQ=255)
gcgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGc < 1:4428709/93‑1 (MQ=255)
cgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCg < 2:5976502/93‑1 (MQ=255)
cgcgAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCg > 2:3959350/1‑93 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa < 2:2067296/93‑1 (MQ=255)
gAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGaa < 1:1501589/93‑1 (MQ=255)
gTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGc > 1:5265404/1‑93 (MQ=255)
tttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCg > 1:4265977/1‑93 (MQ=255)
tttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCg > 1:470779/1‑93 (MQ=255)
ttATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCgg > 2:1786188/1‑93 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt > 2:392326/1‑93 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt > 1:772584/1‑93 (MQ=255)
tATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGt > 2:6048665/1‑93 (MQ=255)
tGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCa < 2:4293131/93‑1 (MQ=255)
gttgttGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATc > 1:2755777/1‑93 (MQ=255)
tgttgGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATcgc < 1:1466895/93‑1 (MQ=255)
tgGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaa < 2:3579378/93‑1 (MQ=255)
ggCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGaaa < 1:1360989/93‑1 (MQ=255)
gacgacGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCaaaa < 1:2821637/93‑1 (MQ=255)
cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc < 2:5263382/93‑1 (MQ=255)
cgacgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGc < 2:3016956/93‑1 (MQ=255)
acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa < 2:4990307/93‑1 (MQ=255)
acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa < 1:3914937/93‑1 (MQ=255)
acgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTa > 2:3395450/1‑93 (MQ=255)
cgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTaa < 1:5776661/93‑1 (MQ=255)
cgGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTaa < 2:220344/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc < 1:4451117/93‑1 (MQ=255)
ggCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAc < 2:1611995/93‑1 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc > 1:5595672/1‑93 (MQ=255)
gCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAcc > 1:2437123/1‑93 (MQ=255)
ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 1:3195718/93‑1 (MQ=255)
ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 2:5124942/93‑1 (MQ=255)
ttAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATGTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGt < 2:352514/93‑1 (MQ=255)
tAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTc > 2:779805/1‑93 (MQ=255)
aaGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTca < 1:3414707/93‑1 (MQ=255)
gTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagc > 2:522814/1‑93 (MQ=255)
tGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagca < 1:1768561/93‑1 (MQ=255)
tGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagca < 2:1373784/93‑1 (MQ=255)
gATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTcagcag < 1:6200734/93‑1 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt < 2:869638/93‑1 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt < 2:5794596/93‑1 (MQ=255)
aGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGt < 1:3495381/93‑1 (MQ=255)
gCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtt > 1:42928/1‑93 (MQ=255)
gCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGAGtt > 2:314177/1‑93 (MQ=255)
tGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtttt < 2:150244/93‑1 (MQ=255)
gTCCGGCGCTTTCAGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGttttt > 2:6192691/1‑93 (MQ=255)
tCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGtttttt > 1:1637686/1‑93 (MQ=255)
ccGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttc < 2:2465627/93‑1 (MQ=255)
cGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttct < 1:1993472/93‑1 (MQ=255)
ggCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttctt < 2:4432520/93‑1 (MQ=255)
ggCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttctt > 1:4101766/1‑93 (MQ=255)
gcgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTttcttc > 1:401316/1‑93 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 1:848593/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc < 2:3334882/93‑1 (MQ=255)
cgcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTcc > 2:4819469/1‑93 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 2:2492420/93‑1 (MQ=255)
gcTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCa < 1:1916980/93‑1 (MQ=255)
cTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAc < 2:408873/93‑1 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg < 2:1515833/93‑1 (MQ=255)
tttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACg < 2:4813838/93‑1 (MQ=255)
ttCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACgg < 2:1680006/93‑1 (MQ=255)
tCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGt > 1:2298004/1‑93 (MQ=255)
tCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGt > 2:3349325/1‑93 (MQ=255)
cTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTc < 1:3749075/93‑1 (MQ=255)
cTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTc > 1:4875810/1‑93 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa > 2:1221351/1‑93 (MQ=255)
tgtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCa < 2:1979843/93‑1 (MQ=255)
gtgCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAg < 1:1789333/93‑1 (MQ=255)
attttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCaa < 1:5208923/92‑1 (MQ=255)
ttttTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAt < 1:4823556/93‑1 (MQ=255)
ttttCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATc < 2:4646168/93‑1 (MQ=255)
|
GCCGCGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > NC_000913/3975218‑3975399
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > NC_000913/3975222‑3975405
|
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG < SRR4302533.3801796/94‑1 (MQ=60)
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG > SRR4302533.4599098/1‑94 (MQ=60)
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG > SRR4302533.2663167/1‑94 (MQ=60)
CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGG < SRR4302533.4093945/94‑1 (MQ=60)
GACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGG < SRR4302533.697422/94‑1 (MQ=60)
ACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGA < SRR4302533.3704153/94‑1 (MQ=60)
AGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAA > SRR4302533.788080/1‑94 (MQ=60)
AGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAA > SRR4302533.126248/1‑94 (MQ=60)
CGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAA > SRR4302533.3039498/1‑94 (MQ=60)
GAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAACAT > SRR4302533.4942317/1‑94 (MQ=60)
AGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATC < SRR4302533.1604405/94‑1 (MQ=60)
GCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCG < SRR4302533.2045197/94‑1 (MQ=60)
GCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCG > SRR4302533.271682/1‑94 (MQ=60)
CACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGC > SRR4302533.2209051/1‑94 (MQ=60)
CACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGC < SRR4302533.4339656/94‑1 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCT < SRR4302533.893316/94‑1 (MQ=60)
ACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCT < SRR4302533.3285823/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302533.5083415/94‑1 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG > SRR4302533.485425/1‑94 (MQ=60)
CGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTG < SRR4302533.3480343/94‑1 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG > SRR4302533.3837125/1‑94 (MQ=60)
GCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGG > SRR4302533.2615106/1‑94 (MQ=60)
CGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGC < SRR4302533.3201096/94‑1 (MQ=60)
CGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGC < SRR4302533.341435/94‑1 (MQ=60)
CGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGC < SRR4302533.3141321/94‑1 (MQ=60)
GCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG < SRR4302533.4455481/94‑1 (MQ=60)
GCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG > SRR4302533.103683/1‑94 (MQ=60)
GCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG > SRR4302533.4722552/1‑94 (MQ=60)
GCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCG < SRR4302533.3373332/94‑1 (MQ=60)
CGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGG > SRR4302533.1954964/1‑94 (MQ=60)
CGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGG > SRR4302533.1718943/1‑94 (MQ=60)
CGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGG > SRR4302533.1579236/1‑94 (MQ=60)
GCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGA < SRR4302533.115548/94‑1 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG < SRR4302533.5456154/94‑1 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG < SRR4302533.1510640/94‑1 (MQ=60)
GAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAG > SRR4302533.1795732/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGG > SRR4302533.1903415/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC > SRR4302533.2265698/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC > SRR4302533.5297003/1‑94 (MQ=60)
AGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGC > SRR4302533.701820/1‑94 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG > SRR4302533.4291666/1‑94 (MQ=60)
GTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCG > SRR4302533.473592/1‑94 (MQ=60)
TTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGT > SRR4302533.777128/1‑94 (MQ=60)
TTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGT > SRR4302533.1509739/1‑94 (MQ=60)
ATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCA > SRR4302533.5902816/1‑94 (MQ=60)
TGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCAT > SRR4302533.3993941/1‑94 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC > SRR4302533.2772678/1‑94 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC < SRR4302533.2607822/94‑1 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC < SRR4302533.2882083/94‑1 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC < SRR4302533.615755/94‑1 (MQ=60)
GGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATC < SRR4302533.1389356/94‑1 (MQ=60)
TTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGC < SRR4302533.1686606/94‑1 (MQ=60)
TGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCG < SRR4302533.5632110/94‑1 (MQ=60)
TGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCG < SRR4302533.1475740/94‑1 (MQ=60)
TTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAA < SRR4302533.3049800/94‑1 (MQ=60)
TGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAA > SRR4302533.1295694/1‑94 (MQ=60)
GGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAG < SRR4302533.4217396/94‑1 (MQ=60)
GGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAG < SRR4302533.4456013/94‑1 (MQ=60)
GGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAG < SRR4302533.1369165/94‑1 (MQ=60)
GACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAG < SRR4302533.2839003/94‑1 (MQ=60)
CGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCT > SRR4302533.4298554/1‑94 (MQ=60)
CGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCT > SRR4302533.3788375/1‑94 (MQ=60)
GACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTA > SRR4302533.6265793/1‑94 (MQ=60)
ACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAA > SRR4302533.203564/1‑94 (MQ=60)
ACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAA < SRR4302533.3938852/94‑1 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC > SRR4302533.4222298/1‑94 (MQ=60)
CGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAAC < SRR4302533.5811550/94‑1 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302533.4478029/94‑1 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC > SRR4302533.5629484/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC > SRR4302533.3543012/1‑94 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC < SRR4302533.2737410/94‑1 (MQ=60)
GGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACC > SRR4302533.2452170/1‑94 (MQ=60)
CTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGT > SRR4302533.3856127/1‑94 (MQ=60)
CTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGT > SRR4302533.2571485/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAACGCAAAAGCTAACCGTC > SRR4302533.1165780/1‑94 (MQ=60)
TTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTC < SRR4302533.3215382/94‑1 (MQ=60)
TAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCA < SRR4302533.3685443/94‑1 (MQ=60)
AAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAG < SRR4302533.3435804/94‑1 (MQ=60)
AAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAG < SRR4302533.4425429/94‑1 (MQ=60)
GTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCA < SRR4302533.918315/94‑1 (MQ=60)
GTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCA < SRR4302533.2254980/94‑1 (MQ=60)
TGATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAG < SRR4302533.1779330/94‑1 (MQ=60)
GATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGC < SRR4302533.6237926/94‑1 (MQ=60)
GATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGC < SRR4302533.21169/94‑1 (MQ=60)
ATAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCG < SRR4302533.4578361/94‑1 (MQ=60)
TAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGT < SRR4302533.544566/94‑1 (MQ=60)
TAGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGT < SRR4302533.3980991/94‑1 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT > SRR4302533.43220/1‑94 (MQ=60)
AGCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTT < SRR4302533.3516939/94‑1 (MQ=60)
GCTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTT > SRR4302533.4876183/1‑94 (MQ=60)
CTGTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTT > SRR4302533.1577437/1‑94 (MQ=60)
GTCCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTT > SRR4302533.1647601/1‑94 (MQ=60)
CCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCT > SRR4302533.1396470/1‑94 (MQ=60)
CCGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCT < SRR4302533.728438/94‑1 (MQ=60)
CGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTT > SRR4302533.3224558/1‑94 (MQ=60)
CGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTT < SRR4302533.2005701/94‑1 (MQ=60)
CGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTT > SRR4302533.4126725/1‑94 (MQ=60)
CGGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTT > SRR4302533.2851620/1‑94 (MQ=60)
GGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTC < SRR4302533.314827/94‑1 (MQ=60)
GGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTC < SRR4302533.5116069/94‑1 (MQ=60)
GGCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTC > SRR4302533.403738/1‑94 (MQ=60)
GCGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCC > SRR4302533.4765424/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302533.853561/94‑1 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA > SRR4302533.282286/1‑94 (MQ=60)
CGCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCA < SRR4302533.1857149/94‑1 (MQ=60)
GCTTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCAC < SRR4302533.1928682/94‑1 (MQ=60)
TTTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGG > SRR4302533.238408/1‑94 (MQ=60)
TTCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGT > SRR4302533.2312257/1‑94 (MQ=60)
TCTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTC > SRR4302533.4905351/1‑94 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA < SRR4302533.3718750/94‑1 (MQ=60)
CTGTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCA < SRR4302533.3772059/94‑1 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT > SRR4302533.4530442/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT > SRR4302533.2015438/1‑94 (MQ=60)
GTGCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGT < SRR4302533.1800214/94‑1 (MQ=60)
GCAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTC < SRR4302533.4880519/94‑1 (MQ=60)
CAATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCA > SRR4302533.5173980/1‑94 (MQ=60)
AATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGCTCAGTTCAA > SRR4302533.4781821/1‑94 (MQ=60)
ATTTTT‑CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAAT < SRR4302533.5240300/94‑1 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > SRR4302533.526161/1‑94 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC < SRR4302533.4852777/94‑1 (MQ=60)
TTTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATC > SRR4302533.2764953/1‑94 (MQ=60)
TTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCC > SRR4302533.1529774/1‑94 (MQ=60)
TTTTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATAC > SRR4302533.5737515/1‑94 (MQ=60)
TTCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCA < SRR4302533.3468821/94‑1 (MQ=60)
TCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCAC > SRR4302533.2002349/1‑94 (MQ=60)
CCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACA > SRR4302533.1169728/1‑94 (MQ=60)
CCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > SRR4302533.479277/1‑94 (MQ=60)
CCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > SRR4302533.838591/1‑94 (MQ=60)
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CGACGAGCGAGCACGCGCGCGAGTTTATGGTTGTTGGCAAGGACGACGGCTTAAGTGATAGCTGTCCGGCGCTTTCTGTGCAATTTTTCCCCTGGGAAAAAATCGCTGGCGGAAGCGGTCATCGCGAAAGCAAAAGCTAACCGTCAGCAGCGTTTTTTCTTCCACGGTCAGTTCAATCCCACAC > NC_000913/3975222‑3975405
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
