Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,977,366 |
A→G |
S385G (AGT→GGT) |
wecF → |
TDP‑Fuc4NAc:lipidII transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,977,366 | 0 | A | G | 100.0%
| 701.7
/ NA
| 216 | S385G (AGT→GGT) | wecF | TDP‑Fuc4NAc:lipidII transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (107/109); total (107/109) |
Only 100 of 219 total aligned reads displayed.
ATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTG > NC_000913/3977276‑3977455
|
aTCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGt < 2:4332752/93‑1 (MQ=255)
tCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGtt < 2:683146/93‑1 (MQ=255)
gTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTc > 2:2646002/1‑93 (MQ=255)
gTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTc < 1:796206/93‑1 (MQ=255)
gTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTc < 1:5520013/93‑1 (MQ=255)
tagttggtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCt < 2:5828379/91‑1 (MQ=255)
ggttggtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTg > 1:1095194/1‑93 (MQ=255)
ttggtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCt < 1:6247871/93‑1 (MQ=255)
tggtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCtt > 2:2896396/1‑93 (MQ=255)
ggtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCttt < 1:2546566/93‑1 (MQ=255)
gtCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTg < 2:5099081/93‑1 (MQ=255)
tCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTgg < 2:5594751/93‑1 (MQ=255)
ttGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGACCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTggg < 2:697328/92‑1 (MQ=255)
cTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTggg < 2:2311208/93‑1 (MQ=255)
cTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTggg > 1:1883627/1‑93 (MQ=255)
tGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTgggg < 2:107488/93‑1 (MQ=255)
gATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGc > 1:1969593/1‑93 (MQ=255)
gATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGc > 2:1243522/1‑93 (MQ=255)
gATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGc > 2:5018915/1‑93 (MQ=255)
gATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGc > 2:3010638/1‑93 (MQ=255)
atcatcAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCg > 1:5485088/1‑93 (MQ=255)
atcatcAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCg > 1:4222077/1‑93 (MQ=255)
catcaAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGAt < 1:3134484/93‑1 (MQ=255)
atcaAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATc > 1:2273561/1‑93 (MQ=255)
atcaAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATc > 2:3469780/1‑93 (MQ=255)
tcaAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCt < 2:4565579/93‑1 (MQ=255)
acaAATGGTTCGACTGGCTGTATGAGCTGGGCAGCCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCGCGGTTTCTGCTTTGGGGCGATCt < 2:4605311/92‑1 (MQ=255)
caAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCtt > 1:4869686/1‑93 (MQ=255)
caAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCtt > 2:5905881/1‑93 (MQ=255)
aaTGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCa > 2:1376363/1‑93 (MQ=255)
tGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAat > 2:2917115/1‑93 (MQ=255)
tGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAat > 2:5438424/1‑93 (MQ=255)
tGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAat < 2:573825/93‑1 (MQ=255)
gTTCGTCTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAatat < 1:2756635/93‑1 (MQ=255)
gTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAatat < 2:118752/93‑1 (MQ=255)
tCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGa < 2:3721465/93‑1 (MQ=255)
cGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGAt < 1:1824788/93‑1 (MQ=255)
cGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGAt < 2:5213762/93‑1 (MQ=255)
gACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATc > 2:4856147/1‑93 (MQ=255)
cTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGt < 1:1048467/93‑1 (MQ=255)
tGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTg < 2:571201/93‑1 (MQ=255)
tGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTg > 2:4076806/1‑93 (MQ=255)
cTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTg < 2:6108638/93‑1 (MQ=255)
cTGTATGAGCGGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTg < 1:3237612/93‑1 (MQ=255)
tGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTgg < 1:4320202/93‑1 (MQ=255)
tGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTgg > 1:3938032/1‑93 (MQ=255)
tGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTgg > 2:3823258/1‑93 (MQ=255)
tGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTgg > 1:3514358/1‑93 (MQ=255)
gTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgc > 1:4258113/1‑93 (MQ=255)
gTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgc > 2:1658509/1‑93 (MQ=255)
gTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgc > 1:3216543/1‑93 (MQ=255)
tATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgcg > 1:6256856/1‑93 (MQ=255)
tATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgcg > 2:3226842/1‑93 (MQ=255)
aTGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGgcgc < 1:694448/93‑1 (MQ=255)
gCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGa < 1:4009203/93‑1 (MQ=255)
gCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGa < 1:1108677/93‑1 (MQ=255)
tGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAg < 1:3672751/93‑1 (MQ=255)
tGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAg > 1:4480999/1‑93 (MQ=255)
gggCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAgg < 1:328989/93‑1 (MQ=255)
gggCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAgg > 2:355212/1‑93 (MQ=255)
gggCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAgg > 1:4760081/1‑93 (MQ=255)
ggCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAggg < 1:4165279/93‑1 (MQ=255)
aCCGCTATCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTgg < 1:524322/93‑1 (MQ=255)
aCCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTgg > 1:2669911/1‑93 (MQ=255)
ccGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGa < 2:179407/93‑1 (MQ=255)
gAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCg > 2:1257108/1‑93 (MQ=255)
aGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGt > 1:5116673/1‑93 (MQ=255)
gCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGtt < 1:2585410/93‑1 (MQ=255)
gCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGtt < 1:51276/93‑1 (MQ=255)
acgtAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGtt < 1:4933309/90‑1 (MQ=255)
ccTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGttt > 1:5717800/1‑93 (MQ=255)
cTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTg > 2:5978057/1‑93 (MQ=255)
cTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTg > 2:1806938/1‑93 (MQ=255)
tAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGt < 2:2393095/93‑1 (MQ=255)
tAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGt > 1:1181663/1‑93 (MQ=255)
aaTCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGtc < 1:4626039/93‑1 (MQ=255)
aTCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGtct > 2:2090899/1‑93 (MQ=255)
gCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAc > 2:4481837/1‑93 (MQ=255)
gCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAc > 1:3596608/1‑93 (MQ=255)
gCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAc > 1:2969081/1‑93 (MQ=255)
cTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAcg < 1:5872376/93‑1 (MQ=255)
ataAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAcgcg > 1:3681439/1‑93 (MQ=255)
ataAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAcgcg > 1:2335544/1‑93 (MQ=255)
taAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGt > 1:5999416/1‑93 (MQ=255)
aaaGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTg > 2:1864153/1‑93 (MQ=255)
aaGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTgg > 1:758854/1‑93 (MQ=255)
aGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGCTTCGTTTTTCTCACGCGTGGt > 2:5308833/1‑93 (MQ=255)
gCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGtt > 1:503250/1‑92 (MQ=255)
gCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTc > 1:6090775/1‑93 (MQ=255)
tGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCtt > 2:5622325/1‑93 (MQ=255)
gCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCttt < 2:3036530/93‑1 (MQ=255)
gATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCttttt > 2:1922428/1‑93 (MQ=255)
gATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCttttt > 1:1215062/1‑93 (MQ=255)
atatTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCtttttt > 1:3824429/1‑93 (MQ=255)
atatTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCtttttt > 1:1486864/1‑93 (MQ=255)
tatTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCttttttt > 2:1055004/1‑92 (MQ=255)
tatTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTa > 2:4378687/1‑93 (MQ=255)
tatTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTa < 2:151900/93‑1 (MQ=255)
ttGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATc > 1:1233141/1‑93 (MQ=255)
gCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGt < 1:6140145/93‑1 (MQ=255)
|
ATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTG > NC_000913/3977276‑3977455
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTC > NC_000913/3977273‑3977458
|
GCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACG < SRR4302533.515352/94‑1 (MQ=60)
GCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACG < SRR4302533.3145808/94‑1 (MQ=60)
GCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACG < SRR4302533.1414992/94‑1 (MQ=60)
CGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGG < SRR4302533.3020254/94‑1 (MQ=60)
CGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGG > SRR4302533.5547655/1‑94 (MQ=60)
GATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGT < SRR4302533.1571034/94‑1 (MQ=60)
CGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTC > SRR4302533.402277/1‑94 (MQ=60)
GTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCT < SRR4302533.627151/94‑1 (MQ=60)
GTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCT < SRR4302533.5553344/94‑1 (MQ=60)
GTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCT < SRR4302533.800888/94‑1 (MQ=60)
GTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCT > SRR4302533.116428/1‑94 (MQ=60)
TGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTG > SRR4302533.1101676/1‑94 (MQ=60)
TGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTG < SRR4302533.607261/94‑1 (MQ=60)
GTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCT < SRR4302533.5229176/94‑1 (MQ=60)
GTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCT < SRR4302533.4827633/94‑1 (MQ=60)
TTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTT < SRR4302533.6285259/94‑1 (MQ=60)
TGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTT < SRR4302533.70058/94‑1 (MQ=60)
GGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTG < SRR4302533.2562234/94‑1 (MQ=60)
TCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGG > SRR4302533.1895130/1‑94 (MQ=60)
CTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGG < SRR4302533.5154316/94‑1 (MQ=60)
CTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGG > SRR4302533.2782504/1‑94 (MQ=60)
CTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGG > SRR4302533.3771677/1‑94 (MQ=60)
CTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGG < SRR4302533.4734653/94‑1 (MQ=60)
TGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGC > SRR4302533.1981639/1‑94 (MQ=60)
GATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCG > SRR4302533.181394/1‑94 (MQ=60)
GATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCG > SRR4302533.4247606/1‑94 (MQ=60)
GATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCG > SRR4302533.5518148/1‑94 (MQ=60)
CATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATC < SRR4302533.3153758/94‑1 (MQ=60)
CATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATC > SRR4302533.2287633/1‑94 (MQ=60)
TCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTT > SRR4302533.4899193/1‑94 (MQ=60)
CAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTC < SRR4302533.4647409/94‑1 (MQ=60)
ATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAAT > SRR4302533.939905/1‑94 (MQ=60)
GGGTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATAT < SRR4302533.1432537/94‑1 (MQ=60)
GTTCGTCTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATG < SRR4302533.2773540/94‑1 (MQ=60)
GTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATG > SRR4302533.3563589/1‑94 (MQ=60)
TTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGA < SRR4302533.1209664/94‑1 (MQ=60)
TTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGA < SRR4302533.1967882/94‑1 (MQ=60)
TCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGAT < SRR4302533.2376651/94‑1 (MQ=60)
CGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATC < SRR4302533.1835935/94‑1 (MQ=60)
CGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATC < SRR4302533.5936993/94‑1 (MQ=60)
CGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATC > SRR4302533.5584727/1‑94 (MQ=60)
GACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCG > SRR4302533.2979511/1‑94 (MQ=60)
CTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTG > SRR4302533.2293743/1‑94 (MQ=60)
CTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTG < SRR4302533.1054629/94‑1 (MQ=60)
CTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTG < SRR4302533.3229079/94‑1 (MQ=60)
CTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTG > SRR4302533.4965611/1‑94 (MQ=60)
GCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTG > SRR4302533.4255204/1‑94 (MQ=60)
CTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGG > SRR4302533.3962069/1‑94 (MQ=60)
CTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGG > SRR4302533.3536020/1‑94 (MQ=60)
CTGTATGAGCGGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGG < SRR4302533.3257562/94‑1 (MQ=60)
TGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGC < SRR4302533.4346222/94‑1 (MQ=60)
TGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGC > SRR4302533.2640668/1‑94 (MQ=60)
TGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGC > SRR4302533.4283780/1‑94 (MQ=60)
TGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGC > SRR4302533.3236375/1‑94 (MQ=60)
GTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCG > SRR4302533.4983518/1‑94 (MQ=60)
GTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCG > SRR4302533.5520060/1‑94 (MQ=60)
GTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCG > SRR4302533.6294274/1‑94 (MQ=60)
ATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCG < SRR4302533.6142673/94‑1 (MQ=60)
ATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCG < SRR4302533.698554/94‑1 (MQ=60)
GAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTG > SRR4302533.1419452/1‑94 (MQ=60)
GCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAA < SRR4302533.1115258/94‑1 (MQ=60)
GCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAA < SRR4302533.4033614/94‑1 (MQ=60)
GTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAG < SRR4302533.4205301/94‑1 (MQ=60)
CTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAG > SRR4302533.4508109/1‑94 (MQ=60)
CTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAG < SRR4302533.813874/94‑1 (MQ=60)
TGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGG < SRR4302533.3695322/94‑1 (MQ=60)
TGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGG > SRR4302533.4788958/1‑94 (MQ=60)
TGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGG < SRR4302533.4121215/94‑1 (MQ=60)
GGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGG < SRR4302533.6291418/94‑1 (MQ=60)
GGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGG < SRR4302533.330995/94‑1 (MQ=60)
GGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGC < SRR4302533.4190517/94‑1 (MQ=60)
GAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTG < SRR4302533.5303726/94‑1 (MQ=60)
CAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTG > SRR4302533.4381120/1‑94 (MQ=60)
CAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTG < SRR4302533.1099201/94‑1 (MQ=60)
AACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGG > SRR4302533.5608817/1‑94 (MQ=60)
AACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGG > SRR4302533.2686289/1‑94 (MQ=60)
ACCGCTATCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGA < SRR4302533.527430/94‑1 (MQ=60)
GAGCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGT > SRR4302533.5147596/1‑94 (MQ=60)
acgTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTT < SRR4302533.4963180/91‑1 (MQ=60)
GCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTT > SRR4302533.5752331/1‑94 (MQ=60)
GCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTT < SRR4302533.2589980/94‑1 (MQ=60)
GCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTT < SRR4302533.51624/94‑1 (MQ=60)
GCCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTT < SRR4302533.2601306/94‑1 (MQ=60)
CCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTG > SRR4302533.5754624/1‑94 (MQ=60)
CCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTG > SRR4302533.3659753/1‑94 (MQ=60)
CCTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGCTTG > SRR4302533.1228827/1‑94 (MQ=60)
CTAATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGT > SRR4302533.1188762/1‑94 (MQ=60)
AATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCT < SRR4302533.4654076/94‑1 (MQ=60)
ATCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTC > SRR4302533.3858240/1‑94 (MQ=60)
TCGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCA < SRR4302533.3278965/94‑1 (MQ=60)
CGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAC > SRR4302533.2987235/1‑94 (MQ=60)
CGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAC > SRR4302533.3618739/1‑94 (MQ=60)
CGCTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCAC > SRR4302533.765329/1‑94 (MQ=60)
CTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGC < SRR4302533.3320308/94‑1 (MQ=60)
CTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGC > SRR4302533.1103623/1‑94 (MQ=60)
CTATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGC < SRR4302533.5907872/94‑1 (MQ=60)
TATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCG > SRR4302533.2350000/1‑94 (MQ=60)
TATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCG > SRR4302533.3704062/1‑94 (MQ=60)
ATAAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGT > SRR4302533.6035753/1‑94 (MQ=60)
AAAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGG > SRR4302533.763322/1‑94 (MQ=60)
AAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTGAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGT < SRR4302533.3252321/94‑1 (MQ=60)
AAGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGT < SRR4302533.2291979/94‑1 (MQ=60)
AGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTT > SRR4302533.506239/1‑94 (MQ=60)
AGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTC > SRR4302533.6264293/1‑94 (MQ=60)
AGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTC > SRR4302533.6127588/1‑94 (MQ=60)
AGCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTC < SRR4302533.2993295/94‑1 (MQ=60)
GCTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCT > SRR4302533.3700453/1‑94 (MQ=60)
CTGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTT > SRR4302533.2196936/1‑94 (MQ=60)
TGCGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTT < SRR4302533.3598680/94‑1 (MQ=60)
CGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTT > SRR4302533.1222359/1‑94 (MQ=60)
CGATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTT < SRR4302533.4319841/94‑1 (MQ=60)
GATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTT > SRR4302533.3847812/1‑94 (MQ=60)
GATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTT > SRR4302533.4373153/1‑94 (MQ=60)
GATATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTT > SRR4302533.1495833/1‑94 (MQ=60)
ATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGTCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATC < SRR4302533.4018184/94‑1 (MQ=60)
ATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATC < SRR4302533.2741227/94‑1 (MQ=60)
ATTGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATC > SRR4302533.1240519/1‑94 (MQ=60)
TGCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGT > SRR4302533.5071815/1‑94 (MQ=60)
GCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTG < SRR4302533.6177127/94‑1 (MQ=60)
GCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTG < SRR4302533.4916866/94‑1 (MQ=60)
GCACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTG > SRR4302533.1862246/1‑94 (MQ=60)
CACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGG > SRR4302533.585482/1‑94 (MQ=60)
CACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGG > SRR4302533.236036/1‑94 (MQ=60)
ACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGT > SRR4302533.4049820/1‑94 (MQ=60)
ACGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGT > SRR4302533.1805790/1‑94 (MQ=60)
CGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTT > SRR4302533.1315346/1‑94 (MQ=60)
CGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTC > SRR4302533.70148/1‑94 (MQ=60)
CGGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTC > SRR4302533.962560/1‑94 (MQ=60)
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GCGATCGTGGTTGGTCTGATCATCAAATGGTTCGACTGGCTGTATGAGCTGGGCAACCGCGAGCCTAATCGCTATAAAGCTGCGATATTGCACAGTTTCTGCTTTGGGGCGATCTTCAATATGATCGTGCTGGCGCGTGAAGGGCTGGATTCGTTTGTCTCACGCGTGGTCTTTTTTATCGTGGTC > NC_000913/3977273‑3977458
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
