Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,980,954 |
A→G |
L128L (TTA→TTG) |
aslB → |
putative arylsulfatase regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,980,954 | 0 | A | G | 100.0%
| 808.4
/ NA
| 254 | L128L (TTA→TTG) | aslB | putative arylsulfatase regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (116/138); total (116/138) |
Only 100 of 258 total aligned reads displayed.
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC > NC_000913/3980864‑3981043
|
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc < 1:1431938/93‑1 (MQ=255)
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc > 2:4577285/1‑93 (MQ=255)
gAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTc < 1:3901875/93‑1 (MQ=255)
aggtAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGc > 2:5488419/4‑93 (MQ=255)
gATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCt < 2:2839570/93‑1 (MQ=255)
gATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCt < 1:869082/93‑1 (MQ=255)
aTAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTg < 1:4053758/93‑1 (MQ=255)
tAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTgg < 2:3089222/93‑1 (MQ=255)
aaGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGa < 1:105215/93‑1 (MQ=255)
aGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCACTTTCTTGTTGGTTTGTCGCTGGAt < 2:6072648/93‑1 (MQ=255)
gTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATg < 1:3871594/93‑1 (MQ=255)
tAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATgg > 2:879515/1‑93 (MQ=255)
tAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATgg < 1:4532434/93‑1 (MQ=255)
aaCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGc < 2:5872203/93‑1 (MQ=255)
aCAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGcc < 1:2455446/93‑1 (MQ=255)
aGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCg > 1:4168724/1‑93 (MQ=255)
cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc < 1:2198079/93‑1 (MQ=255)
cTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGcc < 2:2257777/93‑1 (MQ=255)
tCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTg > 2:2966712/1‑93 (MQ=255)
cAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGGCCGCCTgag > 2:205244/1‑93 (MQ=255)
aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga < 1:5636396/93‑1 (MQ=255)
aGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTgaga > 2:3819656/1‑93 (MQ=255)
aCTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATc < 1:4494343/93‑1 (MQ=255)
tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCca > 2:5848721/1‑93 (MQ=255)
tAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCAATTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCca > 2:1741516/1‑93 (MQ=255)
aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac < 1:2233858/93‑1 (MQ=255)
aaCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcac > 1:4938907/1‑93 (MQ=255)
aCGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCcaca > 2:357308/1‑93 (MQ=255)
cGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaa < 2:1703295/93‑1 (MQ=255)
cGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaa < 2:4721964/93‑1 (MQ=255)
ggCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaat < 1:333765/93‑1 (MQ=255)
gCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatc > 1:4448541/1‑93 (MQ=255)
cGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatca < 2:3633362/93‑1 (MQ=255)
cGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatca > 1:5648017/1‑93 (MQ=255)
gTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaa < 1:5271682/93‑1 (MQ=255)
tgctgcTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAcaatcaat < 1:3503757/93‑1 (MQ=255)
gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata < 2:754148/93‑1 (MQ=255)
gctgctGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAata < 1:1203009/93‑1 (MQ=255)
ctgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAatat < 2:2552387/93‑1 (MQ=255)
tgctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATc > 1:3121991/1‑93 (MQ=255)
gctgGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcg > 1:3445267/1‑93 (MQ=255)
ggATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATcgcgg > 2:5171352/1‑92 (MQ=255)
tGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAc < 2:1186386/93‑1 (MQ=255)
gACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACt > 2:4958099/1‑93 (MQ=255)
gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa > 2:3448598/1‑93 (MQ=255)
gAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTaaa < 1:1987966/93‑1 (MQ=255)
aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg > 1:2568811/1‑93 (MQ=255)
aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg < 2:3251815/93‑1 (MQ=255)
aaTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAg > 2:633863/1‑93 (MQ=255)
aTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAgg < 2:3888142/93‑1 (MQ=255)
tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGt < 2:2655705/93‑1 (MQ=255)
tggtgcGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGt < 1:4271880/93‑1 (MQ=255)
tgcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGc > 1:3286067/5‑93 (MQ=255)
gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa < 1:2720030/90‑1 (MQ=255)
gcgcGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCa < 1:519879/90‑1 (MQ=255)
gTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGGCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAcc > 2:5691130/1‑93 (MQ=255)
tttCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAccc > 1:440899/1‑93 (MQ=255)
tttCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAccc > 2:426555/1‑93 (MQ=255)
ttCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCa < 2:2172564/93‑1 (MQ=255)
tcctcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCa < 1:4357119/91‑1 (MQ=255)
tctcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAc > 1:2549817/1‑93 (MQ=255)
tctcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAc < 1:5910278/93‑1 (MQ=255)
ctcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACg > 1:377217/1‑93 (MQ=255)
tcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGc > 1:1594440/1‑93 (MQ=255)
tcGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGc < 1:545005/93‑1 (MQ=255)
gcgGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAt > 2:5061513/1‑93 (MQ=255)
gcgGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAt > 1:181236/1‑93 (MQ=255)
ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa > 2:573132/1‑93 (MQ=255)
ggAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATaa > 1:3515187/1‑93 (MQ=255)
gAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAg > 2:403436/1‑93 (MQ=255)
gAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAg > 1:1011399/1‑93 (MQ=255)
gAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAg > 1:6034246/1‑93 (MQ=255)
aGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGc < 1:2748736/93‑1 (MQ=255)
gCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCt > 1:6128581/1‑93 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTg < 2:2630441/93‑1 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTg < 1:2933533/93‑1 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTg < 1:1482046/93‑1 (MQ=255)
catcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGGGGCAGACCCACGCATAAGCTg > 2:1493218/1‑93 (MQ=255)
atcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTgg < 1:2103082/93‑1 (MQ=255)
atcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTgg < 2:3713156/93‑1 (MQ=255)
tcatTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGt < 2:5615234/93‑1 (MQ=255)
catTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATTCACAATCAATATCGCGTGACTAAAGGATGCAGGCAGACGCAAAAGCTtgtg > 2:4406905/1‑93 (MQ=255)
catTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTg > 1:5952070/1‑93 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa > 2:1250686/1‑93 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa > 2:4395545/1‑93 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa < 2:6221156/93‑1 (MQ=255)
atTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGa > 2:1333978/1‑93 (MQ=255)
cTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGt < 2:4168724/93‑1 (MQ=255)
cTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGt > 2:1234713/1‑93 (MQ=255)
ttgttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTg < 2:812205/93‑1 (MQ=255)
gttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGcc > 1:6271068/1‑93 (MQ=255)
ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc < 1:1277173/93‑1 (MQ=255)
ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc < 2:2371341/93‑1 (MQ=255)
ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc > 1:4787003/1‑93 (MQ=255)
ttgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGccc < 2:51320/93‑1 (MQ=255)
tgGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCt < 2:3469170/93‑1 (MQ=255)
ggTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTg > 1:4041139/1‑93 (MQ=255)
gTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGa < 2:144305/93‑1 (MQ=255)
tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc > 1:1861627/1‑93 (MQ=255)
tttGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAc < 2:1016763/93‑1 (MQ=255)
|
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC > NC_000913/3980864‑3981043
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG > NC_000913/3980861‑3981044
|
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG > SRR4302533.3228057/1‑94 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG > SRR4302533.3329108/1‑94 (MQ=60)
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTG > SRR4302533.2749127/1‑94 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302533.523968/94‑1 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302533.5341087/94‑1 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT < SRR4302533.5529505/94‑1 (MQ=60)
AGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGT > SRR4302533.3280659/1‑94 (MQ=60)
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG < SRR4302533.3925700/94‑1 (MQ=60)
GAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCG < SRR4302533.1440589/94‑1 (MQ=60)
AAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGC > SRR4302533.2272448/1‑94 (MQ=60)
AGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCT < SRR4302533.6331702/94‑1 (MQ=60)
GATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTG < SRR4302533.874182/94‑1 (MQ=60)
ATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGG < SRR4302533.4078443/94‑1 (MQ=60)
TAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGA < SRR4302533.438702/94‑1 (MQ=60)
AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGATTGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302533.5981176/94‑1 (MQ=60)
AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302533.3849776/94‑1 (MQ=60)
AAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGAT < SRR4302533.105869/94‑1 (MQ=60)
AGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATG < SRR4302533.3946538/94‑1 (MQ=60)
GTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGG < SRR4302533.3895223/94‑1 (MQ=60)
TAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGC < SRR4302533.4559877/94‑1 (MQ=60)
ACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCC < SRR4302533.2470599/94‑1 (MQ=60)
CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCG > SRR4302533.4193988/1‑94 (MQ=60)
CAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCG > SRR4302533.4101003/1‑94 (MQ=60)
AGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGC > SRR4302533.4490886/1‑94 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT < SRR4302533.2211621/94‑1 (MQ=60)
CTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCT > SRR4302533.265978/1‑94 (MQ=60)
CCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAG < SRR4302533.1937330/94‑1 (MQ=60)
AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT > SRR4302533.2791722/1‑94 (MQ=60)
AGACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT < SRR4302533.5670479/94‑1 (MQ=60)
AGACTAACGCCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGAT < SRR4302533.5780259/94‑1 (MQ=60)
GACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATC > SRR4302533.3337897/1‑94 (MQ=60)
ACTAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCC < SRR4302533.4521560/94‑1 (MQ=60)
TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAC > SRR4302533.4968804/1‑94 (MQ=60)
TAACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCAC < SRR4302533.1113924/94‑1 (MQ=60)
GACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTGCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA < SRR4302533.939044/94‑1 (MQ=60)
AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA < SRR4302533.2247641/94‑1 (MQ=60)
AACGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACA < SRR4302533.2621651/94‑1 (MQ=60)
CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATTGCCCGCCTGAGTTCCACAAT > SRR4302533.1198980/1‑94 (MQ=60)
CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT < SRR4302533.4531920/94‑1 (MQ=60)
CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT < SRR4302533.3764367/94‑1 (MQ=60)
CGGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAAT < SRR4302533.2581166/94‑1 (MQ=60)
GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC < SRR4302533.335805/94‑1 (MQ=60)
GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC > SRR4302533.4475446/1‑94 (MQ=60)
GGCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATC > SRR4302533.2479299/1‑94 (MQ=60)
GCGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCA > SRR4302533.5682160/1‑94 (MQ=60)
CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA > SRR4302533.4614104/1‑94 (MQ=60)
CGTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAA > SRR4302533.4610510/1‑94 (MQ=60)
GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT < SRR4302533.5231282/94‑1 (MQ=60)
GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT < SRR4302533.5303297/94‑1 (MQ=60)
GTGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAAT > SRR4302533.5666313/1‑94 (MQ=60)
TGCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATA < SRR4302533.3525356/94‑1 (MQ=60)
GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT < SRR4302533.1210240/94‑1 (MQ=60)
GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT < SRR4302533.3753404/94‑1 (MQ=60)
GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT < SRR4302533.1732950/94‑1 (MQ=60)
GCTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATAT > SRR4302533.6056741/1‑94 (MQ=60)
CTGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATC > SRR4302533.3141186/1‑94 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG > SRR4302533.1448738/1‑94 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302533.522366/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302533.3911839/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG > SRR4302533.3466542/1‑94 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG < SRR4302533.3370044/94‑1 (MQ=60)
TGCTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCG > SRR4302533.3271484/1‑94 (MQ=60)
CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTTGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCG > SRR4302533.4934727/1‑94 (MQ=60)
CTGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGCTCGCCCGCCTGAGATCCACCATCAATATCGCG > SRR4302533.4508040/1‑94 (MQ=60)
TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT < SRR4302533.1233434/94‑1 (MQ=60)
TGGATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGT > SRR4302533.2923749/1‑94 (MQ=60)
GATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGA > SRR4302533.5285453/1‑94 (MQ=60)
ATGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGAC > SRR4302533.5949168/1‑94 (MQ=60)
TGACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACT > SRR4302533.770795/1‑94 (MQ=60)
GACGAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTA < SRR4302533.2763933/94‑1 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG > SRR4302533.2584617/1‑94 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG < SRR4302533.2000126/94‑1 (MQ=60)
GAATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAG < SRR4302533.207148/94‑1 (MQ=60)
AATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGG < SRR4302533.3507635/94‑1 (MQ=60)
ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT > SRR4302533.1518118/1‑94 (MQ=60)
ATGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGT > SRR4302533.4079545/1‑94 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302533.3808078/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302533.2214087/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302533.88616/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302533.184652/94‑1 (MQ=60)
TGGTGCGCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTG < SRR4302533.4297591/94‑1 (MQ=60)
gtgcgCGTTTCTCGCGGAGTATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGC > SRR4302533.4234048/6‑94 (MQ=60)
gtgcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGC > SRR4302533.3306352/6‑94 (MQ=60)
tgcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCA < SRR4302533.1352881/90‑1 (MQ=60)
gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG < SRR4302533.522967/91‑1 (MQ=60)
gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG < SRR4302533.2736726/91‑1 (MQ=60)
gcgCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTAGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAG > SRR4302533.4473891/4‑94 (MQ=60)
GCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGGCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAC > SRR4302533.10239/1‑94 (MQ=60)
GCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATCTCGCGTGACTACAGGTGCCAGAC > SRR4302533.1439448/1‑94 (MQ=60)
GCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAC > SRR4302533.5498600/1‑94 (MQ=60)
CGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACC < SRR4302533.5748225/94‑1 (MQ=60)
GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGAGCC > SRR4302533.4401059/1‑94 (MQ=60)
GTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCC > SRR4302533.443531/1‑94 (MQ=60)
TTTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCA < SRR4302533.3125435/94‑1 (MQ=60)
TTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAC > SRR4302533.2565512/1‑94 (MQ=60)
TTCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAC > SRR4302533.2953891/1‑94 (MQ=60)
TCCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCAC < SRR4302533.4383419/94‑1 (MQ=60)
TCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACG < SRR4302533.5945984/94‑1 (MQ=60)
TCTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACG > SRR4302533.379490/1‑94 (MQ=60)
CTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGC > SRR4302533.1604088/1‑94 (MQ=60)
CTCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGC < SRR4302533.350272/94‑1 (MQ=60)
TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCA < SRR4302533.548242/94‑1 (MQ=60)
TCGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCA > SRR4302533.3529990/1‑94 (MQ=60)
CGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAT > SRR4302533.407503/1‑94 (MQ=60)
CGCGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCAT > SRR4302533.182365/1‑94 (MQ=60)
CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA > SRR4302533.4030244/1‑94 (MQ=60)
CGGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAA > SRR4302533.3536852/1‑94 (MQ=60)
GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG > SRR4302533.1017318/1‑94 (MQ=60)
GGAGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG > SRR4302533.6070813/1‑94 (MQ=60)
GGAGCATCATTTTCTCGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAG < SRR4302533.4881847/94‑1 (MQ=60)
AGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCT < SRR4302533.2765590/94‑1 (MQ=60)
AGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCT > SRR4302533.6165514/1‑94 (MQ=60)
AGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCT < SRR4302533.1711304/94‑1 (MQ=60)
AGCATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCT < SRR4302533.5672158/94‑1 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG < SRR4302533.1490993/94‑1 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG < SRR4302533.6088051/94‑1 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG > SRR4302533.1598975/1‑94 (MQ=60)
CATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGG < SRR4302533.2951471/94‑1 (MQ=60)
ATCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGT < SRR4302533.2116049/94‑1 (MQ=60)
TCATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTG > SRR4302533.5988074/1‑94 (MQ=60)
CATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGA > SRR4302533.3319425/1‑94 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT < SRR4302533.618497/94‑1 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT < SRR4302533.2204122/94‑1 (MQ=60)
ATTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGAT > SRR4302533.218321/1‑94 (MQ=60)
TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTACAGGTGGCAGACCCACGCATAAGCTGGTGATG > SRR4302533.5341199/1‑94 (MQ=60)
TTTTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATG < SRR4302533.1559103/94‑1 (MQ=60)
TTCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCG < SRR4302533.2457021/94‑1 (MQ=60)
TCTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGT < SRR4302533.2496956/94‑1 (MQ=60)
TTTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTG < SRR4302533.4372172/94‑1 (MQ=60)
TTGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATACGCTGGTGATGCGTGC > SRR4302533.193614/1‑94 (MQ=60)
TGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCC > SRR4302533.6156793/1‑94 (MQ=60)
TGTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCC > SRR4302533.6308529/1‑94 (MQ=60)
GTTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCC > SRR4302533.4815993/1‑94 (MQ=60)
TTGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCT < SRR4302533.1284849/94‑1 (MQ=60)
TGGTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTG > SRR4302533.4065734/1‑94 (MQ=60)
GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC < SRR4302533.4317028/94‑1 (MQ=60)
GTTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGAC > SRR4302533.1872978/1‑94 (MQ=60)
TTTGTCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG > SRR4302533.2379261/1‑94 (MQ=60)
|
CAGGAAGATAAGTAACAGCTTCCAGACTAACGGCGTGCTGCTGGATGACGAATGGTGGCCGTTTCTCGCGGAGCATCATTTTCTTGTTGGTTTATCGCTGGATGGCCCGCCTGAGATCCACAATCAATATCGCGTGACTAAAGGTGGCAGACCCACGCATAAGCTGGTGATGCGTGCCCTGACG > NC_000913/3980861‑3981044
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
