Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,992,894 |
A→G |
T175A (ACG→GCG) |
dapF → |
diaminopimelate epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,992,894 | 0 | A | G | 100.0%
| 649.7
/ NA
| 201 | T175A (ACG→GCG) | dapF | diaminopimelate epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (94/107); total (94/107) |
Only 100 of 214 total aligned reads displayed.
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > NC_000913/3992805‑3992983
|
ccgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAgcgc < 1:636216/93‑1 (MQ=255)
cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt > 1:5800299/1‑93 (MQ=255)
cgAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCt > 1:2394258/1‑93 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt > 1:3100536/1‑93 (MQ=255)
gAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCtt < 1:2297982/93‑1 (MQ=255)
aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg > 2:5718938/1‑93 (MQ=255)
aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg > 1:3533524/1‑93 (MQ=255)
aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg < 1:1732382/93‑1 (MQ=255)
aGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTg < 2:5002682/93‑1 (MQ=255)
gCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTgg < 2:2932084/93‑1 (MQ=255)
gCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTgg > 1:191067/1‑93 (MQ=255)
aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc < 1:3396283/93‑1 (MQ=255)
aGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTc < 2:240923/93‑1 (MQ=255)
gACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTcc > 1:1377820/1‑93 (MQ=255)
aCAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCt > 1:6025961/1‑93 (MQ=255)
aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGGAGCGCTTGGTCCTGt > 1:4783893/1‑93 (MQ=255)
aaTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGt > 1:2080796/1‑93 (MQ=255)
aTCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGtt > 2:1946350/1‑93 (MQ=255)
cTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCt < 2:427766/93‑1 (MQ=255)
cTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCt < 2:2718157/93‑1 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa > 2:2543751/1‑93 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa < 2:2122406/93‑1 (MQ=255)
gcggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGaaa < 1:4029964/93‑1 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc < 2:5667691/93‑1 (MQ=255)
ggcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc > 2:195551/1‑93 (MQ=255)
ggattggtggAGATGGGAAATCCGCAGTGCAAGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGc < 2:4601350/89‑1 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc > 2:4161213/1‑93 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc < 2:4075231/93‑1 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc < 1:5356751/93‑1 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc < 2:690653/93‑1 (MQ=255)
gcgTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGcc < 1:2624580/93‑1 (MQ=255)
gtggtgTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc > 2:661503/1‑93 (MQ=255)
gtggtgTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCAc < 1:6273593/93‑1 (MQ=255)
tggtgTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCGTGGTCCTGTTCGGGAAGGTCACg > 1:129501/1‑93 (MQ=255)
ggtgTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa < 1:3151354/93‑1 (MQ=255)
ggtgTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGa < 1:2931023/93‑1 (MQ=255)
gtgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg < 1:843888/93‑1 (MQ=255)
gtgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg > 2:2819184/1‑93 (MQ=255)
gcgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAg < 2:5859641/91‑1 (MQ=255)
tgtCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGc < 2:4347005/93‑1 (MQ=255)
tCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt > 1:1210018/1‑93 (MQ=255)
tCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGt > 2:5147109/1‑93 (MQ=255)
cGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtt > 1:2176894/1‑93 (MQ=255)
aTGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtttt > 2:3614006/1‑93 (MQ=255)
aTGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGtttt > 2:4670853/1‑93 (MQ=255)
ggAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCg < 2:5598121/93‑1 (MQ=255)
aaaTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGAGCTTGGGCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGa > 2:289790/1‑93 (MQ=255)
aTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgg > 1:2108059/1‑92 (MQ=255)
aTCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgc > 1:1004445/1‑93 (MQ=255)
tCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAgcg < 1:5932256/93‑1 (MQ=255)
cacATTGAGTTATTTAGGTGGACGATGTCGATACCGCGGCCGTATAAGTGTTTGGTACTGTTCTGGAAAGACACGAGAGATTTCAGAAacgcg > 2:2387651/3‑93 (MQ=255)
cATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGcc > 1:4056160/1‑93 (MQ=255)
aTTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa > 2:3558032/1‑93 (MQ=255)
aTTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCa > 1:5322828/1‑93 (MQ=255)
ttGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCaa > 2:5282991/1‑93 (MQ=255)
gCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata < 1:4105458/93‑1 (MQ=255)
gCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata < 1:2071376/93‑1 (MQ=255)
gCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAata < 1:5993347/93‑1 (MQ=255)
cGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAatat > 2:4231272/1‑93 (MQ=255)
gTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATc > 1:468515/1‑93 (MQ=255)
gTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTGTCCGGAGCGCGCCAATATc < 2:6136371/93‑1 (MQ=255)
tGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCg < 1:614755/93‑1 (MQ=255)
gATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCgg > 2:4868766/1‑93 (MQ=255)
ttCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGtt < 2:1816650/93‑1 (MQ=255)
aGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa < 1:1008868/93‑1 (MQ=255)
aGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTa < 1:697975/93‑1 (MQ=255)
ggTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAt < 1:5608889/93‑1 (MQ=255)
tCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGc > 1:784672/1‑93 (MQ=255)
tCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGc > 1:3873622/1‑93 (MQ=255)
cGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCa < 2:5458078/93‑1 (MQ=255)
gatgatGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCaa < 2:6202969/93‑1 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg < 2:891604/93‑1 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg > 1:1569133/1‑93 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg < 1:4398426/93‑1 (MQ=255)
atgatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAg < 2:2056910/93‑1 (MQ=255)
gatgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTg > 2:2401035/1‑93 (MQ=255)
atgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTgg < 2:1709888/93‑1 (MQ=255)
tgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGt > 2:4926326/1‑93 (MQ=255)
tgTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGt < 2:539832/93‑1 (MQ=255)
cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa < 2:6177871/93‑1 (MQ=255)
cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa < 2:1726368/93‑1 (MQ=255)
cGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTaa < 2:4759624/93‑1 (MQ=255)
aTACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgc > 2:5114538/1‑93 (MQ=255)
tACCGCGGCGGTAGAAGCGCGTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgcg < 2:121889/93‑1 (MQ=255)
aCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgcgc > 2:5078767/1‑93 (MQ=255)
aCCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAgcgc > 1:5727696/1‑93 (MQ=255)
ccGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGcgcg < 2:3707506/93‑1 (MQ=255)
cgcgGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGa < 1:2043887/93‑1 (MQ=255)
cggcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGc > 1:3711341/1‑93 (MQ=255)
gcggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCat < 1:248900/93‑1 (MQ=255)
cggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCata < 1:4453832/93‑1 (MQ=255)
ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat > 1:5295921/1‑93 (MQ=255)
ggTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCatat > 2:3232891/1‑93 (MQ=255)
gTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGATTTATGCAAGTGGTTAAGCGCGAGCATAtt > 2:1291427/1‑93 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg > 2:2763737/1‑93 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg < 2:3097249/93‑1 (MQ=255)
aGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCg < 1:2235911/93‑1 (MQ=255)
gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt < 2:1622735/93‑1 (MQ=255)
gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt < 2:6042293/93‑1 (MQ=255)
gAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGt > 1:2134920/1‑93 (MQ=255)
|
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > NC_000913/3992805‑3992983
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA > NC_000913/3992801‑3992986
|
GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAG < SRR4302533.2811788/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302533.5163814/94‑1 (MQ=60)
CCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGC < SRR4302533.5212307/94‑1 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCTTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT < SRR4302533.3406194/94‑1 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT < SRR4302533.639963/94‑1 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302533.2409037/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302533.5835340/1‑94 (MQ=60)
CCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCT > SRR4302533.3940594/1‑94 (MQ=60)
CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT > SRR4302533.3119596/1‑94 (MQ=60)
CGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTT > SRR4302533.2149721/1‑94 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG > SRR4302533.3555297/1‑94 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG < SRR4302533.2312235/94‑1 (MQ=60)
GAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTG > SRR4302533.2274294/1‑94 (MQ=60)
AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG > SRR4302533.3844181/1‑94 (MQ=60)
AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG > SRR4302533.192267/1‑94 (MQ=60)
AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG > SRR4302533.1748566/1‑94 (MQ=60)
AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG < SRR4302533.1742884/94‑1 (MQ=60)
AGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGG > SRR4302533.2331092/1‑94 (MQ=60)
CAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC < SRR4302533.2139123/94‑1 (MQ=60)
CAGACAATCTTATGCGGCGTGGCGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGCTGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTC > SRR4302533.2626356/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC < SRR4302533.3417256/94‑1 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302533.1386108/1‑94 (MQ=60)
AGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCC > SRR4302533.1220663/1‑94 (MQ=60)
GACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCT > SRR4302533.6062477/1‑94 (MQ=60)
CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGGAGCGCTTGGTCCTGT > SRR4302533.4812870/1‑94 (MQ=60)
CAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGT > SRR4302533.2093600/1‑94 (MQ=60)
AATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTT < SRR4302533.1767357/94‑1 (MQ=60)
TCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCT < SRR4302533.5356486/94‑1 (MQ=60)
TCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCT < SRR4302533.205936/94‑1 (MQ=60)
CTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTG > SRR4302533.2094321/1‑94 (MQ=60)
ATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAA < SRR4302533.4088660/94‑1 (MQ=60)
GCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAG < SRR4302533.4054493/94‑1 (MQ=60)
GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC > SRR4302533.2301931/1‑94 (MQ=60)
GGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCC > SRR4302533.4756199/1‑94 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302533.2640686/94‑1 (MQ=60)
GCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCA < SRR4302533.5388905/94‑1 (MQ=60)
GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACG < SRR4302533.6311063/94‑1 (MQ=60)
GTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCGTGGTCCTGTTCGGGAAGGTCACG > SRR4302533.130312/1‑94 (MQ=60)
GGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG < SRR4302533.3170729/94‑1 (MQ=60)
GGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAG < SRR4302533.2948950/94‑1 (MQ=60)
GTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC < SRR4302533.848821/94‑1 (MQ=60)
GTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGC < SRR4302533.6201752/94‑1 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCTGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCG < SRR4302533.2727746/94‑1 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCG > SRR4302533.673697/1‑94 (MQ=60)
TGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCG < SRR4302533.3471839/94‑1 (MQ=60)
GTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGT > SRR4302533.1217284/1‑94 (MQ=60)
TCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTT > SRR4302533.2190314/1‑94 (MQ=60)
CGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTT > SRR4302533.4139968/1‑94 (MQ=60)
GGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCG < SRR4302533.2087343/94‑1 (MQ=60)
AAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG < SRR4302533.4961334/94‑1 (MQ=60)
AAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG < SRR4302533.823385/94‑1 (MQ=60)
AAAACCGCCTTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAG < SRR4302533.4067649/94‑1 (MQ=60)
AATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGG > SRR4302533.2121062/1‑94 (MQ=60)
AATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC > SRR4302533.1010320/1‑94 (MQ=60)
AATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGC > SRR4302533.1175076/1‑94 (MQ=60)
ATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGTGACGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG < SRR4302533.6242909/94‑1 (MQ=60)
ATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCG < SRR4302533.5329276/94‑1 (MQ=60)
TCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGC > SRR4302533.1004715/1‑94 (MQ=60)
TCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGC < SRR4302533.5968119/94‑1 (MQ=60)
CCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCG < SRR4302533.1980067/94‑1 (MQ=60)
GCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTATAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCC > SRR4302533.3405604/1‑94 (MQ=60)
GCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCC < SRR4302533.2220244/94‑1 (MQ=60)
GCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCC > SRR4302533.4080853/1‑94 (MQ=60)
CATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCA > SRR4302533.5354726/1‑94 (MQ=60)
TGGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAAT < SRR4302533.4448434/94‑1 (MQ=60)
TGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATA < SRR4302533.5668714/94‑1 (MQ=60)
GCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT < SRR4302533.4130426/94‑1 (MQ=60)
GCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT < SRR4302533.6029650/94‑1 (MQ=60)
GCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT > SRR4302533.6226671/1‑94 (MQ=60)
GCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATAT < SRR4302533.2084134/94‑1 (MQ=60)
CGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATC > SRR4302533.471313/1‑94 (MQ=60)
GTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCG < SRR4302533.24215/94‑1 (MQ=60)
TGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG < SRR4302533.618367/94‑1 (MQ=60)
TGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGG > SRR4302533.4207536/1‑94 (MQ=60)
GATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGT < SRR4302533.6044191/94‑1 (MQ=60)
GATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGT < SRR4302533.2584433/94‑1 (MQ=60)
TCAGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTT < SRR4302533.5856955/94‑1 (MQ=60)
AGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302533.1014772/94‑1 (MQ=60)
AGGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTAT < SRR4302533.702103/94‑1 (MQ=60)
GGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATG < SRR4302533.5993554/94‑1 (MQ=60)
GGTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATG < SRR4302533.5642786/94‑1 (MQ=60)
GTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC > SRR4302533.3897268/1‑94 (MQ=60)
GTCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGC > SRR4302533.789287/1‑94 (MQ=60)
TCGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCA < SRR4302533.1317542/94‑1 (MQ=60)
CGATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAA > SRR4302533.3154676/1‑94 (MQ=60)
GATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAG > SRR4302533.1578582/1‑94 (MQ=60)
ATGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGT < SRR4302533.4424981/94‑1 (MQ=60)
TGATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTG > SRR4302533.6332636/1‑94 (MQ=60)
GATGTCGATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGG > SRR4302533.5766264/1‑94 (MQ=60)
ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG > SRR4302533.1434637/1‑94 (MQ=60)
ATACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCG < SRR4302533.1012284/94‑1 (MQ=60)
TACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGC > SRR4302533.5762283/1‑94 (MQ=60)
TACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGC < SRR4302533.2004324/94‑1 (MQ=60)
ACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCG < SRR4302533.1622165/94‑1 (MQ=60)
ACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCG > SRR4302533.728228/1‑94 (MQ=60)
ACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCG < SRR4302533.615933/94‑1 (MQ=60)
ACCGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCG < SRR4302533.3073048/94‑1 (MQ=60)
CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG > SRR4302533.3586047/1‑94 (MQ=60)
CGCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAG < SRR4302533.2056487/94‑1 (MQ=60)
GCGGCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGC > SRR4302533.3734132/1‑94 (MQ=60)
GCGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATA < SRR4302533.250436/94‑1 (MQ=60)
CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT > SRR4302533.5327641/1‑94 (MQ=60)
CGGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATAT < SRR4302533.4480761/94‑1 (MQ=60)
GGTAGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATT < SRR4302533.5431737/94‑1 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > SRR4302533.5431417/1‑94 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT > SRR4302533.2148084/1‑94 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT < SRR4302533.4625762/94‑1 (MQ=60)
AGAAGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGT < SRR4302533.2249734/94‑1 (MQ=60)
AGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA < SRR4302533.1471126/94‑1 (MQ=60)
AGCGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA > SRR4302533.838306/1‑94 (MQ=60)
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GCCGCCGAGCAGACAATCTTATGCGGCGTGGTGTCGATGGGAAATCCGCATTGCGTGATTCAGGTCGATGATGTCGATACCGCGGCGGTAGAAACGCTTGGTCCTGTTCTGGAAAGCCACGAGCGTTTTCCGGAGCGCGCCAATATCGGTTTTATGCAAGTGGTTAAGCGCGAGCATATTCGTTTA > NC_000913/3992801‑3992986
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
