Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
4,008,469 |
+G |
intergenic (+36/‑197) |
b4555 → / → yigM |
hypothetical protein/hypothetical protein |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 4,008,466 | 1 | . | G | 100.0%
| 531.7
/ NA
| 164 | intergenic (+33/‑200) | b4555/yigM | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (88/76); total (88/76) |
Only 100 of 172 total aligned reads displayed.
AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑GGG‑A‑AA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008399‑4008551
|
actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATggg > 1:2688598/5‑93 (MQ=255)
actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATggg < 1:2656113/89‑1 (MQ=255)
actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATggg > 2:5517684/5‑93 (MQ=255)
actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATggg < 1:1993023/89‑1 (MQ=255)
actgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AA‑GTCTGCATTATggg > 1:3118034/5‑93 (MQ=255)
ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGc < 2:1450881/90‑1 (MQ=255)
ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGc > 1:4618390/4‑93 (MQ=255)
ctgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGc < 1:4035461/90‑1 (MQ=255)
tgggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCa > 1:1750273/3‑93 (MQ=255)
gggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAg > 2:2095688/2‑93 (MQ=255)
ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGt < 2:236929/93‑1 (MQ=255)
ggCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGt < 2:3176408/93‑1 (MQ=255)
cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgc < 1:5539427/93‑2 (MQ=255)
cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgc < 2:6200703/93‑2 (MQ=255)
cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgc > 1:6162543/1‑92 (MQ=255)
cTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgc > 1:720482/1‑92 (MQ=255)
tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgcg > 2:2417089/1‑91 (MQ=255)
tACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTgcg > 1:5748970/1‑91 (MQ=255)
gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCgcacc > 1:1019375/3‑93 (MQ=255)
gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCgcacc > 2:3680671/3‑93 (MQ=255)
gccTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCgcacc > 2:398669/3‑93 (MQ=255)
cTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAg < 1:5209391/93‑1 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AATG‑CTGCATTATGGGCAGTGCGCACCAGc > 1:2632995/1‑93 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 2:351796/1‑93 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGc < 2:3465136/93‑1 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 2:2309666/1‑93 (MQ=255)
tGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 1:1680921/1‑93 (MQ=255)
gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGGG‑A‑AG‑G‑CTGCATTATGGGCAGGGCGCACCACCg > 2:5814954/1‑93 (MQ=255)
gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCg < 2:5172308/93‑1 (MQ=255)
gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCg > 2:2994525/1‑93 (MQ=255)
gAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCg < 1:4711253/93‑1 (MQ=255)
ggATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCt < 1:5903364/93‑1 (MQ=255)
tttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAt > 2:4091185/5‑93 (MQ=255)
ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc < 1:650055/90‑1 (MQ=255)
ttggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATc < 2:4996354/90‑1 (MQ=255)
tggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATcc < 1:1010049/91‑1 (MQ=255)
ggtgACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc > 1:1444153/2‑93 (MQ=255)
gACGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAg < 1:5351079/93‑1 (MQ=255)
cGGGATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGcg > 1:6236638/1‑92 (MQ=255)
gggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g > 2:2186921/1‑93 (MQ=255)
ggATGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 2:4893182/1‑92 (MQ=255)
aTGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:5920600/1‑90 (MQ=255)
aTGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:4369666/1‑90 (MQ=255)
aTGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa < 2:711517/93‑4 (MQ=255)
aTGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa < 2:5543605/93‑4 (MQ=255)
tGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag > 1:2014182/1‑89 (MQ=255)
tGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag > 1:3579576/1‑89 (MQ=255)
tGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag > 1:6081650/1‑89 (MQ=255)
tGAACGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaag > 1:419879/1‑89 (MQ=255)
aaCGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 2:4270714/1‑93 (MQ=255)
aaCGACGCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg < 1:2064397/93‑1 (MQ=255)
acgacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa > 2:1913156/1‑93 (MQ=255)
acgacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:765178/93‑1 (MQ=255)
acgacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 1:3184550/93‑1 (MQ=255)
acgacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa > 1:4576222/1‑93 (MQ=255)
gacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:2743801/93‑1 (MQ=255)
gacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 2:5321920/1‑93 (MQ=255)
gacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:4825751/93‑1 (MQ=255)
gacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt < 1:3473692/93‑1 (MQ=255)
gacgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 1:3576486/1‑93 (MQ=255)
acgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGGTTg > 1:5588423/1‑93 (MQ=255)
acgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 1:709619/1‑93 (MQ=255)
acgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg > 2:435163/1‑93 (MQ=255)
acgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg < 2:5714979/93‑1 (MQ=255)
cgCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg < 1:3051728/93‑1 (MQ=255)
gCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt < 1:2493861/93‑1 (MQ=255)
gCCGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt < 1:3313571/93‑1 (MQ=255)
ccGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa > 2:5347387/1‑93 (MQ=255)
cGAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTAc < 2:612060/93‑1 (MQ=255)
gAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:1499851/1‑93 (MQ=255)
gAAATGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:5116289/1‑93 (MQ=255)
aaaTGCTTTCAATGGC‑‑GGGTA‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTACATCCCGAGCTGGAAGTGATTGGTACTa < 2:1426094/93‑1 (MQ=255)
aaaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 1:3810435/1‑93 (MQ=255)
aaaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 1:5002868/1‑93 (MQ=255)
aaaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa < 1:2326490/93‑1 (MQ=255)
aaaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa > 2:4902070/1‑93 (MQ=255)
aaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa < 1:1989626/93‑1 (MQ=255)
aaTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTaa < 2:2978707/93‑1 (MQ=255)
aTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 1:1385819/93‑1 (MQ=255)
aTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 1:5931535/93‑1 (MQ=255)
aTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt > 1:973721/1‑93 (MQ=255)
aTGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt > 1:1236449/1‑93 (MQ=255)
tGCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 1:4356384/1‑93 (MQ=255)
gCTGTCGATGGCG‑GGG‑A‑AATG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc < 1:1074795/93‑1 (MQ=255)
gCTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGc < 2:3015091/93‑1 (MQ=255)
cTGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc > 2:6037881/1‑93 (MQ=255)
tGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg > 1:1575772/1‑93 (MQ=255)
tGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg > 2:5867509/1‑93 (MQ=255)
tGTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcg < 1:866946/93‑1 (MQ=255)
gTCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 1:3292984/93‑1 (MQ=255)
tCGGTGGCG‑GGG‑A‑AAGG‑CTGCATGATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGGGCTGGAAGTGATTGGTACTAATGCcgac < 2:4782770/93‑1 (MQ=255)
tCGATGGCG‑GGG‑ATAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 1:2163614/93‑1 (MQ=255)
tCGATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 1:5511444/93‑1 (MQ=255)
gATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga > 2:447040/1‑93 (MQ=255)
gATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 2:38650/93‑1 (MQ=255)
gATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 2:3320626/93‑1 (MQ=255)
gATGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 1:1526869/93‑1 (MQ=255)
aTGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:3021932/1‑93 (MQ=255)
aTGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac < 1:3621465/93‑1 (MQ=255)
aTGGCG‑GGG‑A‑AAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:6233158/1‑93 (MQ=255)
|
AACTGGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑‑GGG‑A‑AA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGAC > NC_000913/4008399‑4008551
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCGCTGGAAGGCTGGCGAACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCG > NC_000913/4008381‑4008560
|
tggaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG > SRR4302533.4347199/24‑94 (MQ=57)
tggaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG < SRR4302533.725472/71‑1 (MQ=57)
ggaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑G < SRR4302533.1492162/72‑1 (MQ=56)
gaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑GA > SRR4302533.570631/22‑94 (MQ=56)
gaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑GA < SRR4302533.4639773/73‑1 (MQ=56)
gaagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑GA < SRR4302533.1488020/73‑1 (MQ=56)
aagcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑GAA > SRR4302533.3519055/21‑94 (MQ=55)
gcggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAA‑G < SRR4302533.2615802/76‑1 (MQ=53)
cggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaagg < SRR4302533.4427539/77‑7 (MQ=57)
ggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggc < SRR4302533.6042832/78‑8 (MQ=57)
ggtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggc > SRR4302533.1248457/17‑87 (MQ=57)
gtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggct > SRR4302533.5714838/16‑86 (MQ=57)
gtggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggct < SRR4302533.1951459/79‑9 (MQ=57)
tggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggctg > SRR4302533.43879/15‑85 (MQ=57)
tggcgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGgaaaggctg < SRR4302533.355138/80‑10 (MQ=57)
cgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCAT > SRR4302533.4625322/12‑94 (MQ=49)
cgaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCAT > SRR4302533.2915384/12‑94 (MQ=49)
gaagaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATT > SRR4302533.3589461/11‑94 (MQ=49)
agaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTAT > SRR4302533.3330090/9‑94 (MQ=48)
agaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTAT < SRR4302533.2666254/86‑1 (MQ=48)
gaaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATG < SRR4302533.1052833/87‑1 (MQ=49)
aaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGG < SRR4302533.2348022/88‑1 (MQ=51)
aaactgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGG < SRR4302533.4657144/88‑1 (MQ=51)
AACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCGGGG‑‑AAA‑GTCTGCATTATGGG > SRR4302533.3137206/1‑94 (MQ=48)
AACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGG > SRR4302533.2705082/1‑94 (MQ=50)
AACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGG < SRR4302533.1644244/94‑1 (MQ=50)
ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGC < SRR4302533.2672427/94‑1 (MQ=53)
ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGC < SRR4302533.2005247/94‑1 (MQ=53)
ACTGGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGC > SRR4302533.4646378/1‑94 (MQ=53)
ctgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCA > SRR4302533.1760930/4‑94 (MQ=57)
ctgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCA < SRR4302533.4060026/91‑1 (MQ=57)
ctgGGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCA < SRR4302533.849893/91‑1 (MQ=57)
G‑GGCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGT > SRR4302533.1535130/1‑94 (MQ=60)
GCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGC > SRR4302533.724731/1‑94 (MQ=60)
GCTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGC > SRR4302533.6199597/1‑94 (MQ=60)
CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcg < SRR4302533.5572877/94‑3 (MQ=60)
CTACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcg > SRR4302533.5783651/1‑92 (MQ=60)
ACAGCCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGcgca < SRR4302533.6277876/94‑5 (MQ=60)
agcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACC < SRR4302533.5237275/91‑1 (MQ=60)
agcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACC > SRR4302533.5693748/4‑94 (MQ=60)
agcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACC > SRR4302533.1025366/4‑94 (MQ=60)
agcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACC > SRR4302533.1562424/4‑94 (MQ=60)
gcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCA > SRR4302533.97895/3‑94 (MQ=60)
gcCTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCA < SRR4302533.3114813/92‑1 (MQ=60)
C‑CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAG > SRR4302533.2061001/1‑94 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAT‑G‑CTGCATTATGGGCAGTGCGCACCAGC > SRR4302533.2649175/1‑94 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGC < SRR4302533.5240768/94‑1 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGC > SRR4302533.5281497/1‑94 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGC > SRR4302533.1691103/1‑94 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGC < SRR4302533.5893172/94‑1 (MQ=60)
CTGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGC > SRR4302533.6140799/1‑94 (MQ=60)
TGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCG < SRR4302533.1754882/94‑1 (MQ=57)
TGAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCG > SRR4302533.311955/1‑94 (MQ=57)
GAAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGT < SRR4302533.4739807/94‑1 (MQ=57)
AAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTC > SRR4302533.4802662/1‑94 (MQ=57)
AAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTC > SRR4302533.1798484/1‑94 (MQ=57)
AAGGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTC < SRR4302533.4651037/94‑1 (MQ=57)
GGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTG > SRR4302533.5093451/1‑94 (MQ=60)
GGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTG > SRR4302533.5056168/1‑94 (MQ=60)
GGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTG < SRR4302533.5939014/94‑1 (MQ=60)
GGATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTG < SRR4302533.3707720/94‑1 (MQ=60)
GATTGTATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGA < SRR4302533.5872538/94‑1 (MQ=60)
tgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAG > SRR4302533.1405984/14‑94 (MQ=60)
tgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAG < SRR4302533.6149351/81‑1 (MQ=60)
tgtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAG > SRR4302533.3367185/14‑94 (MQ=60)
gtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGA < SRR4302533.4321293/82‑1 (MQ=60)
gtattgcgtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGA < SRR4302533.251519/82‑1 (MQ=60)
T‑ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAC > SRR4302533.331590/1‑94 (MQ=60)
T‑ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGAC > SRR4302533.3030052/1‑94 (MQ=60)
ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACC > SRR4302533.3945787/1‑94 (MQ=60)
ATTGCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACC < SRR4302533.4518248/94‑1 (MQ=60)
GCGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTC < SRR4302533.3420724/94‑1 (MQ=60)
CGTTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCA > SRR4302533.4302974/1‑94 (MQ=60)
gtttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCAT < SRR4302533.4771578/89‑1 (MQ=60)
TG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCC < SRR4302533.2748331/94‑1 (MQ=60)
TG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCC < SRR4302533.1015955/94‑1 (MQ=60)
TG‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCC > SRR4302533.1452865/1‑94 (MQ=60)
ttgGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCC < SRR4302533.653891/91‑1 (MQ=60)
GTGACGGGATGAACGGCGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGA < SRR4302533.638927/94‑1 (MQ=60)
GACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC < SRR4302533.5383189/94‑1 (MQ=60)
GACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGC < SRR4302533.4875153/94‑1 (MQ=60)
ACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCG > SRR4302533.6273983/1‑94 (MQ=60)
CGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑G < SRR4302533.654173/94‑1 (MQ=60)
GGATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GGA > SRR4302533.2700209/1‑94 (MQ=60)
GATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑Ggaa < SRR4302533.1163654/94‑4 (MQ=60)
ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG > SRR4302533.422394/1‑94 (MQ=60)
ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG > SRR4302533.3601632/1‑94 (MQ=60)
ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG > SRR4302533.2026590/1‑94 (MQ=60)
ATGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAG > SRR4302533.6118427/1‑94 (MQ=60)
TGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGT < SRR4302533.2016301/94‑1 (MQ=60)
TGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGT < SRR4302533.2112503/94‑1 (MQ=60)
TGAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑Gggagt > SRR4302533.2259585/1‑89 (MQ=60)
GAACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTG < SRR4302533.404968/94‑1 (MQ=60)
AACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGA < SRR4302533.2077121/94‑1 (MQ=60)
AACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGA > SRR4302533.4603957/1‑94 (MQ=60)
ACGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAT < SRR4302533.3204137/94‑1 (MQ=60)
CGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT > SRR4302533.3598527/1‑94 (MQ=60)
CGACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATT > SRR4302533.296066/1‑94 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGGTTG > SRR4302533.5622187/1‑94 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG > SRR4302533.713810/1‑94 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG < SRR4302533.3495127/94‑1 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG < SRR4302533.237587/94‑1 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG > SRR4302533.315784/1‑94 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG < SRR4302533.2760624/94‑1 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG < SRR4302533.4854994/94‑1 (MQ=60)
GACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTG < SRR4302533.6030519/94‑1 (MQ=60)
ACGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGG < SRR4302533.560469/94‑1 (MQ=60)
CGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGT < SRR4302533.3070417/94‑1 (MQ=60)
CGCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGT < SRR4302533.3903849/94‑1 (MQ=60)
GCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA < SRR4302533.2509245/94‑1 (MQ=60)
GCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA > SRR4302533.3587940/1‑94 (MQ=60)
GCCGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTA < SRR4302533.3334030/94‑1 (MQ=60)
CGAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTACGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACT > SRR4302533.3409008/1‑94 (MQ=60)
GAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA > SRR4302533.2578166/1‑94 (MQ=60)
GAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA > SRR4302533.5033191/1‑94 (MQ=60)
GAAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTA > SRR4302533.3833740/1‑94 (MQ=60)
AAATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAA < SRR4302533.2340893/94‑1 (MQ=60)
AATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT > SRR4302533.979437/1‑94 (MQ=60)
AATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT > SRR4302533.1066069/1‑94 (MQ=60)
AATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT < SRR4302533.4515122/94‑1 (MQ=60)
AATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT > SRR4302533.1243837/1‑94 (MQ=60)
AATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAT < SRR4302533.2001805/94‑1 (MQ=60)
ATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATG > SRR4302533.4382678/1‑94 (MQ=60)
ATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATG < SRR4302533.1394158/94‑1 (MQ=60)
ATGCTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATG < SRR4302533.5967395/94‑1 (MQ=60)
GCTGTCGATGGC‑GGGGAAAT‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCC < SRR4302533.1081131/94‑1 (MQ=60)
CTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCG > SRR4302533.1585259/1‑94 (MQ=60)
CTGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCG > SRR4302533.3630606/1‑94 (MQ=60)
TGTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGA < SRR4302533.872027/94‑1 (MQ=60)
GTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC < SRR4302533.5462091/94‑1 (MQ=60)
GTCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGAC < SRR4302533.3313310/94‑1 (MQ=60)
TCGATGGC‑GGGGATAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACG < SRR4302533.2176926/94‑1 (MQ=60)
TCGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACG < SRR4302533.5544718/94‑1 (MQ=60)
CGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGA > SRR4302533.4281337/1‑94 (MQ=60)
CGATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGA > SRR4302533.3244615/1‑94 (MQ=60)
GATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC < SRR4302533.1536061/94‑1 (MQ=60)
GATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC > SRR4302533.6270481/1‑94 (MQ=60)
GATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC > SRR4302533.3040421/1‑94 (MQ=60)
GATGGC‑GGGGAAAG‑G‑CTGCATGATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAC < SRR4302533.1434815/94‑1 (MQ=60)
ATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACG > SRR4302533.4061225/1‑94 (MQ=60)
ATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACG < SRR4302533.6248425/94‑1 (MQ=60)
ATGGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACG < SRR4302533.3643750/94‑1 (MQ=60)
GGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302533.3079970/94‑1 (MQ=60)
GGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302533.5846030/94‑1 (MQ=60)
GGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302533.5211778/94‑1 (MQ=60)
GGC‑GGGGAAAG‑G‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCG < SRR4302533.3415015/94‑1 (MQ=60)
GGG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGCGATTGGTACTAATGCCGACGACGCGGTGC > SRR4302533.3640954/1‑94 (MQ=60)
GG‑‑AAAGG‑CTGCATTATGGGCAGTTCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACCACGCGGTGCC > SRR4302533.1525870/1‑94 (MQ=60)
GG‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCC > SRR4302533.512215/1‑94 (MQ=60)
G‑‑AAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCG > SRR4302533.4097476/1‑94 (MQ=60)
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TGCGCTGGAAGGCTGGCGAACT‑GGCTACAG‑CTGAAGGATTG‑ATTGCGTT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGGC‑GGG‑‑AAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCG > NC_000913/4008381‑4008560
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |