Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,009,719 |
C→T |
A230T (GCG→ACG) |
metR ← |
MetR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,009,719 | 0 | C | T | 100.0%
| 872.2
/ NA
| 239 | A230T (GCG→ACG) | metR | MetR |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (126/113); total (126/113) |
Only 100 of 250 total aligned reads displayed.
AGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGCGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACAT > NC_000913/4009629‑4009808
|
cTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCaa > 1:6004566/1‑93 (MQ=255)
ttCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAAc > 2:1378945/1‑93 (MQ=255)
cccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATc < 2:3813581/93‑1 (MQ=255)
ccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAACCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCt < 2:3608570/93‑1 (MQ=255)
ccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATCCCCATCCGCGTGGCAACCATCt < 1:2410771/93‑1 (MQ=255)
ccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCt > 1:3336701/1‑93 (MQ=255)
ccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCt < 1:283587/93‑1 (MQ=255)
ccAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCt < 2:6219806/93‑1 (MQ=255)
ccAGGGTTTTGGGCACCACCAGACCCTGGCGCTCAAAACTCTCTCCTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCt < 2:1533702/93‑1 (MQ=255)
aGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGa > 1:2697584/1‑93 (MQ=255)
gggTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGaa < 1:3218843/93‑1 (MQ=255)
gggTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGaa < 2:5223937/93‑1 (MQ=255)
gggTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGaa > 2:2997428/1‑93 (MQ=255)
ggTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAAt > 2:4387608/1‑93 (MQ=255)
ttttGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATca > 2:4014382/1‑93 (MQ=255)
ttttGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATca > 1:660490/1‑93 (MQ=255)
tttGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATcaa < 1:4808340/93‑1 (MQ=255)
tttGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATcaa > 1:6251179/1‑93 (MQ=255)
tCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCTCGTGGCAACCATCTGAATCAACAATa < 2:1845049/93‑1 (MQ=255)
tCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATa > 2:2688959/1‑93 (MQ=255)
caccacCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATaa > 1:5508198/1‑93 (MQ=255)
caccacCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATaa < 1:1463918/93‑1 (MQ=255)
caccacCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATaa > 1:4460086/1‑93 (MQ=255)
accaccAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGGAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAg > 2:262873/1‑93 (MQ=255)
accaccAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAg > 2:112025/1‑93 (MQ=255)
ccaccaGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAgg < 2:4425650/93‑1 (MQ=255)
caccaGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGCTAGCGCGGCTATACCCATCCGCGTAGCAACCATCTGAATCAACAATAAGgt > 2:4547142/1‑93 (MQ=255)
ccaGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGgtgt > 1:3827777/1‑93 (MQ=255)
ccaGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGgtgt < 1:4700337/93‑1 (MQ=255)
gACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTAt < 2:5985689/93‑1 (MQ=255)
gACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTAt > 1:2520018/1‑93 (MQ=255)
aCCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATc < 2:5504379/93‑1 (MQ=255)
aCCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATc < 2:3083799/93‑1 (MQ=255)
ccTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGa > 2:2405993/1‑93 (MQ=255)
ccTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGa < 2:4700283/93‑1 (MQ=255)
cTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGAc > 2:3176436/1‑93 (MQ=255)
cTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGAc > 1:5758121/1‑93 (MQ=255)
ggCGCTCAAAACTCTCTACTACCCAATGCGGTGGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGc > 1:1992623/1‑93 (MQ=255)
ggCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGc > 2:5371537/1‑93 (MQ=255)
gcTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCttt > 2:2114386/1‑93 (MQ=255)
gcTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCttt > 2:1989959/1‑93 (MQ=255)
gcTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCttt > 1:2808426/1‑93 (MQ=255)
cTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCtttt < 2:4836457/93‑1 (MQ=255)
tCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTc < 2:2813164/93‑1 (MQ=255)
cAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCa < 2:5061212/93‑1 (MQ=255)
aaaaCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAg > 1:4429266/1‑93 (MQ=255)
aaaaCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAg < 1:5052915/93‑1 (MQ=255)
aaaCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGt > 1:1621461/1‑93 (MQ=255)
aaCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTg < 2:1783686/93‑1 (MQ=255)
aCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGa < 2:2500852/93‑1 (MQ=255)
ctctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGAc > 1:5037484/1‑93 (MQ=255)
ctctctACTACCCAATGCGGCAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGAc < 1:4663591/93‑1 (MQ=255)
tctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACg < 1:5807330/93‑1 (MQ=255)
tctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACg > 2:1665944/1‑93 (MQ=255)
tctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACg > 2:4595882/1‑93 (MQ=255)
tctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACg > 2:3376974/1‑93 (MQ=255)
ctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACgg < 1:3100467/93‑1 (MQ=255)
ctctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACgg > 1:4845352/1‑93 (MQ=255)
tctACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACggg > 2:3663355/1‑93 (MQ=255)
tactacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCt < 2:3732550/93‑1 (MQ=255)
tactacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGCGCt > 1:4886691/1‑93 (MQ=255)
actacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGCGTTATCGACGCTTTTCAGTGACGGGCTg > 2:2256845/1‑93 (MQ=255)
ctacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGa > 1:2653096/1‑93 (MQ=255)
tacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGAc < 2:509365/93‑1 (MQ=255)
tacCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGAc > 1:6104995/1‑93 (MQ=255)
cccAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGGTATCGACGCTTTTCAGTGACGGGCTGACGc > 1:3788677/1‑93 (MQ=255)
ccAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGcc > 2:2024459/1‑93 (MQ=255)
ccAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGcc < 2:2583383/93‑1 (MQ=255)
cAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGCCGGGCTGACGCCt > 1:3520350/1‑93 (MQ=255)
cAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCt > 2:1285261/1‑93 (MQ=255)
aaTGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTg > 1:913219/1‑93 (MQ=255)
aaTGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTg > 1:3634554/1‑93 (MQ=255)
aTGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGc < 2:5416829/93‑1 (MQ=255)
cGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCgg > 2:2950527/1‑93 (MQ=255)
ggTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGc > 1:1100429/1‑93 (MQ=255)
ggTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGc < 2:2148308/93‑1 (MQ=255)
ggTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGc > 2:1693517/1‑93 (MQ=255)
cgGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTgaagaa < 1:2257741/93‑1 (MQ=255)
ggCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGaaa < 1:751107/93‑1 (MQ=255)
gCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGaaaa > 1:6139542/1‑93 (MQ=255)
gCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGaaaa < 2:3359247/93‑1 (MQ=255)
gCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGaaaa < 1:6269396/93‑1 (MQ=255)
cAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGTCTGACGCCTGCCGGCTGAAGAAAAt < 1:6207661/93‑1 (MQ=255)
aaTACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATg > 1:1886548/1‑93 (MQ=255)
aaTACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATg < 1:1284342/93‑1 (MQ=255)
aTACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgc > 1:2118130/1‑93 (MQ=255)
aTACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgc > 1:5228938/1‑93 (MQ=255)
tACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgcc > 2:1208851/1‑93 (MQ=255)
aCCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgccg > 2:4252296/1‑93 (MQ=255)
aCCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgccg < 1:4226544/93‑1 (MQ=255)
aCCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgccg < 2:772333/93‑1 (MQ=255)
cccATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgccgc < 1:4001098/93‑1 (MQ=255)
cccATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATgccgc < 1:3656828/93‑1 (MQ=255)
cATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTGAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCa < 2:2788978/93‑1 (MQ=255)
aTCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCaa > 2:5660518/1‑92 (MQ=255)
tCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGa < 1:1743443/93‑1 (MQ=255)
tCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGa < 2:735351/93‑1 (MQ=255)
ccGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGAc < 2:5557848/93‑1 (MQ=255)
cgcgtgGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACa > 1:1019190/1‑93 (MQ=255)
cgcgtgGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACa < 1:4613832/93‑1 (MQ=255)
|
AGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGCGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACAT > NC_000913/4009629‑4009808
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGCGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCCAG > NC_000913/4009626‑4009812
|
ACAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGT > SRR4302533.2392854/1‑94 (MQ=60)
ACAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGT < SRR4302533.6163475/94‑1 (MQ=60)
CAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTG > SRR4302533.3515460/1‑94 (MQ=60)
CAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTG > SRR4302533.2918884/1‑94 (MQ=60)
CAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTG > SRR4302533.1369947/1‑94 (MQ=60)
AGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGC < SRR4302533.1961513/94‑1 (MQ=60)
CCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAA > SRR4302533.4727569/1‑94 (MQ=60)
CCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAA > SRR4302533.6040947/1‑94 (MQ=60)
CTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAGCTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAAC < SRR4302533.3127035/94‑1 (MQ=60)
CTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAAC > SRR4302533.5414726/1‑94 (MQ=60)
TCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCA > SRR4302533.1307519/1‑94 (MQ=60)
GCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATC > SRR4302533.3739408/1‑94 (MQ=60)
CCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCT > SRR4302533.3357319/1‑94 (MQ=60)
CCCAGGGTTGTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCT < SRR4302533.5988247/94‑1 (MQ=60)
CCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATCCCCATCCGCGTGGCAACCATCTG < SRR4302533.2425662/94‑1 (MQ=60)
CCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTG < SRR4302533.285323/94‑1 (MQ=60)
CAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGA > SRR4302533.2714112/1‑94 (MQ=60)
CAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGA < SRR4302533.6303003/94‑1 (MQ=60)
AGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAA < SRR4302533.5145454/94‑1 (MQ=60)
GGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAAT < SRR4302533.3238690/94‑1 (MQ=60)
GGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAAT < SRR4302533.2361493/94‑1 (MQ=60)
GTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCA > SRR4302533.664380/1‑94 (MQ=60)
TTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAA > SRR4302533.6288575/1‑94 (MQ=60)
TTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAAC < SRR4302533.4837451/94‑1 (MQ=60)
TTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACA > SRR4302533.4537601/1‑94 (MQ=60)
TGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAA < SRR4302533.1770511/94‑1 (MQ=60)
TCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAA > SRR4302533.5541443/1‑94 (MQ=60)
TCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAA < SRR4302533.4477152/94‑1 (MQ=60)
TCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAA > SRR4302533.4487066/1‑94 (MQ=60)
CACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAG > SRR4302533.4398484/1‑94 (MQ=60)
CACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAG > SRR4302533.335575/1‑94 (MQ=60)
CACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAG < SRR4302533.9083/94‑1 (MQ=60)
CACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAG < SRR4302533.1472742/94‑1 (MQ=60)
ACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGG > SRR4302533.2006993/1‑94 (MQ=60)
CCACCAGCCCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATCCCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGT < SRR4302533.41615/94‑1 (MQ=60)
ACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGT < SRR4302533.3323146/94‑1 (MQ=60)
ACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGT > SRR4302533.3851178/1‑94 (MQ=60)
ACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGT > SRR4302533.6148084/1‑94 (MQ=60)
CCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTT < SRR4302533.4728836/94‑1 (MQ=60)
AGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTAT > SRR4302533.2535546/1‑94 (MQ=60)
GACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATC < SRR4302533.1678760/94‑1 (MQ=60)
GACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATC > SRR4302533.2926458/1‑94 (MQ=60)
CCCCTGGCGCCCAAAACTCTCTCCTCCCCAATGCGGTAGCGCGTCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCG < SRR4302533.1216442/94‑1 (MQ=60)
CCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGA > SRR4302533.5056444/1‑94 (MQ=60)
CCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGAC > SRR4302533.5792869/1‑94 (MQ=60)
TGGCGCTCAAAACTCTCTACTACCCAATGCGGTGGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGC > SRR4302533.2004842/1‑94 (MQ=60)
TGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGC < SRR4302533.4152419/94‑1 (MQ=60)
TGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGC > SRR4302533.2447696/1‑94 (MQ=60)
CGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTT < SRR4302533.2832489/94‑1 (MQ=60)
CGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTT > SRR4302533.2825708/1‑94 (MQ=60)
CGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTT > SRR4302533.2089794/1‑94 (MQ=60)
GCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTT < SRR4302533.6129412/94‑1 (MQ=60)
CTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTC > SRR4302533.2776747/1‑94 (MQ=60)
TCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCA > SRR4302533.3603449/1‑94 (MQ=60)
TCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCA < SRR4302533.4856427/94‑1 (MQ=60)
TCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCA < SRR4302533.4856428/94‑1 (MQ=60)
CAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAG > SRR4302533.2702404/1‑94 (MQ=60)
CAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAG > SRR4302533.4456041/1‑94 (MQ=60)
AAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGT < SRR4302533.6168617/94‑1 (MQ=60)
AAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGT < SRR4302533.5083465/94‑1 (MQ=60)
AAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGT > SRR4302533.1631288/1‑94 (MQ=60)
AAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTG < SRR4302533.5061655/94‑1 (MQ=60)
AAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTG < SRR4302533.1595345/94‑1 (MQ=60)
AACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGA < SRR4302533.796265/94‑1 (MQ=60)
AACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGA > SRR4302533.2569391/1‑94 (MQ=60)
ACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGAC > SRR4302533.5067987/1‑94 (MQ=60)
ACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGAC < SRR4302533.3852016/94‑1 (MQ=60)
CTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACG < SRR4302533.1887345/94‑1 (MQ=60)
CTCTCTACTACCCAATGCGGCAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACG < SRR4302533.4691848/94‑1 (MQ=60)
TCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGG < SRR4302533.5842397/94‑1 (MQ=60)
TCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGG > SRR4302533.4697893/1‑94 (MQ=60)
TCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGG > SRR4302533.4874720/1‑94 (MQ=60)
TCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGG < SRR4302533.3653752/94‑1 (MQ=60)
CTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGG < SRR4302533.2900191/94‑1 (MQ=60)
CTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGG < SRR4302533.3119527/94‑1 (MQ=60)
CTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCT < SRR4302533.4011529/94‑1 (MQ=60)
CTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCT < SRR4302533.6215132/94‑1 (MQ=60)
CTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGCGCT > SRR4302533.4916299/1‑94 (MQ=60)
TACTACACAATGCGGTACCCCGGCAATACCCAGCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTG < SRR4302533.6287187/94‑1 (MQ=60)
ACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGA > SRR4302533.2669394/1‑94 (MQ=60)
ACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGA > SRR4302533.5799139/1‑94 (MQ=60)
ACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGA > SRR4302533.5994572/1‑94 (MQ=60)
CTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGAC < SRR4302533.4889026/94‑1 (MQ=60)
CTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGAC > SRR4302533.6141859/1‑94 (MQ=60)
TACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACG > SRR4302533.4663141/1‑94 (MQ=60)
TACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACG < SRR4302533.2610333/94‑1 (MQ=60)
ACCCAATGCGGTAGCGCGGCAATCCCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGC < SRR4302533.4510368/94‑1 (MQ=60)
ACCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGGTATCGACGCTTTTCAGTGACGGGCTGACGC > SRR4302533.3811879/1‑94 (MQ=60)
CCCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCC > SRR4302533.5077435/1‑94 (MQ=60)
CCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGCCGGGCTGACGCCT > SRR4302533.3542052/1‑94 (MQ=60)
CCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCT > SRR4302533.3771794/1‑94 (MQ=60)
CCAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCT > SRR4302533.2205357/1‑94 (MQ=60)
CAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTG < SRR4302533.5672163/94‑1 (MQ=60)
CAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTG > SRR4302533.918583/1‑94 (MQ=60)
CAATGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTG > SRR4302533.3656908/1‑94 (MQ=60)
TGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCG < SRR4302533.719776/94‑1 (MQ=60)
TGCGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCG < SRR4302533.1244842/94‑1 (MQ=60)
CGGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGC > SRR4302533.1106954/1‑94 (MQ=60)
GGTAGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCT > SRR4302533.338783/1‑94 (MQ=60)
AGCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAA < SRR4302533.638333/94‑1 (MQ=60)
GCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAG < SRR4302533.474805/94‑1 (MQ=60)
GCGCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAG < SRR4302533.1579024/94‑1 (MQ=60)
GCGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAA > SRR4302533.3671203/1‑94 (MQ=60)
CGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAA < SRR4302533.2271713/94‑1 (MQ=60)
CGGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAA < SRR4302533.6325283/94‑1 (MQ=60)
GGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAA < SRR4302533.755531/94‑1 (MQ=60)
GGCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAA > SRR4302533.6176522/1‑94 (MQ=60)
GCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAAT < SRR4302533.6306856/94‑1 (MQ=60)
GCAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAAT > SRR4302533.1051935/1‑94 (MQ=60)
CAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGTCTGACGCCTGCCGGCTGAAGAAAATG < SRR4302533.6244890/94‑1 (MQ=60)
CAATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATG > SRR4302533.1898069/1‑94 (MQ=60)
AATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGC < SRR4302533.1292068/94‑1 (MQ=60)
AATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGC > SRR4302533.2131192/1‑94 (MQ=60)
AATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGC > SRR4302533.2383660/1‑94 (MQ=60)
AATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGC > SRR4302533.5260393/1‑94 (MQ=60)
AATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACACTTTTCAGTCACGGGCTGACGACTGCCGGCTGAAGAAcctgc > SRR4302533.2972436/1‑89 (MQ=60)
ATACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCC > SRR4302533.5105834/1‑94 (MQ=60)
ACCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGC < SRR4302533.4252103/94‑1 (MQ=60)
CCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCC < SRR4302533.4025461/94‑1 (MQ=60)
CCCATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCC < SRR4302533.3679309/94‑1 (MQ=60)
ATCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGA > SRR4302533.3844722/1‑94 (MQ=60)
TCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGAC > SRR4302533.4287348/1‑94 (MQ=60)
TCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGAC < SRR4302533.1754043/94‑1 (MQ=60)
TCCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGAC > SRR4302533.5733218/1‑94 (MQ=60)
CCGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACA > SRR4302533.1025179/1‑94 (MQ=60)
CGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACAT > SRR4302533.6248135/1‑94 (MQ=60)
CGCGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACAT < SRR4302533.4641780/94‑1 (MQ=60)
CGCGCGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACAT < SRR4302533.2823148/94‑1 (MQ=60)
CGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCC > SRR4302533.3242806/1‑94 (MQ=60)
CGTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCC < SRR4302533.4812624/94‑1 (MQ=60)
GTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCCA < SRR4302533.158737/94‑1 (MQ=60)
GTGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCCA < SRR4302533.605561/94‑1 (MQ=60)
TGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCCAG > SRR4302533.3545601/1‑94 (MQ=60)
|
ACAAGCCTTCGCCCAGGGTTTTGGTCACCACCAGACCCTGGCGCTCAAAACTCTCTACTACCCAATGCGGTAGCGCGGCAATACCCATCCGCGCGGCAACCATCTGAATCAACAATAAGGTGTTATCGACGCTTTTCAGTGACGGGCTGACGCCTGCCGGCTGAAGAAAATGCCGCCAGACATCCAG > NC_000913/4009626‑4009812
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
