Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1624 250.6 12620048 98.0% 12367647 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,039,960 Δ1 bp intergenic (+42/‑36) yihD → / → yihE hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,039,9590A.100.0% 1285.2 / NA 276intergenic (+41/‑37)yihD/yihEhypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (131/145);  total (131/145)

Only 100 of 291 total aligned reads displayed.

AGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG  >  NC_000913/4039867‑4040047
                                                                                            |                                                                                        
agaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATa                                                                                          <  2:4975231/93‑1 (MQ=255)
 gaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGGCACCAAAATCATCGTGAAATGATat                                                                                         >  2:316928/1‑92 (MQ=255)
 gaagaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATat                                                                                         <  1:2632530/93‑2 (MQ=255)
    gaCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATatcct                                                                                      >  1:5478165/1‑89 (MQ=255)
     aCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCtt                                                                                    <  2:605392/93‑1 (MQ=255)
     aCTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCtt                                                                                    <  2:5072347/93‑1 (MQ=255)
      cTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTc                                                                                   <  2:5903894/93‑1 (MQ=255)
          aaaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCa                                                                               >  2:1844215/1‑93 (MQ=255)
          aaaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCa                                                                               <  1:4100076/93‑1 (MQ=255)
           aaaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAt                                                                              >  2:2777597/1‑93 (MQ=255)
            aaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAtt                                                                             >  1:763996/1‑93 (MQ=255)
            aaCGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAtt                                                                             <  1:2885492/93‑1 (MQ=255)
              cGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCg                                                                           >  2:748028/1‑93 (MQ=255)
                  gcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAt                                                                       <  2:4269675/93‑1 (MQ=255)
                  gcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAt                                                                       <  1:1011059/93‑1 (MQ=255)
                  gcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAt                                                                       >  1:5894192/1‑93 (MQ=255)
                  gcTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATCAT‑ATCCTTCGTCATTCGTAAt                                                                       <  1:3230098/93‑1 (MQ=255)
                   cTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATg                                                                      >  1:3269971/1‑93 (MQ=255)
                    tGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGt                                                                     >  2:5392289/1‑93 (MQ=255)
                     gTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGtt                                                                    >  2:1588436/1‑93 (MQ=255)
                      ttACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGttt                                                                   <  1:1285774/93‑1 (MQ=255)
                      ttACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGttt                                                                   <  2:1954729/93‑1 (MQ=255)
                       tACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGtttt                                                                  <  1:4837655/93‑1 (MQ=255)
                       tACGCGCTCGCGGCGTAATCAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGtttt                                                                  <  1:1914387/93‑1 (MQ=255)
                        aCGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTc                                                                 <  1:420114/93‑1 (MQ=255)
                        aCGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTc                                                                 <  2:2061129/93‑1 (MQ=255)
                          gcgcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCg                                                               <  1:4760343/93‑1 (MQ=255)
                           cgcTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCgg                                                              <  1:1855236/93‑1 (MQ=255)
                             cTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgat                                                            <  2:1393859/93‑1 (MQ=255)
                             cTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgat                                                            <  1:2585923/93‑1 (MQ=255)
                             cTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgat                                                            >  1:1800107/1‑93 (MQ=255)
                             cTCGCGGCGGAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCGCCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgat                                                            <  2:5823563/93‑1 (MQ=255)
                               cgcgGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatga                                                          <  1:5154574/93‑1 (MQ=255)
                                gcggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatgat                                                         <  1:3750127/93‑1 (MQ=255)
                                gcggcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGgatgat                                                         >  1:2398314/1‑93 (MQ=255)
                                 cggcgTAATTAAAAAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGatgatg                                                        <  1:782456/93‑1 (MQ=255)
                                   gcgTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATggg                                                      >  2:4154949/1‑93 (MQ=255)
                                     gTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAt                                                    <  1:2508465/93‑1 (MQ=255)
                                      tAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATg                                                   >  2:1049126/1‑93 (MQ=255)
                                      tAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATg                                                   >  1:1555828/1‑93 (MQ=255)
                                       aaTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGa                                                  >  1:4318030/1‑93 (MQ=255)
                                       aaTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGa                                                  >  1:162289/1‑93 (MQ=255)
                                        aTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAACTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGCTGGGATGat                                                 >  2:2235799/1‑92 (MQ=255)
                                        aTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGaa                                                 >  2:4760808/1‑93 (MQ=255)
                                        aTTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGaa                                                 >  2:859966/1‑93 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAACATCATCGTGTAATGAT‑ATCCTTCGTCATTCGTAATGTTTTTCGGATGATGGGATGact                                                >  2:5628883/1‑91 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                >  2:1748069/1‑93 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                <  2:1480758/93‑1 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                <  1:2723318/93‑1 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                <  1:230690/93‑1 (MQ=255)
                                         ttAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAt                                                <  1:6227990/93‑1 (MQ=255)
                                          tAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATa                                               <  1:3394661/93‑1 (MQ=255)
                                           aaaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATaa                                              <  1:6182023/93‑1 (MQ=255)
                                           aaaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATaa                                              <  1:528897/93‑1 (MQ=255)
                                            aaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAc                                             >  1:5867651/1‑93 (MQ=255)
                                            aaGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAc                                             <  1:335372/93‑1 (MQ=255)
                                             agagTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACa                                            <  1:3108393/93‑1 (MQ=255)
                                              gagTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAcgg                                           <  2:3681365/93‑3 (MQ=255)
                                              gagTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAg                                           >  2:3480010/1‑93 (MQ=255)
                                                gTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgcg                                         >  1:3863156/1‑93 (MQ=255)
                                                gTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgcg                                         >  1:4520255/1‑93 (MQ=255)
                                                 tAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgcgc                                        <  2:4363159/93‑1 (MQ=255)
                                                 tAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAgcgc                                        <  2:2427219/93‑1 (MQ=255)
                                                  aaaaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCt                                       >  1:699434/1‑93 (MQ=255)
                                                    aaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCttt                                     >  1:1228583/1‑93 (MQ=255)
                                                    aaGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCttt                                     <  2:5320233/93‑1 (MQ=255)
                                                       cTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTat                                  >  1:2002545/1‑92 (MQ=255)
                                                        ttGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACt                                 >  1:427803/1‑93 (MQ=255)
                                                        ttGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACt                                 >  2:2850305/1‑93 (MQ=255)
                                                        ttGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACt                                 >  1:1966575/1‑93 (MQ=255)
                                                         tGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACtt                                >  2:4679905/1‑93 (MQ=255)
                                                           tAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTc                              >  1:5408607/1‑93 (MQ=255)
                                                               cggcgCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGa                          <  1:5249549/93‑1 (MQ=255)
                                                                ggcgCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGGTGATGGGATGAATAACACAGCTTTTACTTTCCAGac                         >  2:1266843/1‑93 (MQ=255)
                                                                 gcgcCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGaca                        <  2:4018691/93‑1 (MQ=255)
                                                                   gcCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACt                      >  2:450241/1‑93 (MQ=255)
                                                                    ccaccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTa                     <  1:102556/93‑1 (MQ=255)
                                                                      accaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTaca                   >  2:614628/1‑93 (MQ=255)
                                                                      accaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTaca                   <  1:2172305/93‑1 (MQ=255)
                                                                       ccaAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTacac                  >  1:4415512/1‑93 (MQ=255)
                                                                        caAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAcc                 <  2:3076986/93‑1 (MQ=255)
                                                                         aaaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAccc                <  2:1111289/93‑1 (MQ=255)
                                                                          aaaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCg               >  1:4341531/1‑93 (MQ=255)
                                                                          aaaTCAGCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGTATGAATAACAGCGCTTTTACTTTCCAGACACTACCCCCg               <  2:2480468/93‑1 (MQ=255)
                                                                           aaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACGCCCgg              <  1:1456592/93‑1 (MQ=255)
                                                                           aaTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCgg              <  1:4618817/93‑1 (MQ=255)
                                                                            atcatcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGa             <  2:384462/93‑1 (MQ=255)
                                                                             tcatcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAt            >  2:3575030/1‑93 (MQ=255)
                                                                             tcatcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAt            >  1:1702262/1‑93 (MQ=255)
                                                                              catcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATa           >  2:1226259/1‑93 (MQ=255)
                                                                               atcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATAc          >  2:3028688/1‑93 (MQ=255)
                                                                                tcGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATAcc         >  2:3320744/1‑93 (MQ=255)
                                                                                 cGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACca        <  1:3052709/93‑1 (MQ=255)
                                                                                 cGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACca        <  2:1142923/93‑1 (MQ=255)
                                                                                  gTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcat       <  1:5775707/93‑1 (MQ=255)
                                                                                     aaaTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcatcat    >  2:515974/1‑93 (MQ=255)
                                                                                     aaaTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACcatcat    >  1:3458257/1‑93 (MQ=255)
                                                                                      aaTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATg   <  2:2164000/93‑1 (MQ=255)
                                                                                      aaTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATg   <  1:137411/93‑1 (MQ=255)
                                                                                       aTGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATgg  >  1:3790955/1‑93 (MQ=255)
                                                                                            |                                                                                        
AGAAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG  >  NC_000913/4039867‑4040047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTC  >  NC_000913/4039869‑4040053
                                                                                           |                                                                                             
AAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCC                                                                                            >  SRR4302533.170366/1‑94 (MQ=60)
AAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCC                                                                                            <  SRR4302533.5272045/94‑1 (MQ=60)
AAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCC                                                                                            <  SRR4302533.3793918/94‑1 (MQ=60)
 AGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCT                                                                                           <  SRR4302533.2616947/94‑1 (MQ=60)
 AGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCT                                                                                           >  SRR4302533.5511189/1‑94 (MQ=60)
  agcctcaaaacggcggctgtaaggcgttggcGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTT                                                                                          <  SRR4302533.2076314/63‑1 (MQ=60)
   ACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTC                                                                                         <  SRR4302533.238887/94‑1 (MQ=60)
   ACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTC                                                                                         <  SRR4302533.3950201/94‑1 (MQ=60)
    CTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCG                                                                                        <  SRR4302533.1841360/94‑1 (MQ=60)
     TTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCAGCAAAATCATCGTGAAATGAT‑ATCCTTCGT                                                                                       <  SRR4302533.78457/94‑1 (MQ=60)
       CAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCA                                                                                     >  SRR4302533.1328406/1‑94 (MQ=60)
        AAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGGCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAT                                                                                    >  SRR4302533.6296279/1‑94 (MQ=60)
        AAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAT                                                                                    <  SRR4302533.2012523/94‑1 (MQ=60)
        AAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCAT                                                                                    <  SRR4302533.4125028/94‑1 (MQ=60)
         AAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATT                                                                                   >  SRR4302533.768497/1‑94 (MQ=60)
          AACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTC                                                                                  >  SRR4302533.1559968/1‑94 (MQ=60)
          AACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTC                                                                                  <  SRR4302533.2903234/94‑1 (MQ=60)
             GGCGCTGTTGCGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTA                                                                               <  SRR4302533.2644926/94‑1 (MQ=60)
               CGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAT                                                                             >  SRR4302533.5929791/1‑94 (MQ=60)
               CGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAAT                                                                             >  SRR4302533.2522847/1‑94 (MQ=60)
                GCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATG                                                                            <  SRR4302533.1016974/94‑1 (MQ=60)
                GCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATG                                                                            >  SRR4302533.3290147/1‑94 (MQ=60)
                GCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATCAT‑ATCCTTCGTCATTCGTAATG                                                                            <  SRR4302533.3250010/94‑1 (MQ=60)
                 CTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGT                                                                           >  SRR4302533.640109/1‑94 (MQ=60)
                  TGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTT                                                                          >  SRR4302533.4930922/1‑94 (MQ=60)
                  TGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTT                                                                          >  SRR4302533.5186335/1‑94 (MQ=60)
                  TGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTT                                                                          >  SRR4302533.3451422/1‑94 (MQ=60)
                   GTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTT                                                                         <  SRR4302533.1553685/94‑1 (MQ=60)
                   GTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTT                                                                         >  SRR4302533.1152709/1‑94 (MQ=60)
                   GTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTT                                                                         >  SRR4302533.858280/1‑94 (MQ=60)
                    TTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTT                                                                        <  SRR4302533.2906554/94‑1 (MQ=60)
                    TTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTT                                                                        <  SRR4302533.3419045/94‑1 (MQ=60)
                    TTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTT                                                                        <  SRR4302533.1293509/94‑1 (MQ=60)
                     TACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTC                                                                       <  SRR4302533.4866975/94‑1 (MQ=60)
                     TACGCGCTCGCGGCGTAATCAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTC                                                                       <  SRR4302533.1926071/94‑1 (MQ=60)
                      ACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCC                                                                      <  SRR4302533.422629/94‑1 (MQ=60)
                      ACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCC                                                                      <  SRR4302533.3784855/94‑1 (MQ=60)
                      ACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCC                                                                      >  SRR4302533.6118025/1‑94 (MQ=60)
                        GCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAGTCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGG                                                                    <  SRR4302533.4461075/94‑1 (MQ=60)
                        GCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGG                                                                    <  SRR4302533.4789223/94‑1 (MQ=60)
                         CGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGA                                                                   <  SRR4302533.1866549/94‑1 (MQ=60)
                          GCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGAT                                                                  <  SRR4302533.3164811/94‑1 (MQ=60)
                          GCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGAT                                                                  >  SRR4302533.1811060/1‑94 (MQ=60)
                          GCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGAT                                                                  <  SRR4302533.1413752/94‑1 (MQ=60)
                          GCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGAT                                                                  >  SRR4302533.5974344/1‑94 (MQ=60)
                           CTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATG                                                                 <  SRR4302533.2601822/94‑1 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               >  SRR4302533.2413118/1‑94 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               <  SRR4302533.5185703/94‑1 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               <  SRR4302533.4527206/94‑1 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               <  SRR4302533.727148/94‑1 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               <  SRR4302533.2126003/94‑1 (MQ=60)
                             CGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGAT                                                               >  SRR4302533.5481673/1‑94 (MQ=60)
                              GCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATG                                                              <  SRR4302533.3773119/94‑1 (MQ=60)
                               CGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGG                                                             <  SRR4302533.437361/94‑1 (MQ=60)
                               CGGCGTAATTAAAAAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGG                                                             <  SRR4302533.787059/94‑1 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            <  SRR4302533.3262615/94‑1 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            <  SRR4302533.1573283/94‑1 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            <  SRR4302533.1279808/94‑1 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            >  SRR4302533.622179/1‑94 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            >  SRR4302533.2691552/1‑94 (MQ=60)
                                GGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGG                                                            <  SRR4302533.4611815/94‑1 (MQ=60)
                                  CGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAT                                                          <  SRR4302533.4657238/94‑1 (MQ=60)
                                  CGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAT                                                          >  SRR4302533.3725178/1‑94 (MQ=60)
                                  CGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAT                                                          >  SRR4302533.3341627/1‑94 (MQ=60)
                                  CGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAT                                                          <  SRR4302533.845808/94‑1 (MQ=60)
                                  CGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGAT                                                          <  SRR4302533.3210469/94‑1 (MQ=60)
                                   GTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATG                                                         >  SRR4302533.1565192/1‑94 (MQ=60)
                                   GTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATG                                                         <  SRR4302533.2523921/94‑1 (MQ=60)
                                   GTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATG                                                         >  SRR4302533.4578823/1‑94 (MQ=60)
                                   GTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATG                                                         >  SRR4302533.2399094/1‑94 (MQ=60)
                                    TAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGA                                                        >  SRR4302533.163324/1‑94 (MQ=60)
                                    TAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGA                                                        >  SRR4302533.4344035/1‑94 (MQ=60)
                                    TAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGA                                                        <  SRR4302533.1361976/94‑1 (MQ=60)
                                      ATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGAGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAAT                                                      >  SRR4302533.3402723/1‑94 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     >  SRR4302533.2014825/1‑94 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     >  SRR4302533.5512423/1‑94 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     <  SRR4302533.6265300/94‑1 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     <  SRR4302533.232119/94‑1 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     <  SRR4302533.2740031/94‑1 (MQ=60)
                                       TTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATACTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATA                                                     >  SRR4302533.5311145/1‑94 (MQ=60)
                                        TAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAA                                                    <  SRR4302533.3415627/94‑1 (MQ=60)
                                         AAAGTGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   >  SRR4302533.3099265/1‑94 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   <  SRR4302533.532042/94‑1 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   >  SRR4302533.196750/1‑94 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   >  SRR4302533.5903116/1‑94 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   >  SRR4302533.3256548/1‑94 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   >  SRR4302533.4824429/1‑94 (MQ=60)
                                         AAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAAC                                                   <  SRR4302533.6219144/94‑1 (MQ=60)
                                          AAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATCACA                                                  >  SRR4302533.3860055/1‑94 (MQ=60)
                                          AAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACA                                                  <  SRR4302533.337422/94‑1 (MQ=60)
                                           AGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAG                                                 >  SRR4302533.3392073/1‑94 (MQ=60)
                                           AGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAG                                                 <  SRR4302533.5928952/94‑1 (MQ=60)
                                           AGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAG                                                 <  SRR4302533.3127498/94‑1 (MQ=60)
                                            GAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGC                                                <  SRR4302533.1838315/94‑1 (MQ=60)
                                             AGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCG                                               >  SRR4302533.4547627/1‑94 (MQ=60)
                                             AGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCG                                               >  SRR4302533.3886736/1‑94 (MQ=60)
                                             AGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCG                                               <  SRR4302533.2526058/94‑1 (MQ=60)
                                              GTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGC                                              >  SRR4302533.551688/1‑94 (MQ=60)
                                              GTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGC                                              >  SRR4302533.7529/1‑94 (MQ=60)
                                              GTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGC                                              >  SRR4302533.4200375/1‑94 (MQ=60)
                                               TAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCT                                             <  SRR4302533.1272372/94‑1 (MQ=60)
                                               TAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCT                                             <  SRR4302533.2305331/94‑1 (MQ=60)
                                               TAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCT                                             >  SRR4302533.703576/1‑94 (MQ=60)
                                                 AAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTT                                           >  SRR4302533.1235939/1‑94 (MQ=60)
                                                  AAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTT                                          <  SRR4302533.1742958/94‑1 (MQ=60)
                                                    GCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTAT                                        >  SRR4302533.2014880/1‑94 (MQ=60)
                                                    ACTTGTAAGCGCCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTAC                                        <  SRR4302533.1874054/94‑1 (MQ=60)
                                                     CTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACT                                       >  SRR4302533.28202/1‑94 (MQ=60)
                                                     CTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACT                                       >  SRR4302533.430355/1‑94 (MQ=60)
                                                     CTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACT                                       <  SRR4302533.4151983/94‑1 (MQ=60)
                                                     CTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACT                                       >  SRR4302533.1978594/1‑94 (MQ=60)
                                                      TTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTT                                      >  SRR4302533.5881011/1‑94 (MQ=60)
                                                      TTGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTT                                      <  SRR4302533.24230/94‑1 (MQ=60)
                                                       TGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTT                                     <  SRR4302533.1874403/94‑1 (MQ=60)
                                                       TGTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTT                                     >  SRR4302533.3887337/1‑94 (MQ=60)
                                                        GTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTC                                    <  SRR4302533.4731939/94‑1 (MQ=60)
                                                        GTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTC                                    >  SRR4302533.5441117/1‑94 (MQ=60)
                                                        GTAAGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTC                                    >  SRR4302533.1737578/1‑94 (MQ=60)
                                                           AGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAG                                 >  SRR4302533.1189149/1‑94 (MQ=60)
                                                           AGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAG                                 >  SRR4302533.4315442/1‑94 (MQ=60)
                                                           AGCGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAG                                 <  SRR4302533.1669985/94‑1 (MQ=60)
                                                             CGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGAC                               <  SRR4302533.1598611/94‑1 (MQ=60)
                                                             CGGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGAC                               <  SRR4302533.5281100/94‑1 (MQ=60)
                                                              GGCGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACA                              >  SRR4302533.3012241/1‑94 (MQ=60)
                                                              GACGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGCAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACA                              <  SRR4302533.5416920/94‑1 (MQ=60)
                                                                CGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACT                            >  SRR4302533.1025974/1‑94 (MQ=60)
                                                                CGCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACT                            >  SRR4302533.781961/1‑94 (MQ=60)
                                                                 GCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTA                           >  SRR4302533.2596747/1‑94 (MQ=60)
                                                                 GCCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTA                           <  SRR4302533.2897065/94‑1 (MQ=60)
                                                                  CCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTAC                          <  SRR4302533.5452198/94‑1 (MQ=60)
                                                                  CCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTAC                          <  SRR4302533.103194/94‑1 (MQ=60)
                                                                  CCACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTACGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTAC                          >  SRR4302533.3858728/1‑94 (MQ=60)
                                                                    ACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAC                        >  SRR4302533.5904039/1‑94 (MQ=60)
                                                                    ACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAC                        >  SRR4302533.50195/1‑94 (MQ=60)
                                                                    ACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAC                        <  SRR4302533.2185661/94‑1 (MQ=60)
                                                                    ACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAC                        <  SRR4302533.2132878/94‑1 (MQ=60)
                                                                    ACCAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACAC                        >  SRR4302533.4442177/1‑94 (MQ=60)
                                                                      CAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCC                      <  SRR4302533.4406336/94‑1 (MQ=60)
                                                                      CAAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCC                      <  SRR4302533.4303209/94‑1 (MQ=60)
                                                                       AAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCG                     >  SRR4302533.4367695/1‑94 (MQ=60)
                                                                       AAAATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCG                     >  SRR4302533.3343245/1‑94 (MQ=60)
                                                                        AAATCATGGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGG                    <  SRR4302533.5836720/94‑1 (MQ=60)
                                                                         AATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACGCCCGGA                   <  SRR4302533.1465375/94‑1 (MQ=60)
                                                                         AATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGA                   <  SRR4302533.1451430/94‑1 (MQ=60)
                                                                         AATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGA                   <  SRR4302533.4646806/94‑1 (MQ=60)
                                                                          ATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAT                  >  SRR4302533.1712577/1‑94 (MQ=60)
                                                                          ATCATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGAT                  >  SRR4302533.6249101/1‑94 (MQ=60)
                                                                            CATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATAC                <  SRR4302533.4318624/94‑1 (MQ=60)
                                                                            CATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATAC                >  SRR4302533.2320117/1‑94 (MQ=60)
                                                                             ATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACC               >  SRR4302533.5312623/1‑94 (MQ=60)
                                                                             ATCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACC               >  SRR4302533.4354842/1‑94 (MQ=60)
                                                                              TCGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGATTTTACTTTCCAGACACTACACCCGGATACCT              >  SRR4302533.4824914/1‑94 (MQ=60)
                                                                               CGTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCAT             <  SRR4302533.3071407/94‑1 (MQ=60)
                                                                                GTGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATC            <  SRR4302533.5810589/94‑1 (MQ=60)
                                                                                 TGAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCA           >  SRR4302533.4349400/1‑94 (MQ=60)
                                                                                  GAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCAT          <  SRR4302533.3482470/94‑1 (MQ=60)
                                                                                  GAAATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCAT          >  SRR4302533.3479606/1‑94 (MQ=60)
                                                                                    AATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG        <  SRR4302533.138282/94‑1 (MQ=60)
                                                                                    AATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGG        >  SRR4302533.3814167/1‑94 (MQ=60)
                                                                                     ATGAT‑ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGA       >  SRR4302533.6151034/1‑94 (MQ=60)
                                                                                      TGAT‑ATCCTTCGTCATTCGTAATGTTTCCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGAC      <  SRR4302533.1855464/94‑1 (MQ=60)
                                                                                         atATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGC    >  SRR4302533.2257089/3‑94 (MQ=60)
                                                                                          TATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCT   <  SRR4302533.492800/94‑1 (MQ=60)
                                                                                           ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTC  >  SRR4302533.1380485/1‑94 (MQ=60)
                                                                                           ATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTC  >  SRR4302533.2040886/1‑94 (MQ=60)
                                                                                           |                                                                                             
AAGACTTCAAAACGGCGCTGTTACGCGCTCGCGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCCACCAAAATCATCGTGAAATGATAATCCTTCGTCATTCGTAATGTTTTCCGGATGATGGGATGAATAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTC  >  NC_000913/4039869‑4040053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑