Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,120,575 |
T→C |
T115T (ACA→ACG) |
ftsN ← |
essential cell division protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,120,575 | 0 | T | C | 99.5%
| 700.2
/ NA
| 219 | T115T (ACA→ACG) | ftsN | essential cell division protein |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (119/99); total (119/100) |
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 224 total aligned reads displayed.
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120486‑4120664
|
gTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTc > 2:285725/1‑93 (MQ=255)
tCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCa > 2:6182845/1‑93 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt < 1:1011760/93‑1 (MQ=255)
tGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGt > 2:6291241/1‑93 (MQ=255)
gTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGtt < 1:5996843/93‑1 (MQ=255)
gTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAG‑CTGCATTTGGTCAAGAAGCTGACGGTGTTCTGGGGTCAGTTg > 1:5268274/1‑93 (MQ=255)
ttCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTg > 1:945678/1‑93 (MQ=255)
ttCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTg > 2:1823034/1‑93 (MQ=255)
tCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGc < 2:5411753/93‑1 (MQ=255)
cATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCt > 1:3987554/1‑93 (MQ=255)
cATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCt > 2:5423409/1‑93 (MQ=255)
aTTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTc > 2:3756649/1‑93 (MQ=255)
ttCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTcc < 2:1455911/93‑1 (MQ=255)
tCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCg > 2:4079648/1‑93 (MQ=255)
tCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCg < 1:3330712/93‑1 (MQ=255)
cACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGc > 1:5862266/1‑93 (MQ=255)
aCGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCg < 2:5930833/93‑1 (MQ=255)
cTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttca > 2:2916132/1‑93 (MQ=255)
ttCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcac < 2:5270323/93‑1 (MQ=255)
ttCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcac < 1:3732134/93‑1 (MQ=255)
tCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcact > 2:5023438/1‑93 (MQ=255)
tCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcact < 1:4718069/93‑1 (MQ=255)
aCCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttca > 1:6094580/1‑93 (MQ=255)
aCCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttca < 1:66055/93‑1 (MQ=255)
ccAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTttcacttcac > 1:4916634/1‑93 (MQ=255)
aGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcacca > 2:5522195/1‑93 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGCAGTAGTTCTGGCGTCCGTTGCTCCGGCGTTTTCACTTcacaac > 1:1784752/1‑93 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcaccac < 2:5498383/93‑1 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcaccac > 2:1538069/1‑93 (MQ=255)
gCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTcaccac < 1:5064307/93‑1 (MQ=255)
cTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCaccacc < 1:3796580/93‑1 (MQ=255)
cTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCaccacc < 1:437909/93‑1 (MQ=255)
tGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCg > 2:325870/1‑93 (MQ=255)
gCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCgg > 1:1136136/1‑93 (MQ=255)
gCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCgg > 2:4476440/1‑93 (MQ=255)
gTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCa > 2:3333302/1‑93 (MQ=255)
ttGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAg > 1:6269661/1‑93 (MQ=255)
ttGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAg < 1:2375418/93‑1 (MQ=255)
tGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGa < 1:301329/93‑1 (MQ=255)
tGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGa < 2:4354846/93‑1 (MQ=255)
gctgctGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAg < 2:920685/93‑1 (MQ=255)
tgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCt < 2:6106806/93‑1 (MQ=255)
tgGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCt > 1:1547109/1‑93 (MQ=255)
ggCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtg < 1:1420852/93‑1 (MQ=255)
ggCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtg < 2:3001971/93‑1 (MQ=255)
cgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgtg < 1:5941044/93‑1 (MQ=255)
cgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgtg < 1:1485450/93‑1 (MQ=255)
cgcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCtgtg < 1:716800/93‑1 (MQ=255)
gcATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTgg > 1:2173724/1‑93 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg > 1:1316945/1‑93 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg > 1:621512/1‑93 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg > 1:3127994/1‑93 (MQ=255)
tatCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcg < 1:3638795/93‑1 (MQ=255)
atCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcgc > 2:848453/1‑93 (MQ=255)
atCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGgcgc < 1:3873631/93‑1 (MQ=255)
tCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgca < 1:2977182/93‑1 (MQ=255)
tCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgca > 2:1097144/1‑93 (MQ=255)
aGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacg > 1:5204052/1‑93 (MQ=255)
aGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacg > 2:4950351/1‑93 (MQ=255)
gCCTGCATTTGTTCAAGAAGCTGACGTTGTTCNGGNGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGcgcacgc < 2:4916573/93‑1 (MQ=255)
cTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCgcacgcac > 2:5586353/1‑93 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 1:2094082/1‑93 (MQ=255)
tGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACt > 1:4265225/1‑93 (MQ=255)
cATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTcc < 2:2679363/93‑1 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 1:2034397/1‑93 (MQ=255)
aTTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTccc > 2:4737014/1‑93 (MQ=255)
tttGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCg > 2:21147/1‑93 (MQ=255)
tttGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCg < 2:4807478/93‑1 (MQ=255)
tttGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCg > 1:2613196/1‑93 (MQ=255)
gTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCt < 1:256105/93‑1 (MQ=255)
tCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTgg > 1:2552330/1‑93 (MQ=255)
tCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTgg > 2:3057520/1‑93 (MQ=255)
aagaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCg > 2:4982527/1‑93 (MQ=255)
aagaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCg > 2:1592222/1‑93 (MQ=255)
agaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGa > 2:4928778/1‑93 (MQ=255)
gaagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGAc < 1:2561725/93‑1 (MQ=255)
aagCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACt > 2:4313488/1‑93 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACtt > 2:1653795/1‑93 (MQ=255)
agCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACtt < 2:4244525/93‑1 (MQ=255)
gCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACttt > 1:1594665/1‑93 (MQ=255)
gCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACttt > 1:358331/1‑93 (MQ=255)
tGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTcc < 1:300805/93‑1 (MQ=255)
tGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTcc < 1:474559/93‑1 (MQ=255)
tGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTcc > 2:3675729/1‑93 (MQ=255)
gACGTGGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGACTGGCGACTTTCCa < 2:3221373/93‑1 (MQ=255)
aCGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAg > 2:3206872/1‑93 (MQ=255)
aCGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAg > 1:4408368/1‑93 (MQ=255)
cGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGc < 1:4855304/93‑1 (MQ=255)
gttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGct > 2:2503196/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc > 2:2610394/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc > 1:3900428/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc > 2:5785689/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc > 1:915504/1‑93 (MQ=255)
ttgttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGctc < 1:2861802/93‑1 (MQ=255)
ttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCttt > 1:2283732/1‑93 (MQ=255)
ttCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCttt < 2:711708/93‑1 (MQ=255)
cTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTaa < 1:448026/93‑1 (MQ=255)
cTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTaa > 1:5665310/1‑93 (MQ=255)
tGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAt < 2:1226857/93‑1 (MQ=255)
tGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCATTAAt < 2:3993021/93‑1 (MQ=255)
|
GTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT > NC_000913/4120486‑4120664
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120482‑4120668
|
CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGC < SRR4302533.4839046/94‑1 (MQ=60)
GGCGTCTGTGCATTCCACGGAACTTGACCCAGCGGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCG < SRR4302533.5805108/94‑1 (MQ=60)
GCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGT < SRR4302533.3964779/94‑1 (MQ=60)
CGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTC > SRR4302533.1537822/1‑94 (MQ=60)
TCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAG < SRR4302533.2068919/94‑1 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT < SRR4302533.1017681/94‑1 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTT > SRR4302533.5216789/1‑94 (MQ=60)
TGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAG‑CTGCATTTGGTCAAGAAGCTGACGGTGTTCTGGGGTCAGTTG > SRR4302533.5299877/1‑94 (MQ=60)
GTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTG > SRR4302533.951239/1‑94 (MQ=60)
GTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTG < SRR4302533.6033164/94‑1 (MQ=60)
TTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGC < SRR4302533.4053559/94‑1 (MQ=60)
TCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCT > SRR4302533.4011844/1‑94 (MQ=60)
CATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTC > SRR4302533.2960622/1‑94 (MQ=60)
TTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCG < SRR4302533.5365952/94‑1 (MQ=60)
TTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCG > SRR4302533.3687597/1‑94 (MQ=60)
TCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGG < SRR4302533.3351300/94‑1 (MQ=60)
CCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGC > SRR4302533.5897710/1‑94 (MQ=60)
CACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCG < SRR4302533.3012728/94‑1 (MQ=60)
ACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGT > SRR4302533.1712131/1‑94 (MQ=60)
ACGGAACTTCAACCAGCTACGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGT > SRR4302533.944885/1‑94 (MQ=60)
CGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTT > SRR4302533.5905950/1‑94 (MQ=60)
GGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTT < SRR4302533.2328098/94‑1 (MQ=60)
TTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACT < SRR4302533.3755029/94‑1 (MQ=60)
TTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACT < SRR4302533.3942117/94‑1 (MQ=60)
TCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTT < SRR4302533.4746679/94‑1 (MQ=60)
AACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCA > SRR4302533.6131400/1‑94 (MQ=60)
AACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCA < SRR4302533.2574783/94‑1 (MQ=60)
ACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCAC < SRR4302533.66481/94‑1 (MQ=60)
ACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCAC > SRR4302533.4946415/1‑94 (MQ=60)
CCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACC < SRR4302533.218894/94‑1 (MQ=60)
CAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCA < SRR4302533.713491/94‑1 (MQ=60)
AGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGCAGTAGTTCTGGCGTCCGTTGCTCCGGCGTTTTCACTTCACAAC > SRR4302533.1795604/1‑94 (MQ=60)
GCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACC < SRR4302533.5094900/94‑1 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG > SRR4302533.3809879/1‑94 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG < SRR4302533.3819819/94‑1 (MQ=60)
CTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCG < SRR4302533.440517/94‑1 (MQ=60)
TGCGTTGGCTGCTTGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGG < SRR4302533.3628248/94‑1 (MQ=60)
TGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGG > SRR4302533.1142890/1‑94 (MQ=60)
GTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAG < SRR4302533.3417494/94‑1 (MQ=60)
GTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAG > SRR4302533.6307121/1‑94 (MQ=60)
GTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAG > SRR4302533.2083637/1‑94 (MQ=60)
GTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAG < SRR4302533.6275529/94‑1 (MQ=60)
TTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGA < SRR4302533.2390117/94‑1 (MQ=60)
TGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAA < SRR4302533.303171/94‑1 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT > SRR4302533.1534033/1‑94 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT < SRR4302533.3299789/94‑1 (MQ=60)
TGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTT > SRR4302533.4962825/1‑94 (MQ=60)
GCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTC < SRR4302533.2866813/94‑1 (MQ=60)
CTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCT > SRR4302533.1556432/1‑94 (MQ=60)
GGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGT < SRR4302533.1429447/94‑1 (MQ=60)
GGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGT > SRR4302533.1371493/1‑94 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302533.4685333/94‑1 (MQ=60)
GCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTG < SRR4302533.5710297/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302533.4144105/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG > SRR4302533.4342637/1‑94 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302533.1053903/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302533.5976971/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302533.721026/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG < SRR4302533.1494417/94‑1 (MQ=60)
CGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGG > SRR4302533.2187119/1‑94 (MQ=60)
GCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGG > SRR4302533.2536485/1‑94 (MQ=60)
GCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGG > SRR4302533.3027663/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTTCGGCGCTTTCACTTCACCACCGCAAGAAGGTTCTGTGGGCG > SRR4302533.2128798/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302533.1324846/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302533.571265/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302533.3147221/1‑94 (MQ=60)
ATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCG > SRR4302533.625162/1‑94 (MQ=60)
TATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGC < SRR4302533.3661169/94‑1 (MQ=60)
ATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCA < SRR4302533.3897277/94‑1 (MQ=60)
ATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCA > SRR4302533.3039982/1‑94 (MQ=60)
TCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCAC < SRR4302533.2995396/94‑1 (MQ=60)
CAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACG > SRR4302533.5235410/1‑94 (MQ=60)
AGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGC > SRR4302533.1593112/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC > SRR4302533.4960302/1‑94 (MQ=60)
CCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCAC < SRR4302533.442407/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGGACGCACT > SRR4302533.1477742/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT > SRR4302533.6198919/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT > SRR4302533.4290910/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT > SRR4302533.2106978/1‑94 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACT < SRR4302533.262282/94‑1 (MQ=60)
CTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCAACGGCAGAAGGTTCTGTGGGCGCACGCACT > SRR4302533.6332343/1‑94 (MQ=60)
TGCATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTC > SRR4302533.3910756/1‑94 (MQ=60)
CATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCC > SRR4302533.2046947/1‑94 (MQ=60)
ATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCG > SRR4302533.2629236/1‑94 (MQ=60)
ATTTGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCG < SRR4302533.4806567/94‑1 (MQ=60)
TGTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCT < SRR4302533.1002966/94‑1 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG < SRR4302533.2468313/94‑1 (MQ=60)
GTTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTG < SRR4302533.257669/94‑1 (MQ=60)
TTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGG > SRR4302533.1145687/1‑94 (MQ=60)
TTCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGG > SRR4302533.2568035/1‑94 (MQ=60)
TCAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGC < SRR4302533.5288564/94‑1 (MQ=60)
CAAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGGTCTGTGGGCGCACGCACTCCCGGCTGGCG > SRR4302533.4915684/1‑94 (MQ=60)
AAGAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGA > SRR4302533.1952413/1‑94 (MQ=60)
GAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACT < SRR4302533.4768142/94‑1 (MQ=60)
GAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACT < SRR4302533.2577498/94‑1 (MQ=60)
GAAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACT < SRR4302533.38737/94‑1 (MQ=60)
AAGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTT < SRR4302533.6061325/94‑1 (MQ=60)
AGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTT > SRR4302533.1604315/1‑94 (MQ=60)
AGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTT > SRR4302533.360514/1‑94 (MQ=60)
AGCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTT > SRR4302533.3090553/1‑94 (MQ=60)
GCTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTC < SRR4302533.6002032/94‑1 (MQ=60)
CTGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCC < SRR4302533.287474/94‑1 (MQ=60)
TGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCA < SRR4302533.302644/94‑1 (MQ=60)
TGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCA > SRR4302533.257697/1‑94 (MQ=60)
TGACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCA < SRR4302533.477393/94‑1 (MQ=60)
GACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAG > SRR4302533.4434991/1‑94 (MQ=60)
ACGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGC > SRR4302533.6161816/1‑94 (MQ=60)
CGTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCT < SRR4302533.4884728/94‑1 (MQ=60)
GTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTC > SRR4302533.920883/1‑94 (MQ=60)
GTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTC > SRR4302533.3924236/1‑94 (MQ=60)
GTTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTC > SRR4302533.805852/1‑94 (MQ=60)
TTGTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCT < SRR4302533.2879405/94‑1 (MQ=60)
GTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTT > SRR4302533.2297867/1‑94 (MQ=60)
GTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTT < SRR4302533.4618084/94‑1 (MQ=60)
GTTCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTACAGCTCTTT > SRR4302533.4464731/1‑94 (MQ=60)
TCTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAA > SRR4302533.5699538/1‑94 (MQ=60)
CTGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAAT < SRR4302533.450705/94‑1 (MQ=60)
TGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATG < SRR4302533.3701018/94‑1 (MQ=60)
TGGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATG < SRR4302533.902458/94‑1 (MQ=60)
GGCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGT > SRR4302533.508076/1‑94 (MQ=60)
GCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTA < SRR4302533.2230056/94‑1 (MQ=60)
GCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTA < SRR4302533.827324/94‑1 (MQ=60)
GCGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGCGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTA < SRR4302533.372082/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTATTGTAG > SRR4302533.4327240/1‑94 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG < SRR4302533.4968179/94‑1 (MQ=60)
CGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG < SRR4302533.3583871/94‑1 (MQ=60)
|
CGGCGTCTGTTCATTCCACGGAACTTCAACCAGCTGCGTTGGCTGCTGGCGCATATCAGCCTGCATTTGTTCAAGAAGCTGACGTTGTTCTGGTGTCAGTTGCTCCGGCGTTTTCACTTCACCACCGGCAGAAGGTTCTGTGGGCGCACGCACTCCCGGCTGGCGACTTTCCAGCTCTTTAATGTAG > NC_000913/4120482‑4120668
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
