Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,146,393 |
A→G |
R484R (CGT→CGC) |
yijP ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,146,393 | 0 | A | G | 100.0%
| 720.8
/ NA
| 223 | R484R (CGT→CGC) | yijP | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (101/122); total (101/122) |
Only 100 of 237 total aligned reads displayed.
TTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGACGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGA > NC_000913/4146303‑4146481
|
ttACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGTCATTTTTCTGGCGTCCACCGCAGGAACGGAATGGTGTGCATATGgcgc > 2:2917104/1‑93 (MQ=255)
ttACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGgcgc > 2:5893358/1‑93 (MQ=255)
ttACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGgcgc < 2:1901127/93‑1 (MQ=255)
ttACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGgcgc < 2:1532994/93‑1 (MQ=255)
cGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTc < 2:6192334/93‑1 (MQ=255)
cGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTc < 1:5250395/93‑1 (MQ=255)
cGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTc > 1:4745098/1‑93 (MQ=255)
gATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCg > 1:2452382/1‑93 (MQ=255)
aTCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCgg < 2:3392362/93‑1 (MQ=255)
tCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCggg < 2:6305369/93‑1 (MQ=255)
cAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGt < 1:69563/93‑1 (MQ=255)
cAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGt > 2:639809/1‑93 (MQ=255)
aaCATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGtt > 2:750576/1‑93 (MQ=255)
aaCATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGtt < 2:3654715/93‑1 (MQ=255)
aaCATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGtt < 1:4844588/93‑1 (MQ=255)
tCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTcc < 1:5356900/93‑1 (MQ=255)
tCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTcc < 2:5180941/93‑1 (MQ=255)
tGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCa > 1:2545924/1‑93 (MQ=255)
tGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCa > 1:1546718/1‑93 (MQ=255)
gagaAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGCACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCAttc > 1:408621/1‑92 (MQ=255)
gagaAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTa < 1:2744740/93‑1 (MQ=255)
gagaAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTa < 1:3558151/93‑1 (MQ=255)
gaAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACg > 1:387173/1‑93 (MQ=255)
tCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGcccc < 2:2327725/93‑1 (MQ=255)
ggggATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAg > 2:5679205/1‑93 (MQ=255)
gggATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGt < 1:3667149/93‑1 (MQ=255)
gggATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGt < 1:2689906/93‑1 (MQ=255)
ggATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGtt < 1:4931719/93‑1 (MQ=255)
ggATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGtt > 1:315649/1‑93 (MQ=255)
gATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGttt < 2:3697047/93‑1 (MQ=255)
gATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGttt < 1:4305642/93‑1 (MQ=255)
gATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGttt < 2:3563666/93‑1 (MQ=255)
aTGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGtttt < 1:1037384/93‑1 (MQ=255)
gAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgt < 1:5518549/93‑1 (MQ=255)
gAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgt > 1:4268809/1‑93 (MQ=255)
gAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgt < 2:288563/93‑1 (MQ=255)
gAGTCGCTTGCCATTTTTCTGACGGCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgt > 2:3612448/1‑93 (MQ=255)
aGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGTATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgtg > 1:4551158/1‑93 (MQ=255)
aGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgtg < 2:2703273/93‑1 (MQ=255)
aGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTtgtg < 1:3293135/93‑1 (MQ=255)
gTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgc > 1:1222160/1‑93 (MQ=255)
gTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgc > 2:457764/1‑93 (MQ=255)
cGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcgg > 2:5583209/1‑93 (MQ=255)
gCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggc > 2:4900438/1‑93 (MQ=255)
gCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggc > 2:1637671/1‑93 (MQ=255)
gCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggc < 1:1979950/93‑1 (MQ=255)
gCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggc > 2:4174422/1‑93 (MQ=255)
ttGCGATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggcgg > 1:3741636/1‑93 (MQ=255)
ttGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggcgg < 2:1368549/93‑1 (MQ=255)
tGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTgcggcggc > 2:33102/1‑93 (MQ=255)
cATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCgtg < 1:88174/93‑1 (MQ=255)
aTTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCgtgt > 2:5295553/1‑93 (MQ=255)
aTTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCgtgt > 1:2106611/1‑93 (MQ=255)
tttttCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTc < 1:3523010/93‑1 (MQ=255)
tttttCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTc > 2:609378/1‑93 (MQ=255)
ttttCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCg < 2:3225759/93‑1 (MQ=255)
tttCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGt > 2:1807163/1‑93 (MQ=255)
tttCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGt < 2:5086023/93‑1 (MQ=255)
gACGTCCGGAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAAcc > 2:6199594/1‑93 (MQ=255)
gACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAAcc > 2:898243/1‑93 (MQ=255)
aCGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACct < 2:2066195/93‑1 (MQ=255)
gTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACctct > 2:1231879/1‑93 (MQ=255)
tCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCtt < 1:1873915/93‑1 (MQ=255)
tCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCtt > 1:1743113/1‑93 (MQ=255)
tCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCtt < 1:4462745/93‑1 (MQ=255)
acaGCAGGAACGGAATGGTGTACATATGGGGCGTCGGGATGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCAc > 2:5849488/1‑93 (MQ=255)
agcagGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCg > 2:5058113/1‑93 (MQ=255)
agcagGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCg > 1:1110827/1‑93 (MQ=255)
cagGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTg > 1:3420130/1‑93 (MQ=255)
cagGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTg > 1:5798388/1‑93 (MQ=255)
cagGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTg < 1:5614785/93‑1 (MQ=255)
ggAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGt > 1:1458680/1‑93 (MQ=255)
ggAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGt > 1:2697313/1‑93 (MQ=255)
ggAACGGAATGGTGTACATATGGCGCGTCGGGTTGGCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAGCCTCTTCACCGTGGt < 2:3093309/93‑1 (MQ=255)
ggAACGGAATGGAGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTggg > 2:1934256/1‑92 (MQ=255)
gAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTc > 1:1496565/1‑93 (MQ=255)
gAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTc < 2:2018786/93‑1 (MQ=255)
gAACGGAATGGTGTACATATGGCGCGTCGGGGTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTc > 1:6149432/1‑93 (MQ=255)
aaCGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCa > 1:2287061/1‑93 (MQ=255)
aCGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCag < 2:580166/93‑1 (MQ=255)
atcgtgtACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGaaa < 2:1113547/90‑1 (MQ=255)
aTGGTTTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGaaa < 1:3138305/93‑1 (MQ=255)
aTGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGaaa > 2:3333208/1‑93 (MQ=255)
aTGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGaaa < 1:2941118/93‑1 (MQ=255)
tGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAt > 1:5918616/1‑93 (MQ=255)
tGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAt < 1:2219746/93‑1 (MQ=255)
ggTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATa > 1:3173763/1‑93 (MQ=255)
ggTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATa < 2:4051892/93‑1 (MQ=255)
ggTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATa < 2:316718/93‑1 (MQ=255)
gtgtACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATaa > 2:2763517/1‑93 (MQ=255)
gtgtACATATGGCGCGTCAGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATaa > 2:1336413/1‑93 (MQ=255)
tgtACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATaaa < 2:4035754/93‑1 (MQ=255)
gtACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAAc > 2:693557/1‑93 (MQ=255)
tACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAAcc < 2:380642/93‑1 (MQ=255)
aCATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCa < 1:3581977/93‑1 (MQ=255)
aCATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCa < 2:5922233/93‑1 (MQ=255)
cATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAg < 1:5199408/93‑1 (MQ=255)
atatGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAgg < 1:2917411/93‑1 (MQ=255)
atatGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAgg > 2:2507091/1‑93 (MQ=255)
tatGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGa > 2:5392814/1‑93 (MQ=255)
|
TTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGACGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGA > NC_000913/4146303‑4146481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGACGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAAACC > NC_000913/4146300‑4146485
|
GTATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGG > SRR4302533.5089642/1‑94 (MQ=60)
GTATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGG > SRR4302533.2211229/1‑94 (MQ=60)
GTATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGG < SRR4302533.1947815/94‑1 (MQ=60)
GATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGC < SRR4302533.5853738/94‑1 (MQ=60)
ATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCG < SRR4302533.2953076/94‑1 (MQ=60)
ATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCG > SRR4302533.514676/1‑94 (MQ=60)
ACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTC > SRR4302533.4773867/1‑94 (MQ=60)
CGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCG < SRR4302533.5281948/94‑1 (MQ=60)
CGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCG > SRR4302533.2467518/1‑94 (MQ=60)
GATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGG > SRR4302533.3189726/1‑94 (MQ=60)
CAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTT < SRR4302533.2709319/94‑1 (MQ=60)
CAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTT < SRR4302533.70018/94‑1 (MQ=60)
AACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTG < SRR4302533.4873951/94‑1 (MQ=60)
ACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGT < SRR4302533.3558685/94‑1 (MQ=60)
ACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGT < SRR4302533.3558684/94‑1 (MQ=60)
ACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGT > SRR4302533.3911301/1‑94 (MQ=60)
TCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCT < SRR4302533.2253847/94‑1 (MQ=60)
TCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCT > SRR4302533.4837114/1‑94 (MQ=60)
TCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCT < SRR4302533.5389056/94‑1 (MQ=60)
CCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTC < SRR4302533.2503197/94‑1 (MQ=60)
CCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTC > SRR4302533.5118373/1‑94 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTTCTCA > SRR4302533.3297920/1‑94 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA < SRR4302533.4531343/94‑1 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA > SRR4302533.2561588/1‑94 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA < SRR4302533.4300252/94‑1 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA < SRR4302533.3762242/94‑1 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA > SRR4302533.1556039/1‑94 (MQ=60)
CTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCA > SRR4302533.3599659/1‑94 (MQ=60)
TGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCAT < SRR4302533.4263016/94‑1 (MQ=60)
CGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGCACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTC > SRR4302533.411074/1‑94 (MQ=60)
GAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTAC < SRR4302533.2761564/94‑1 (MQ=60)
GAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTAC < SRR4302533.5439081/94‑1 (MQ=60)
GAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTAC < SRR4302533.3580077/94‑1 (MQ=60)
AGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACG > SRR4302533.389508/1‑94 (MQ=60)
GAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGC > SRR4302533.1980483/1‑94 (MQ=60)
AATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCC < SRR4302533.2039115/94‑1 (MQ=60)
CACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCACTACGCCCCTG > SRR4302533.2927780/1‑94 (MQ=60)
CGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAG < SRR4302533.152459/94‑1 (MQ=60)
GGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTT > SRR4302533.317576/1‑94 (MQ=60)
GGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTT < SRR4302533.3689690/94‑1 (MQ=60)
GGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTT < SRR4302533.2706397/94‑1 (MQ=60)
GGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTT < SRR4302533.4961585/94‑1 (MQ=60)
GATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTT > SRR4302533.1283971/1‑94 (MQ=60)
GATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTT < SRR4302533.6307601/94‑1 (MQ=60)
GATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTT < SRR4302533.4331549/94‑1 (MQ=60)
GATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTT < SRR4302533.2216422/94‑1 (MQ=60)
GATGAGTCGCTTGCCAGTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCTGGTTGTCCTCATTACGCCCCTGAGTTTT < SRR4302533.818637/94‑1 (MQ=60)
ATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTG < SRR4302533.1043482/94‑1 (MQ=60)
ATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGCTGTCCTCATTACGCCCCTGAGTTTTG > SRR4302533.2867280/1‑94 (MQ=60)
TGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGT < SRR4302533.5866193/94‑1 (MQ=60)
TGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGT > SRR4302533.4294507/1‑94 (MQ=60)
TGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGT < SRR4302533.3433186/94‑1 (MQ=60)
GAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGTATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTG > SRR4302533.4578757/1‑94 (MQ=60)
GAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTG < SRR4302533.5551871/94‑1 (MQ=60)
AGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGC > SRR4302533.1229489/1‑94 (MQ=60)
AGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGC > SRR4302533.5310293/1‑94 (MQ=60)
AGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGC < SRR4302533.479478/94‑1 (MQ=60)
AGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGC < SRR4302533.3313463/94‑1 (MQ=60)
AGTCGCTTGCCATTGTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGC < SRR4302533.3051782/94‑1 (MQ=60)
TCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGG < SRR4302533.5679898/94‑1 (MQ=60)
TCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGG > SRR4302533.1852231/1‑94 (MQ=60)
CGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGG > SRR4302533.1400029/1‑94 (MQ=60)
GCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCG < SRR4302533.5265839/94‑1 (MQ=60)
GCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCG < SRR4302533.1992074/94‑1 (MQ=60)
GCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCG > SRR4302533.6113617/1‑94 (MQ=60)
GCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCG < SRR4302533.6256650/94‑1 (MQ=60)
GCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCG > SRR4302533.5528118/1‑94 (MQ=60)
CTTGCGATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGG > SRR4302533.3764582/1‑94 (MQ=60)
CTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGG < SRR4302533.3047745/94‑1 (MQ=60)
TGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCG < SRR4302533.2356744/94‑1 (MQ=60)
TGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCCGAGTTTTGTGCGGCGGCG > SRR4302533.3444650/1‑94 (MQ=60)
GCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGT > SRR4302533.1712190/1‑94 (MQ=60)
CATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGT < SRR4302533.88737/94‑1 (MQ=60)
CATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGT > SRR4302533.2119601/1‑94 (MQ=60)
TTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCG < SRR4302533.3544725/94‑1 (MQ=60)
TTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCG < SRR4302533.3161152/94‑1 (MQ=60)
TGACGTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACC > SRR4302533.4895304/1‑94 (MQ=60)
GTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTT > SRR4302533.1753710/1‑94 (MQ=60)
GTCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTT < SRR4302533.4398132/94‑1 (MQ=60)
TCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTC < SRR4302533.3691818/94‑1 (MQ=60)
TCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTC < SRR4302533.1885334/94‑1 (MQ=60)
TCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTC > SRR4302533.2643002/1‑94 (MQ=60)
TCCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTC < SRR4302533.4489738/94‑1 (MQ=60)
CCACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCA > SRR4302533.1147844/1‑94 (MQ=60)
CACAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCAC > SRR4302533.4342508/1‑94 (MQ=60)
CAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCG > SRR4302533.2685177/1‑94 (MQ=60)
CAGCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCG > SRR4302533.1117417/1‑94 (MQ=60)
GCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTG > SRR4302533.3441262/1‑94 (MQ=60)
GCAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTG > SRR4302533.5833419/1‑94 (MQ=60)
CAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGG < SRR4302533.5648722/94‑1 (MQ=60)
CAGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGG < SRR4302533.1500875/94‑1 (MQ=60)
AGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGT > SRR4302533.1467475/1‑94 (MQ=60)
AGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGT > SRR4302533.2713839/1‑94 (MQ=60)
AGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGT > SRR4302533.5902252/1‑94 (MQ=60)
AGGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTCCACCGTGGT > SRR4302533.3984983/1‑94 (MQ=60)
GGAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTC > SRR4302533.1505579/1‑94 (MQ=60)
GGAACGGAATGGTGTACATATGGCGCGTCGGGGTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTC > SRR4302533.6186448/1‑94 (MQ=60)
GAACGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCA > SRR4302533.2301215/1‑94 (MQ=60)
CGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAG < SRR4302533.5598822/94‑1 (MQ=60)
CGGAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAG < SRR4302533.272183/94‑1 (MQ=60)
GAATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAA < SRR4302533.1078825/94‑1 (MQ=60)
AATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAA > SRR4302533.3874815/1‑94 (MQ=60)
ATGGTTTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAT < SRR4302533.3157599/94‑1 (MQ=60)
ATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAT > SRR4302533.5954386/1‑94 (MQ=60)
ATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAT > SRR4302533.2958484/1‑94 (MQ=60)
ATGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAAT < SRR4302533.2959080/94‑1 (MQ=60)
TGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATA > SRR4302533.3193297/1‑94 (MQ=60)
TGGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATA < SRR4302533.2233449/94‑1 (MQ=60)
GGTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAA < SRR4302533.4677429/94‑1 (MQ=60)
GTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAA < SRR4302533.823466/94‑1 (MQ=60)
GTGTACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGATCAGAGAAATAAA > SRR4302533.3621909/1‑94 (MQ=60)
TACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCA < SRR4302533.17211/94‑1 (MQ=60)
TACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCA > SRR4302533.3274806/1‑94 (MQ=60)
TCATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTAGTGCGGCGGCGTGTCGTAAACCTCTTCTCCGTGGTCAGAGAAATAAACCAG < SRR4302533.2014752/94‑1 (MQ=60)
ACATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAG < SRR4302533.3604041/94‑1 (MQ=60)
CATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGG < SRR4302533.5230756/94‑1 (MQ=60)
ATATGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGA < SRR4302533.2935294/94‑1 (MQ=60)
TATGGCGCTTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAA < SRR4302533.2249763/94‑1 (MQ=60)
TGGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGGCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAAAC > SRR4302533.2824394/1‑94 (MQ=60)
GGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAAACC < SRR4302533.1602270/94‑1 (MQ=60)
GGCGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAAACC < SRR4302533.675943/94‑1 (MQ=60)
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GTATTTACGATCAACATCCTGCGAGAAATCACGGGGATGAGTCGCTTGCCATTTTTCTGACGTCCACAGCAGGAACGGAATGGTGTACATATGACGCGTCGGGTTGTCCTCATTACGCCCCTGAGTTTTGTGCGGCGGCGTGTCGTAAACCTCTTCACCGTGGTCAGAGAAATAAACCAGGAAACC > NC_000913/4146300‑4146485
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
