Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 1624 250.6 12620048 98.0% 12367647 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,198,118 A→G D87G (GAC→GGC)  hupA → DNA‑binding protein HU‑alpha

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,198,1180AG100.0% 857.3 / NA 264D87G (GAC→GGC) hupADNA‑binding protein HU‑alpha
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (118/146);  total (118/146)

Only 100 of 270 total aligned reads displayed.

AGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGC  >  NC_000913/4198028‑4198207
                                                                                          |                                                                                         
 gcgcACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGgcgc                                                                                        <  2:4823074/93‑1 (MQ=255)
   gTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAg                                                                                      <  1:409155/93‑1 (MQ=255)
   gTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAg                                                                                      >  1:3359735/1‑93 (MQ=255)
    tACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGt                                                                                     <  1:1210091/93‑1 (MQ=255)
    tACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGt                                                                                     >  1:3510801/1‑93 (MQ=255)
      cTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTta                                                                                   <  2:446750/93‑1 (MQ=255)
         gCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTtaagt                                                                                <  2:610078/93‑1 (MQ=255)
          ccGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTtaagta                                                                               <  1:5119248/93‑1 (MQ=255)
            gCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTtaagtaag                                                                             <  2:440257/93‑1 (MQ=255)
            gCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTtaagtaag                                                                             >  1:3949115/1‑93 (MQ=255)
            gCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTtaagtaag                                                                             >  2:1725195/1‑93 (MQ=255)
             cAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGa                                                                            <  2:5728773/93‑1 (MQ=255)
              aaCCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAt                                                                           >  1:4370466/1‑93 (MQ=255)
              aaCCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGCTAAGTAAGAt                                                                           >  2:4250263/1‑93 (MQ=255)
               aCCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAtt                                                                          >  2:4094876/1‑93 (MQ=255)
               aCCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAtt                                                                          >  1:4675278/1‑93 (MQ=255)
               aCCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAtt                                                                          <  2:2341822/93‑1 (MQ=255)
                 ccGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGc                                                                        <  2:3144791/93‑1 (MQ=255)
                 ccGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGc                                                                        <  2:3789661/93‑1 (MQ=255)
                   gCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGt                                                                      <  1:4333327/93‑1 (MQ=255)
                   gCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGt                                                                      <  1:4275617/93‑1 (MQ=255)
                      gACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGc                                                                   >  2:5190888/1‑93 (MQ=255)
                       gccGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCa                                                                  <  1:5038489/92‑1 (MQ=255)
                        ccGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAg                                                                 <  2:5320689/93‑1 (MQ=255)
                        ccGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAg                                                                 >  2:1203121/1‑93 (MQ=255)
                         cGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGt                                                                <  1:1868263/93‑1 (MQ=255)
                          ggTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTg                                                               <  1:1641786/93‑1 (MQ=255)
                           gTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGa                                                              >  2:6269116/1‑93 (MQ=255)
                           gTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGa                                                              <  1:753403/93‑1 (MQ=255)
                           gTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGa                                                              <  2:4989475/93‑1 (MQ=255)
                           gTAAAGAAATCAAAATTGCCGCAGCTAACGCACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGa                                                              <  1:213617/93‑1 (MQ=255)
                              aaGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACa                                                           <  2:5627430/93‑1 (MQ=255)
                               aGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAg                                                          >  2:1976000/1‑93 (MQ=255)
                                gAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGt                                                         <  2:800038/93‑1 (MQ=255)
                                gAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGt                                                         >  1:5560195/1‑93 (MQ=255)
                                gAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGt                                                         >  2:3235271/1‑93 (MQ=255)
                                gAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGt                                                         <  1:2553768/93‑1 (MQ=255)
                                gAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGt                                                         >  2:3906456/1‑93 (MQ=255)
                                  aaTCAAAATTGGCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGttt                                                       >  1:6175768/1‑93 (MQ=255)
                                  aaTCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGttt                                                       >  1:964568/1‑93 (MQ=255)
                                  aaTCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGttt                                                       <  2:4722191/93‑1 (MQ=255)
                                  aaTCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGttt                                                       >  1:5817205/1‑93 (MQ=255)
                                  aaTCAAAATTGCCGCAGCTAACGTACCGGCAGTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTGAGTAAGATTGCGTGGCAGTGAACAGttt                                                       >  1:3148271/1‑93 (MQ=255)
                                   aTCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGtttt                                                      <  2:1676699/93‑1 (MQ=255)
                                   aTCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGtttt                                                      <  2:486818/93‑1 (MQ=255)
                                     cAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTaa                                                    <  2:5516007/93‑1 (MQ=255)
                                      aaaaTTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAAc                                                   <  1:4044256/93‑1 (MQ=255)
                                          ttGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAg                                               <  1:2271970/93‑1 (MQ=255)
                                           tGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAgg                                              <  1:1756571/93‑1 (MQ=255)
                                           tGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGAGTGGCAGTGAACAGTTTTAACGAAgg                                              >  2:5089599/1‑93 (MQ=255)
                                            gCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAggg                                             <  1:4817987/93‑1 (MQ=255)
                                            gCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAggg                                             >  2:1044338/1‑93 (MQ=255)
                                             ccGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAgggg                                            >  1:5956707/1‑93 (MQ=255)
                                              cGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAGGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggt                                           <  1:26810/93‑1 (MQ=255)
                                              cGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggt                                           <  1:4215975/93‑1 (MQ=255)
                                               gCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtg                                          <  1:656800/93‑1 (MQ=255)
                                                cAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtgg                                         <  1:4928086/93‑1 (MQ=255)
                                                cAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtgg                                         >  1:4421534/1‑93 (MQ=255)
                                                 aGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtggt                                        >  2:201568/1‑93 (MQ=255)
                                                 aGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtggt                                        <  2:3377448/93‑1 (MQ=255)
                                                 aGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtggt                                        <  2:1259320/93‑1 (MQ=255)
                                                 aGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtggt                                        >  2:4573424/1‑93 (MQ=255)
                                                 aGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGggtggt                                        <  1:3546155/93‑1 (MQ=255)
                                                  gCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGtt                                       <  2:4661426/93‑1 (MQ=255)
                                                  acTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGtt                                       <  1:5263329/92‑1 (MQ=255)
                                                    tAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTc                                     >  1:3627589/1‑93 (MQ=255)
                                                       cGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCAcc                                  >  1:2947416/1‑93 (MQ=255)
                                                        gTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCAccc                                 <  2:5817615/93‑1 (MQ=255)
                                                         tACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCAcccc                                >  2:5705166/1‑93 (MQ=255)
                                                             ggCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCtttt                            <  1:4714105/93‑1 (MQ=255)
                                                             ggCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCtttt                            <  2:2719174/93‑1 (MQ=255)
                                                              gCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTg                           >  1:5355942/1‑93 (MQ=255)
                                                              gCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTg                           >  2:3512546/1‑93 (MQ=255)
                                                              gCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGCGGGTTCACCCCTTTTg                           >  1:1117842/1‑93 (MQ=255)
                                                                aTTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTc                         <  2:917382/93‑1 (MQ=255)
                                                                aTTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTc                         <  1:4432004/93‑1 (MQ=255)
                                                                 ttttttTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCt                        >  1:3711724/1‑93 (MQ=255)
                                                                 tttGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCt                        >  2:3030955/1‑93 (MQ=255)
                                                                 tttGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCt                        >  1:101729/1‑93 (MQ=255)
                                                                 tttGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCt                        >  1:5725622/1‑93 (MQ=255)
                                                                   tGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCttt                      <  1:5861131/93‑1 (MQ=255)
                                                                   tGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCttt                      <  2:2580537/93‑1 (MQ=255)
                                                                    gTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTc                     <  2:229316/93‑1 (MQ=255)
                                                                     tttCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCt                    >  1:894618/1‑93 (MQ=255)
                                                                        cTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGc                 <  1:2160878/93‑1 (MQ=255)
                                                                           gCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTc              >  1:3498741/1‑93 (MQ=255)
                                                                            cAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCg             <  1:4576448/93‑1 (MQ=255)
                                                                            cAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCg             <  1:450564/93‑1 (MQ=255)
                                                                             aaGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGa            >  2:1690809/1‑93 (MQ=255)
                                                                              aGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGAt           <  1:153664/93‑1 (MQ=255)
                                                                              aGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGAt           >  1:3479906/1‑93 (MQ=255)
                                                                              aGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGAt           <  1:220620/93‑1 (MQ=255)
                                                                              aGGCACTGAAAGGCGCAGGTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTATCCCCTTTTGTCTTTCTGGGGTCGAt           >  1:1417489/1‑93 (MQ=255)
                                                                               ggCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATc          >  2:3288991/1‑93 (MQ=255)
                                                                                gCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCa         <  2:2841418/93‑1 (MQ=255)
                                                                                  aCTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCAtt       >  1:2530316/1‑93 (MQ=255)
                                                                                  aCTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCAtt       >  1:807680/1‑93 (MQ=255)
                                                                                    tGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGa     <  1:1927176/93‑1 (MQ=255)
                                                                                    tGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGa     <  2:1882536/93‑1 (MQ=255)
                                                                                    tGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGa     >  2:1457579/1‑93 (MQ=255)
                                                                                          |                                                                                         
AGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGC  >  NC_000913/4198028‑4198207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGG  >  NC_000913/4198025‑4198210
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CTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGG                                                                                              >  SRR4302533.4847687/1‑94 (MQ=60)
CTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGG                                                                                              >  SRR4302533.4946098/1‑94 (MQ=60)
 TGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGC                                                                                             <  SRR4302533.808235/94‑1 (MQ=60)
 TGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGC                                                                                             <  SRR4302533.3856744/94‑1 (MQ=60)
  GAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCG                                                                                            <  SRR4302533.4356968/94‑1 (MQ=60)
    GCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCA                                                                                          <  SRR4302533.5992252/94‑1 (MQ=60)
     CGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAG                                                                                         >  SRR4302533.3380492/1‑94 (MQ=60)
     CGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAG                                                                                         <  SRR4302533.3298107/94‑1 (MQ=60)
      GTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGT                                                                                        >  SRR4302533.3532443/1‑94 (MQ=60)
      GTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGT                                                                                        <  SRR4302533.411609/94‑1 (MQ=60)
       TACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTT                                                                                       <  SRR4302533.1217357/94‑1 (MQ=60)
       TACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTT                                                                                       <  SRR4302533.3964367/94‑1 (MQ=60)
        ACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTA                                                                                      >  SRR4302533.3295499/1‑94 (MQ=60)
        ACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTA                                                                                      <  SRR4302533.2315713/94‑1 (MQ=60)
        ACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTA                                                                                      >  SRR4302533.2143320/1‑94 (MQ=60)
        ACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTA                                                                                      >  SRR4302533.802960/1‑94 (MQ=60)
         CTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAA                                                                                     >  SRR4302533.522770/1‑94 (MQ=60)
            GCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTA                                                                                  >  SRR4302533.4726911/1‑94 (MQ=60)
             CCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAA                                                                                 <  SRR4302533.5150179/94‑1 (MQ=60)
             CCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAA                                                                                 <  SRR4302533.5989489/94‑1 (MQ=60)
             CCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAA                                                                                 <  SRR4302533.2090035/94‑1 (MQ=60)
              CGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAG                                                                                >  SRR4302533.3973195/1‑94 (MQ=60)
                CAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAT                                                                              <  SRR4302533.2273944/94‑1 (MQ=60)
                CAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGAT                                                                              >  SRR4302533.4396850/1‑94 (MQ=60)
                 AACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATT                                                                             >  SRR4302533.4703609/1‑94 (MQ=60)
                 AACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATT                                                                             <  SRR4302533.1599076/94‑1 (MQ=60)
                  ACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTG                                                                            <  SRR4302533.5771942/94‑1 (MQ=60)
                  ACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTG                                                                            >  SRR4302533.3816795/1‑94 (MQ=60)
                  ACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTG                                                                            >  SRR4302533.990733/1‑94 (MQ=60)
                     CGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGT                                                                         <  SRR4302533.1605171/94‑1 (MQ=60)
                     CGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGT                                                                         >  SRR4302533.6241167/1‑94 (MQ=60)
                     CGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGT                                                                         >  SRR4302533.3530866/1‑94 (MQ=60)
                      GCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTG                                                                        <  SRR4302533.4359437/94‑1 (MQ=60)
                      GCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTG                                                                        <  SRR4302533.4301336/94‑1 (MQ=60)
                        AGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGC                                                                      <  SRR4302533.4450033/94‑1 (MQ=60)
                         GACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCA                                                                     >  SRR4302533.3390640/1‑94 (MQ=60)
                          GCCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAG                                                                    <  SRR4302533.5068997/94‑1 (MQ=60)
                          ACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAG                                                                    >  SRR4302533.4843319/1‑94 (MQ=60)
                           CCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGT                                                                   >  SRR4302533.4018778/1‑94 (MQ=60)
                            CGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTG                                                                  <  SRR4302533.1879653/94‑1 (MQ=60)
                             GGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGA                                                                 <  SRR4302533.1145353/94‑1 (MQ=60)
                             GGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGA                                                                 <  SRR4302533.1651731/94‑1 (MQ=60)
                             GGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGA                                                                 >  SRR4302533.4606855/1‑94 (MQ=60)
                             GGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGA                                                                 >  SRR4302533.302426/1‑94 (MQ=60)
                              GTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAA                                                                <  SRR4302533.757841/94‑1 (MQ=60)
                              GTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAA                                                                >  SRR4302533.429440/1‑94 (MQ=60)
                              GTAAAGAAATCAAAATTGCCGCAGCTAACGCACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAA                                                                <  SRR4302533.214962/94‑1 (MQ=60)
                               TAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAAC                                                               <  SRR4302533.5231051/94‑1 (MQ=60)
                               TAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAAC                                                               >  SRR4302533.3665707/1‑94 (MQ=60)
                                AAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACA                                                              >  SRR4302533.4891770/1‑94 (MQ=60)
                                 AAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAG                                                             <  SRR4302533.2728750/94‑1 (MQ=60)
                                 AAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAG                                                             <  SRR4302533.99880/94‑1 (MQ=60)
                                 AAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAG                                                             <  SRR4302533.1315021/94‑1 (MQ=60)
                                  AGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGT                                                            >  SRR4302533.192013/1‑94 (MQ=60)
                                  AGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGT                                                            >  SRR4302533.5593798/1‑94 (MQ=60)
                                  AGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGT                                                            >  SRR4302533.2334707/1‑94 (MQ=60)
                                   GAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTT                                                           <  SRR4302533.2569480/94‑1 (MQ=60)
                                    AAATCAAAATTGGCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          >  SRR4302533.6212874/1‑94 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          >  SRR4302533.5852347/1‑94 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          >  SRR4302533.5880100/1‑94 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          <  SRR4302533.1746711/94‑1 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          >  SRR4302533.970230/1‑94 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          <  SRR4302533.1207233/94‑1 (MQ=60)
                                    AAATCAAAATTGCCGCAGCTAACGTACCGGCAGTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTGAGTAAGATTGCGTGGCAGTGAACAGTTT                                                          >  SRR4302533.3167625/1‑94 (MQ=60)
                                       TCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAA                                                       <  SRR4302533.893925/94‑1 (MQ=60)
                                        CAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAAC                                                      >  SRR4302533.457285/1‑94 (MQ=60)
                                        CAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAAC                                                      <  SRR4302533.829401/94‑1 (MQ=60)
                                        CAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAAC                                                      <  SRR4302533.2168639/94‑1 (MQ=60)
                                         AAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACG                                                     <  SRR4302533.5690235/94‑1 (MQ=60)
                                         AAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACG                                                     <  SRR4302533.4068871/94‑1 (MQ=60)
                                         AAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACG                                                     <  SRR4302533.5747044/94‑1 (MQ=60)
                                           AATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAA                                                   >  SRR4302533.4343057/1‑94 (MQ=60)
                                           AATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAA                                                   <  SRR4302533.4093957/94‑1 (MQ=60)
                                            ATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAG                                                  <  SRR4302533.724420/94‑1 (MQ=60)
                                            ATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAG                                                  <  SRR4302533.5525587/94‑1 (MQ=60)
                                            ATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAG                                                  <  SRR4302533.1395345/94‑1 (MQ=60)
                                            ATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAG                                                  <  SRR4302533.4540968/94‑1 (MQ=60)
                                             TTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGG                                                 <  SRR4302533.2286033/94‑1 (MQ=60)
                                              TGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGG                                                <  SRR4302533.1669084/94‑1 (MQ=60)
                                              TGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGG                                                <  SRR4302533.1767274/94‑1 (MQ=60)
                                               GCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGG                                               <  SRR4302533.4847190/94‑1 (MQ=60)
                                               GCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGG                                               >  SRR4302533.5992741/1‑94 (MQ=60)
                                                GCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGT                                              <  SRR4302533.4994802/94‑1 (MQ=60)
                                                 CGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAGGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTG                                             <  SRR4302533.26988/94‑1 (MQ=60)
                                                 CGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTG                                             <  SRR4302533.4241479/94‑1 (MQ=60)
                                                 CGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTG                                             <  SRR4302533.5337027/94‑1 (MQ=60)
                                                  GCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGG                                            >  SRR4302533.4448265/1‑94 (MQ=60)
                                                  GCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGG                                            <  SRR4302533.660675/94‑1 (MQ=60)
                                                   CAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGT                                           <  SRR4302533.4957929/94‑1 (MQ=60)
                                                    AGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTT                                          <  SRR4302533.3568013/94‑1 (MQ=60)
                                                     GCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTT                                         >  SRR4302533.5138596/1‑94 (MQ=60)
                                                     ACTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTT                                         <  SRR4302533.5294923/94‑1 (MQ=60)
                                                      CTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTC                                        >  SRR4302533.445231/1‑94 (MQ=60)
                                                      CTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTC                                        >  SRR4302533.3649910/1‑94 (MQ=60)
                                                       TAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCA                                       >  SRR4302533.3499996/1‑94 (MQ=60)
                                                        AACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCAC                                      >  SRR4302533.3601967/1‑94 (MQ=60)
                                                         ACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACC                                     >  SRR4302533.2965442/1‑94 (MQ=60)
                                                          CGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCC                                    <  SRR4302533.219875/94‑1 (MQ=60)
                                                           GTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCC                                   <  SRR4302533.785136/94‑1 (MQ=60)
                                                             ACCGGCATTTGTTCCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTT                                 <  SRR4302533.3624523/94‑1 (MQ=60)
                                                              CCGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGCAGGGGTGGTTTCACCCCTTT                                >  SRR4302533.446290/1‑94 (MQ=60)
                                                               CGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTT                               >  SRR4302533.6138708/1‑94 (MQ=60)
                                                               CGGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTT                               <  SRR4302533.4227247/94‑1 (MQ=60)
                                                                GGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTG                              <  SRR4302533.4742677/94‑1 (MQ=60)
                                                                GGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTG                              <  SRR4302533.909695/94‑1 (MQ=60)
                                                                GGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTG                              <  SRR4302533.2558470/94‑1 (MQ=60)
                                                                GGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTG                              >  SRR4302533.5388092/1‑94 (MQ=60)
                                                                GGCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGCGGGTTCACCCCTTTTG                              >  SRR4302533.1124474/1‑94 (MQ=60)
                                                                GACATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTG                              <  SRR4302533.6083518/94‑1 (MQ=60)
                                                                 GCATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGT                             >  SRR4302533.4362298/1‑94 (MQ=60)
                                                                   ATTTTTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCT                           >  SRR4302533.3734518/1‑94 (MQ=60)
                                                                   ATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCT                           >  SRR4302533.102360/1‑94 (MQ=60)
                                                                   ATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCT                           <  SRR4302533.1787632/94‑1 (MQ=60)
                                                                   ATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCT                           <  SRR4302533.4458796/94‑1 (MQ=60)
                                                                   ATTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCT                           >  SRR4302533.5760190/1‑94 (MQ=60)
                                                                    TTTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTT                          <  SRR4302533.4439438/94‑1 (MQ=60)
                                                                     TTGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTT                         <  SRR4302533.4805943/94‑1 (MQ=60)
                                                                      TGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTC                        <  SRR4302533.2641741/94‑1 (MQ=60)
                                                                      TGTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTC                        <  SRR4302533.5896570/94‑1 (MQ=60)
                                                                       GTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCT                       >  SRR4302533.104348/1‑94 (MQ=60)
                                                                       GTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCT                       >  SRR4302533.5046393/1‑94 (MQ=60)
                                                                       GTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCT                       >  SRR4302533.147922/1‑94 (MQ=60)
                                                                       GTTTCTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCT                       >  SRR4302533.899876/1‑94 (MQ=60)
                                                                           CTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCG                   >  SRR4302533.4430105/1‑94 (MQ=60)
                                                                           CTGGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCG                   <  SRR4302533.2174178/94‑1 (MQ=60)
                                                                             GGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTC                 >  SRR4302533.3520315/1‑94 (MQ=60)
                                                                             GGCAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTC                 <  SRR4302533.4665056/94‑1 (MQ=60)
                                                                               CAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGA               <  SRR4302533.453261/94‑1 (MQ=60)
                                                                               CAAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGA               <  SRR4302533.4604184/94‑1 (MQ=60)
                                                                                AAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGAT              >  SRR4302533.3501376/1‑94 (MQ=60)
                                                                                AAGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGAT              >  SRR4302533.2649789/1‑94 (MQ=60)
                                                                                AAGGCACTGAAAGGCGCAGGTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTATCCCCTTTTGTCTTTCTGGGGTCGAT              >  SRR4302533.1426065/1‑94 (MQ=60)
                                                                                 AGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATC             <  SRR4302533.154645/94‑1 (MQ=60)
                                                                                 AGGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATC             <  SRR4302533.222003/94‑1 (MQ=60)
                                                                                  GGCACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCA            <  SRR4302533.6239460/94‑1 (MQ=60)
                                                                                    CACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATT          >  SRR4302533.812428/1‑94 (MQ=60)
                                                                                    CACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATT          >  SRR4302533.2545894/1‑94 (MQ=60)
                                                                                    CACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATT          >  SRR4302533.3520276/1‑94 (MQ=60)
                                                                                     ACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTG         <  SRR4302533.5360766/94‑1 (MQ=60)
                                                                                     ACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTG         >  SRR4302533.5794923/1‑94 (MQ=60)
                                                                                     ACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTG         >  SRR4302533.4311895/1‑94 (MQ=60)
                                                                                     ACTGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTG         >  SRR4302533.4299445/1‑94 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       <  SRR4302533.1938937/94‑1 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       <  SRR4302533.1889109/94‑1 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       >  SRR4302533.3503310/1‑94 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       <  SRR4302533.4950529/94‑1 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       >  SRR4302533.3558523/1‑94 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       <  SRR4302533.3977646/94‑1 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       <  SRR4302533.215878/94‑1 (MQ=60)
                                                                                       TGAAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGCGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGAT       >  SRR4302533.2806934/1‑94 (MQ=60)
                                                                                         AAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGC     >  SRR4302533.3539134/1‑94 (MQ=60)
                                                                                         AAAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGC     <  SRR4302533.4195312/94‑1 (MQ=60)
                                                                                          AAGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCT    <  SRR4302533.2229510/94‑1 (MQ=60)
                                                                                           AGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTG   <  SRR4302533.2559596/94‑1 (MQ=60)
                                                                                           AGGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTG   <  SRR4302533.1823532/94‑1 (MQ=60)
                                                                                            GGCGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGG  >  SRR4302533.5586703/1‑94 (MQ=60)
                                                                                             |                                                                                            
CTGAGCGTACTGGCCGCAACCCGCAGACCGGTAAAGAAATCAAAATTGCCGCAGCTAACGTACCGGCATTTGTTTCTGGCAAGGCACTGAAAGACGCAGTTAAGTAAGATTGCGTGGCAGTGAACAGTTTTAACGAAGGGGTGGTTTCACCCCTTTTGTCTTTCTGGCGTCGATCATTGATGCTGG  >  NC_000913/4198025‑4198210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑