Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,203,198 |
Δ1 bp |
coding (312/1290 nt) |
purD ← |
phosphoribosylglycinamide synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,203,195 | 0 | T | . | 96.4%
| 594.5
/ 12.3
| 137 | coding (315/1290 nt) | purD | phosphoribosylglycinamide synthetase |
| Reads supporting (aligned to +/- strand): ref base T (4/1); new base . (48/84); total (52/85) |
| Fisher's exact test for biased strand distribution p-value = 6.86e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 215 total aligned reads displayed.
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
gCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCATTTGTAAAAGCtt > 1:3892355/1‑93 (MQ=255)
cAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTGGTAAAAGCttt > 1:5776187/1‑93 (MQ=255)
aGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAAACTTTTGTAAAAACtttt > 1:6200585/1‑93 (MQ=255)
aGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCtttg < 1:224390/93‑2 (MQ=255)
gATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCtttga < 1:4838362/93‑3 (MQ=255)
aTACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTTGTTAAAGCtttgag > 2:3239282/1‑90 (MQ=255)
tACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATCTTTTGTAAACGCttttagc > 1:3131374/1‑90 (MQ=255)
aCGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGcc < 2:2049465/93‑1 (MQ=255)
aCGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGcc < 2:3977730/93‑1 (MQ=255)
ccAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAAACTTTGGGAAACGC‑TTTGAGGCTTc > 2:2354537/1‑93 (MQ=255)
ccAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTc < 1:1809091/93‑1 (MQ=255)
aGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGAAATCTTTTGTAAACGCTTTT‑AGCCTTccc > 1:5634706/1‑92 (MQ=255)
aGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCa < 1:4721358/93‑1 (MQ=255)
cgcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGt < 2:161851/93‑1 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGtt < 2:222416/93‑1 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGtt < 1:1324873/93‑1 (MQ=255)
gcAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGtt < 1:2547844/93‑1 (MQ=255)
cAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTg > 2:2776543/1‑93 (MQ=255)
cAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTg < 1:5356052/93‑1 (MQ=255)
ggTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTggg < 1:5678764/93‑1 (MQ=255)
ttCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGcc < 1:1834078/93‑1 (MQ=255)
cTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATCCTTTGGAAAAGCTTTTG‑GGCTTCCCGTTGGGgcgc > 1:4895358/1‑93 (MQ=255)
aCCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGCAATCTTTGGGAAACGC‑CTTGAGGCTTCCAGTTTGGgcgcgc > 1:3225845/1‑91 (MQ=255)
cTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTGGTAAAAGCTTTT‑AGGCTTCCAGTTTGGCCGCACCt > 1:1533639/1‑93 (MQ=255)
cTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAAACTTTTGTAAAAGCTTTT‑AGCCTTCCCGCTGGGCCGCACCt > 2:3510890/1‑93 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTTCAGTTGGGGCGCACCTg > 1:1279622/1‑93 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCTTCCCGTTTGGGCGCACCtc > 2:1254355/1‑92 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAAAGC‑TTTGAGCCTTTCAGTTGGGCCGCAcccc > 1:2481129/1‑91 (MQ=255)
tCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTg > 1:2140497/1‑93 (MQ=255)
cGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGc < 2:1835765/93‑1 (MQ=255)
ggTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAAACTTTGGTTAAAACCTTT‑AGACTTCCCGGTTGGCCGCCCCTggg > 2:3758313/1‑91 (MQ=255)
ggTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGGAATCTTTTGTAAAAGCTTTT‑AGCCTTCCAGTTGGGCCGCCCCcgcg > 2:742487/1‑93 (MQ=255)
ggTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCg < 1:307485/93‑1 (MQ=255)
gTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAAACTTTTGTAAACGCTTTT‑AGCCTTCCAGTTTGGCCGCACCCGCgg > 2:1664088/1‑93 (MQ=255)
gTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCCGCgg > 1:2720294/1‑93 (MQ=255)
tGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTTGGGCGCACCTGCGGt > 2:434613/1‑93 (MQ=255)
gAAGTTCTAGTATTCCGCCGTAGGGATCTTATGGCGGGGCTGGAAATATCTTGTTAAAGCTTTT‑AATCTTCCAGTTGGGTCGCACCTGCgggt > 2:6127629/1‑91 (MQ=255)
aaGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTg < 1:1893852/93‑1 (MQ=255)
aaGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTg < 1:1040938/93‑1 (MQ=255)
atgccTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTgg < 1:4889786/89‑1 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGTTgg > 2:4727310/1‑93 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAAACTTTGGTAAACGGTTTTAAG‑CTTCCAGTTGGGGCGGCCCCGCGGTTgg > 2:3186180/1‑93 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTgg < 2:1962201/93‑1 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTgg < 2:5737783/93‑1 (MQ=255)
aGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTgg < 1:4376052/93‑1 (MQ=255)
gTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAAACTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTggg > 1:5054787/1‑93 (MQ=255)
ttCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAAAATTTGGGGAACGC‑CTTGAGCCTTCCAGTTGGGGCGCACCTGCGGGTGGGc > 1:1623512/1‑93 (MQ=255)
cTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCCGGTGGGGCg > 1:84316/1‑93 (MQ=255)
ggTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTT‑AGCCTTCCAGTTTGGGCGCACCTGCGGTTGGGGCGaa > 2:2862063/1‑93 (MQ=255)
gTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATATTTGGTAAACGCCTTT‑AGACCTCCAGTTGGGGCGGCCGTGCGGGTGGGCCGGAg > 2:1426638/1‑93 (MQ=255)
gTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAACCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAg < 2:5295061/93‑1 (MQ=255)
tATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGa < 2:4193480/93‑1 (MQ=255)
ttCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTGGTAAAAGC‑TTTGAGGCTTCCCGTTGGGGCGCCCCTGCGGTTGGGCCGAAGagt > 2:500806/1‑91 (MQ=255)
tCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGAttt < 1:2306949/93‑1 (MQ=255)
ccgccgTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGAtttt < 1:6019639/93‑1 (MQ=255)
cgccgTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTc < 1:769049/93‑1 (MQ=255)
cgccgTAGGGATCTTATGGCGGGCAAGGAAATCTTTGGTAAACGC‑TTTGAGACTGCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTc < 2:1130201/93‑1 (MQ=255)
ccgTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGGAAACGCTTTT‑AGCCTTCCAGTTGGGGCGCACCCGCGGTTGGGCCGAAGATTTTTAg > 2:5676236/1‑93 (MQ=255)
ccgTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAg > 2:5241233/1‑93 (MQ=255)
ccgTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAg < 1:3624163/93‑1 (MQ=255)
cgTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTCAGc > 2:4049707/1‑93 (MQ=255)
gTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGcc < 1:5120465/93‑1 (MQ=255)
tAGGGATCTTATGGCGGGCCAGGGAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGCAGATTTTCAGccc > 1:5038370/1‑93 (MQ=255)
tAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTTAGccc > 2:1523972/1‑93 (MQ=255)
tAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGccc < 1:5790754/93‑1 (MQ=255)
aGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGcccc > 1:4093095/1‑92 (MQ=255)
aGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCcg < 1:1215727/93‑1 (MQ=255)
gggATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCcgg < 2:2673814/93‑1 (MQ=255)
gggATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCcgg < 1:1487889/93‑1 (MQ=255)
ggATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCcggc < 2:1741655/93‑1 (MQ=255)
gATCTTATGGCGGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCccgcg > 2:797402/1‑93 (MQ=255)
aTCTTATGGCGGGCCAGGAAATCTTTGGGAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGGCGAAGATTTTTAGCCcgggcg > 2:2550735/1‑90 (MQ=255)
tCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCcggaggg > 2:884019/1‑92 (MQ=255)
cTTATGGCGGGCCAGGGAATCTTTTGTAAACGCTTTT‑AGCCTTCCAGTTTGGGCGCACCTGCGGGTGGGGCGAAGATTTTTAGACCGgcggcg > 2:629133/1‑93 (MQ=255)
ttATGGCGGGCCCGGAAATCTTTTGTAAACGC‑CTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGGCGGAGATTTTCAGCCCGGCGgcgc > 2:2569664/1‑93 (MQ=255)
ttATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTTGGCCGCACCTGCGGTTGGGGCGAAGATTTTCAGCCCGGGGgcgc > 1:5481912/1‑93 (MQ=255)
ttATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGgcgc < 2:1843827/93‑1 (MQ=255)
cGGGCCAGGAAATCTTTGGTAAGCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAgg < 2:5949400/93‑1 (MQ=255)
cGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAgg < 1:1986990/93‑1 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt < 2:5861693/93‑1 (MQ=255)
gggCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGACGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGt > 2:3880644/1‑93 (MQ=255)
gCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTAt < 2:3433217/93‑1 (MQ=255)
gCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTAt > 2:690733/1‑93 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCg > 2:4581443/1‑93 (MQ=255)
cAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCg > 1:3784620/1‑93 (MQ=255)
aGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGa > 1:2666210/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 1:2866485/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 2:2311453/1‑93 (MQ=255)
ggAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAc > 1:3335206/1‑93 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCa < 1:1659555/93‑1 (MQ=255)
aaaTCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCa < 1:4460152/93‑1 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 2:4466688/1‑93 (MQ=255)
tCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGc > 2:845099/1‑93 (MQ=255)
ttGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCtt < 2:4384638/93‑1 (MQ=255)
tGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCttt < 2:1004688/93‑1 (MQ=255)
gTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCa < 1:3998258/93‑1 (MQ=255)
gTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCa > 2:3033409/1‑93 (MQ=255)
tAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAc > 2:3385540/1‑93 (MQ=255)
aaaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAcc < 1:4501125/93‑1 (MQ=255)
aaCGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCa < 1:3581976/93‑1 (MQ=255)
|
CGCAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA > NC_000913/4203103‑4203283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203105‑4203291
|
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAAACTTTTGTAAAAACTTTT > SRR4302533.6237777/1‑94 (MQ=60)
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTG < SRR4302533.1741423/94‑1 (MQ=60)
GATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAG < SRR4302533.4867688/94‑1 (MQ=60)
ATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGGAATCTTTTGTAAACGCTTTT‑AGC > SRR4302533.3150627/1‑94 (MQ=60)
ATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGC < SRR4302533.3285602/94‑1 (MQ=60)
acgcgtccgcgGGTTCTACCTCGGTGAACTCCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCT < SRR4302533.207440/83‑1 (MQ=60)
CCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCC < SRR4302533.1820097/94‑1 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGAAATCTTTTGTAAACGCTTTT‑AGCCTTCCC > SRR4302533.5668779/1‑94 (MQ=60)
CAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCA < SRR4302533.4944928/94‑1 (MQ=60)
AGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCCTTGGTAAACGCTTTT‑AGCCTTTCAG > SRR4302533.4403241/1‑94 (MQ=60)
AGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAAAGCTTTT‑AGCCCTCCAG > SRR4302533.985507/1‑94 (MQ=60)
AGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAG < SRR4302533.4749985/94‑1 (MQ=60)
CGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTT < SRR4302533.3008597/94‑1 (MQ=60)
GCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTG < SRR4302533.1332821/94‑1 (MQ=60)
GCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTG < SRR4302533.2563525/94‑1 (MQ=60)
GCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTG < SRR4302533.3619364/94‑1 (MQ=60)
CAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATATTTTGTAAAAGC‑TTTGAGGCTTCCCGTTGG > SRR4302533.1103518/1‑94 (MQ=60)
CAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGG < SRR4302533.5388203/94‑1 (MQ=60)
AGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGG < SRR4302533.78932/94‑1 (MQ=60)
GGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGC < SRR4302533.5713063/94‑1 (MQ=60)
GGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATATTTGGTGAACGC‑TTTGAGCCTTCCCGTTGGGG > SRR4302533.3656468/1‑94 (MQ=60)
GTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATATTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGC > SRR4302533.2651068/1‑94 (MQ=60)
TTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCG < SRR4302533.1845273/94‑1 (MQ=60)
TTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCG < SRR4302533.5204816/94‑1 (MQ=60)
TCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCCGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTTGGCCGC > SRR4302533.1824664/1‑94 (MQ=60)
TACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAAACTTTGGGAAAAGC‑TTTGAGCCTTCCAGTTTGGGCGCAC > SRR4302533.5221932/1‑94 (MQ=60)
CCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTGGTAAAAGCTTTT‑AGGCTTCCAGTTTGGCCGCACCT > SRR4302533.1542851/1‑94 (MQ=60)
CCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGgcgccacc > SRR4302533.5820489/1‑86 (MQ=60)
CCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCT < SRR4302533.5424293/94‑1 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTTCAGTTGGGGCGCACCTG > SRR4302533.1287314/1‑94 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAAAGC‑TTTGAGCCTTTCAGTTGGGCCGCACCcc > SRR4302533.2496430/1‑92 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTG > SRR4302533.2153691/1‑94 (MQ=60)
CTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTG < SRR4302533.1314166/94‑1 (MQ=60)
CGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCACGAAATCTTTTGTGAACGC‑CTTGAGCCTTCCCGTTGGGGCGCACCTGCG > SRR4302533.3860947/1‑94 (MQ=59)
CGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCG > SRR4302533.1660612/1‑94 (MQ=60)
GGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGCAATCTTTGGTTAAAGCTTTT‑AGCCTTCCAGTTGGGCCGCccccgccg > SRR4302533.4772321/1‑86 (MQ=60)
GGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCCGCGG > SRR4302533.2736990/1‑94 (MQ=60)
GGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGG < SRR4302533.309366/94‑1 (MQ=60)
AAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGG < SRR4302533.1047058/94‑1 (MQ=60)
AAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGG < SRR4302533.1905414/94‑1 (MQ=60)
atgcCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGG < SRR4302533.4919415/90‑1 (MQ=60)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAAACTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGG > SRR4302533.5085345/1‑94 (MQ=60)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCACGAAATCTTTGGTAAACG‑GATTGAGCCTTCCAGATGGGCCGCACCCGCGGGTGGG > SRR4302533.5085344/1‑94 (MQ=59)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGG < SRR4302533.4919416/94‑1 (MQ=60)
AGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGG < SRR4302533.4402463/94‑1 (MQ=60)
GTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCATTGGGAAACAC‑TTTGAGCCGTCCAGTTGGGCCGCACCccccgatgggc > SRR4302533.2337159/1‑83 (MQ=60)
GTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAATCTTTGGGAAAAGC‑TTTGAGCCTTTCAGTTGGGGCGCACCTGCGGGTGGGC > SRR4302533.6244274/1‑94 (MQ=60)
GTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAAACTTTGGTAAAAGCTTTT‑AGACTTCCAGTTGGGgcgcccccgcgggtgggg > SRR4302533.449445/1‑76 (MQ=60)
GTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAAAATTTGGGGAACGC‑CTTGAGCCTTCCAGTTGGGGCGCACCTGCGGGTGGGC > SRR4302533.1633346/1‑94 (MQ=59)
TTCTGGTACTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCC < SRR4302533.2281099/94‑1 (MQ=60)
TCTGGTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCCGTTGGGCCGCACCTGCcggtggggcg > SRR4302533.84855/1‑84 (MQ=60)
CTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCCGTTGGGGCGCCCCTGCGGGTGGGCCGA > SRR4302533.2779180/1‑94 (MQ=60)
TGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAA < SRR4302533.1955521/94‑1 (MQ=60)
GGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAAAGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAG > SRR4302533.1899726/1‑94 (MQ=60)
GGCATTCCGCCGTAGGGATCTTATGGCGGGGCAGGAAAACTTTTGTAAAAGC‑TTTGAGCCTTCCAGTTGGGgcggccctgccggtggggcggcg > SRR4302533.4571219/1‑71 (MQ=45)
GTATTCCGCCGTAGGGATCTTATGGCGGGGCAGGCAATCTTTGGGAAACGC‑ATTGAGCCCTCCAGGTGGGACGCACCTGTGGCTGGGCCGACGA > SRR4302533.1449826/1‑94 (MQ=32)
GTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGGCTTCCCGTTGGGCCGCACCTGCGGGTGGGCGCAAGA > SRR4302533.2808882/1‑94 (MQ=60)
GTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGA < SRR4302533.2309984/94‑1 (MQ=60)
TATTCCGCCGTAGGGATCTTATGGCGGGCCCGGAAAACTTTGGTAAACACCTTTG‑GCCTTCCAGTTtgggcgccgccgcagatggggcggaaat > SRR4302533.1292209/1‑66 (MQ=43)
TCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTT < SRR4302533.3442610/94‑1 (MQ=60)
TCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTT < SRR4302533.2321241/94‑1 (MQ=60)
CCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTC < SRR4302533.6056116/94‑1 (MQ=60)
CGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCA < SRR4302533.773580/94‑1 (MQ=60)
GCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAG < SRR4302533.4873013/94‑1 (MQ=60)
GCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCCGCGGTTGGGCCGAAGATTTTCAG > SRR4302533.3865270/1‑94 (MQ=60)
CCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTT‑AGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGGAGATTTTCAGC > SRR4302533.2385841/1‑94 (MQ=60)
CCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGC < SRR4302533.5793899/94‑1 (MQ=60)
CCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGC < SRR4302533.3646465/94‑1 (MQ=60)
CCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGC < SRR4302533.1278440/94‑1 (MQ=60)
CCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAGC > SRR4302533.1514877/1‑94 (MQ=60)
CGTAGGGATCTTATGGCGGGCCAGGGAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAGCC > SRR4302533.5898729/1‑94 (MQ=60)
CGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAGCC > SRR4302533.6188482/1‑94 (MQ=60)
CGTAGGGATCTTATGGCGGGCCAGGAAATCTTTTGTAAACGC‑TTTGAGCCCTCCAGTTGGGCCGCACCTGCGGCTGGGCCGGAGATTTTCAGCC > SRR4302533.2990338/1‑94 (MQ=60)
CGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCC < SRR4302533.5517044/94‑1 (MQ=60)
GTAGGGATCTTATGGCGGGGCAGGAAATCTTTGGTAAAAGC‑TTTGAGCCTTCCAGTTGGGGCGCACCTGCGGTTGGGGCGAAGGTTTTTAGCCC > SRR4302533.1139716/1‑94 (MQ=60)
GTAGGGATCTTATGGCGGGCCAGGGAATCTTTTGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGCAGATTTTCAGCCC > SRR4302533.5068877/1‑94 (MQ=60)
GTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCC < SRR4302533.5151402/94‑1 (MQ=60)
TAGGGATCTTATGGCGGGGCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGAGTTTTAACCCG > SRR4302533.4268353/1‑94 (MQ=60)
TAGGGATCTTATGGCGGGCCCGGAAATCTTTTGTAAAAGCTTTTG‑GCCTTCCCGTTGGGCCGCACCTACGGTTGGGGCGGAAATTTTCTGCCCG > SRR4302533.4421712/1‑94 (MQ=41)
TAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCG < SRR4302533.3186196/94‑1 (MQ=60)
TAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCG < SRR4302533.5825739/94‑1 (MQ=60)
TAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCC > SRR4302533.4118010/1‑94 (MQ=60)
AGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGG < SRR4302533.1223030/94‑1 (MQ=60)
GGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGC < SRR4302533.1496866/94‑1 (MQ=60)
GGATCTTATGGCGGGCCAGGAAATCTTGGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCG < SRR4302533.1564023/94‑1 (MQ=60)
CTTATGGCGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTTGGCCGCACCTGCGGTTGGGGCGAAGATTTTCAGCCCGGGGGCGC > SRR4302533.5514960/1‑94 (MQ=60)
ATGGCGGGGCAGGAAATCTTTGGGAAAGGC‑TTTGAGCCCTTCAGTTGGGCCGCACCTGCGGTTGGGTCGGAGATTTTCAGCCCGGGCGCGCGGA > SRR4302533.1259735/1‑94 (MQ=39)
CGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT > SRR4302533.467472/1‑94 (MQ=60)
CGGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGT < SRR4302533.1999145/94‑1 (MQ=60)
GGGCCAGGAAATCTTTGGTATACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTA > SRR4302533.1653821/1‑94 (MQ=60)
GGGCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTA < SRR4302533.4077237/94‑1 (MQ=60)
GCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATC > SRR4302533.2224990/1‑94 (MQ=60)
GCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATC > SRR4302533.6204476/1‑94 (MQ=60)
GCCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTGGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATC < SRR4302533.1440820/94‑1 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCG < SRR4302533.2718860/94‑1 (MQ=60)
CCAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCG > SRR4302533.3807794/1‑94 (MQ=60)
CAGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGA > SRR4302533.2682568/1‑94 (MQ=60)
AGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302533.2884121/1‑94 (MQ=60)
AGGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGAC > SRR4302533.3355814/1‑94 (MQ=60)
GGAAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGAATCGACA > SRR4302533.5918516/1‑94 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC > SRR4302533.3949082/1‑94 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC < SRR4302533.2333848/94‑1 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC < SRR4302533.4487132/94‑1 (MQ=60)
AAATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCAC < SRR4302533.1669592/94‑1 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG < SRR4302533.4339821/94‑1 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG > SRR4302533.2989502/1‑94 (MQ=60)
AATCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACG > SRR4302533.3116368/1‑94 (MQ=60)
TCTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCC < SRR4302533.2104114/94‑1 (MQ=60)
CTTTGGTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCT > SRR4302533.5134669/1‑94 (MQ=60)
GTAAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCAC < SRR4302533.4022600/94‑1 (MQ=60)
AAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA < SRR4302533.570430/94‑1 (MQ=60)
AAACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCA < SRR4302533.4528390/94‑1 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCCCGCCTTTCACCAG > SRR4302533.5141196/1‑94 (MQ=60)
AACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAG < SRR4302533.3604040/94‑1 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGC < SRR4302533.2638847/94‑1 (MQ=60)
ACGC‑TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGGTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGG > SRR4302533.2833792/1‑94 (MQ=60)
gcTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGG > SRR4302533.4159033/3‑94 (MQ=60)
CTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGC > SRR4302533.3475360/1‑94 (MQ=60)
TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCG > SRR4302533.3457129/1‑94 (MQ=60)
TTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCG > SRR4302533.945812/1‑94 (MQ=60)
TGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > SRR4302533.3684460/1‑94 (MQ=60)
|
CAGATACGCCAGCGCAGGTTCTACCTCGGTGAAGTTCTGGTATTCCGCCGTAGGGATCTTATGGCGGGCCAGGAAATCTTTGGTAAACGCTTTTGAGCCTTCCAGTTGGGCCGCACCTGCGGTTGGGCCGAAGATTTTCAGCCCGGCGGCGCGGAAGGTATCGACCACGCCTTTCACCAGCGGCGCT > NC_000913/4203105‑4203291
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
