Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1624 |
250.6 |
12620048 |
98.0% |
12367647 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,225,139 |
T→C |
intergenic (+49/‑171) |
metH → / → yjbB |
B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase/putative alpha helix protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,225,139 | 0 | T | C | 100.0%
| 393.9
/ NA
| 126 | intergenic (+49/‑171) | metH/yjbB | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase/putative alpha helix protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (67/59); total (67/59) |
Only 100 of 162 total aligned reads displayed.
AGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTA > NC_000913/4225050‑4225228
|
ggcgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGcc < 1:1081569/92‑1 (MQ=255)
ggcgcTGGCTGGCACCGAATCTGGGGCATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGcc > 2:2129138/2‑93 (MQ=255)
gcgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGccc < 1:5713551/93‑1 (MQ=255)
gcgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGccc > 2:3153860/1‑93 (MQ=255)
gcgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTCCCTT‑ACAACAAACAGG‑GCGCTAAATGAGCGccc < 1:558871/93‑1 (MQ=255)
ctctggctggCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCt < 1:5988469/91‑1 (MQ=255)
cgcTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCt < 1:3987316/93‑1 (MQ=255)
gctggctgGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTg < 1:4155285/93‑1 (MQ=255)
ctggctggCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGt < 2:5715395/93‑1 (MQ=255)
ctggctggCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCCGt > 2:2028037/1‑93 (MQ=255)
agagctggcACCGAATCGGGGTTATGACGGGGATTGATCCAAAAATCTGTCATTTTCCCTT‑ACAACAAACAGG‑GCGCAAAATGAGCGCCCTGt < 2:3545193/90‑1 (MQ=255)
tggctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGCGCTCTCAATGGGCCCCCTgc > 1:1476652/1‑92 (MQ=255)
tggctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGtc > 2:3106270/1‑93 (MQ=255)
gctggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGtctc > 2:2972464/1‑93 (MQ=255)
tggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCtt > 2:5022499/1‑93 (MQ=255)
ggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCttt < 1:4989006/93‑1 (MQ=255)
ggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCttt < 2:1032179/93‑1 (MQ=255)
ggcACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGACCTGTCTCttt > 1:3843229/1‑93 (MQ=255)
cACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTttat > 2:1073679/1‑93 (MQ=255)
aCCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACGGG‑GCGCTCAATGAGCGCCCTGTCTCTttatt < 1:3163346/93‑1 (MQ=255)
aCCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCGCTGTCTCTttatt > 2:2022166/1‑93 (MQ=255)
gAATCTGGGGTATGACGCGGACTGATTCACAAATCGGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAat < 1:4632607/93‑1 (MQ=255)
aTCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAatat < 1:575522/93‑1 (MQ=255)
tCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATg < 1:2928461/93‑1 (MQ=255)
cTGGGGTATGACGCGGACTAATTCAAAAATCTGTCACTTTCCCTT‑ACAACAAACAGG‑GCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGa < 1:3672141/93‑1 (MQ=255)
gggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAac > 1:2794605/1‑93 (MQ=255)
ggTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATTAGCGCCCTGTCTCTTTATTAATATTAAacc > 1:3591349/1‑92 (MQ=255)
tATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTAAATGAGCCCCCTGTCTCTTTATTAATATGAAACACt < 1:5578086/93‑1 (MQ=255)
tGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTta < 1:2043298/93‑1 (MQ=255)
tGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTta < 2:4271257/93‑1 (MQ=255)
gaagcgGAGTGATTCAAAAATCTGTCACTTTCCCTT‑ACAACAAACAGG‑GCGCTAAATGAACGCCCTGTCTCTTTATTAATATGAAACACTtat < 1:4946697/90‑1 (MQ=255)
gACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTtat > 2:5816754/1‑93 (MQ=255)
gACGCGGACTGATCCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGG‑GCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTtat < 1:4824334/93‑1 (MQ=255)
gcgcgGCCTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACGGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTtata < 1:2613227/92‑1 (MQ=255)
aCGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTtata < 2:789800/93‑1 (MQ=255)
aCGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTtata < 2:3005962/93‑1 (MQ=255)
gcgTACTGATTCAAAAATCTGTC‑TTTTTCCTTAAAAACAAACGGG‑GCGCTAAAGGCGCGCCCTGTCTCTTTATTAATATGAAACACTTATACt < 1:5378603/93‑1 (MQ=255)
gACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGGCCTGTCTCTTTATTAATATGAAACACTTATACTTGa > 2:519372/1‑93 (MQ=255)
gACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GAGCGCCATGTGAGCCCCCGCCCTTTTTTTATATTAAAAACACATACTTGa > 1:2240054/1‑93 (MQ=255)
cTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGAGCACTGAGGGCCCTGCGCCTTTGTTTATATTAAACACTTTTACTCGata > 1:1206780/1‑91 (MQ=255)
tGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCCATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGaaaa > 2:3603649/1‑92 (MQ=255)
tGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGaaaa > 2:1378426/1‑92 (MQ=255)
tGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAAc > 2:615457/1‑93 (MQ=255)
tGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAAc > 2:1047282/1‑93 (MQ=255)
tatccacaAATCTTTCTCTTTTCCTT‑ACAACAAACAGG‑GCGCTCAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa < 1:212401/89‑1 (MQ=255)
gATTCACAACTCTTTCACTTTTCCTT‑CCAACAACCAGG‑CCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa < 1:1676983/93‑1 (MQ=255)
gATTCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACa < 1:443376/93‑1 (MQ=255)
aTTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAg < 2:878133/93‑1 (MQ=255)
ttCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTTATATTAAACACTTATACTTGAAACaag > 2:2433329/1‑91 (MQ=255)
ttCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAgg < 2:2781442/93‑1 (MQ=255)
tCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGc < 1:1413047/93‑1 (MQ=255)
cacaAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCt < 2:3097269/93‑1 (MQ=255)
caAATCTGTCACTTTTCCTT‑ACAACAAACGGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTgg < 2:5199090/93‑1 (MQ=255)
caAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTgg > 2:4239143/1‑93 (MQ=255)
caAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTgg > 2:3861163/1‑93 (MQ=255)
caAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTgg < 2:579793/93‑1 (MQ=255)
aaTCTGTCTTTTTTCCTA‑ACAACAAACAGG‑GCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaa < 2:1357640/93‑1 (MQ=255)
aTCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaat > 1:3133800/1‑93 (MQ=255)
tCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaata > 1:3918980/1‑93 (MQ=255)
tGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGaataat > 1:3167922/1‑93 (MQ=255)
ttCATTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATc < 2:2632986/92‑1 (MQ=255)
gTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATc > 2:3200161/1‑93 (MQ=255)
ctttttCCTT‑ACAACAAACAGG‑CCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTa < 2:1857935/91‑1 (MQ=255)
aCTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTa > 1:6239348/1‑93 (MQ=255)
aCTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTa > 1:1888010/1‑93 (MQ=255)
cTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAg < 1:2921026/93‑1 (MQ=255)
ttttCTTA‑ACAACAAGCGGG‑CCGTTAAAGGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGc < 2:5602901/93‑1 (MQ=255)
ttttCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGGAACAAGCTGGGATAATCTTAGc > 2:1664051/1‑93 (MQ=255)
ttttCCTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGc > 2:635840/1‑93 (MQ=255)
ttCCTA‑AAAAAAAACAGG‑GCGCTAAATGAGCCCCCTGTCTCTTTATTAATTTGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCg < 1:3372855/93‑1 (MQ=255)
ccTT‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGa > 1:3644474/1‑93 (MQ=255)
tt‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGaaa > 2:828444/1‑93 (MQ=255)
tt‑ACAACAAACAGG‑GCGCTCAATGAGCGCCCCGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGGATAAACTTAGCCCGaaa > 2:5366816/1‑93 (MQ=255)
t‑ACAAAAAACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGaaaa > 1:2770985/1‑93 (MQ=255)
caacaaACAGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAc > 2:2840474/1‑93 (MQ=255)
aacaaacgGG‑GCGTTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACg < 1:3544171/93‑1 (MQ=255)
aacaaacaGG‑GCGCTCAATGAGCGCCCTTTCTCTTTTTTAATATTAAACACTTATACTGGAAACAGGCTTGAATAATCTTAGCCGGaaaaaaa > 2:4852915/1‑91 (MQ=255)
aaaaacaGG‑GCGCTAAATGACCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGa < 2:371625/91‑1 (MQ=255)
aacaGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATg > 1:2120543/1‑93 (MQ=255)
aacaGG‑GCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATg < 1:4484353/93‑1 (MQ=255)
agaGG‑CCGATCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGt < 2:1241903/91‑1 (MQ=255)
acggg‑gCGCAAAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGt < 2:3452107/90‑1 (MQ=255)
acaGG‑GCGCTAAATGGGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGt < 1:3760737/93‑1 (MQ=255)
caGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTc < 2:6240782/93‑1 (MQ=255)
caGG‑CCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTc < 1:5039759/93‑1 (MQ=255)
aGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGGATAATCTTAGCCGGAAAAAAGAAAGTCa > 2:5417253/1‑93 (MQ=255)
aGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCa > 2:5002671/1‑93 (MQ=255)
aGG‑GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCa < 2:1551250/93‑1 (MQ=255)
gg‑gCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCaa > 2:3690091/1‑93 (MQ=255)
gcgcTCAATGAGCGCTCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCaaaa < 1:2999108/93‑1 (MQ=255)
gcgcTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCaaaa < 1:3003903/93‑1 (MQ=255)
cTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGc > 2:5085616/1‑93 (MQ=255)
cTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGc > 2:5514547/1‑93 (MQ=255)
cTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGc > 2:4779674/1‑93 (MQ=255)
aaTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGcaca < 2:2156281/93‑1 (MQ=255)
aaTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGcaca > 1:6261598/1‑93 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAg > 2:3331860/1‑93 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAg < 2:5981192/93‑1 (MQ=255)
aTGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAg < 1:408254/93‑1 (MQ=255)
tGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGt < 2:479584/93‑1 (MQ=255)
|
AGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGG‑GCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTA > NC_000913/4225050‑4225228
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA > NC_000913/4225046‑4225232
|
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGC < SRR4302533.701918/94‑1 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGC > SRR4302533.2815591/1‑94 (MQ=60)
GTTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGC > SRR4302533.4042201/1‑94 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCG < SRR4302533.824485/94‑1 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCG < SRR4302533.5960154/94‑1 (MQ=60)
TTGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCG > SRR4302533.5869748/1‑94 (MQ=60)
TGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGC < SRR4302533.625559/94‑1 (MQ=60)
TGGGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGC < SRR4302533.2481719/94‑1 (MQ=60)
GGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCC < SRR4302533.1087951/94‑1 (MQ=60)
GCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCT < SRR4302533.5748060/94‑1 (MQ=60)
GCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTCCCTT‑ACAACAAACAGGGCGCTAAATGAGCGCCCT < SRR4302533.562192/94‑1 (MQ=60)
CTCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTG < SRR4302533.6024737/94‑1 (MQ=60)
CGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTG < SRR4302533.4011605/94‑1 (MQ=60)
GCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGT < SRR4302533.4180464/94‑1 (MQ=60)
TGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCT > SRR4302533.5286051/1‑94 (MQ=60)
GGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTC < SRR4302533.3177739/94‑1 (MQ=60)
TGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGACCTGTCTCTTT > SRR4302533.3866706/1‑94 (MQ=60)
GGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTA < SRR4302533.5019253/94‑1 (MQ=60)
GGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTAAATGAGCGCCCTGTCTCTTTA < SRR4302533.6201495/94‑1 (MQ=60)
gcccgGAATCTGGGTTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑AAAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTAT < SRR4302533.5978549/89‑1 (MQ=60)
ACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACGGGGCGCTCAATGAGCGCCCTGTCTCTTTATTA < SRR4302533.3182817/94‑1 (MQ=60)
GAATCTGGGGTATGACGCGGACTGATTCACAAATCGGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATA < SRR4302533.4660681/94‑1 (MQ=60)
ATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATG < SRR4302533.578918/94‑1 (MQ=60)
TCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGA < SRR4302533.2946374/94‑1 (MQ=60)
TCGGGGGTATGACGCGGACTGTTTCACAAATCTGTCACTTTCCTTT‑ACAACAAACGGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGA < SRR4302533.1359256/94‑1 (MQ=60)
CTGGGGTATGACGCGGACTAATTCAAAAATCTGTCACTTTCCCTT‑ACAACAAACAGGGCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAA < SRR4302533.3694709/94‑1 (MQ=60)
TGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCCCAATGAGGGGCCTGTCTCTTTATTAATATttaa > SRR4302533.4770886/1‑90 (MQ=60)
GGGGTATGAGGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAGC < SRR4302533.2801631/94‑1 (MQ=60)
GGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCCATGAGCGCCCTGTCTCTTTATTAATATGAAAC > SRR4302533.3723369/1‑94 (MQ=60)
GGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAAC > SRR4302533.2811793/1‑94 (MQ=60)
GGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATTAGCGCCCTGTCTCTTTATTAATATTAAACC > SRR4302533.3613456/1‑94 (MQ=60)
GGGTATGACGCGGACTGATTCAAAAATCTGCCACTTTTCCTT‑ACAACAAACGGGGCGCTAAATGAGCCCCCTGTCTCTTTATTAATATGAAACA < SRR4302533.297540/94‑1 (MQ=60)
TATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTAAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTT < SRR4302533.5611798/94‑1 (MQ=60)
ATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTA < SRR4302533.4986061/94‑1 (MQ=60)
TGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTAT < SRR4302533.2055896/94‑1 (MQ=60)
GACGCGGACTGATCCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGGGCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATA < SRR4302533.4853556/94‑1 (MQ=60)
GAAGCGGAGTGATTCAAAAATCTGTCACTTTCCCTT‑ACAACAAACAGGGCGCTAAATGAACGCCCTGTCTCTTTATTAATATGAAACACTTATA < SRR4302533.4976637/94‑1 (MQ=60)
GCGCGGCCTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACGGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATAC < SRR4302533.2629267/94‑1 (MQ=60)
GCGTACTGATTCAAAAATCTGTC‑TTTTTCCTTAAAAACAAACGGGGCGCTAAAGGCGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTG < SRR4302533.5410922/94‑1 (MQ=26)
CGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGG < SRR4302533.2074621/94‑1 (MQ=60)
CGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGG > SRR4302533.575372/1‑94 (MQ=60)
CTGATACACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAAC < SRR4302533.5741743/94‑1 (MQ=60)
tatcCACAAATCTTTCTCTTTTCCTT‑ACAACAAACAGGGCGCTCAAGGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAG < SRR4302533.213738/90‑1 (MQ=60)
GATTCACAACTCTTTCACTTTTCCTT‑CCAACAACCAGGCCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAG < SRR4302533.1687137/94‑1 (MQ=60)
GATTCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAG < SRR4302533.446027/94‑1 (MQ=60)
TCACAAATCTGTCATTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCT < SRR4302533.1421592/94‑1 (MQ=60)
AATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAAT > SRR4302533.3153070/1‑94 (MQ=60)
atcgtccatTTTTCCTT‑ACAAAAAACAGGGCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATA < SRR4302533.4620780/85‑1 (MQ=60)
ATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATA > SRR4302533.3942911/1‑94 (MQ=60)
CTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCCATGAGCGCCCTGTCTCTTTTTTTATATTAAAAACTTATAATGGAAAaaagctgggaaaat > SRR4302533.3632037/1‑80 (MQ=51)
CTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAAT > SRR4302533.3187417/1‑94 (MQ=60)
TGTCACTTTTCCTT‑ACAACAAACAGGGCCCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATC < SRR4302533.4196037/94‑1 (MQ=60)
CACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTA > SRR4302533.1899544/1‑94 (MQ=60)
CACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTA > SRR4302533.6276711/1‑94 (MQ=60)
ACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATTTTAG > SRR4302533.3966481/1‑94 (MQ=60)
ACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAG < SRR4302533.3074928/94‑1 (MQ=60)
ACTTTTCCTT‑AAAAAAAACGGGGCGCTCAATGACCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAG < SRR4302533.1379960/94‑1 (MQ=60)
CTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGC < SRR4302533.2938919/94‑1 (MQ=60)
CTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGC < SRR4302533.2869054/94‑1 (MQ=60)
TTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCC > SRR4302533.1705963/1‑94 (MQ=60)
TTTTCCCA‑ACAACAAACAGGGCTCTAAAGGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCC < SRR4302533.5470797/94‑1 (MQ=60)
TTCCTA‑AAAAAAAACAGGGCGCTAAATGAGCCCCCTGTCTCTTTATTAATTTGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGG < SRR4302533.3393682/94‑1 (MQ=60)
TCCTT‑ACAACAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGA > SRR4302533.3666882/1‑94 (MQ=60)
TT‑ACAAAAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAA > SRR4302533.2787985/1‑94 (MQ=60)
ACAAAAACCAGGGCCCTCAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAAC < SRR4302533.4581192/94‑1 (MQ=60)
AACAAACGGGGCGTTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGA < SRR4302533.3566013/94‑1 (MQ=60)
CAAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAAT > SRR4302533.2149803/1‑94 (MQ=60)
CAAACAGGACGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAAT < SRR4302533.6342011/94‑1 (MQ=60)
AAACAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATG > SRR4302533.2133618/1‑94 (MQ=60)
AACAGGGCGCTAAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGT < SRR4302533.4511509/94‑1 (MQ=60)
ACAGGGCGCTAAATGGGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTC < SRR4302533.3783787/94‑1 (MQ=60)
CAGGGCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCA > SRR4302533.4111484/1‑94 (MQ=60)
CAGGCCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCA < SRR4302533.5070269/94‑1 (MQ=60)
GCGCTCAATGAGCGCTCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAG < SRR4302533.3017450/94‑1 (MQ=60)
GCGCTCAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAG < SRR4302533.3022278/94‑1 (MQ=60)
CAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACA > SRR4302533.3794810/1‑94 (MQ=60)
CAATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACA > SRR4302533.6299032/1‑94 (MQ=60)
CAATGAGCCCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACA < SRR4302533.2373677/94‑1 (MQ=60)
ATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGT < SRR4302533.410707/94‑1 (MQ=60)
ATGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGT > SRR4302533.326385/1‑94 (MQ=60)
TGAGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTA < SRR4302533.1653344/94‑1 (MQ=60)
AGCGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAA < SRR4302533.4167850/94‑1 (MQ=60)
CGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA < SRR4302533.4446741/94‑1 (MQ=60)
CGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA < SRR4302533.4518408/94‑1 (MQ=60)
CGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA > SRR4302533.5604310/1‑94 (MQ=60)
CGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA < SRR4302533.4161447/94‑1 (MQ=60)
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GTTGAGCGCTGGCTGGCACCGAATCTGGGGTATGACGCGGACTGATTCACAAATCTGTCACTTTTCCTT‑ACAACAAACAGGGCGCTCAATGAGTGCCCTGTCTCTTTATTAATATGAAACACTTATACTGGAAACAGGCTGGAATAATCTTAGCCGGAAAAACGAATGTCAAAAGGCACAGTAAAGA > NC_000913/4225046‑4225232
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
