Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 34,120 (T)9→8 coding (146/180 nt) yaaV ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091334,1120T.98.5% 2329.0 / 24.6 520coding (154/180 nt)yaaVhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (3/5);  new base . (237/274);  total (240/280)
Fisher's exact test for biased strand distribution p-value = 7.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 597 total aligned reads displayed.

TGCACGCACAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT  >  NC_000913/34019‑34201
                                                                                             |                                                                                         
tGCACGCACAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGt                                                                                           <  2:7091401/94‑1 (MQ=255)
    cgcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttt                                                                                       >  1:10084081/1‑94 (MQ=255)
     gcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGtttttt                                                                                      >  1:10466482/1‑94 (MQ=255)
     gcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGtttttt                                                                                      <  2:5338369/94‑1 (MQ=255)
      cacaGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttt                                                                                     <  1:3723311/94‑1 (MQ=255)
       acaGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGtttttttt                                                                                    <  2:7857652/94‑1 (MQ=255)
        caGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttg                                                                                   >  1:1368633/1‑93 (MQ=255)
        caGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttg                                                                                   >  1:1450074/1‑93 (MQ=255)
         aGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttgc                                                                                  >  1:7917526/1‑92 (MQ=255)
            tCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCa                                                                              >  1:8552220/1‑94 (MQ=255)
             cAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAt                                                                             >  1:9580858/1‑94 (MQ=255)
             cAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAt                                                                             <  2:3566700/94‑1 (MQ=255)
               aataatAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTa                                                                           >  1:9245387/1‑94 (MQ=255)
               aataatAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTa                                                                           >  2:1503821/1‑94 (MQ=255)
                ataataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTaa                                                                          >  2:1072509/1‑94 (MQ=255)
                ataataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTaa                                                                          >  2:4056296/1‑94 (MQ=255)
                 taataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAg                                                                         <  2:3436794/94‑1 (MQ=255)
                 taataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAg                                                                         <  1:4181980/94‑1 (MQ=255)
                 taataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAg                                                                         <  1:7337953/94‑1 (MQ=255)
                  aataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCTCATTTAGt                                                                        >  1:5973048/1‑94 (MQ=255)
                  aataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTaata                                                                        >  2:9439273/1‑92 (MQ=255)
                   ataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTa                                                                       <  2:5980080/94‑1 (MQ=255)
                   ataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTa                                                                       <  2:7971794/94‑1 (MQ=255)
                     aGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTaaa                                                                     >  2:3797550/1‑94 (MQ=255)
                     aGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCAATTAAGTaaa                                                                     >  1:2077823/1‑94 (MQ=255)
                       cGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATc                                                                   <  1:119909/94‑1 (MQ=255)
                          gtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCttt                                                                <  1:6629193/94‑1 (MQ=255)
                          gtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCttt                                                                <  1:4377168/94‑1 (MQ=255)
                           tCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCtttt                                                               >  1:8824500/1‑94 (MQ=255)
                            cATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTg                                                              <  1:7528088/94‑1 (MQ=255)
                                gCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGa                                                          >  1:8106788/1‑94 (MQ=255)
                                 cAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGaa                                                         >  1:7040633/1‑94 (MQ=255)
                                 cAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGaa                                                         <  2:8232909/94‑1 (MQ=255)
                                    atatTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCg                                                      <  1:1771622/94‑1 (MQ=255)
                                    atatTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCg                                                      >  2:2470063/1‑94 (MQ=255)
                                      atTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGat                                                    >  2:963329/1‑94 (MQ=255)
                                       tttttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGata                                                   <  2:4649653/94‑1 (MQ=255)
                                        ttttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGatat                                                  <  1:4745182/94‑1 (MQ=255)
                                        ttttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGatat                                                  >  1:4989146/1‑94 (MQ=255)
                                          ttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAttt                                                >  2:6761898/1‑94 (MQ=255)
                                           tCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtttt                                               >  1:1631796/1‑94 (MQ=255)
                                            cATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAttttt                                              >  2:6944517/1‑94 (MQ=255)
                                             aTCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtg                                             <  1:10238889/94‑1 (MQ=255)
                                             aTCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtg                                             <  1:6196910/94‑1 (MQ=255)
                                              tCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGCATCGATATTTTtga                                            >  2:6104769/1‑94 (MQ=255)
                                               ccGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgat                                           >  1:3375993/1‑94 (MQ=255)
                                               ccGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgat                                           <  1:2463626/94‑1 (MQ=255)
                                               ccGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgat                                           >  2:2050554/1‑94 (MQ=255)
                                                cGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgatg                                          >  1:5414783/1‑94 (MQ=255)
                                                cGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgatg                                          <  2:6241109/94‑1 (MQ=255)
                                                  cTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAc                                        >  2:753968/1‑94 (MQ=255)
                                                   tAATTTTATCGAATAACTAATACGGTGCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACa                                       <  2:5686470/94‑1 (MQ=255)
                                                   tAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACa                                       <  2:6834371/94‑1 (MQ=255)
                                                    aaTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAt                                      <  2:10329175/94‑1 (MQ=255)
                                                    aaTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAt                                      <  1:2639843/94‑1 (MQ=255)
                                                    aaTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAt                                      >  1:5321725/1‑94 (MQ=255)
                                                     aTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATa                                     >  2:5166838/1‑94 (MQ=255)
                                                     aTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATa                                     <  1:2784653/94‑1 (MQ=255)
                                                      tttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATaa                                    <  2:889248/94‑1 (MQ=255)
                                                       ttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAg                                   <  2:2669856/94‑1 (MQ=255)
                                                       ttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAg                                   >  1:235372/1‑94 (MQ=255)
                                                        tGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGc                                  >  2:5905230/1‑94 (MQ=255)
                                                         gATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCa                                 <  1:3632360/94‑1 (MQ=255)
                                                         gATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCa                                 >  1:5205024/1‑94 (MQ=255)
                                                         gATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCACATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCa                                 <  2:7306494/94‑1 (MQ=255)
                                                          aTCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAg                                <  2:10521308/94‑1 (MQ=255)
                                                          aTCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAg                                <  2:8133783/94‑1 (MQ=255)
                                                          aTCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAg                                >  2:1804482/1‑94 (MQ=255)
                                                             gAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAt                             <  1:1000588/94‑1 (MQ=255)
                                                             gAATAACTAATACAGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAt                             <  2:3118683/94‑1 (MQ=255)
                                                               aTAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAttt                           >  1:3008907/1‑94 (MQ=255)
                                                               aTAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAttt                           >  2:3215186/1‑94 (MQ=255)
                                                                 aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAg                         >  2:4411381/1‑94 (MQ=255)
                                                                 aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAg                         <  2:504731/94‑1 (MQ=255)
                                                                 aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAg                         <  1:5803133/94‑1 (MQ=255)
                                                                  aCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGc                        >  1:9813844/1‑94 (MQ=255)
                                                                  aCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGc                        >  1:8412153/1‑94 (MQ=255)
                                                                    tAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTc                      <  1:8338841/94‑1 (MQ=255)
                                                                    tAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGCAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTc                      >  2:867165/1‑94 (MQ=255)
                                                                     aaTACGGTTCTCTGATGAGGACCG‑TTTTTGTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTca                     <  1:5140508/94‑1 (MQ=255)
                                                                       tACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTcaca                   >  2:3832461/1‑94 (MQ=255)
                                                                        aCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCacac                  <  2:4291333/94‑1 (MQ=255)
                                                                        aCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCacac                  >  1:6901280/1‑94 (MQ=255)
                                                                        aCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCacac                  <  1:3475882/94‑1 (MQ=255)
                                                                         cGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACt                 <  2:4176300/94‑1 (MQ=255)
                                                                         cGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACt                 <  2:1373907/94‑1 (MQ=255)
                                                                          ggTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACtt                >  2:8437251/1‑94 (MQ=255)
                                                                            ttCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTAt              <  1:1139289/94‑1 (MQ=255)
                                                                             tctcTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATc             <  2:9232807/94‑1 (MQ=255)
                                                                                ctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAc          >  2:4765778/1‑94 (MQ=255)
                                                                                ctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAc          <  1:3211044/94‑1 (MQ=255)
                                                                                ctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAc          >  2:897247/1‑94 (MQ=255)
                                                                                 tgatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACg         <  2:372753/94‑1 (MQ=255)
                                                                                  gatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACgg        >  1:7623222/1‑94 (MQ=255)
                                                                                   atgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGt       >  2:10138937/1‑94 (MQ=255)
                                                                                    tgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTg      >  2:6476748/1‑94 (MQ=255)
                                                                                    tgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTg      >  2:5105890/1‑94 (MQ=255)
                                                                                      aGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGCGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGaa    >  1:1310480/1‑94 (MQ=255)
                                                                                        gACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGt  >  1:9066911/1‑94 (MQ=255)
                                                                                        gACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGt  <  1:6524112/94‑1 (MQ=255)
                                                                                             |                                                                                         
TGCACGCACAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT  >  NC_000913/34019‑34201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 303 total aligned reads displayed.
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  >  NC_000913/34027‑34213
                                                                                             |                                                                                             
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATAGGGTTCTCTGATGAGGACCGTTTTTTTTG                                                                                               >  SRR4302545.7125057/1‑94 (MQ=60)
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTG                                                                                               >  SRR4302545.1399261/1‑94 (MQ=60)
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTG                                                                                               >  SRR4302545.1483188/1‑94 (MQ=60)
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTG                                                                                               >  SRR4302545.549755/1‑94 (MQ=60)
  GATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCC                                                                                            <  SRR4302545.178508/94‑1 (MQ=60)
     CAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAT                                                                                         >  SRR4302545.9863218/1‑94 (MQ=60)
     CAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAT                                                                                         >  SRR4302545.7170975/1‑94 (MQ=60)
      AAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATT                                                                                        >  SRR4302545.13871/1‑94 (MQ=60)
      AAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATT                                                                                        >  SRR4302545.6954387/1‑94 (MQ=60)
      AAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑‑TTTTTTTGCCCATTA                                                                                       >  SRR4302545.8217874/1‑94 (MQ=60)
       AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                       >  SRR4302545.9516456/1‑94 (MQ=60)
       AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                       >  SRR4302545.4331496/1‑94 (MQ=60)
       AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                       >  SRR4302545.10326076/1‑94 (MQ=60)
        ATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAA                                                                                      <  SRR4302545.2446659/94‑1 (MQ=60)
        ATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAA                                                                                      >  SRR4302545.7943155/1‑94 (MQ=60)
         TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                     <  SRR4302545.4286375/94‑1 (MQ=60)
         TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                     <  SRR4302545.7543884/94‑1 (MQ=60)
         TAATAGCGTGTCATGGCAGATATCTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACC‑TTTTTTTTTGCCCATTAAG                                                                                     <  SRR4302545.7431575/94‑1 (MQ=60)
          AATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGT                                                                                    >  SRR4302545.6296278/1‑94 (MQ=60)
           ATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                   >  SRR4302545.2737878/1‑94 (MQ=60)
           ATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                   >  SRR4302545.1351694/1‑94 (MQ=60)
           ATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                   >  SRR4302545.2413469/1‑94 (MQ=60)
           ATAGCGTGTCATCGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTACTACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                   <  SRR4302545.3758154/94‑1 (MQ=60)
            tatctTGTCATGGCAGATATTTTGCATCCGCTAATTTGATCGAATAAGTAATACGGTCCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAA                                                                                  <  SRR4302545.8408019/89‑1 (MQ=60)
            TAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAA                                                                                  >  SRR4302545.1890042/1‑94 (MQ=60)
             AGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAA                                                                                 >  SRR4302545.2326950/1‑94 (MQ=60)
              GCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGCTGAGGACCG‑TTTTTTTTGCCCATTAAGTAAAT                                                                                >  SRR4302545.5055849/1‑94 (MQ=60)
               CGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATC                                                                               <  SRR4302545.122628/94‑1 (MQ=60)
               CGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATC                                                                               <  SRR4302545.6675832/94‑1 (MQ=60)
                GTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATC                                                                               <  SRR4302545.7585732/94‑1 (MQ=60)
                GTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCA                                                                              <  SRR4302545.6161764/94‑1 (MQ=60)
                 TGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTT                                                                             >  SRR4302545.8272078/1‑94 (MQ=60)
                 TGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTT                                                                             <  SRR4302545.1311921/94‑1 (MQ=60)
                  GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGTTGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                            >  SRR4302545.3187169/1‑94 (MQ=60)
                  GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                            <  SRR4302545.4487941/94‑1 (MQ=60)
                  GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                            >  SRR4302545.10667783/1‑94 (MQ=60)
                  GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                            <  SRR4302545.6754450/94‑1 (MQ=60)
                   TCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTT                                                                           >  SRR4302545.9080745/1‑94 (MQ=60)
                   GCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTT                                                                           <  SRR4302545.4203080/94‑1 (MQ=60)
                    TATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                          <  SRR4302545.4269981/94‑1 (MQ=60)
                    CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATGCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                          <  SRR4302545.8673052/94‑1 (MQ=60)
                    CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                          >  SRR4302545.6061491/1‑94 (MQ=60)
                    CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                          >  SRR4302545.644313/1‑94 (MQ=60)
                    CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                          <  SRR4302545.7741055/94‑1 (MQ=60)
                     ATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGG                                                                         >  SRR4302545.3817937/1‑94 (MQ=60)
                      TGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGG                                                                        <  SRR4302545.2431846/94‑1 (MQ=60)
                        GCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGA                                                                      <  SRR4302545.10894900/94‑1 (MQ=60)
                        GCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGA                                                                      >  SRR4302545.8340605/1‑94 (MQ=60)
                        GCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGA                                                                      >  SRR4302545.1345157/1‑94 (MQ=60)
                         CAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAA                                                                     <  SRR4302545.9345016/94‑1 (MQ=60)
                          AGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAT                                                                    <  SRR4302545.3474612/94‑1 (MQ=60)
                          AGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAT                                                                    >  SRR4302545.9224982/1‑94 (MQ=60)
                           GATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATC                                                                   <  SRR4302545.5532430/94‑1 (MQ=60)
                            ATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCG                                                                  <  SRR4302545.5699794/94‑1 (MQ=60)
                             TATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGA                                                                 >  SRR4302545.8619043/1‑94 (MQ=60)
                              ATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGCT                                                                >  SRR4302545.4410702/1‑94 (MQ=60)
                              ATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGAT                                                                >  SRR4302545.8767060/1‑94 (MQ=60)
                               ttctgCATCCGCTAATTTGATAGAATAACTAATACGGTTCTCTGAGGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCGTTTGGGGAATCGATA                                                               <  SRR4302545.4196633/89‑1 (MQ=60)
                               TTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATA                                                               >  SRR4302545.7460119/1‑94 (MQ=60)
                               TTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATA                                                               <  SRR4302545.8583212/94‑1 (MQ=60)
                               TTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATA                                                               >  SRR4302545.1207136/1‑94 (MQ=60)
                                TTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAT                                                              >  SRR4302545.5115499/1‑94 (MQ=60)
                                  TTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTT                                                            >  SRR4302545.1462370/1‑94 (MQ=60)
                                   TCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTT                                                           >  SRR4302545.4948068/1‑94 (MQ=60)
                                    CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                          <  SRR4302545.7553658/94‑1 (MQ=60)
                                    CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                          <  SRR4302545.5736121/94‑1 (MQ=60)
                                    CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                          >  SRR4302545.2954218/1‑94 (MQ=60)
                                    CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                          <  SRR4302545.7292056/94‑1 (MQ=60)
                                     ATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTG                                                         <  SRR4302545.10541239/94‑1 (MQ=60)
                                     ATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAAGCTTTTGGGGAATCGATATTTTTG                                                         >  SRR4302545.5989053/1‑94 (MQ=60)
                                       CCGTTAATTTGATAAAATAACGAATACGGTTTTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       <  SRR4302545.2595811/94‑1 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       >  SRR4302545.2950020/1‑94 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       <  SRR4302545.10039116/94‑1 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       <  SRR4302545.8665295/94‑1 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       >  SRR4302545.3458298/1‑94 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       <  SRR4302545.2595812/94‑1 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       <  SRR4302545.10397510/94‑1 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       >  SRR4302545.3458296/1‑94 (MQ=60)
                                       CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                       >  SRR4302545.9745629/1‑94 (MQ=60)
                                        CGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATG                                                      <  SRR4302545.3805848/94‑1 (MQ=60)
                                        CGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATG                                                      >  SRR4302545.5556203/1‑94 (MQ=60)
                                         GCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGA                                                     <  SRR4302545.276406/94‑1 (MQ=60)
                                         GCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGA                                                     >  SRR4302545.1632082/1‑94 (MQ=60)
                                          CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAC                                                    <  SRR4302545.3359641/94‑1 (MQ=60)
                                          CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAC                                                    >  SRR4302545.6168892/1‑94 (MQ=60)
                                          CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTCGGGGAATCGATATTTTTGATGAC                                                    >  SRR4302545.7795705/1‑94 (MQ=60)
                                           TAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACA                                                   <  SRR4302545.3185573/94‑1 (MQ=60)
                                            AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                  >  SRR4302545.5459806/1‑94 (MQ=60)
                                            AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                  <  SRR4302545.9375646/94‑1 (MQ=60)
                                            AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                  <  SRR4302545.2703375/94‑1 (MQ=60)
                                            AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                  <  SRR4302545.3696778/94‑1 (MQ=60)
                                             ATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATA                                                 <  SRR4302545.2851904/94‑1 (MQ=60)
                                               TTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAG                                               >  SRR4302545.240230/1‑94 (MQ=60)
                                               TTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAG                                               >  SRR4302545.8953826/1‑94 (MQ=60)
                                                TGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGC                                              >  SRR4302545.1859472/1‑94 (MQ=60)
                                                 GATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCA                                             <  SRR4302545.8379181/94‑1 (MQ=60)
                                                 GATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCA                                             <  SRR4302545.3720981/94‑1 (MQ=60)
                                                 GATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCA                                             >  SRR4302545.5339109/1‑94 (MQ=60)
                                                   actAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGG                                           <  SRR4302545.1051380/91‑1 (MQ=60)
                                                    CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                          >  SRR4302545.1714452/1‑94 (MQ=60)
                                                    CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                          >  SRR4302545.10366694/1‑94 (MQ=60)
                                                    CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                          <  SRR4302545.2855975/94‑1 (MQ=60)
                                                     GAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAT                                         <  SRR4302545.261413/94‑1 (MQ=60)
                                                     GAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAT                                         <  SRR4302545.1022749/94‑1 (MQ=60)
                                                     GAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAT                                         <  SRR4302545.1282114/94‑1 (MQ=60)
                                                      AATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATT                                        >  SRR4302545.1417948/1‑94 (MQ=60)
                                                      AATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATT                                        <  SRR4302545.3433210/94‑1 (MQ=60)
                                                       ATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTT                                       >  SRR4302545.7831967/1‑94 (MQ=60)
                                                       ATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTT                                       >  SRR4302545.3643600/1‑94 (MQ=60)
                                                       ATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTT                                       >  SRR4302545.3082377/1‑94 (MQ=60)
                                                       ATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTT                                       >  SRR4302545.5323353/1‑94 (MQ=60)
                                                        TAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTA                                      <  SRR4302545.10903583/94‑1 (MQ=60)
                                                        TAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTA                                      >  SRR4302545.711346/1‑94 (MQ=60)
                                                         AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                     >  SRR4302545.1178290/1‑94 (MQ=60)
                                                         AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                     >  SRR4302545.904993/1‑94 (MQ=60)
                                                         AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                     <  SRR4302545.8897857/94‑1 (MQ=60)
                                                          ACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGGTTTAGC                                    <  SRR4302545.5357777/94‑1 (MQ=60)
                                                          ACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGC                                    >  SRR4302545.10105441/1‑94 (MQ=60)
                                                          ACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGC                                    >  SRR4302545.8655523/1‑94 (MQ=60)
                                                           CTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCT                                   <  SRR4302545.1271519/94‑1 (MQ=60)
                                                           CTAATACGGTTCTCTGATGAGGACCG‑TTTTCTTTGCCCATTAAGTAAATCTTTTGGGGAATCTATATTTTTGATGACATAAGCAGGATTTAGCT                                   <  SRR4302545.5311867/94‑1 (MQ=60)
                                                            TAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTC                                  >  SRR4302545.4654876/1‑94 (MQ=60)
                                                            TAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTC                                  <  SRR4302545.8580470/94‑1 (MQ=60)
                                                            TAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTC                                  >  SRR4302545.10925484/1‑94 (MQ=60)
                                                            TAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTC                                  >  SRR4302545.3726529/1‑94 (MQ=60)
                                                            TAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTC                                  <  SRR4302545.4789548/94‑1 (MQ=60)
                                                             AATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCA                                 <  SRR4302545.5272528/94‑1 (MQ=60)
                                                             AATACGGTTCTCTGATGAGGACCG‑TTTTTGTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCA                                 <  SRR4302545.5272529/94‑1 (MQ=60)
                                                              ATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCA                                 >  SRR4302545.2760697/1‑94 (MQ=60)
                                                              ATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCAC                                <  SRR4302545.539832/94‑1 (MQ=60)
                                                              ATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCAC                                <  SRR4302545.8033008/94‑1 (MQ=60)
                                                              ATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTCAGCTCAC                                <  SRR4302545.9707761/94‑1 (MQ=60)
                                                               TACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACA                               <  SRR4302545.7788061/94‑1 (MQ=60)
                                                               TACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACA                               >  SRR4302545.923322/1‑94 (MQ=60)
                                                                ACGGTTCTCTGATGAGGACTG‑TTTTTTTTGCCCATTAAGTCAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAA                              >  SRR4302545.7091345/1‑94 (MQ=60)
                                                                ACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAC                              <  SRR4302545.3561052/94‑1 (MQ=60)
                                                                 CGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACT                             <  SRR4302545.2087924/94‑1 (MQ=60)
                                                                  GGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACT                             >  SRR4302545.5793070/1‑94 (MQ=60)
                                                                  GGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTT                            <  SRR4302545.6788475/94‑1 (MQ=60)
                                                                  GGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTT                            <  SRR4302545.502722/94‑1 (MQ=60)
                                                                  GGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTT                            >  SRR4302545.9443347/1‑94 (MQ=60)
                                                                    TTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTAT                          <  SRR4302545.1164236/94‑1 (MQ=60)
                                                                    TTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTAT                          <  SRR4302545.4552592/94‑1 (MQ=60)
                                                                    TTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTAT                          >  SRR4302545.5465298/1‑94 (MQ=60)
                                                                     TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                         <  SRR4302545.23107/94‑1 (MQ=60)
                                                                     TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                         <  SRR4302545.8132168/94‑1 (MQ=60)
                                                                     TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                         <  SRR4302545.9928865/94‑1 (MQ=60)
                                                                     TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                         <  SRR4302545.904351/94‑1 (MQ=60)
                                                                     TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                         <  SRR4302545.10634344/94‑1 (MQ=60)
                                                                      CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                        >  SRR4302545.9737014/1‑94 (MQ=60)
                                                                      CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                        >  SRR4302545.6348493/1‑94 (MQ=60)
                                                                      CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                        <  SRR4302545.7061941/94‑1 (MQ=60)
                                                                      CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                        <  SRR4302545.2002442/94‑1 (MQ=60)
                                                                       TCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGA                       >  SRR4302545.3125953/1‑94 (MQ=60)
                                                                        CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGTAATCGATAGTTTTGATGACATAAGCAGGATTTAGCTCACACTTAGCGAC                      <  SRR4302545.7623182/94‑1 (MQ=60)
                                                                        CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                      >  SRR4302545.10178856/1‑94 (MQ=60)
                                                                        CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                      <  SRR4302545.3289728/94‑1 (MQ=60)
                                                                        CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                      >  SRR4302545.3464482/1‑94 (MQ=60)
                                                                        CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                      <  SRR4302545.1669396/94‑1 (MQ=60)
                                                                         TGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACG                     <  SRR4302545.5312086/94‑1 (MQ=60)
                                                                         TGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACG                     >  SRR4302545.1595320/1‑94 (MQ=60)
                                                                           ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                   >  SRR4302545.3616268/1‑94 (MQ=60)
                                                                           ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                   <  SRR4302545.2179874/94‑1 (MQ=60)
                                                                           ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                   <  SRR4302545.5180011/94‑1 (MQ=60)
                                                                           ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                   >  SRR4302545.3989695/1‑94 (MQ=60)
                                                                            TGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTG                  <  SRR4302545.8508109/94‑1 (MQ=60)
                                                                              AGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAA                <  SRR4302545.7279411/94‑1 (MQ=60)
                                                                              AGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAA                <  SRR4302545.6066701/94‑1 (MQ=60)
                                                                              AGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGCGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAA                >  SRR4302545.1339567/1‑94 (MQ=60)
                                                                              AGGA‑CGTTTCTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGCGAA                <  SRR4302545.4928631/94‑1 (MQ=60)
                                                                               GGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG               >  SRR4302545.8361707/1‑94 (MQ=60)
                                                                               GGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG               <  SRR4302545.5163649/94‑1 (MQ=60)
                                                                                GACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT              >  SRR4302545.9331833/1‑94 (MQ=60)
                                                                                GACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT              <  SRR4302545.6702591/94‑1 (MQ=60)
                                                                                 ACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             >  SRR4302545.3757635/1‑94 (MQ=60)
                                                                                 ACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             >  SRR4302545.6578125/1‑94 (MQ=60)
                                                                                 ACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             >  SRR4302545.8889804/1‑94 (MQ=60)
                                                                                 ACCG‑TTTTTTTTGCCCAATAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             <  SRR4302545.2639781/94‑1 (MQ=60)
                                                                                  gccgTTTTTGTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             <  SRR4302545.6779723/90‑1 (MQ=60)
                                                                                  accgttaTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT             <  SRR4302545.9048329/87‑1 (MQ=60)
                                                                                  CCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTG            <  SRR4302545.6964103/94‑1 (MQ=60)
                                                                                     GTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGTTGCCTTAACCAGGATTTAGTTCACCCTTTTCACGGGTGAAGTTGCA          >  SRR4302545.4056755/1‑94 (MQ=46)
                                                                                       TTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCATACTTATCGACGGTGAAGTTGCATA        >  SRR4302545.5773730/1‑94 (MQ=60)
                                                                                       TTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATA        <  SRR4302545.2177433/94‑1 (MQ=60)
                                                                                       TTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATA        >  SRR4302545.6076930/1‑94 (MQ=60)
                                                                                        TTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATAC       >  SRR4302545.1423441/1‑94 (MQ=60)
                                                                                         TTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACT      <  SRR4302545.10324240/94‑1 (MQ=60)
                                                                                         TTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACT      <  SRR4302545.7190295/94‑1 (MQ=60)
                                                                                          TTTTGCCCATTAAGTAAATTTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTA     <  SRR4302545.4614975/94‑1 (MQ=60)
                                                                                          TTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTA     <  SRR4302545.6947316/94‑1 (MQ=60)
                                                                                           TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT    <  SRR4302545.8873367/94‑1 (MQ=60)
                                                                                           TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT    <  SRR4302545.4817413/94‑1 (MQ=60)
                                                                                           TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT    >  SRR4302545.125778/1‑94 (MQ=60)
                                                                                            TTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC   <  SRR4302545.7836201/94‑1 (MQ=60)
                                                                                            TTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC   <  SRR4302545.6888672/94‑1 (MQ=60)
                                                                                             TGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  <  SRR4302545.967347/94‑1 (MQ=60)
                                                                                             TGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  <  SRR4302545.5552685/94‑1 (MQ=60)
                                                                                             TGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  <  SRR4302545.8522927/94‑1 (MQ=60)
                                                                                             TGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  <  SRR4302545.8069026/94‑1 (MQ=60)
                                                                                             TGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATAGACGGTGAAGTTGCATACTATCG  >  SRR4302545.7791582/1‑94 (MQ=60)
                                                                                             |                                                                                             
CAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATCG  >  NC_000913/34027‑34213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑