Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 882 254.4 12957588 98.0% 12698436 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 34,120 (T)9→8 coding (146/180 nt) yaaV ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091334,1120T.99.6% 1259.6 / ‑3.3 267coding (154/180 nt)yaaVhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base . (129/137);  minor base A (0/1);  total (129/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 294 total aligned reads displayed.

CACGCACAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG  >  NC_000913/34021‑34200
                                                                                           |                                                                                        
cacgcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGtt                                                                                         <  2:3230768/93‑1 (MQ=255)
 acgcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttt                                                                                        >  2:2124386/1‑93 (MQ=255)
   gcacAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATACCTAATACGGTTCTCTGATGAGGACCGttttt                                                                                      <  1:2145916/93‑1 (MQ=255)
     acaGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttt                                                                                    <  1:1941873/93‑1 (MQ=255)
      caGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGtttttttt                                                                                   >  2:493141/1‑93 (MQ=255)
        gATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttgc                                                                                 >  1:5776704/1‑91 (MQ=255)
         aTCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttgcc                                                                                <  2:2074862/93‑4 (MQ=255)
         aTCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttgcc                                                                                <  1:2043996/93‑4 (MQ=255)
          tCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGttttttttgccc                                                                               <  1:3156685/93‑5 (MQ=255)
           cAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCa                                                                             <  2:5809860/93‑1 (MQ=255)
           cAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCa                                                                             >  1:4465050/1‑93 (MQ=255)
             aataatAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAtt                                                                           <  1:1025506/93‑1 (MQ=255)
               taataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTaa                                                                         >  2:2574206/1‑93 (MQ=255)
                aataGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAg                                                                        >  2:1375465/1‑93 (MQ=255)
                  taGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTa                                                                      >  1:3685213/1‑93 (MQ=255)
                    gCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTaaa                                                                    >  2:4439173/1‑93 (MQ=255)
                    gCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTaaa                                                                    <  2:4029706/93‑1 (MQ=255)
                    gCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTaaa                                                                    <  1:3621294/93‑1 (MQ=255)
                    gCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACCAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTaaa                                                                    >  1:3217474/1‑93 (MQ=255)
                      gtgtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATc                                                                  <  2:565833/93‑1 (MQ=255)
                      gtgtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑GTTTTTTTGCCCCTTAAGTAAATc                                                                  >  2:4528645/1‑93 (MQ=255)
                       tgtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCt                                                                 >  1:2737343/1‑93 (MQ=255)
                        gtCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCtt                                                                >  2:2832603/1‑93 (MQ=255)
                         tCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCttt                                                               <  2:61051/93‑1 (MQ=255)
                           acggCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTGTTTTGCCCATTAAGTAAATCTTTTg                                                             >  1:6250384/3‑93 (MQ=255)
                           aTGGCAGATATTTTTCATCCGCTAATTTGATCGAATACCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTg                                                             <  1:907525/93‑1 (MQ=255)
                            tGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTgg                                                            >  2:6227988/1‑93 (MQ=255)
                            tGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTgg                                                            >  2:3763289/1‑93 (MQ=255)
                            tGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTgg                                                            <  2:5260253/93‑1 (MQ=255)
                            tGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTgg                                                            <  2:1214796/93‑1 (MQ=255)
                               cAGATATTTTTCATCCGCTAATTTGATCGTATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGTCCATTAAGTAAATCTTTTGGGGa                                                         >  2:5831860/1‑93 (MQ=255)
                               cAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGa                                                         <  2:2530483/93‑1 (MQ=255)
                                 gATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAt                                                       >  2:908746/1‑93 (MQ=255)
                                 gATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAt                                                       >  2:6462174/1‑93 (MQ=255)
                                 gATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAt                                                       <  1:299588/93‑1 (MQ=255)
                                  atatTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATc                                                      <  1:4945802/93‑1 (MQ=255)
                                  atatTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATc                                                      >  2:5339566/1‑93 (MQ=255)
                                    atTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGa                                                    <  2:1841084/93‑1 (MQ=255)
                                    atTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGa                                                    <  2:5034026/93‑1 (MQ=255)
                                     tttttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGat                                                   <  1:844912/93‑1 (MQ=255)
                                     tttttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGat                                                   >  1:221377/1‑93 (MQ=255)
                                       tttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGatat                                                 <  1:4026038/93‑1 (MQ=255)
                                       tttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGatat                                                 >  1:1406610/1‑93 (MQ=255)
                                       tttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGatat                                                 <  1:34107/93‑1 (MQ=255)
                                        ttCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtt                                                <  1:5560534/93‑1 (MQ=255)
                                         tCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAttt                                               <  2:508757/93‑1 (MQ=255)
                                         tCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAttt                                               >  1:2635099/1‑93 (MQ=255)
                                          cATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtttt                                              >  2:432103/1‑93 (MQ=255)
                                          cATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtttt                                              <  1:1133282/93‑1 (MQ=255)
                                          cATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtttt                                              >  1:5099434/1‑93 (MQ=255)
                                          cATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAtttt                                              <  1:5294841/93‑1 (MQ=255)
                                           aTCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAttttt                                             >  2:3729594/1‑93 (MQ=255)
                                            tCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtg                                            >  1:1695786/1‑93 (MQ=255)
                                            tCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtg                                            >  2:3905094/1‑93 (MQ=255)
                                             ccGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtga                                           <  2:4157947/93‑1 (MQ=255)
                                              cGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgat                                          <  2:5164707/93‑1 (MQ=255)
                                               gCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGTACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTtgatg                                         <  2:103382/93‑1 (MQ=255)
                                                 tAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAc                                       >  2:1736052/1‑93 (MQ=255)
                                                 tAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAc                                       >  1:6390896/1‑93 (MQ=255)
                                                 tAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAc                                       >  2:3179875/1‑93 (MQ=255)
                                                 tAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTATGGGGAATCGATATTTTTGATGAc                                       <  2:14605/93‑1 (MQ=255)
                                                  aaTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACa                                      >  2:1111427/1‑93 (MQ=255)
                                                  aaTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACa                                      >  2:4751807/1‑93 (MQ=255)
                                                   aTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAt                                     <  1:501439/93‑1 (MQ=255)
                                                   aTTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAt                                     <  2:4677512/93‑1 (MQ=255)
                                                    tttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATa                                    <  1:654396/93‑1 (MQ=255)
                                                    tttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATa                                    >  1:3896646/1‑93 (MQ=255)
                                                     ttGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATaa                                   <  2:4843315/93‑1 (MQ=255)
                                                      tGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAg                                  <  2:3393151/93‑1 (MQ=255)
                                                      tGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAg                                  <  1:2832603/93‑1 (MQ=255)
                                                      tGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAg                                  <  2:5419705/93‑1 (MQ=255)
                                                       gATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGc                                 >  1:942111/1‑93 (MQ=255)
                                                        aTCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCa                                <  1:5900564/93‑1 (MQ=255)
                                                           gAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGa                             >  1:6024568/1‑93 (MQ=255)
                                                             aTAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAtt                           <  2:5478793/93‑1 (MQ=255)
                                                              tAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAttt                          <  1:4508916/93‑1 (MQ=255)
                                                               aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTa                         <  2:607350/93‑1 (MQ=255)
                                                               aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTa                         <  1:2458625/93‑1 (MQ=255)
                                                               aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTa                         <  2:3600887/93‑1 (MQ=255)
                                                               aaCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTa                         <  1:1350373/93‑1 (MQ=255)
                                                                    aTACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTcc                    >  1:3072286/1‑92 (MQ=255)
                                                                    aTACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTca                    >  1:3940671/1‑93 (MQ=255)
                                                                     tACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTcac                   >  2:770853/1‑93 (MQ=255)
                                                                      aCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTcaca                  <  1:5053811/93‑1 (MQ=255)
                                                                      aCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTcaca                  <  1:431139/93‑1 (MQ=255)
                                                                       cGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCacac                 >  2:3129752/1‑93 (MQ=255)
                                                                        ggTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACt                <  2:2932629/93‑1 (MQ=255)
                                                                            ctctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATc            <  1:1068446/93‑1 (MQ=255)
                                                                            ctctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATc            >  2:4732039/1‑93 (MQ=255)
                                                                              ctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGa          <  1:4192350/93‑1 (MQ=255)
                                                                              ctGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGa          <  2:155140/93‑1 (MQ=255)
                                                                               tgatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAc         >  1:4732967/1‑93 (MQ=255)
                                                                               tgatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAc         >  1:2297052/1‑93 (MQ=255)
                                                                                gatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACg        >  1:5257282/1‑93 (MQ=255)
                                                                                gatgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACg        >  2:2207268/1‑93 (MQ=255)
                                                                                 atgaGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACgg       <  1:4394357/93‑1 (MQ=255)
                                                                                    aGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGa    <  2:6149381/93‑1 (MQ=255)
                                                                                     ggACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGaa   <  1:4638477/93‑1 (MQ=255)
                                                                                     ggACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGaa   <  1:6294113/93‑1 (MQ=255)
                                                                                     ggACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGaa   >  1:6445196/1‑93 (MQ=255)
                                                                                           |                                                                                        
CACGCACAGATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG  >  NC_000913/34021‑34200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC  >  NC_000913/34030‑34212
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ATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCC                                                                                          <  SRR4302537.2058306/94‑1 (MQ=60)
 TCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCA                                                                                         >  SRR4302537.4495930/1‑94 (MQ=60)
 TCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCA                                                                                         <  SRR4302537.3178846/94‑1 (MQ=60)
 TCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCA                                                                                         >  SRR4302537.3141299/1‑94 (MQ=60)
  CAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCAT                                                                                        <  SRR4302537.3940969/94‑1 (MQ=60)
   AAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATT                                                                                       <  SRR4302537.2492514/94‑1 (MQ=60)
   AAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATT                                                                                       >  SRR4302537.3994767/1‑94 (MQ=60)
    AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGGTCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                      >  SRR4302537.3485303/1‑94 (MQ=60)
    AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                      <  SRR4302537.1032563/94‑1 (MQ=60)
    AATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTA                                                                                      >  SRR4302537.388921/1‑94 (MQ=60)
      TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                    <  SRR4302537.2950160/94‑1 (MQ=60)
      TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                    <  SRR4302537.5106970/94‑1 (MQ=60)
      TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                    >  SRR4302537.2072320/1‑94 (MQ=60)
      TAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAG                                                                                    >  SRR4302537.4502683/1‑94 (MQ=60)
       AATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGT                                                                                   <  SRR4302537.1265748/94‑1 (MQ=60)
       AATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGT                                                                                   >  SRR4302537.2760765/1‑94 (MQ=60)
        ATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                  >  SRR4302537.3711133/1‑94 (MQ=60)
        ATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTA                                                                                  >  SRR4302537.4667900/1‑94 (MQ=60)
         TAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAA                                                                                 <  SRR4302537.2255846/94‑1 (MQ=60)
          AGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACCAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAA                                                                                >  SRR4302537.3240113/1‑94 (MQ=60)
           GCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAAT                                                                               <  SRR4302537.3646813/94‑1 (MQ=60)
           GCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAAT                                                                               <  SRR4302537.2356767/94‑1 (MQ=60)
            CGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATC                                                                              <  SRR4302537.5922770/94‑1 (MQ=60)
             GTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCT                                                                             >  SRR4302537.2756449/1‑94 (MQ=60)
              TGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTT                                                                            >  SRR4302537.4498050/1‑94 (MQ=60)
               GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                           <  SRR4302537.1866696/94‑1 (MQ=60)
               GTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTT                                                                           <  SRR4302537.1405649/94‑1 (MQ=60)
                 CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                         >  SRR4302537.531347/1‑94 (MQ=60)
                 CATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTG                                                                         >  SRR4302537.3009730/1‑94 (MQ=60)
                 CACGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTGTTTTGCCCATTAAGTAAATCTTTTG                                                                         >  SRR4302537.6293322/1‑94 (MQ=60)
                  ATGGCAGATATTTTTCATCCGCTAATTTGATCGAATACCTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGG                                                                        <  SRR4302537.913796/94‑1 (MQ=60)
                  ATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGG                                                                        <  SRR4302537.2303324/94‑1 (MQ=60)
                  ATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGG                                                                        <  SRR4302537.1978745/94‑1 (MQ=60)
                  ATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGG                                                                        >  SRR4302537.5802833/1‑94 (MQ=60)
                   TGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGG                                                                       <  SRR4302537.5980778/94‑1 (MQ=60)
                    GGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGG                                                                      <  SRR4302537.1087587/94‑1 (MQ=60)
                     GCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGA                                                                     >  SRR4302537.4928308/1‑94 (MQ=60)
                     GCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGA                                                                     <  SRR4302537.4574432/94‑1 (MQ=60)
                      CAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAA                                                                    >  SRR4302537.6489343/1‑94 (MQ=60)
                      CAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAA                                                                    <  SRR4302537.4027420/94‑1 (MQ=60)
                       AGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAT                                                                   >  SRR4302537.983984/1‑94 (MQ=60)
                       AGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAAT                                                                   <  SRR4302537.6296936/94‑1 (MQ=60)
                        GATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATC                                                                  <  SRR4302537.301677/94‑1 (MQ=60)
                         ATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCG                                                                 <  SRR4302537.4979904/94‑1 (MQ=60)
                         ATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCG                                                                 >  SRR4302537.6458479/1‑94 (MQ=60)
                         ATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCG                                                                 >  SRR4302537.5858767/1‑94 (MQ=60)
                         ATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCG                                                                 <  SRR4302537.1803324/94‑1 (MQ=60)
                          TATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGA                                                                >  SRR4302537.5503328/1‑94 (MQ=60)
                          TATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGA                                                                >  SRR4302537.5387665/1‑94 (MQ=60)
                           ATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGAT                                                               >  SRR4302537.222957/1‑94 (MQ=60)
                            TTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATA                                                              <  SRR4302537.850703/94‑1 (MQ=60)
                             TTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAT                                                             >  SRR4302537.1416405/1‑94 (MQ=60)
                             TTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAT                                                             <  SRR4302537.3268514/94‑1 (MQ=60)
                             TTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATAT                                                             <  SRR4302537.4242421/94‑1 (MQ=60)
                              TTTCATCCGCTAATTTGATCGAATAACTAATTCGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATT                                                            <  SRR4302537.5098764/94‑1 (MQ=60)
                              TTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATT                                                            <  SRR4302537.5719850/94‑1 (MQ=60)
                              TTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATT                                                            <  SRR4302537.34376/94‑1 (MQ=60)
                              TTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATT                                                            <  SRR4302537.4054224/94‑1 (MQ=60)
                               TTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTT                                                           >  SRR4302537.2653539/1‑94 (MQ=60)
                               TTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTT                                                           <  SRR4302537.5598529/94‑1 (MQ=60)
                                TCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTT                                                          >  SRR4302537.5134567/1‑94 (MQ=60)
                                TCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTT                                                          >  SRR4302537.3564467/1‑94 (MQ=60)
                                 CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                         >  SRR4302537.3025472/1‑94 (MQ=60)
                                 CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                         <  SRR4302537.1141150/94‑1 (MQ=60)
                                 CATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTT                                                         <  SRR4302537.5331224/94‑1 (MQ=60)
                                  ATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTG                                                        >  SRR4302537.1037087/1‑94 (MQ=60)
                                  ATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTG                                                        >  SRR4302537.1707650/1‑94 (MQ=60)
                                  ATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTG                                                        >  SRR4302537.5264176/1‑94 (MQ=60)
                                    CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTTAT                                                      >  SRR4302537.6467190/1‑94 (MQ=60)
                                    CCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGAT                                                      <  SRR4302537.2774206/94‑1 (MQ=60)
                                     ctctaatttgatcgaataccaaatccgttccgctaATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATG                                                     <  SRR4302537.3942073/59‑1 (MQ=60)
                                     CGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATG                                                     >  SRR4302537.2464739/1‑94 (MQ=60)
                                       CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAC                                                   <  SRR4302537.3710967/94‑1 (MQ=60)
                                       CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAC                                                   >  SRR4302537.6434435/1‑94 (MQ=60)
                                       CTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGAC                                                   <  SRR4302537.6281041/94‑1 (MQ=60)
                                        TAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACA                                                  >  SRR4302537.4341671/1‑94 (MQ=60)
                                        TAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACA                                                  >  SRR4302537.919094/1‑94 (MQ=60)
                                        TAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACA                                                  >  SRR4302537.950664/1‑94 (MQ=60)
                                         AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                 >  SRR4302537.2703649/1‑94 (MQ=60)
                                         AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                 <  SRR4302537.897527/94‑1 (MQ=60)
                                         AATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACAT                                                 <  SRR4302537.2615106/94‑1 (MQ=60)
                                          ATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATA                                                >  SRR4302537.3923887/1‑94 (MQ=60)
                                          ATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATA                                                >  SRR4302537.1093134/1‑94 (MQ=60)
                                          ATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATA                                                <  SRR4302537.504887/94‑1 (MQ=60)
                                           TTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAA                                               <  SRR4302537.658852/94‑1 (MQ=60)
                                           TTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAA                                               <  SRR4302537.4788889/94‑1 (MQ=60)
                                           TTTAATCGAATAACTAATACGGTTCTCTGATAAGGACC‑ATTTTTTATGCACATTAAGTAAAACTTTTGGGGATTCGATATTTTAGATAACATAA                                               <  SRR4302537.6514640/94‑1 (MQ=39)
                                            TTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAG                                              <  SRR4302537.605223/94‑1 (MQ=60)
                                            TTGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAG                                              <  SRR4302537.5011300/94‑1 (MQ=60)
                                             TGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGC                                             >  SRR4302537.948610/1‑94 (MQ=60)
                                             TGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGC                                             >  SRR4302537.3374556/1‑94 (MQ=60)
                                             TGATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGC                                             <  SRR4302537.2852393/94‑1 (MQ=60)
                                              GATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCA                                            >  SRR4302537.4184928/1‑94 (MQ=60)
                                              GATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCA                                            <  SRR4302537.2101287/94‑1 (MQ=60)
                                               ATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAG                                           <  SRR4302537.5941055/94‑1 (MQ=60)
                                               ATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAG                                           <  SRR4302537.4675969/94‑1 (MQ=60)
                                               ATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAG                                           >  SRR4302537.4296928/1‑94 (MQ=60)
                                               ATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAG                                           <  SRR4302537.3694995/94‑1 (MQ=60)
                                               ATCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAG                                           >  SRR4302537.1167114/1‑94 (MQ=60)
                                                TCGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGG                                          >  SRR4302537.1645040/1‑94 (MQ=60)
                                                 CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                         <  SRR4302537.6385829/94‑1 (MQ=60)
                                                 CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                         >  SRR4302537.8690/1‑94 (MQ=60)
                                                 CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                         >  SRR4302537.6065966/1‑94 (MQ=60)
                                                 CGAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGA                                         >  SRR4302537.4990211/1‑94 (MQ=60)
                                                  GAATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGAT                                        <  SRR4302537.6137119/94‑1 (MQ=60)
                                                   AATAACTAATACGGTTCTCTGATGAGTACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATT                                       <  SRR4302537.1397788/94‑1 (MQ=60)
                                                   AATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATT                                       >  SRR4302537.2167294/1‑94 (MQ=60)
                                                    ATAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTT                                      >  SRR4302537.5208886/1‑94 (MQ=60)
                                                     TAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGTATCGATATTTTTGATGACATAAGCAGGATTTA                                     >  SRR4302537.4427080/1‑94 (MQ=60)
                                                     TAACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTA                                     <  SRR4302537.4540094/94‑1 (MQ=60)
                                                      AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                    <  SRR4302537.2475918/94‑1 (MQ=60)
                                                      AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                    <  SRR4302537.1359781/94‑1 (MQ=60)
                                                      AACTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAG                                    <  SRR4302537.2019608/94‑1 (MQ=60)
                                                        CTAATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCT                                  <  SRR4302537.3834903/94‑1 (MQ=60)
                                                          AATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCC                                >  SRR4302537.3093688/1‑94 (MQ=60)
                                                          AATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCA                                >  SRR4302537.3968220/1‑94 (MQ=60)
                                                           ATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCCTTAAGTAAATCTTTTTGGGAATCGATATTTTTGATGACATAAGGAGGATTTATCTCAC                               >  SRR4302537.2691413/1‑94 (MQ=60)
                                                           ATACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCAC                               >  SRR4302537.634509/1‑94 (MQ=60)
                                                             ACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAC                             <  SRR4302537.5088604/94‑1 (MQ=60)
                                                             ACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAC                             <  SRR4302537.4760405/94‑1 (MQ=60)
                                                             ACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAC                             >  SRR4302537.720252/1‑94 (MQ=60)
                                                             ACGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACAC                             <  SRR4302537.434144/94‑1 (MQ=60)
                                                              CGGTTCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACT                            <  SRR4302537.420700/94‑1 (MQ=60)
                                                                  TCTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATC                        <  SRR4302537.3228687/94‑1 (MQ=60)
                                                                   CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                       <  SRR4302537.1075811/94‑1 (MQ=60)
                                                                   CTCTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCG                       >  SRR4302537.4456617/1‑94 (MQ=60)
                                                                     CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                     <  SRR4302537.4221631/94‑1 (MQ=60)
                                                                     CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                     >  SRR4302537.934672/1‑94 (MQ=60)
                                                                     CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                     >  SRR4302537.4765667/1‑94 (MQ=60)
                                                                     CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                     >  SRR4302537.2313266/1‑94 (MQ=60)
                                                                     CTGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGAC                     <  SRR4302537.5310895/94‑1 (MQ=60)
                                                                      TGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACG                    >  SRR4302537.5293461/1‑94 (MQ=60)
                                                                      TGATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACG                    >  SRR4302537.3027228/1‑94 (MQ=60)
                                                                        ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                  >  SRR4302537.1479046/1‑94 (MQ=60)
                                                                        ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                  <  SRR4302537.4424674/94‑1 (MQ=60)
                                                                        ATGAGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGT                  <  SRR4302537.3211290/94‑1 (MQ=60)
                                                                           AGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAA               >  SRR4302537.43752/1‑94 (MQ=60)
                                                                           AGGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAA               >  SRR4302537.6488921/1‑94 (MQ=60)
                                                                            GGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG              <  SRR4302537.4670557/94‑1 (MQ=60)
                                                                            GGACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAG              <  SRR4302537.6337233/94‑1 (MQ=60)
                                                                             GACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT             <  SRR4302537.5078564/94‑1 (MQ=60)
                                                                             GACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT             >  SRR4302537.5744871/1‑94 (MQ=60)
                                                                             GACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGT             <  SRR4302537.679360/94‑1 (MQ=60)
                                                                              ACCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTT            >  SRR4302537.6304081/1‑94 (MQ=60)
                                                                               CCG‑TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTG           <  SRR4302537.4356316/94‑1 (MQ=60)
                                                                                 cgTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGC          >  SRR4302537.2594847/3‑94 (MQ=60)
                                                                                 cgTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGC          >  SRR4302537.4859069/3‑94 (MQ=60)
                                                                                  GTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTTCA         >  SRR4302537.810675/1‑94 (MQ=60)
                                                                                  GTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCA         >  SRR4302537.4010042/1‑94 (MQ=60)
                                                                                  GTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCA         <  SRR4302537.3987386/94‑1 (MQ=60)
                                                                                   TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCAT        <  SRR4302537.2589631/94‑1 (MQ=60)
                                                                                   TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCAT        >  SRR4302537.714954/1‑94 (MQ=60)
                                                                                   TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCAT        <  SRR4302537.6415479/94‑1 (MQ=60)
                                                                                   TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCAT        <  SRR4302537.3183026/94‑1 (MQ=60)
                                                                                   TTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCAT        >  SRR4302537.125809/1‑94 (MQ=60)
                                                                                     TTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATAC      >  SRR4302537.3868127/1‑94 (MQ=60)
                                                                                     TTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATAC      <  SRR4302537.2344320/94‑1 (MQ=60)
                                                                                      TTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACT     <  SRR4302537.2490154/94‑1 (MQ=60)
                                                                                      TTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACT     >  SRR4302537.2682331/1‑94 (MQ=60)
                                                                                        TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT   <  SRR4302537.2233853/94‑1 (MQ=60)
                                                                                        TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT   <  SRR4302537.3104871/94‑1 (MQ=60)
                                                                                        TTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTAT   <  SRR4302537.231164/94‑1 (MQ=60)
                                                                                         TTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC  <  SRR4302537.3088749/94‑1 (MQ=60)
                                                                                         TTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC  >  SRR4302537.3570377/1‑94 (MQ=60)
                                                                                         TTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC  <  SRR4302537.4351144/94‑1 (MQ=60)
                                                                                          |                                                                                            
ATCAAATAATAGCGTGTCATGGCAGATATTTTTCATCCGCTAATTTGATCGAATAACTAATACGGTTCTCTGATGAGGACCGTTTTTTTTTGCCCATTAAGTAAATCTTTTGGGGAATCGATATTTTTGATGACATAAGCAGGATTTAGCTCACACTTATCGACGGTGAAGTTGCATACTATC  >  NC_000913/34030‑34212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑