Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 260,837 A→G A37A (GCA→GCG)  proA → gamma‑glutamylphosphate reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913260,8370AG99.0% 1274.4 / ‑2.0 383A37A (GCA→GCG) proAgamma‑glutamylphosphate reductase
Reads supporting (aligned to +/- strand):  ref base A (3/1);  new base G (192/187);  total (195/188)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.83e-01

Only 100 of 417 total aligned reads displayed.

TTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCAC  >  NC_000913/260746‑260928
                                                                                           |                                                                                           
 tGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCaa                                                                                          >  2:3649199/1‑94 (MQ=255)
 tGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCaa                                                                                          >  2:4198926/1‑94 (MQ=255)
 tGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCaa                                                                                          <  1:4048873/94‑1 (MQ=255)
   ccGCGAAGCAAGCTTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAg                                                                                        <  1:7417189/94‑1 (MQ=255)
   ccGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAg                                                                                        <  1:3402101/94‑1 (MQ=255)
    cgcgAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGc                                                                                       >  2:535161/1‑94 (MQ=255)
    cgcgAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGc                                                                                       <  2:2848050/94‑1 (MQ=255)
    cgcgAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGc                                                                                       >  1:6872928/1‑94 (MQ=255)
     gcgAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAACATCGCCGATGAACTGGAAGCGCAAAGCg                                                                                      >  2:6533566/1‑94 (MQ=255)
     gcgAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCg                                                                                      >  2:4398652/1‑94 (MQ=255)
       gAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGACCTGGAAGAGCAAAGCGaa                                                                                    >  1:4732712/1‑94 (MQ=255)
        aagcaagcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGaaa                                                                                   <  2:8753832/94‑1 (MQ=255)
          gcaagcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAatc                                                                                 <  2:897049/94‑1 (MQ=255)
           caagcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAatca                                                                                >  2:10190007/1‑94 (MQ=255)
           caagcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAatca                                                                                <  2:5457383/94‑1 (MQ=255)
            aagcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAatcat                                                                               <  2:2785791/94‑1 (MQ=255)
              gcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATcc                                                                             <  2:1815704/94‑1 (MQ=255)
              gcCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATcc                                                                             <  1:8216796/94‑1 (MQ=255)
               ccTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCt                                                                            <  1:2513083/94‑1 (MQ=255)
                cTCGTATAAATTAGCGCAGCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTc                                                                           <  2:9816761/94‑1 (MQ=255)
                 tCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCa                                                                          >  2:5142734/1‑94 (MQ=255)
                 tCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCa                                                                          <  1:9212864/94‑1 (MQ=255)
                  cGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCaa                                                                         >  2:2526727/1‑94 (MQ=255)
                   gTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCACATCGAAATCATCCTCAAc                                                                        >  2:9396835/1‑94 (MQ=255)
                   gTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAc                                                                        <  1:5226719/94‑1 (MQ=255)
                   gTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAc                                                                        <  1:9292668/94‑1 (MQ=255)
                   ctataAAGTAGCCCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAc                                                                        <  1:6520326/93‑1 (MQ=255)
                    tataAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACg                                                                       >  2:2967617/1‑94 (MQ=255)
                      taAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCt                                                                     <  2:4812090/94‑1 (MQ=255)
                       aaaTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTa                                                                    <  2:3144375/94‑1 (MQ=255)
                       aaaTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTa                                                                    >  1:9988707/1‑94 (MQ=255)
                        aaTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTaa                                                                   <  2:5951487/94‑1 (MQ=255)
                         atgaGCGAAACTCGCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAc                                                                  <  1:4415072/91‑1 (MQ=255)
                         aTTAGCGCATCTCTCCAGCCGCGAAAAAAGTCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAAc                                                                  <  2:1553411/94‑1 (MQ=255)
                         aTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAc                                                                  <  2:6107559/94‑1 (MQ=255)
                         aTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAc                                                                  >  1:10132881/1‑94 (MQ=255)
                         aTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCCAAc                                                                  <  1:9832441/94‑1 (MQ=255)
                          ttAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACg                                                                 <  2:7862393/94‑1 (MQ=255)
                          ttAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACg                                                                 <  2:10538832/94‑1 (MQ=255)
                            aGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGAGAAATCATCCTCAACGCTAACGcc                                                               >  2:9155168/1‑94 (MQ=255)
                               gcAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAg                                                            >  2:1465256/1‑94 (MQ=255)
                               gcAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAg                                                            >  2:6724410/1‑94 (MQ=255)
                                cAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAgg                                                           >  2:8422381/1‑94 (MQ=255)
                                 aaCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGa                                                          >  1:2193485/1‑94 (MQ=255)
                                  aCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGAt                                                         <  1:9475087/94‑1 (MQ=255)
                                  aCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGAt                                                         <  2:6475550/94‑1 (MQ=255)
                                   ctctCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATg                                                        >  2:9497828/1‑94 (MQ=255)
                                    tctcCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGt                                                       >  1:1802039/1‑94 (MQ=255)
                                     ctcCAGCCGCGAAAAAAATAGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGACATCATGCTCAACGCTAACGCCCAGGATGtt                                                      >  2:5675062/1‑94 (MQ=255)
                                      tcCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTg                                                     >  2:1612625/1‑94 (MQ=255)
                                        cAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCt                                                   <  1:9626963/94‑1 (MQ=255)
                                        cAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCt                                                   <  2:1960403/94‑1 (MQ=255)
                                        cAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCt                                                   <  1:8691008/94‑1 (MQ=255)
                                           ccGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAc                                                >  1:7568346/1‑94 (MQ=255)
                                           ccGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAc                                                <  2:3831205/94‑1 (MQ=255)
                                           ccGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAc                                                <  2:7070732/94‑1 (MQ=255)
                                           ccGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAc                                                >  2:8123992/1‑94 (MQ=255)
                                           ccGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAc                                                <  1:8905143/94‑1 (MQ=255)
                                            cgcgAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcg                                               >  2:7625044/1‑94 (MQ=255)
                                            cgcgAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcg                                               <  1:9064702/94‑1 (MQ=255)
                                             gcgAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcgc                                              >  1:6997947/1‑94 (MQ=255)
                                             gcgAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcgc                                              >  2:3939437/1‑94 (MQ=255)
                                             gcaaaaaaaaTCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcgc                                              <  2:4081213/91‑1 (MQ=255)
                                              cgAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcgcg                                             <  1:3767163/94‑1 (MQ=255)
                                               gAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAcgcgc                                            <  2:10418785/94‑1 (MQ=255)
                                                   aaaaTCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGc                                        <  1:2950644/94‑1 (MQ=255)
                                                     aaTCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCa                                      <  1:6186186/94‑1 (MQ=255)
                                                          cgTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGc                                 >  1:10029050/1‑94 (MQ=255)
                                                           gTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGcc                                <  1:7287462/94‑1 (MQ=255)
                                                           gTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGcc                                >  2:4632919/1‑94 (MQ=255)
                                                            tGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCt                               >  2:7238639/1‑94 (MQ=255)
                                                              cTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTa                             >  1:5438747/1‑94 (MQ=255)
                                                               tgaaaaaaaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTag                            <  1:26866/91‑1 (MQ=255)
                                                                ggAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagc                           >  2:1294673/1‑94 (MQ=255)
                                                                gaaaaaaaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagc                           <  1:6318929/92‑1 (MQ=255)
                                                                 gAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcg                          <  1:5536274/94‑1 (MQ=255)
                                                                 gAAAAAAGCGCCGATGATCTGGAAGCGAAAAGAAAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcg                          <  2:1094677/94‑1 (MQ=255)
                                                                  aaaaaaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcga                         >  1:7124690/1‑94 (MQ=255)
                                                                  aaaaaaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcga                         >  2:2136392/1‑94 (MQ=255)
                                                                     aaaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcgaagc                      >  1:4542223/1‑94 (MQ=255)
                                                                      aaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGTTGACGCCCGAGCCAATGGCCTTagcgaagcg                     <  1:6057090/94‑1 (MQ=255)
                                                                      aaTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcgaagcg                     >  1:6558081/1‑94 (MQ=255)
                                                                       aTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTagcgaagcga                    >  2:3291913/1‑94 (MQ=255)
                                                                        tCGCTGATGAACTGGAAGCGCAAAGCGAAATCACCCTCAACGCTACCGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGAt                   <  2:2328933/94‑1 (MQ=255)
                                                                         cGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCACCGCTACCCCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATg                  <  1:4943674/94‑1 (MQ=255)
                                                                         cGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAACCAATGGCCTTAGCGAAGCGATg                  >  1:5840731/1‑94 (MQ=255)
                                                                           ccGATGAACTGGAAGCGCAAAGAGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCt                >  1:10432209/1‑94 (MQ=255)
                                                                            cGATGAGCTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCGGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCtt               <  2:582985/94‑1 (MQ=255)
                                                                            cGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCtt               >  1:3674929/1‑94 (MQ=255)
                                                                             gATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTg              >  1:1585348/1‑94 (MQ=255)
                                                                              aTGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATCGCCTTAGCGAAGCGATGCTTgc             >  1:4288845/1‑93 (MQ=255)
                                                                               tGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGAc            <  2:2753407/94‑1 (MQ=255)
                                                                                gAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGAcc           <  1:3062462/94‑1 (MQ=255)
                                                                                    tGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCt       <  2:4495919/94‑1 (MQ=255)
                                                                                    tGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCt       >  1:9427375/1‑94 (MQ=255)
                                                                                    tGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCATTAGCGAAGCGATGTTTGACCGTCt       >  2:8313584/1‑94 (MQ=255)
                                                                                     ggAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTg      <  1:1275734/94‑1 (MQ=255)
                                                                                      gAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTgg     <  1:1129232/94‑1 (MQ=255)
                                                                                       aaGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGc    <  2:1033008/94‑1 (MQ=255)
                                                                                        aGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCa   >  1:7808122/1‑94 (MQ=255)
                                                                                           |                                                                                           
TTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCAC  >  NC_000913/260746‑260928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 229 total aligned reads displayed.
CATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTG  >  NC_000913/260744‑260930
                                                                                             |                                                                                             
CATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCG                                                                                               >  SRR4302545.6093313/1‑94 (MQ=60)
CATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCG                                                                                               >  SRR4302545.8655753/1‑94 (MQ=60)
CATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCG                                                                                               <  SRR4302545.1041528/94‑1 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCCACTCTCCAGCCGCGAACAAAATCGCGTGCTGGAAAAAATCTCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.138862/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAGAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.5984720/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.944074/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              <  SRR4302545.9411171/94‑1 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.1065338/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.10426284/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.4006942/1‑94 (MQ=60)
 ATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGC                                                                                              >  SRR4302545.636638/1‑94 (MQ=60)
   TGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAA                                                                                            <  SRR4302545.5592536/94‑1 (MQ=60)
   TGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAA                                                                                            <  SRR4302545.4150246/94‑1 (MQ=60)
    GCCGCGAAGCAAGCCTCGTATAACTTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAA                                                                                           >  SRR4302545.6908910/1‑94 (MQ=60)
     CCGCGAAGCAAGCTTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAG                                                                                          <  SRR4302545.7626855/94‑1 (MQ=60)
     CCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAG                                                                                          <  SRR4302545.3485062/94‑1 (MQ=60)
     CCGCCAAGCAAGCCTCGTATAAATTAGCGCACACCGCCAGCCGCAAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAG                                                                                          <  SRR4302545.3485063/94‑1 (MQ=60)
      CGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGC                                                                                         >  SRR4302545.7061809/1‑94 (MQ=60)
      CGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGC                                                                                         >  SRR4302545.7061499/1‑94 (MQ=60)
      CGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGC                                                                                         <  SRR4302545.2711146/94‑1 (MQ=60)
       GCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCA                                                                                        >  SRR4302545.3083696/1‑94 (MQ=60)
        CGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATTGCCGATGAACTGGAAGCGCAAAGCGA                                                                                       >  SRR4302545.108961/1‑94 (MQ=60)
        CGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGA                                                                                       >  SRR4302545.7190199/1‑94 (MQ=60)
         GAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGACCTGGAAGAGCAAAGCGAA                                                                                      >  SRR4302545.4853431/1‑94 (MQ=60)
         GAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAA                                                                                      >  SRR4302545.7237924/1‑94 (MQ=60)
         GAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAA                                                                                      >  SRR4302545.8458108/1‑94 (MQ=60)
          AAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAA                                                                                     <  SRR4302545.3792276/94‑1 (MQ=60)
            GCAAGCCTCGTATAAATTAGCGCACCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATC                                                                                   <  SRR4302545.4431010/94‑1 (MQ=60)
             CAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCA                                                                                  <  SRR4302545.5480704/94‑1 (MQ=60)
              AAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCAT                                                                                 <  SRR4302545.5258717/94‑1 (MQ=60)
              AAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCAT                                                                                 <  SRR4302545.4581330/94‑1 (MQ=60)
              AAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCAT                                                                                 >  SRR4302545.6570717/1‑94 (MQ=60)
              AAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCAT                                                                                 <  SRR4302545.2924700/94‑1 (MQ=60)
               AGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATC                                                                                >  SRR4302545.8235723/1‑94 (MQ=60)
               AGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATC                                                                                <  SRR4302545.7442786/94‑1 (MQ=60)
               AGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATC                                                                                >  SRR4302545.10391748/1‑94 (MQ=60)
               AGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATC                                                                                >  SRR4302545.1067735/1‑94 (MQ=60)
                GCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCC                                                                               >  SRR4302545.7982082/1‑94 (MQ=60)
                GCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCC                                                                               <  SRR4302545.8454677/94‑1 (MQ=60)
                GCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCC                                                                               >  SRR4302545.10590914/1‑94 (MQ=60)
                 CCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCT                                                                              <  SRR4302545.2573833/94‑1 (MQ=60)
                  CTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTC                                                                             >  SRR4302545.7199624/1‑94 (MQ=60)
                   TCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCA                                                                            <  SRR4302545.9736300/94‑1 (MQ=60)
                   TCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCA                                                                            <  SRR4302545.9482931/94‑1 (MQ=60)
                    CGTATAAATTAGCGCACCTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAA                                                                           <  SRR4302545.7859085/94‑1 (MQ=60)
                    CGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAA                                                                           >  SRR4302545.4405799/1‑94 (MQ=60)
                     GTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAC                                                                          <  SRR4302545.5361453/94‑1 (MQ=60)
                     GTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAC                                                                          <  SRR4302545.9565111/94‑1 (MQ=60)
                     GTATAAATGAGCGCACCTCCCCAGCCGAGAAAAAAGTCGCGTGCTGGAAAAAATCGCCGATTAACGGGAAGCGCAAAGCGAAATCATCCTCAAC                                                                          <  SRR4302545.3063589/94‑1 (MQ=60)
                     CTATAAAGTAGCCCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAAC                                                                          <  SRR4302545.6698706/94‑1 (MQ=60)
                      TATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCcacc                                                                         >  SRR4302545.10571920/1‑90 (MQ=60)
                      TATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACG                                                                         <  SRR4302545.1211431/94‑1 (MQ=60)
                      TATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACG                                                                         <  SRR4302545.1211430/94‑1 (MQ=60)
                      TATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACG                                                                         >  SRR4302545.3645105/1‑94 (MQ=60)
                      TATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACG                                                                         >  SRR4302545.10571919/1‑94 (MQ=60)
                       ATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGC                                                                        >  SRR4302545.4458780/1‑94 (MQ=60)
                       ATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGC                                                                        >  SRR4302545.9468168/1‑94 (MQ=60)
                       ATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGC                                                                        >  SRR4302545.9518905/1‑94 (MQ=60)
                         AAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTA                                                                      <  SRR4302545.6452867/94‑1 (MQ=60)
                         AAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTA                                                                      <  SRR4302545.5412233/94‑1 (MQ=60)
                         AAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTA                                                                      <  SRR4302545.680139/94‑1 (MQ=60)
                          AATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAA                                                                     >  SRR4302545.4558561/1‑94 (MQ=60)
                           ATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAC                                                                    >  SRR4302545.4780134/1‑94 (MQ=60)
                           ATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAC                                                                    >  SRR4302545.2667861/1‑94 (MQ=60)
                           ATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCCAAC                                                                    <  SRR4302545.10124583/94‑1 (MQ=60)
                           ATGAGCGAAACTCGCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAAC                                                                    <  SRR4302545.4527260/94‑1 (MQ=60)
                             TAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGC                                                                  >  SRR4302545.5241108/1‑94 (MQ=60)
                             TAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGC                                                                  <  SRR4302545.6413801/94‑1 (MQ=60)
                             TAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGC                                                                  <  SRR4302545.3223651/94‑1 (MQ=60)
                             TAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGC                                                                  >  SRR4302545.9673644/1‑94 (MQ=60)
                             TAGCGCAACTCTCCAGACGCGAAAAAAATCGCGTGCTGGTGAAAATCGCCGCTGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTCACGC                                                                  >  SRR4302545.5241110/1‑94 (MQ=60)
                              AGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCC                                                                 <  SRR4302545.6714702/94‑1 (MQ=60)
                               GCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCC                                                                <  SRR4302545.2615695/94‑1 (MQ=60)
                               GCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCC                                                                <  SRR4302545.4715143/94‑1 (MQ=60)
                                CGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCA                                                               >  SRR4302545.2772677/1‑94 (MQ=60)
                                CGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCA                                                               >  SRR4302545.4598930/1‑94 (MQ=60)
                                CGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCA                                                               >  SRR4302545.10049812/1‑94 (MQ=60)
                                  CAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGG                                                             <  SRR4302545.5598570/94‑1 (MQ=60)
                                   AACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGA                                                            >  SRR4302545.2247067/1‑94 (MQ=60)
                                   AACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGA                                                            >  SRR4302545.7165720/1‑94 (MQ=60)
                                   AACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGA                                                            >  SRR4302545.10403964/1‑94 (MQ=60)
                                   AACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGA                                                            >  SRR4302545.9279707/1‑94 (MQ=60)
                                    ACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGAT                                                           <  SRR4302545.9753831/94‑1 (MQ=60)
                                    ACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGAT                                                           <  SRR4302545.9753832/94‑1 (MQ=60)
                                      TCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGT                                                         >  SRR4302545.1845614/1‑94 (MQ=60)
                                       CTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTT                                                        >  SRR4302545.7326884/1‑94 (MQ=60)
                                       CTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTT                                                        >  SRR4302545.5418548/1‑94 (MQ=60)
                                       CTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTT                                                        >  SRR4302545.2566798/1‑94 (MQ=60)
                                        TCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTG                                                       <  SRR4302545.9328232/94‑1 (MQ=60)
                                         caagcccctagaaatATCGCGTGGTGGAAAAAATCGCGGATGAACTGGAAGCGCAAAGCGAAATCATCCTTAACGCTAACGCCCAGGATGTTGC                                                      <  SRR4302545.4875147/79‑1 (MQ=60)
                                         CCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGC                                                      >  SRR4302545.328125/1‑94 (MQ=60)
                                          CAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCT                                                     <  SRR4302545.9910723/94‑1 (MQ=60)
                                          CAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCT                                                     <  SRR4302545.6605315/94‑1 (MQ=60)
                                          CAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCT                                                     <  SRR4302545.8943099/94‑1 (MQ=60)
                                          CAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCT                                                     >  SRR4302545.6344867/1‑94 (MQ=60)
                                           AGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTG                                                    >  SRR4302545.3938339/1‑94 (MQ=60)
                                           AGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTG                                                    <  SRR4302545.3889020/94‑1 (MQ=60)
                                           AGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTG                                                    <  SRR4302545.3039312/94‑1 (MQ=60)
                                           AGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTG                                                    <  SRR4302545.5858562/94‑1 (MQ=60)
                                             CCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAC                                                  >  SRR4302545.6647884/1‑94 (MQ=60)
                                             CCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAC                                                  <  SRR4302545.9163995/94‑1 (MQ=60)
                                             CCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAC                                                  >  SRR4302545.7782245/1‑94 (MQ=60)
                                             CCGAGAAAAAAATCGCGTGCTGGCAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAC                                                  <  SRR4302545.6079512/94‑1 (MQ=60)
                                              CGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACG                                                 <  SRR4302545.9329504/94‑1 (MQ=60)
                                              CGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACC                                                 >  SRR4302545.7077080/1‑94 (MQ=60)
                                              CGCGAAAAAAATCGCGTGCTGGAAAAAAAAGAAGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACG                                                 <  SRR4302545.9633302/94‑1 (MQ=60)
                                               GCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGC                                                >  SRR4302545.7190994/1‑94 (MQ=60)
                                                CGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCGAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCG                                               >  SRR4302545.6482269/1‑94 (MQ=60)
                                                CGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCG                                               >  SRR4302545.7500808/1‑94 (MQ=60)
                                                CGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCG                                               >  SRR4302545.7500807/1‑94 (MQ=60)
                                                CGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCG                                               <  SRR4302545.3860146/94‑1 (MQ=60)
                                                CGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGAG                                               >  SRR4302545.10189580/1‑94 (MQ=60)
                                                 GAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGC                                              >  SRR4302545.10084097/1‑94 (MQ=60)
                                                 GAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCCCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCCC                                              >  SRR4302545.9443603/1‑94 (MQ=60)
                                                  AAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCG                                             >  SRR4302545.5927293/1‑94 (MQ=60)
                                                  AAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCG                                             >  SRR4302545.1699898/1‑94 (MQ=60)
                                                  AAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCG                                             >  SRR4302545.9793791/1‑94 (MQ=60)
                                                   AAAAAATCGTGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGA                                            >  SRR4302545.6729571/1‑94 (MQ=60)
                                                   AAAAAATCGTGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGA                                            >  SRR4302545.6729572/1‑94 (MQ=60)
                                                   AAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGA                                            >  SRR4302545.3840921/1‑94 (MQ=60)
                                                    AAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAG                                           <  SRR4302545.8666537/94‑1 (MQ=60)
                                                    AAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAG                                           >  SRR4302545.321643/1‑94 (MQ=60)
                                                    AAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAG                                           >  SRR4302545.7677340/1‑94 (MQ=60)
                                                     AAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGC                                          <  SRR4302545.3022454/94‑1 (MQ=60)
                                                       AATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCA                                        <  SRR4302545.6354545/94‑1 (MQ=60)
                                                       AATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCA                                        <  SRR4302545.6354540/94‑1 (MQ=60)
                                                        ATCGCGTGCTGGAAAAAATCGCGGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAGGCGCGAGCCAA                                       <  SRR4302545.1034154/94‑1 (MQ=60)
                                                        ATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAA                                       >  SRR4302545.1741107/1‑94 (MQ=60)
                                                          CGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGAGGCGCGAGCCAATG                                     >  SRR4302545.9015364/1‑94 (MQ=60)
                                                           GCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGG                                    >  SRR4302545.1511354/1‑94 (MQ=60)
                                                            TGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGC                                   >  SRR4302545.1268791/1‑94 (MQ=60)
                                                            CGTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGC                                   >  SRR4302545.10326209/1‑94 (MQ=60)
                                                             GTGTTGAAAAAAATCGCGGATGAACTGGAAGCGCAAAGAGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCC                                  <  SRR4302545.9597526/94‑1 (MQ=60)
                                                             GTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCC                                  >  SRR4302545.621288/1‑94 (MQ=60)
                                                             GTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCC                                  >  SRR4302545.7420396/1‑94 (MQ=60)
                                                             GTGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCC                                  <  SRR4302545.7491836/94‑1 (MQ=60)
                                                              TGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCT                                 <  SRR4302545.9833661/94‑1 (MQ=60)
                                                              TGCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCT                                 >  SRR4302545.1651592/1‑94 (MQ=60)
                                                               GCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTT                                >  SRR4302545.2895338/1‑94 (MQ=60)
                                                               GCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTT                                >  SRR4302545.6754685/1‑94 (MQ=60)
                                                               GCTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTT                                >  SRR4302545.9513281/1‑94 (MQ=60)
                                                                CTGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTA                               >  SRR4302545.5581011/1‑94 (MQ=60)
                                                                 TGGAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAG                              <  SRR4302545.2374862/94‑1 (MQ=60)
                                                                 TGGAAAAAATCGCCAAGAAACTGGAAGCGAAAACCGAAACCATCCTCAACGCTAACCCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAG                              <  SRR4302545.8179962/94‑1 (MQ=60)
                                                                 TGAAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAG                              <  SRR4302545.27492/94‑1 (MQ=60)
                                                                   GAAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCG                            <  SRR4302545.5682446/94‑1 (MQ=60)
                                                                    AAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGA                           <  SRR4302545.7908653/94‑1 (MQ=60)
                                                                    AAAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGA                           >  SRR4302545.7322189/1‑94 (MQ=60)
                                                                     AAAAGTCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGCCGCGGGAGCCAATGGCCTTAGCGAA                          <  SRR4302545.6103712/94‑1 (MQ=60)
                                                                     AAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAA                          >  SRR4302545.10295164/1‑94 (MQ=60)
                                                                     AAAAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCACCCTGATCGCTAACCCCCAGGATGTTGCTGCCCCGGGAGCCAATGGCCTTAGCGAA                          <  SRR4302545.7177942/94‑1 (MQ=60)
                                                                      AAAATCGCCGATAAACTGAAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAG                         <  SRR4302545.1364836/94‑1 (MQ=60)
                                                                       aagcgtcgGATGAACGGGAAGCGAAAAGCGAAATCCTCCTAAACGCTATCGCCCAGAATTTTCCCGACGCGCGAGCCAATGGCCTTAGCGAAGC                        <  SRR4302545.6203332/86‑1 (MQ=28)
                                                                       AAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGC                        >  SRR4302545.4658675/1‑94 (MQ=60)
                                                                       AAATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGC                        >  SRR4302545.9132851/1‑94 (MQ=60)
                                                                        agtccCCGATAAACTGGAAGCGCAAAGCGACACCACCCCCAACGCTAACGCCGGGAATGTTGCTGACGCTCGAGCCAATGGCCTTAGCGAAGCG                       <  SRR4302545.6221377/89‑1 (MQ=33)
                                                                        AATTGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCG                       >  SRR4302545.4177082/1‑94 (MQ=60)
                                                                        AATCGCCGATGACCTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCG                       <  SRR4302545.9290102/94‑1 (MQ=60)
                                                                        AATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTCGCGAAGCG                       >  SRR4302545.207059/1‑94 (MQ=60)
                                                                        AATCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCG                       >  SRR4302545.9501627/1‑94 (MQ=60)
                                                                          TCGCCGATGAACTGGAAGGCCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGAT                     <  SRR4302545.8493498/94‑1 (MQ=60)
                                                                          GCGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGAT                     <  SRR4302545.10109416/94‑1 (MQ=60)
                                                                           CGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCACCGCTACCCCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATG                    <  SRR4302545.5068986/94‑1 (MQ=60)
                                                                           CGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATG                    >  SRR4302545.4181984/1‑94 (MQ=60)
                                                                           CGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATG                    <  SRR4302545.10133980/94‑1 (MQ=60)
                                                                           CGCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAACCAATGGCCTTAGCGAAGCGATG                    >  SRR4302545.5997987/1‑94 (MQ=60)
                                                                           CGCCGATGAACTGGAAGCGAAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATG                    <  SRR4302545.2078236/94‑1 (MQ=60)
                                                                            cccaATGAACGGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATTTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGC                   <  SRR4302545.5001431/90‑1 (MQ=60)
                                                                            GCCGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGC                   >  SRR4302545.6126592/1‑94 (MQ=60)
                                                                             CCGATGAACTGGAAGCGCAAAGAGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCT                  >  SRR4302545.10739658/1‑94 (MQ=60)
                                                                              CGATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACCCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTT                 >  SRR4302545.3185623/1‑94 (MQ=60)
                                                                              CGATGAACTGGAAGCGCAAAGCGAAATAATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTT                 >  SRR4302545.2205729/1‑94 (MQ=60)
                                                                              CGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTT                 >  SRR4302545.3764824/1‑94 (MQ=60)
                                                                              CGAGGAACTGGAAGCGCAAAGCAAAATCATCCTCAACGCTAACGCCCAGGATTTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTT                 <  SRR4302545.2138266/94‑1 (MQ=60)
                                                                               GATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTG                >  SRR4302545.1622796/1‑94 (MQ=60)
                                                                               GATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTG                >  SRR4302545.7661865/1‑94 (MQ=60)
                                                                               GATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTG                >  SRR4302545.4679062/1‑94 (MQ=60)
                                                                                ATGAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTggcgagcggtggctggc               >  SRR4302545.818378/1‑77 (MQ=60)
                                                                                  GAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACC             <  SRR4302545.3137539/94‑1 (MQ=60)
                                                                                  GAACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACC             >  SRR4302545.432698/1‑94 (MQ=60)
                                                                                   AACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCG            >  SRR4302545.5797848/1‑94 (MQ=60)
                                                                                   AACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCAAGGATGTTGCTGACGCGCGAGCCCATGGCCTTAGCGAAGCGATGCTTGACCG            >  SRR4302545.5797849/1‑94 (MQ=60)
                                                                                    ACTGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGT           >  SRR4302545.7702590/1‑94 (MQ=60)
                                                                                      TGGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCT         >  SRR4302545.9704316/1‑94 (MQ=60)
                                                                                      TGGAAGCGCAAAGAGAAATCATCCTCAACGCGAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCT         <  SRR4302545.395334/94‑1 (MQ=60)
                                                                                       GGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTG        <  SRR4302545.9568239/94‑1 (MQ=60)
                                                                                       GGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTG        <  SRR4302545.1007669/94‑1 (MQ=60)
                                                                                       GGAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTG        <  SRR4302545.1304192/94‑1 (MQ=60)
                                                                                        GAAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGG       <  SRR4302545.1153929/94‑1 (MQ=60)
                                                                                         AAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGC      >  SRR4302545.3810476/1‑94 (MQ=60)
                                                                                         AAGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGC      >  SRR4302545.4913621/1‑94 (MQ=60)
                                                                                          AGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCA     >  SRR4302545.8029206/1‑94 (MQ=60)
                                                                                          AGCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCA     >  SRR4302545.8038220/1‑94 (MQ=60)
                                                                                           GCGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCAC    <  SRR4302545.10728644/94‑1 (MQ=60)
                                                                                           GCACAAAGCGAAATCATCCTCAACGCTAACCCCGAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCAC    <  SRR4302545.9904637/94‑1 (MQ=60)
                                                                                            CGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACT   >  SRR4302545.1309829/1‑94 (MQ=60)
                                                                                            CGCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACT   <  SRR4302545.5207750/94‑1 (MQ=60)
                                                                                            CGCAAAGCGAAACCACCATCAACGCTACCGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACT   <  SRR4302545.7255801/94‑1 (MQ=60)
                                                                                             GCAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTG  >  SRR4302545.4983883/1‑94 (MQ=60)
                                                                                             GCAAAGCGAAATCACCCTCAACGCTACCGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTG  <  SRR4302545.7698197/94‑1 (MQ=60)
                                                                                             |                                                                                             
CATTGCCGCGAAGCAAGCCTCGTATAAATTAGCGCAACTCTCCAGCCGCGAAAAAAATCGCGTGCTGGAAAAAATCGCCGATGAACTGGAAGCACAAAGCGAAATCATCCTCAACGCTAACGCCCAGGATGTTGCTGACGCGCGAGCCAATGGCCTTAGCGAAGCGATGCTTGACCGTCTGGCACTG  >  NC_000913/260744‑260930

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑