Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
282,839 |
G→A |
A139T (GCG→ACG) |
yagF → |
putative dehydratase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 282,839 | 0 | G | A | 99.6%
| 873.3
/ NA
| 243 | A139T (GCG→ACG) | yagF | putative dehydratase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (112/130); total (113/130) |
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 276 total aligned reads displayed.
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC > NC_000913/282748‑282931
|
gATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGAcacg < 1:10039909/94‑1 (MQ=255)
gATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGAcacg > 1:3474813/1‑94 (MQ=255)
gATCCCGGTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGAcacg < 1:5644419/94‑1 (MQ=255)
aTCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACacgg > 2:6807021/1‑94 (MQ=255)
aTCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACacgg > 2:10469672/1‑94 (MQ=255)
gTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATc > 2:2973315/1‑94 (MQ=255)
gTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATc < 2:7693409/94‑1 (MQ=255)
ttCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCg < 1:9748854/94‑1 (MQ=255)
ttCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCg < 1:10495900/94‑1 (MQ=255)
cgcgGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCgtg < 1:2756232/94‑1 (MQ=255)
gcgGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCgtgt > 1:9479878/1‑94 (MQ=255)
cgGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGtt < 1:8192788/94‑1 (MQ=255)
ggCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTTCCTGCCGTACCGCAACGACGCGGCGATCGTGttt > 1:5208772/1‑94 (MQ=255)
ggCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGttt < 2:4964672/94‑1 (MQ=255)
gCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTc < 1:2011897/94‑1 (MQ=255)
gCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTc > 1:3098663/1‑94 (MQ=255)
ccTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTcg > 2:8954855/1‑94 (MQ=255)
cTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTcgc > 2:1187537/1‑94 (MQ=255)
ttCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTcgcc < 1:3304043/94‑1 (MQ=255)
ttCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTcgcc > 2:3121219/1‑94 (MQ=255)
cGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTcgccgc > 2:9865287/1‑94 (MQ=255)
gTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCgccgcc > 2:3697434/1‑94 (MQ=255)
aGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGa > 2:9811619/1‑94 (MQ=255)
aGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGa < 2:301441/94‑1 (MQ=255)
gCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGAt > 1:7555709/1‑94 (MQ=255)
cGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATc > 1:3640086/1‑94 (MQ=255)
gATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATcc > 2:6417438/1‑94 (MQ=255)
gATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATcc < 2:8673199/94‑1 (MQ=255)
gATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATcc > 2:9542834/1‑94 (MQ=255)
gATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATcc < 1:10184194/94‑1 (MQ=255)
aTCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCg < 1:8869613/94‑1 (MQ=255)
aTCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCg > 2:3984070/1‑94 (MQ=255)
aTCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCg < 1:6738865/94‑1 (MQ=255)
ccGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCt > 2:5039484/1‑94 (MQ=255)
ccGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCt < 1:1777885/94‑1 (MQ=255)
ccGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCt > 2:4286582/1‑94 (MQ=255)
gTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTcc < 1:711100/94‑1 (MQ=255)
tGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTccc < 1:4044485/94‑1 (MQ=255)
tGCGACGGGCGCTCGCAGGGCACGCACGGGATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTccc > 1:9590622/1‑94 (MQ=255)
gCGACGGGCTCCCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCt < 2:7986647/94‑1 (MQ=255)
gCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCt > 2:6487513/1‑94 (MQ=255)
gCGACGGGCCCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCt < 2:1720460/94‑1 (MQ=255)
gACGGGCGCTCGCAGGGCCCGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGc > 1:6391332/1‑94 (MQ=255)
gACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGc > 2:7013929/1‑94 (MQ=255)
aCGGCCGCTGGCGGGGCTCGTACGTTTTGTGCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGcc < 1:6930200/94‑1 (MQ=255)
cGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCg < 1:1285871/94‑1 (MQ=255)
ggCGCTCGCAGGCCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAc < 1:4522176/94‑1 (MQ=255)
gcgcTCGCAGGCCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAcg < 1:9266658/94‑1 (MQ=255)
gcTCGCAGGGCACGCACGGTATGTTTGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAcgcg > 2:948729/1‑94 (MQ=255)
gcTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAcgcg < 2:1653052/94‑1 (MQ=255)
cTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGCTCGTGGTTCGCCGCCTGGCCCGCTCCCTGCCCAcgcgc > 1:827059/1‑93 (MQ=255)
cTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACgcgg > 2:9156046/1‑94 (MQ=255)
cAGGGCACGCACGGTATGTTCGATTGCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCggcggg > 2:131998/1‑94 (MQ=255)
cAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCggcggg > 1:6526453/1‑94 (MQ=255)
aGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCggcgggc > 2:1102766/1‑94 (MQ=255)
gggCACGCACGGTATTTTCTATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCggcgggcg < 1:3943180/94‑1 (MQ=255)
gggCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCggcgggcg > 1:9560120/1‑94 (MQ=255)
gcacgcacGGTTTTTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGt < 1:4950884/94‑1 (MQ=255)
acgcacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGa > 2:3228482/1‑94 (MQ=255)
acgcacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGGGa > 2:6096696/1‑94 (MQ=255)
cgcacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGAt > 2:756244/1‑94 (MQ=255)
cgcacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGAt < 2:10383685/94‑1 (MQ=255)
cgcacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGCGAt > 2:1012079/1‑94 (MQ=255)
ccacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATc < 1:4095317/93‑1 (MQ=255)
cacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGAttg > 2:1512188/1‑92 (MQ=255)
cacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCg < 1:192872/94‑1 (MQ=255)
cacgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCg < 2:1876785/94‑1 (MQ=255)
cacgGTATGTTCGATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTACCGACGCGGCGGGCGGTGATCg < 2:9685727/94‑1 (MQ=255)
acgGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATctg > 1:1161090/1‑92 (MQ=255)
ggTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCg > 2:3624572/1‑94 (MQ=255)
tATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTa < 1:3205319/94‑1 (MQ=255)
tGTTCGATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGc < 1:2422570/94‑1 (MQ=255)
gTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCg > 2:2064760/1‑94 (MQ=255)
ttCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGa > 1:5576543/1‑94 (MQ=255)
gATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGAccg > 1:7218210/1‑93 (MQ=255)
gATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCt > 2:6255621/1‑94 (MQ=255)
gATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCt < 1:7768068/94‑1 (MQ=255)
gATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGGAGCGACCt > 1:4251689/1‑94 (MQ=255)
gATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGGGATCGGCGTAGCGACCt > 1:8011021/1‑94 (MQ=255)
caTTCCCTGCCGTACCGCACCGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCt < 1:5507033/93‑1 (MQ=255)
aTTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTg > 2:5488320/1‑94 (MQ=255)
tCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCg > 2:4729141/1‑94 (MQ=255)
cccTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGa > 1:6144160/1‑94 (MQ=255)
ccTGCCGTCCCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGAt < 2:2154438/94‑1 (MQ=255)
ccTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGAt > 2:4827452/1‑94 (MQ=255)
cTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATa < 1:2660690/94‑1 (MQ=255)
cTGCCGTACCGCAACGACACGGCGATCGCGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGGTCGGCGTAGCGCCCTGCGATa > 1:7295730/1‑94 (MQ=255)
tGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATaa < 2:2892054/94‑1 (MQ=255)
tGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATaa < 1:8079052/94‑1 (MQ=255)
gCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATaaa < 1:2524146/94‑1 (MQ=255)
cGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAgg > 1:1382254/1‑94 (MQ=255)
cGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAgg > 2:3505255/1‑94 (MQ=255)
tACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAgggg > 1:2094582/1‑93 (MQ=255)
tACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGc > 2:1388016/1‑94 (MQ=255)
ccGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTg < 1:9892288/94‑1 (MQ=255)
cAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGccc > 2:242195/1‑94 (MQ=255)
accgacaCGGCGATCGTGTTTCGCCGCGTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCg < 1:5276427/92‑1 (MQ=255)
acgacaCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGc < 1:4645094/94‑1 (MQ=255)
cgacaCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGcc < 2:8196945/94‑1 (MQ=255)
gacaCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGccc > 1:9078356/1‑93 (MQ=255)
|
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC > NC_000913/282748‑282931
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC > NC_000913/282746‑282931
|
GGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACA < SRR4302545.9977807/94‑1 (MQ=60)
GGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACA > SRR4302545.4303716/1‑94 (MQ=60)
GGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACAC < SRR4302545.3265406/94‑1 (MQ=60)
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACG < SRR4302545.10175960/94‑1 (MQ=60)
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACG < SRR4302545.10337264/94‑1 (MQ=60)
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACG > SRR4302545.3371295/1‑94 (MQ=60)
GATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACG > SRR4302545.3559954/1‑94 (MQ=60)
GATCCCGGTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACG < SRR4302545.5794695/94‑1 (MQ=60)
ATCCCTGTCGCTGCCTTCGTCAGAGATCCGGGCGACGGGCGCTCGCAGGGCAGACTCGGTATTTTCTATTCCCTGCCGTACCGCAACGACACGG < SRR4302545.9286244/94‑1 (MQ=40)
ATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGG > SRR4302545.3329465/1‑94 (MQ=60)
ATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGG > SRR4302545.3873749/1‑94 (MQ=60)
CCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCG < SRR4302545.549602/94‑1 (MQ=60)
cctttctttgtCTTCGTCAGCGATCCGTGCGACGGGCGCTCTCTGGTCACGCACGGTATGTTCGATACTCTGCCGTTCCGCAACGACACGGCGC > SRR4302545.9672616/12‑94 (MQ=54)
GTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATC < SRR4302545.2614297/94‑1 (MQ=60)
GTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATC < SRR4302545.4668958/94‑1 (MQ=60)
TTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCG < SRR4302545.10805276/94‑1 (MQ=60)
TTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCG < SRR4302545.6321072/94‑1 (MQ=60)
TTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCG < SRR4302545.10038965/94‑1 (MQ=60)
TTCGCGGCCTTCGTCAGCGATCCGTGCAACGGGCGATCGCAGGGCACGCACGGTATGTTCGATCCCCTGCCGTACCGCAACGACACGGCGATCG < SRR4302545.10038966/94‑1 (MQ=60)
CGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTG < SRR4302545.5854278/94‑1 (MQ=60)
CGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTG < SRR4302545.2822729/94‑1 (MQ=60)
CGCGCCCTTCATCCGCGATCCGTGCGACGGGCCCTCGCAGGTCACCCGGGGTATGTTCGATTCCCTGCCGTGCCGCAACGACACGGCGATCGTG < SRR4302545.2416124/94‑1 (MQ=44)
cgGGCCTTCGTCAGCGATCCGTGCGCCGGCCGCTCGCAGGGCACGCACGGTATCTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGT < SRR4302545.4078401/92‑1 (MQ=60)
GCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGT > SRR4302545.9758793/1‑94 (MQ=60)
GCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGT > SRR4302545.420301/1‑94 (MQ=60)
CGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTT > SRR4302545.8314850/1‑94 (MQ=60)
CGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTT < SRR4302545.8429908/94‑1 (MQ=60)
CGGCCTTCGTAAGCGATCCGTGCGACTGCCGCTCGCAGGGCAAGCACGGTATGTTCGATTCCCTACCGGTCCGCAAGGACACGGCGATCGTGTT > SRR4302545.1384304/1‑94 (MQ=53)
GGCGTTGGTCAGAGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGTTCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTT < SRR4302545.10044400/94‑1 (MQ=60)
GGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTTCCTGCCGTACCGCAACGACGCGGCGATCGTGTTT > SRR4302545.5342946/1‑94 (MQ=60)
GGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTT < SRR4302545.9775164/94‑1 (MQ=60)
GGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTC > SRR4302545.6835529/1‑94 (MQ=60)
GCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTC < SRR4302545.2061602/94‑1 (MQ=60)
GCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTC > SRR4302545.3174981/1‑94 (MQ=60)
GCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTC < SRR4302545.465623/94‑1 (MQ=60)
CCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCG < SRR4302545.3718956/94‑1 (MQ=60)
CCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCG < SRR4302545.7328051/94‑1 (MQ=60)
CTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGC > SRR4302545.7239955/1‑94 (MQ=60)
TTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCC < SRR4302545.3384855/94‑1 (MQ=60)
TCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCG < SRR4302545.9846596/94‑1 (MQ=60)
CGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGC > SRR4302545.8439823/1‑94 (MQ=60)
CGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGC < SRR4302545.155630/94‑1 (MQ=60)
CGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGC > SRR4302545.123748/1‑94 (MQ=60)
CGTCAGCGATCCGTGCGACGGGCCCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGC < SRR4302545.5975418/94‑1 (MQ=60)
GTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCC < SRR4302545.7670006/94‑1 (MQ=60)
GTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCC < SRR4302545.188753/94‑1 (MQ=60)
GTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCC > SRR4302545.1268069/1‑94 (MQ=60)
GTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCC < SRR4302545.1904147/94‑1 (MQ=60)
TCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTTGCCGCCT > SRR4302545.6684084/1‑94 (MQ=60)
CAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTG > SRR4302545.4063730/1‑94 (MQ=60)
CAGCAATCCGGGCGACGGGCGCTGGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTG < SRR4302545.5707806/94‑1 (MQ=60)
GCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGAT > SRR4302545.7769286/1‑94 (MQ=60)
CGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTTGTTCGACGCCTGATC > SRR4302545.935646/1‑94 (MQ=60)
CGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATC > SRR4302545.3728960/1‑94 (MQ=60)
GATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCC < SRR4302545.10485157/94‑1 (MQ=60)
GATCCGGGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCC < SRR4302545.3206142/94‑1 (MQ=60)
ATCCGTGCGACGGGCGCTCGCCGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCG > SRR4302545.5794015/1‑94 (MQ=60)
ATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCG < SRR4302545.6923626/94‑1 (MQ=60)
ATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCG < SRR4302545.9127287/94‑1 (MQ=60)
CGGTGCGCCGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCT < SRR4302545.1996485/94‑1 (MQ=60)
CCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGTCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGCTCCGCT > SRR4302545.3191478/1‑94 (MQ=60)
CCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCT < SRR4302545.5169747/94‑1 (MQ=60)
CCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCT < SRR4302545.1820548/94‑1 (MQ=60)
CGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCACCGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTC > SRR4302545.5558004/1‑94 (MQ=60)
GTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCC < SRR4302545.727079/94‑1 (MQ=60)
TGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCC < SRR4302545.4145749/94‑1 (MQ=60)
TGCGACGGGCGCTCGCAGGGCACGCACGGGATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCC > SRR4302545.9873236/1‑94 (MQ=60)
CGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTG < SRR4302545.1343047/94‑1 (MQ=60)
CGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTG > SRR4302545.4359743/1‑94 (MQ=60)
CGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTG < SRR4302545.2570823/94‑1 (MQ=60)
CGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTG > SRR4302545.1058265/1‑94 (MQ=60)
GACGGGCGCTCGCAGGGCCCGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGC > SRR4302545.6566100/1‑94 (MQ=60)
GACGGGCGCTCGCAGGGCACGCACGGCATGTTCGATTCCCTGGCGTACCGCAACGACACGGCGATCGTGTTTTGCCGCCTGATCCGCTCACTGC > SRR4302545.6566099/1‑94 (MQ=60)
acggccgctggcggggctcgtacgttttgtgCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCC < SRR4302545.7121203/63‑1 (MQ=60)
CGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCG < SRR4302545.1314471/94‑1 (MQ=60)
CGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCG < SRR4302545.9501238/94‑1 (MQ=60)
CGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCG < SRR4302545.3987657/94‑1 (MQ=60)
GGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAC < SRR4302545.818134/94‑1 (MQ=60)
GGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAC < SRR4302545.206613/94‑1 (MQ=60)
GGCGCTCGCAGGCCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGAC < SRR4302545.4638008/94‑1 (MQ=60)
GCGCTCGCAGGCCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACG < SRR4302545.9538327/94‑1 (MQ=60)
CGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGC > SRR4302545.7040736/1‑94 (MQ=60)
GCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCG < SRR4302545.10563170/94‑1 (MQ=60)
CTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGCTCGTGGTTCGCCGCCTGGCCCGCTCCCTGCCCACGCGC > SRR4302545.845635/1‑94 (MQ=60)
CTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGG > SRR4302545.845636/1‑94 (MQ=60)
TCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGC > SRR4302545.292262/1‑94 (MQ=60)
CGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCG > SRR4302545.5406828/1‑94 (MQ=60)
CGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCG < SRR4302545.1540884/94‑1 (MQ=60)
GCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGG < SRR4302545.3581463/94‑1 (MQ=60)
CAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGG > SRR4302545.6704981/1‑94 (MQ=60)
AGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGG > SRR4302545.1098696/1‑94 (MQ=60)
AGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGG > SRR4302545.9555400/1‑94 (MQ=60)
GGGCACGCACGGTATTTTCTATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCG < SRR4302545.4041664/94‑1 (MQ=60)
GGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCG > SRR4302545.9841890/1‑94 (MQ=60)
GGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCG > SRR4302545.992477/1‑94 (MQ=60)
GCACGCACGGTTTTTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGT < SRR4302545.5076336/94‑1 (MQ=60)
GCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGG > SRR4302545.9234220/1‑94 (MQ=60)
CACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGGG > SRR4302545.7865688/1‑94 (MQ=60)
CGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGAT < SRR4302545.4775111/94‑1 (MQ=60)
tctCGGTATGTTCGATTCCCTGCCGAACCTAAACGACGCGGCAATCGTGTTTCGCTGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATC < SRR4302545.897592/91‑1 (MQ=60)
cacgggtgtttcCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATC < SRR4302545.4987915/82‑1 (MQ=60)
CCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATC < SRR4302545.4197856/94‑1 (MQ=60)
CACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCG < SRR4302545.10939621/94‑1 (MQ=60)
CACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCG < SRR4302545.196930/94‑1 (MQ=60)
CCGGTATCTTCCATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGG < SRR4302545.2528584/94‑1 (MQ=60)
ACGGTATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCTG > SRR4302545.1186683/1‑94 (MQ=60)
TATGTTCGCTTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGACGACGCGGCGGGCGGGGATCTGGGTA > SRR4302545.10358395/1‑94 (MQ=60)
TATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTA < SRR4302545.8258873/94‑1 (MQ=60)
TATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTA < SRR4302545.3283866/94‑1 (MQ=60)
TTGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAG < SRR4302545.831044/94‑1 (MQ=60)
ATGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAG > SRR4302545.10242240/1‑94 (MQ=60)
TGTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGC < SRR4302545.7447506/94‑1 (MQ=60)
TGTTCGATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGC < SRR4302545.2481265/94‑1 (MQ=60)
GTTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGTCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCG < SRR4302545.9766164/94‑1 (MQ=60)
TTCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGA > SRR4302545.5724202/1‑94 (MQ=60)
TCGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGCTCCGCTCCCTGCCGACGCGGCGGGCGGggttctgcctagggac > SRR4302545.2036383/1‑78 (MQ=60)
CGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACC < SRR4302545.7203136/94‑1 (MQ=60)
CGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACC < SRR4302545.7312930/94‑1 (MQ=60)
CGATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACC < SRR4302545.4337046/94‑1 (MQ=60)
CGATTCCCGGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACC < SRR4302545.9848457/94‑1 (MQ=60)
GATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCT < SRR4302545.7987937/94‑1 (MQ=60)
GATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCG > SRR4302545.7419486/1‑94 (MQ=60)
GATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGGAGCGACCT > SRR4302545.4358203/1‑94 (MQ=60)
GATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGGGATCGGCGTAGCGACCT > SRR4302545.8239067/1‑94 (MQ=60)
CATTCCCTGCCGTACCGCACCGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCT < SRR4302545.5652233/94‑1 (MQ=60)
ATTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTG < SRR4302545.7695752/94‑1 (MQ=60)
ATCCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTG < SRR4302545.4916499/94‑1 (MQ=60)
TTCCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGggaatggcggagtgaccgcg > SRR4302545.2094741/1‑74 (MQ=60)
CCCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGA > SRR4302545.6311264/1‑94 (MQ=60)
CCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGAT > SRR4302545.8444350/1‑94 (MQ=60)
CCTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGAT > SRR4302545.7027959/1‑94 (MQ=60)
CTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATA < SRR4302545.2175305/94‑1 (MQ=60)
CTGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATA < SRR4302545.2724798/94‑1 (MQ=60)
CTGCCGTACCGCAACGACACGGCGATCGCGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGGTCGGCGTAGCGCCCTGCGATA > SRR4302545.7500338/1‑94 (MQ=60)
TGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAA < SRR4302545.8154570/94‑1 (MQ=60)
TGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAA < SRR4302545.3123257/94‑1 (MQ=60)
TGCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAA < SRR4302545.8310956/94‑1 (MQ=60)
GCCGTACCGCAACGACCCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAA < SRR4302545.2762837/94‑1 (MQ=60)
GCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAA < SRR4302545.2585133/94‑1 (MQ=60)
GCCGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAA > SRR4302545.2669393/1‑94 (MQ=60)
CGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGG > SRR4302545.1413255/1‑94 (MQ=60)
CGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGG < SRR4302545.6369648/94‑1 (MQ=60)
CGTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGG > SRR4302545.2295504/1‑94 (MQ=60)
GTACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGG > SRR4302545.10355767/1‑94 (MQ=60)
TACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGG > SRR4302545.2146083/1‑94 (MQ=60)
TACCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGC > SRR4302545.5670928/1‑94 (MQ=60)
CCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTG < SRR4302545.10186191/94‑1 (MQ=60)
CCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTG < SRR4302545.9413179/94‑1 (MQ=60)
CCGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTG < SRR4302545.6631705/94‑1 (MQ=60)
CGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGC > SRR4302545.9724054/1‑94 (MQ=60)
CGCAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGC < SRR4302545.4402698/94‑1 (MQ=60)
CAACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGGCC > SRR4302545.35437/1‑94 (MQ=60)
ACCGACACGGCGATCGTGTTTCGCCGCGTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCG < SRR4302545.5412925/94‑1 (MQ=60)
AACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGGTGCCCG > SRR4302545.772592/1‑94 (MQ=60)
AACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCG < SRR4302545.9088716/94‑1 (MQ=60)
ACGACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGC < SRR4302545.4763764/94‑1 (MQ=60)
GACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCC > SRR4302545.9343850/1‑94 (MQ=60)
GACACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCA < SRR4302545.4192113/94‑1 (MQ=60)
CGCGGCTAGCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGAGAAAGGGCTGCCCGCCACC < SRR4302545.5369422/94‑1 (MQ=60)
CACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGCTAAAGGGCTGGCCGCCACC > SRR4302545.5461849/1‑94 (MQ=60)
CACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC > SRR4302545.10049955/1‑94 (MQ=60)
CACGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC < SRR4302545.3631112/94‑1 (MQ=60)
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GGGATCCCGTTCGCGGCCTTCGTCAGCGATCCGTGCGACGGGCGCTCGCAGGGCACGCACGGTATGTTCGATTCCCTGCCGTACCGCAACGACGCGGCGATCGTGTTTCGCCGCCTGATCCGCTCCCTGCCGACGCGGCGGGCGGTGATCGGCGTAGCGACCTGCGATAAAGGGCTGCCCGCCACC > NC_000913/282746‑282931
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
