Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	308,315	A→G	L81P (CTG→CCG)	yagX ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	308,315	0	A	G	100.0%	1184.9 / NA	341	L81P (CTG→CCG)	yagX	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (157/184); total (157/184)

Only 100 of 373 total aligned reads displayed.

CATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCAGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGA  >  NC_000913/308224‑308407

cATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTccggc                                                                                            >  1:6290698/1‑94 (MQ=255)

 ctCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCCCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTccggcc                                                                                           <  2:1346948/93‑1 (MQ=255)

 aTCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTccggcc                                                                                           >  1:7683393/1‑94 (MQ=255)

   cAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTccggccag                                                                                         <  1:1010254/94‑1 (MQ=255)

    aGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCCTCGTCCGGCCAGa                                                                                        >  1:1156137/1‑94 (MQ=255)

    aGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGa                                                                                        >  1:9226527/1‑94 (MQ=255)

     gctgctGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGAt                                                                                       <  2:6090437/94‑1 (MQ=255)

      ctgctgTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATa                                                                                      <  2:7170439/94‑1 (MQ=255)

      ctgctgTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATa                                                                                      <  1:737753/94‑1 (MQ=255)

       tgctgTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATaa                                                                                     <  1:5336630/94‑1 (MQ=255)

         ctgTCGAGTTTTTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGAGGCGTAGCTGTCCATCGTCCGGCCAGATaaaa                                                                                   <  1:1575807/94‑1 (MQ=255)

         ctgTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATaaaa                                                                                   >  1:9465335/1‑94 (MQ=255)

          tgTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCGCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAg                                                                                  <  1:2939037/94‑1 (MQ=255)

           gTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAgc                                                                                 <  2:3406318/94‑1 (MQ=255)

            tCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAgcg                                                                                <  1:3674673/94‑1 (MQ=255)

             cGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCATCCGGCCAGATAAAAgcgc                                                                               >  2:7963042/1‑94 (MQ=255)

              gAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCt                                                                              <  2:8649457/94‑1 (MQ=255)

              gAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCt                                                                              <  1:8047105/94‑1 (MQ=255)

                gTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGc                                                                            <  2:8185834/94‑1 (MQ=255)

                 tttGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGcc                                                                           <  1:7871717/94‑1 (MQ=255)

                 tttGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGcc                                                                           >  2:4078695/1‑94 (MQ=255)

                  ttGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCg                                                                          <  2:4693677/94‑1 (MQ=255)

                    gTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAt                                                                        <  2:7737916/94‑1 (MQ=255)

                    gTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAt                                                                        <  1:2609689/94‑1 (MQ=255)

                    gTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAt                                                                        <  2:5836511/94‑1 (MQ=255)

                    gTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAt                                                                        >  2:6204086/1‑94 (MQ=255)

                     ttCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAtt                                                                       <  1:10291337/94‑1 (MQ=255)

                         cTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCt                                                                   <  2:6800183/94‑1 (MQ=255)

                         cTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCt                                                                   <  1:6395881/94‑1 (MQ=255)

                         cTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCt                                                                   <  2:6522919/94‑1 (MQ=255)

                          tGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTg                                                                  <  2:8890419/94‑1 (MQ=255)

                           gACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGa                                                                 <  1:9690869/94‑1 (MQ=255)

                           gACACTGGCGTTATCTTCACTCTATTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGa                                                                 <  1:5907975/94‑1 (MQ=255)

                            gcacTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGAt                                                                <  2:7653669/93‑1 (MQ=255)

                            acacTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGAt                                                                <  2:9484431/94‑1 (MQ=255)

                             cacTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATc                                                               <  1:4356459/94‑1 (MQ=255)

                             cacTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATc                                                               <  1:3407269/94‑1 (MQ=255)

                             cacTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATc                                                               <  2:2416994/94‑1 (MQ=255)

                              acTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCg                                                              <  1:3912237/94‑1 (MQ=255)

                              acTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCg                                                              <  1:491513/94‑1 (MQ=255)

                               cTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGt                                                             <  1:8011416/94‑1 (MQ=255)

                               cTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGt                                                             >  1:9082042/1‑94 (MQ=255)

                                 ggCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTcc                                                           >  2:4249968/1‑94 (MQ=255)

                                  gCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCt                                                          >  1:1801726/1‑94 (MQ=255)

                                  gCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCt                                                          >  2:5434260/1‑94 (MQ=255)

                                   cGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTg                                                         >  1:10002601/1‑94 (MQ=255)

                                   cGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTg                                                         <  1:5570918/94‑1 (MQ=255)

                                   cGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTg                                                         <  1:576330/94‑1 (MQ=255)

                                    attttCTTCACCCTCTTCCAGCTGTAGTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTgg                                                        <  1:8335812/90‑1 (MQ=255)

                                     ttATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGc                                                       <  1:2680439/94‑1 (MQ=255)

                                       aTCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGa                                                     >  2:3078215/1‑94 (MQ=255)

                                       aTCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGa                                                     <  1:8777145/94‑1 (MQ=255)

                                        tCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGAc                                                    <  2:10419270/94‑1 (MQ=255)

                                         cTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGAcc                                                   <  1:1958733/94‑1 (MQ=255)

                                           tCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGActct                                                 <  1:3266063/94‑1 (MQ=255)

                                           tCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACACt                                                 <  2:6376658/94‑1 (MQ=255)

                                            cACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTg                                                <  2:2208691/94‑1 (MQ=255)

                                             aCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTgg                                               >  2:2012595/1‑94 (MQ=255)

                                              ctctctTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGc                                              <  2:4884568/94‑1 (MQ=255)

                                                ctctTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTa                                            <  1:7261737/94‑1 (MQ=255)

                                                ctctTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTa                                            >  2:1655783/1‑94 (MQ=255)

                                                ctctTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTa                                            >  1:10470388/1‑94 (MQ=255)

                                                   ttCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCg                                         >  2:6631289/1‑94 (MQ=255)

                                                    tCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGGTTCGCTGATCGTCCTGGCGACCCTGGCTACCgg                                        >  2:10171906/1‑94 (MQ=255)

                                                    tCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCgg                                        >  2:9566513/1‑94 (MQ=255)

                                                    tCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCgg                                        <  2:7080397/94‑1 (MQ=255)

                                                    tCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCgg                                        >  2:2474541/1‑94 (MQ=255)

                                                       aGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGCCCTGGCGAACCTGGCTCCCGGCga                                     >  1:8207520/1‑94 (MQ=255)

                                                        gCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCgag                                    >  2:1484301/1‑94 (MQ=255)

                                                        gCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCgag                                    <  2:55866/94‑1 (MQ=255)

                                                         cTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCgaga                                   >  2:4371560/1‑94 (MQ=255)

                                                           gTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATg                                 >  1:3802022/1‑94 (MQ=255)

                                                           gTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATg                                 >  2:7002623/1‑94 (MQ=255)

                                                               tttCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAata                             <  1:5524935/94‑1 (MQ=255)

                                                                  ccGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATag                          >  1:8380324/1‑94 (MQ=255)

                                                                  ccGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATag                          <  2:329027/94‑1 (MQ=255)

                                                                  ccGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATag                          >  1:615150/1‑94 (MQ=255)

                                                                  ccGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATag                          <  2:8439992/94‑1 (MQ=255)

                                                                  ccGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATag                          >  1:1322744/1‑94 (MQ=255)

                                                                   cGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATaga                         >  1:57089/1‑94 (MQ=255)

                                                                    ggATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGTTACCGGCGAGATGAATATagag                        >  2:9742680/1‑94 (MQ=255)

                                                                      aTGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCg                      >  1:4742450/1‑94 (MQ=255)

                                                                        gCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCggg                    <  2:8790982/94‑1 (MQ=255)

                                                                        gCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCggg                    >  1:3001576/1‑94 (MQ=255)

                                                                        gCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCggg                    <  2:2771726/94‑1 (MQ=255)

                                                                         cGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGa                   >  1:2450211/1‑94 (MQ=255)

                                                                            aGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGgcgc                >  1:2218283/1‑94 (MQ=255)

                                                                            aGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGc                <  1:5306518/94‑1 (MQ=255)

                                                                             gCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCt               <  2:3924203/94‑1 (MQ=255)

                                                                                gTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCAt            >  1:4132095/1‑94 (MQ=255)

                                                                                  ccATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGc          >  2:6904802/1‑94 (MQ=255)

                                                                                   cATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGcc         <  1:4536825/94‑1 (MQ=255)

                                                                                   cATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGcc         >  2:9317547/1‑94 (MQ=255)

                                                                                    aTCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGCCg        >  2:10568962/1‑94 (MQ=255)

                                                                                     tCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGt       <  2:7233544/94‑1 (MQ=255)

                                                                                     tCGCCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATAAATATAGAGCGGGACGCTCATGCCGt       <  2:381120/94‑1 (MQ=255)

                                                                                       gTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTcc     >  2:4437137/1‑94 (MQ=255)

                                                                                        tCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGCTGAATATAGAGCGGGGCGCCCACGCTGtgcc    >  2:2968253/1‑91 (MQ=255)

                                                                                        tCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGCCGTCCt    <  2:10264034/94‑1 (MQ=255)

                                                                                          cagccagATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGGCCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGa  <  1:6997820/94‑1 (MQ=255)

CATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCAGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGA  >  NC_000913/308224‑308407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 202 total aligned reads displayed.

GCCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCAGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  >  NC_000913/308222‑308408

GCCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCG                                                                                               <  SRR4302545.10005384/94‑1 (MQ=60)

GCCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCG                                                                                               <  SRR4302545.10005383/94‑1 (MQ=60)

GCCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCG                                                                                               <  SRR4302545.3157791/94‑1 (MQ=60)

 CCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGG                                                                                              >  SRR4302545.2232776/1‑94 (MQ=60)

 CCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGG                                                                                              >  SRR4302545.1599281/1‑94 (MQ=60)

 CCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGG                                                                                              >  SRR4302545.1599280/1‑94 (MQ=60)

 CCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGG                                                                                              >  SRR4302545.5628281/1‑94 (MQ=60)

 CCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGG                                                                                              <  SRR4302545.6026386/94‑1 (MQ=60)

  CATCAGGTGCTGTCGAGTTTGTTCGCTGACCCTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGC                                                                                             <  SRR4302545.1283694/94‑1 (MQ=60)

  CATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGC                                                                                             >  SRR4302545.178841/1‑94 (MQ=60)

  CATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGC                                                                                             >  SRR4302545.6462225/1‑94 (MQ=60)

   ATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCC                                                                                            >  SRR4302545.3556440/1‑94 (MQ=60)

   ATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCC                                                                                            >  SRR4302545.7900931/1‑94 (MQ=60)

    TCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCA                                                                                           >  SRR4302545.4688036/1‑94 (MQ=60)

     CAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAG                                                                                          <  SRR4302545.1032580/94‑1 (MQ=60)

     CAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAG                                                                                          <  SRR4302545.3376099/94‑1 (MQ=60)

     CAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAG                                                                                          >  SRR4302545.3349026/1‑94 (MQ=60)

     CAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCGCTTCCAGCTGTATTTTCCGGATGCGTAGCGGTCCATCGTCCGGCCAG                                                                                          >  SRR4302545.9695331/1‑94 (MQ=60)

     CAGCTGCTGTCGAGTTTGTGCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAG                                                                                          <  SRR4302545.2350227/94‑1 (MQ=60)

      AGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCCTCGTCCGGCCAGA                                                                                         >  SRR4302545.1181531/1‑94 (MQ=60)

      AGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGA                                                                                         >  SRR4302545.2121325/1‑94 (MQ=60)

      AGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGA                                                                                         >  SRR4302545.9497025/1‑94 (MQ=60)

        CTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATA                                                                                       <  SRR4302545.754338/94‑1 (MQ=60)

         TGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAA                                                                                      <  SRR4302545.5475180/94‑1 (MQ=60)

          GCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAA                                                                                     >  SRR4302545.1423640/1‑94 (MQ=60)

          GCTATCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAA                                                                                     >  SRR4302545.3688033/1‑94 (MQ=60)

           CTGTCGAGTTTTTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGAGGCGTAGCTGTCCATCGTCCGGCCAGATAAAA                                                                                    <  SRR4302545.1612988/94‑1 (MQ=60)

           CTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAA                                                                                    <  SRR4302545.1612989/94‑1 (MQ=60)

           CTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAA                                                                                    <  SRR4302545.1612990/94‑1 (MQ=60)

           CTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAA                                                                                    >  SRR4302545.9743664/1‑94 (MQ=60)

            TGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCGCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAG                                                                                   <  SRR4302545.3010532/94‑1 (MQ=60)

            TGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAG                                                                                   >  SRR4302545.986470/1‑94 (MQ=60)

            TGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAG                                                                                   <  SRR4302545.9718171/94‑1 (MQ=60)

            TGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAG                                                                                   <  SRR4302545.6694688/94‑1 (MQ=60)

             GTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGC                                                                                  <  SRR4302545.6957745/94‑1 (MQ=60)

             GTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGC                                                                                  <  SRR4302545.3733101/94‑1 (MQ=60)

              TCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCG                                                                                 <  SRR4302545.3764558/94‑1 (MQ=60)

                GAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCT                                                                               >  SRR4302545.93935/1‑94 (MQ=60)

                GAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCT                                                                               <  SRR4302545.5686410/94‑1 (MQ=60)

                GAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCT                                                                               <  SRR4302545.8276848/94‑1 (MQ=60)

                GAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTACCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCT                                                                               <  SRR4302545.8276849/94‑1 (MQ=60)

                 AGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTG                                                                              >  SRR4302545.4882223/1‑94 (MQ=60)

                   TTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCC                                                                            <  SRR4302545.8095048/94‑1 (MQ=60)

                   TTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCC                                                                            >  SRR4302545.2585465/1‑94 (MQ=60)

                   TTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCC                                                                            >  SRR4302545.1387110/1‑94 (MQ=60)

                   TTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGACAAAAGCGCTGCC                                                                            <  SRR4302545.6336641/94‑1 (MQ=60)

                    TTGTTCGCTGACACTGGCGTTATCTTCCCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCG                                                                           <  SRR4302545.4377960/94‑1 (MQ=60)

                    TTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCG                                                                           <  SRR4302545.10259386/94‑1 (MQ=60)

                     TGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGT                                                                          >  SRR4302545.548523/1‑94 (MQ=60)

                      GTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAT                                                                         >  SRR4302545.5470183/1‑94 (MQ=60)

                      GTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAT                                                                         <  SRR4302545.2672515/94‑1 (MQ=60)

                      GTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAT                                                                         <  SRR4302545.5706489/94‑1 (MQ=60)

                      GTTCGCTGACACTGGCGTTATCTCCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGAT                                                                         <  SRR4302545.3991321/94‑1 (MQ=60)

                       TTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATT                                                                        <  SRR4302545.10594828/94‑1 (MQ=60)

                       TTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATT                                                                        <  SRR4302545.10595045/94‑1 (MQ=60)

                        TCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTC                                                                       <  SRR4302545.5025781/94‑1 (MQ=60)

                         CGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCG                                                                      >  SRR4302545.9795945/1‑94 (MQ=60)

                          GCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGC                                                                     >  SRR4302545.3800926/1‑94 (MQ=60)

                          GCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGC                                                                     >  SRR4302545.2655665/1‑94 (MQ=60)

                           CTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCT                                                                    >  SRR4302545.10354546/1‑94 (MQ=60)

                           CTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCT                                                                    <  SRR4302545.6570765/94‑1 (MQ=60)

                            ctgccccgggctttatctcccccccttcccagctttttttcccggttgcttGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTG                                                                   <  SRR4302545.3221136/43‑1 (MQ=60)

                            TGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTG                                                                   <  SRR4302545.10783408/94‑1 (MQ=60)

                            TGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTG                                                                   <  SRR4302545.2691031/94‑1 (MQ=60)

                            AGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTG                                                                   >  SRR4302545.10690147/1‑94 (MQ=60)

                             GACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGA                                                                  <  SRR4302545.6067287/94‑1 (MQ=60)

                             GACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGA                                                                  <  SRR4302545.4964547/94‑1 (MQ=60)

                             GACACTGGCGTTATCTTCACTCTATTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGA                                                                  <  SRR4302545.6067285/94‑1 (MQ=60)

                              ACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGAT                                                                 <  SRR4302545.5903551/94‑1 (MQ=60)

                               CACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATC                                                                <  SRR4302545.3490379/94‑1 (MQ=60)

                               CACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATC                                                                <  SRR4302545.4466551/94‑1 (MQ=60)

                               CACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATC                                                                <  SRR4302545.8615266/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               >  SRR4302545.9730052/1‑94 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.10568322/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.502481/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.4009885/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.10568321/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.2081431/94‑1 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               >  SRR4302545.9383661/1‑94 (MQ=60)

                                ACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCG                                                               <  SRR4302545.10568323/94‑1 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              <  SRR4302545.543568/94‑1 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              <  SRR4302545.8239475/94‑1 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              <  SRR4302545.8239476/94‑1 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              >  SRR4302545.10350510/1‑94 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              <  SRR4302545.9227667/94‑1 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              >  SRR4302545.6656937/1‑94 (MQ=60)

                                 CTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGT                                                              >  SRR4302545.9347720/1‑94 (MQ=60)

                                  TGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTC                                                             >  SRR4302545.2064352/1‑94 (MQ=60)

                                   GGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCC                                                            <  SRR4302545.4855619/94‑1 (MQ=60)

                                    GCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCT                                                           >  SRR4302545.1373196/1‑94 (MQ=60)

                                    GCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCT                                                           <  SRR4302545.3766737/94‑1 (MQ=60)

                                    GCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCT                                                           >  SRR4302545.1845291/1‑94 (MQ=60)

                                    GCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGGCCGCCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCT                                                           <  SRR4302545.8766847/94‑1 (MQ=60)

                                     CGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTG                                                          <  SRR4302545.589325/94‑1 (MQ=60)

                                     CGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTG                                                          >  SRR4302545.10299152/1‑94 (MQ=60)

                                     CGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTG                                                          <  SRR4302545.5718387/94‑1 (MQ=60)

                                     CGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGACTCGCTGATCGTCCTG                                                          >  SRR4302545.5614788/1‑94 (MQ=60)

                                      atttTCTTCACCCTCTTCCAGCTGTAGTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGG                                                         <  SRR4302545.8577355/90‑1 (MQ=60)

                                      GTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGG                                                         <  SRR4302545.9115355/94‑1 (MQ=60)

                                       TTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGC                                                        <  SRR4302545.2745026/94‑1 (MQ=60)

                                       TTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGC                                                        >  SRR4302545.3303205/1‑94 (MQ=60)

                                        TATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCG                                                       >  SRR4302545.3034553/1‑94 (MQ=60)

                                        TATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCG                                                       >  SRR4302545.8272305/1‑94 (MQ=60)

                                         ATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGA                                                      <  SRR4302545.9031849/94‑1 (MQ=60)

                                           CTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACC                                                    <  SRR4302545.2007316/94‑1 (MQ=60)

                                            TTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCC                                                   >  SRR4302545.8047419/1‑94 (MQ=60)

                                             TCGCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.6055305/94‑1 (MQ=60)

                                             TCCCTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.8126696/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACTCT                                                  <  SRR4302545.3346148/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.7481119/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.8126697/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.5238516/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  <  SRR4302545.3024269/94‑1 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCT                                                  >  SRR4302545.3902896/1‑94 (MQ=60)

                                             TCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCGGTCCATCGTCCGGCCAGATAAAAGCGCTGCAGATTCGCGGATCGTCCTTGCGACCCT                                                  <  SRR4302545.5238515/94‑1 (MQ=60)

                                              CACTCTCTTCCAGCTGTATTTTCCTGATGCGTAGCTGTCCAACGTCCGGCCAGATAAAAGCGCTGCCAATTCGCTGATCGTCCTGGCGTCCTTG                                                 <  SRR4302545.3894135/94‑1 (MQ=60)

                                               ACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGG                                                >  SRR4302545.8590171/1‑94 (MQ=60)

                                                CTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGC                                               >  SRR4302545.2958598/1‑94 (MQ=60)

                                                 TCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGGGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCT                                              >  SRR4302545.9243613/1‑94 (MQ=60)

                                                 TCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCT                                              >  SRR4302545.1908001/1‑94 (MQ=60)

                                                 TCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCACTGATCGTCCTGGCGACCCTGGCT                                              >  SRR4302545.6363709/1‑94 (MQ=60)

                                                  CTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTA                                             <  SRR4302545.7537495/94‑1 (MQ=60)

                                                  CTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTA                                             >  SRR4302545.9232039/1‑94 (MQ=60)

                                                  CTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTA                                             >  SRR4302545.10779085/1‑94 (MQ=60)

                                                  CTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTA                                             <  SRR4302545.7465262/94‑1 (MQ=60)

                                                   TCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTAC                                            >  SRR4302545.2701019/1‑94 (MQ=60)

                                                    CTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACC                                           >  SRR4302545.3023581/1‑94 (MQ=60)

                                                    CTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACC                                           >  SRR4302545.6046243/1‑94 (MQ=60)

                                                     TTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTCCCG                                          >  SRR4302545.7534382/1‑94 (MQ=60)

                                                     TTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCG                                          >  SRR4302545.5865193/1‑94 (MQ=60)

                                                      TCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGG                                         >  SRR4302545.7994931/1‑94 (MQ=60)

                                                       CCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTCGCTACCGGC                                        >  SRR4302545.5832100/1‑94 (MQ=60)

                                                        CAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCG                                       >  SRR4302545.2483068/1‑94 (MQ=60)

                                                         AGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGG                                      >  SRR4302545.8588026/1‑94 (MQ=60)

                                                         AGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGCCCTGGCGAACCTGGCTCCCGGCGA                                      >  SRR4302545.8445055/1‑94 (MQ=60)

                                                          GCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTGCTGGCGACCCTGGCTACCGGCGAG                                     >  SRR4302545.10205751/1‑94 (MQ=60)

                                                          GCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAG                                     <  SRR4302545.5599651/94‑1 (MQ=60)

                                                           CTGTATTTTCCGGATCAGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGA                                    <  SRR4302545.7231163/94‑1 (MQ=60)

                                                            TGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGAT                                   >  SRR4302545.10663909/1‑94 (MQ=60)

                                                            TGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGAT                                   >  SRR4302545.4611335/1‑94 (MQ=60)

                                                            TGTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGAT                                   <  SRR4302545.7373329/94‑1 (MQ=60)

                                                            TGTATTTTCCGGATGCGTAGCTGGCCATCGGCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGAT                                   <  SRR4302545.7373623/94‑1 (MQ=60)

                                                             GTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATG                                  >  SRR4302545.6557970/1‑94 (MQ=60)

                                                             GTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATG                                  >  SRR4302545.7958995/1‑94 (MQ=60)

                                                             GTATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATG                                  >  SRR4302545.3896355/1‑94 (MQ=60)

                                                              TATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGA                                 <  SRR4302545.2505147/94‑1 (MQ=60)

                                                               ATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCTACCCTGGCTACCGGCGAGATGAA                                >  SRR4302545.5987226/1‑94 (MQ=60)

                                                               ATTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAA                                >  SRR4302545.8482434/1‑94 (MQ=60)

                                                                TTTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATTAAT                               <  SRR4302545.8861737/94‑1 (MQ=60)

                                                                 TTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATA                              <  SRR4302545.8333281/94‑1 (MQ=60)

                                                                 TTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATA                              <  SRR4302545.8333280/94‑1 (MQ=60)

                                                                 TTTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATA                              <  SRR4302545.5670745/94‑1 (MQ=60)

                                                                  TTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATAT                             <  SRR4302545.8831720/94‑1 (MQ=60)

                                                                  TTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATAT                             >  SRR4302545.4036302/1‑94 (MQ=60)

                                                                  TTCCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATAT                             <  SRR4302545.5377776/94‑1 (MQ=60)

                                                                    CCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAG                           >  SRR4302545.8622943/1‑94 (MQ=60)

                                                                    CCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAG                           >  SRR4302545.1352146/1‑94 (MQ=60)

                                                                    CCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAG                           <  SRR4302545.1972747/94‑1 (MQ=60)

                                                                    CCGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAG                           >  SRR4302545.628975/1‑94 (MQ=60)

                                                                     CGGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGA                          >  SRR4302545.58352/1‑94 (MQ=60)

                                                                      GGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAG                         <  SRR4302545.6287069/94‑1 (MQ=60)

                                                                      GGATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAG                         >  SRR4302545.4570955/1‑94 (MQ=60)

                                                                       GATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGC                        <  SRR4302545.8266377/94‑1 (MQ=60)

                                                                        ATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCG                       <  SRR4302545.649803/94‑1 (MQ=60)

                                                                        ATGCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCG                       >  SRR4302545.4863499/1‑94 (MQ=60)

                                                                          GCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGG                     <  SRR4302545.6263528/94‑1 (MQ=60)

                                                                          GCGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGG                     >  SRR4302545.3074823/1‑94 (MQ=60)

                                                                           CGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGA                    >  SRR4302545.2509575/1‑94 (MQ=60)

                                                                           CGTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGA                    >  SRR4302545.7434796/1‑94 (MQ=60)

                                                                            GTAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGCCCCTGGCTACCGGCGAGATGAATATAGAGCGGGAC                   <  SRR4302545.3889754/94‑1 (MQ=60)

                                                                             TAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACG                  >  SRR4302545.4408788/1‑94 (MQ=60)

                                                                             TAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACG                  <  SRR4302545.5680211/94‑1 (MQ=60)

                                                                             TAGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACG                  <  SRR4302545.3485791/94‑1 (MQ=60)

                                                                              AGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGC                 >  SRR4302545.4404535/1‑94 (MQ=60)

                                                                              AGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGC                 >  SRR4302545.2272441/1‑94 (MQ=60)

                                                                              AGCTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGC                 <  SRR4302545.5444101/94‑1 (MQ=60)

                                                                                CTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTC               <  SRR4302545.10877968/94‑1 (MQ=60)

                                                                                CTGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTC               <  SRR4302545.7766539/94‑1 (MQ=60)

                                                                                 TGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCA              >  SRR4302545.3277624/1‑94 (MQ=60)

                                                                                 TGTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCA              >  SRR4302545.1306393/1‑94 (MQ=60)

                                                                                  TTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCAT             <  SRR4302545.7670449/94‑1 (MQ=60)

                                                                                  GTCCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCAT             >  SRR4302545.4235403/1‑94 (MQ=60)

                                                                                    CCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGC           <  SRR4302545.4087633/94‑1 (MQ=60)

                                                                                    CCATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGC           >  SRR4302545.4104539/1‑94 (MQ=60)

                                                                                     CATCGTCCTGCCAGATAAAAGCCCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAAGATAGAGCGGGGCGCTCATGCC          <  SRR4302545.4653103/94‑1 (MQ=60)

                                                                                     CATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGGCGCTCATGCC          <  SRR4302545.4653104/94‑1 (MQ=60)

                                                                                     CATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCC          <  SRR4302545.6379399/94‑1 (MQ=60)

                                                                                     CATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCC          <  SRR4302545.8552040/94‑1 (MQ=60)

                                                                                     CATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCC          >  SRR4302545.5809069/1‑94 (MQ=60)

                                                                                      ATCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCG         >  SRR4302545.2582806/1‑94 (MQ=60)

                                                                                       TCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGT        <  SRR4302545.8466266/94‑1 (MQ=60)

                                                                                       TCGTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGC        >  SRR4302545.9419600/1‑94 (MQ=60)

                                                                                         GTCCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCC      <  SRR4302545.2930327/94‑1 (MQ=60)

                                                                                           CCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTG    <  SRR4302545.8387491/94‑1 (MQ=60)

                                                                                           CCGGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTG    <  SRR4302545.5707740/94‑1 (MQ=60)

                                                                                            CAGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGGCCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGA   <  SRR4302545.7190865/94‑1 (MQ=60)

                                                                                             GGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  >  SRR4302545.800247/1‑94 (MQ=60)

                                                                                             GGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  <  SRR4302545.4259540/94‑1 (MQ=60)

                                                                                             GGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  >  SRR4302545.3562466/1‑94 (MQ=60)

                                                                                             GGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  <  SRR4302545.8025782/94‑1 (MQ=60)

GCCATCAGCTGCTGTCGAGTTTGTTCGCTGACACTGGCGTTATCTTCACTCTCTTCCAGCTGTATTTTCCGGATGCGTAGCTGTCCATCGTCCAGCCAGATAAAAGCGCTGCCGATTCGCTGATCGTCCTGGCGACCCTGGCTACCGGCGAGATGAATATAGAGCGGGACGCTCATGCCGTCCTGAA  >  NC_000913/308222‑308408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`