Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 647 270.1 21258240 98.4% 20918108 94.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 535,281 A→G E116E (GAA→GAG)  gip → glyoxylate‑induced protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913535,2810AG99.5% 1422.6 / ‑4.4 405E116E (GAA→GAG) gipglyoxylate‑induced protein
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base G (177/226);  total (178/227)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 411 total aligned reads displayed.

GCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAAC  >  NC_000913/535190‑535371
                                                                                           |                                                                                          
gCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCa                                                                                          <  2:1564759/94‑1 (MQ=255)
 cGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAg                                                                                         >  1:7838150/1‑94 (MQ=255)
   tAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGAt                                                                                       <  2:1414180/94‑1 (MQ=255)
    agcagcagcGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGAtt                                                                                      >  2:4753166/1‑94 (MQ=255)
      cagcagcGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCa                                                                                    >  1:4494758/1‑94 (MQ=255)
      cagcagcGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCa                                                                                    <  2:2180481/94‑1 (MQ=255)
       agcagcGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAc                                                                                   <  1:5325318/94‑1 (MQ=255)
         cagcGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGc                                                                                 <  2:9338252/94‑1 (MQ=255)
            cGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAGCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAAc                                                                              <  1:68139/94‑1 (MQ=255)
            cGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCCAc                                                                              >  1:994488/1‑94 (MQ=255)
            cGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAAc                                                                              <  2:6419517/94‑1 (MQ=255)
             gATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACg                                                                             <  1:2843089/94‑1 (MQ=255)
             gATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACg                                                                             <  2:5728467/94‑1 (MQ=255)
               ttCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCt                                                                           <  1:7216798/94‑1 (MQ=255)
                 cGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTg                                                                         <  2:1375882/94‑1 (MQ=255)
                  gTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGt                                                                        >  2:3060920/1‑94 (MQ=255)
                  gTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGCCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCGTga                                                                        >  1:8020246/1‑93 (MQ=255)
                     aTGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGa                                                                     <  2:5346922/94‑1 (MQ=255)
                      tGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGaa                                                                    <  1:93834/94‑1 (MQ=255)
                        cccGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGaaaa                                                                  >  1:10088178/1‑94 (MQ=255)
                         ccGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAAc                                                                 >  2:3606421/1‑94 (MQ=255)
                            tGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTg                                                              <  1:5982754/94‑1 (MQ=255)
                            tGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTg                                                              <  2:8341037/94‑1 (MQ=255)
                            tGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTg                                                              <  2:1740039/94‑1 (MQ=255)
                              cgcTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCg                                                            >  1:3301728/1‑94 (MQ=255)
                                cTGGGTAATAAAAAAATTAACGGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGtt                                                          <  1:2657988/94‑1 (MQ=255)
                                 tGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCCTGTAGAAAACCTGCGTTa                                                         <  1:576569/94‑1 (MQ=255)
                                  tggTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTAt                                                        <  2:3393338/93‑1 (MQ=255)
                                  ggataataaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTAt                                                        <  2:9678120/91‑1 (MQ=255)
                                    gTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGc                                                      <  1:9273217/94‑1 (MQ=255)
                                     taataaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGcc                                                     <  1:8567926/94‑1 (MQ=255)
                                     aattaaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGcc                                                     <  1:9837447/91‑1 (MQ=255)
                                      aataaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCcg                                                    <  2:4551323/94‑1 (MQ=255)
                                        taaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCcgcg                                                  <  1:7575351/94‑1 (MQ=255)
                                        taaAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCcgcg                                                  <  2:3171421/94‑1 (MQ=255)
                                         aaaaaaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGa                                                 >  2:2248821/1‑94 (MQ=255)
                                          aaaaaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAACACCTGCGTTATGCCGCGaa                                                <  2:8525996/94‑1 (MQ=255)
                                          aaaaaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGaa                                                >  2:10214879/1‑94 (MQ=255)
                                           aaaaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAat                                               <  2:6849618/94‑1 (MQ=255)
                                            aaaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAata                                              <  1:2994284/94‑1 (MQ=255)
                                             aaaTTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAatat                                             >  2:10337494/1‑94 (MQ=255)
                                                ttAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCt                                          >  2:5491933/1‑94 (MQ=255)
                                                 tAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtg                                         <  1:7369980/94‑1 (MQ=255)
                                                 tAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtg                                         <  2:769630/94‑1 (MQ=255)
                                                 tAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtg                                         <  1:706220/94‑1 (MQ=255)
                                                  aaCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtga                                        <  2:3026533/94‑1 (MQ=255)
                                                  aaCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtga                                        <  2:6044814/94‑1 (MQ=255)
                                                   aCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAGCGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgat                                       <  2:4440807/94‑1 (MQ=255)
                                                   aCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGTCGCGAGTATGCtgag                                       >  1:4248530/1‑93 (MQ=255)
                                                   aCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgat                                       <  2:9864016/94‑1 (MQ=255)
                                                   aCTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgat                                       <  1:10184603/94‑1 (MQ=255)
                                                   aCTGTCTGGTCGGTAAAACGCCGGCTGGTTGCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgat                                       <  1:4335380/94‑1 (MQ=255)
                                                    cTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgatg                                      <  2:3896768/94‑1 (MQ=255)
                                                    cTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgatg                                      <  1:8978607/94‑1 (MQ=255)
                                                    cTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgatg                                      <  1:8450921/94‑1 (MQ=255)
                                                    cTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgatg                                      <  1:8240783/94‑1 (MQ=255)
                                                     tGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCtgatga                                     >  2:10522050/1‑94 (MQ=255)
                                                     ggTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAGCCTGCGTTATGCCGCGAATATGCtgatga                                     <  1:5524951/93‑1 (MQ=255)
                                                       tCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGaaa                                   <  1:411311/94‑1 (MQ=255)
                                                        cTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaag                                  >  2:7358495/1‑94 (MQ=255)
                                                         tGGTCGGTAAATCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaaga                                 <  1:1140744/94‑1 (MQ=255)
                                                          ggTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaagaa                                <  2:7551016/94‑1 (MQ=255)
                                                          ggTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaagaa                                <  2:1097396/94‑1 (MQ=255)
                                                          ggTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaagaa                                >  2:4187115/1‑94 (MQ=255)
                                                           gTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAACCCTGCGTTATGCCGCGAATATGCTGATGAaagaag                               <  2:8050165/94‑1 (MQ=255)
                                                           gTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaagaag                               >  1:1456455/1‑94 (MQ=255)
                                                           gTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAaagaag                               <  1:1706038/94‑1 (MQ=255)
                                                            tCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAagaaga                              >  1:9755361/1‑94 (MQ=255)
                                                             cGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGat                             <  2:2760010/94‑1 (MQ=255)
                                                             cGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGat                             >  1:4314565/1‑94 (MQ=255)
                                                              ggTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGata                            >  2:2658263/1‑94 (MQ=255)
                                                               gTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGatat                           <  1:5074279/94‑1 (MQ=255)
                                                               gTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGatat                           >  2:3261755/1‑94 (MQ=255)
                                                               gTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGatat                           <  2:2469803/94‑1 (MQ=255)
                                                                tAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAtt                          >  2:4585829/1‑94 (MQ=255)
                                                                tAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAtt                          <  1:2342910/94‑1 (MQ=255)
                                                                 aaaaCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAttt                         <  2:8943185/94‑1 (MQ=255)
                                                                  aaaCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAtttt                        <  2:381251/94‑1 (MQ=255)
                                                                  aaaCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAtttt                        <  2:8638451/94‑1 (MQ=255)
                                                                    aCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTttat                      >  1:3873601/1‑94 (MQ=255)
                                                                      gCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTttatta                    >  1:3167346/1‑94 (MQ=255)
                                                                        cGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACt                  >  1:7713706/1‑94 (MQ=255)
                                                                         ggCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTg                 >  2:6725120/1‑94 (MQ=255)
                                                                          gCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGa                >  2:5849812/1‑94 (MQ=255)
                                                                           cTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGAt               <  2:7496371/94‑1 (MQ=255)
                                                                            tGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGAtt              <  1:6671934/94‑1 (MQ=255)
                                                                             ggTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTg             <  1:10268279/94‑1 (MQ=255)
                                                                             ggTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTg             <  2:6502564/94‑1 (MQ=255)
                                                                              gTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGa            <  1:2059656/94‑1 (MQ=255)
                                                                               tttCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGaa           <  1:6373441/94‑1 (MQ=255)
                                                                                ttCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAAc          <  2:5052357/94‑1 (MQ=255)
                                                                                ttCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAAc          >  2:3572356/1‑94 (MQ=255)
                                                                                 tCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAAcc         <  2:210159/94‑1 (MQ=255)
                                                                                 tCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGACTGAAcc         <  1:10522050/94‑1 (MQ=255)
                                                                                  cagcagTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCt        >  2:6361078/1‑94 (MQ=255)
                                                                                   agcagTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTa       >  1:3700289/1‑94 (MQ=255)
                                                                                    gcagTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTAt      <  1:3111718/94‑1 (MQ=255)
                                                                                     cagTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACATAtt     >  2:9088195/1‑94 (MQ=255)
                                                                                        tGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAAc  <  2:10089360/94‑1 (MQ=255)
                                                                                        tGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAAc  <  1:10387343/94‑1 (MQ=255)
                                                                                           |                                                                                          
GCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAAC  >  NC_000913/535190‑535371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACCAT  >  NC_000913/535188‑535374
                                                                                             |                                                                                             
TGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAG                                                                                               <  SRR4302545.10246440/94‑1 (MQ=60)
TGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAG                                                                                               <  SRR4302545.8475327/94‑1 (MQ=60)
   CGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAG                                                                                            >  SRR4302545.8060335/1‑94 (MQ=60)
   CGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAG                                                                                            >  SRR4302545.3988279/1‑94 (MQ=60)
   CGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAG                                                                                            >  SRR4302545.3334476/1‑94 (MQ=60)
   CGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGGTTCAGCAGTGAGCAG                                                                                            >  SRR4302545.8060334/1‑94 (MQ=60)
    GTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGA                                                                                           >  SRR4302545.3111010/1‑94 (MQ=60)
    GTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGA                                                                                           >  SRR4302545.8126403/1‑94 (MQ=60)
    GTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGA                                                                                           >  SRR4302545.3974633/1‑94 (MQ=60)
       GCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTC                                                                                        <  SRR4302545.5570438/94‑1 (MQ=60)
        CAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCA                                                                                       >  SRR4302545.4609633/1‑94 (MQ=60)
         AGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAC                                                                                      <  SRR4302545.4411798/94‑1 (MQ=60)
         AGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAC                                                                                      <  SRR4302545.9223351/94‑1 (MQ=60)
         AGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAC                                                                                      >  SRR4302545.1407997/1‑94 (MQ=60)
         AGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAC                                                                                      <  SRR4302545.5463524/94‑1 (MQ=60)
         AGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAC                                                                                      <  SRR4302545.583003/94‑1 (MQ=60)
          GCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACG                                                                                     <  SRR4302545.4310936/94‑1 (MQ=60)
          GCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACG                                                                                     >  SRR4302545.8119113/1‑94 (MQ=60)
            AGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCA                                                                                   <  SRR4302545.7970838/94‑1 (MQ=60)
            AGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGATTCAGCAGTGAGCAGATTCACtga                                                                                   >  SRR4302545.10818797/1‑91 (MQ=60)
             GCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAC                                                                                  >  SRR4302545.2311625/1‑94 (MQ=60)
              CGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAGCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAAC                                                                                 <  SRR4302545.69659/94‑1 (MQ=60)
              CGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCCAC                                                                                 >  SRR4302545.1016561/1‑94 (MQ=60)
              CGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAAC                                                                                 >  SRR4302545.4195691/1‑94 (MQ=60)
              CGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAAC                                                                                 <  SRR4302545.10660702/94‑1 (MQ=60)
              CGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCAAGCAAC                                                                                 >  SRR4302545.2103983/1‑94 (MQ=60)
               GATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACG                                                                                <  SRR4302545.8593813/94‑1 (MQ=60)
               GATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACG                                                                                <  SRR4302545.2911845/94‑1 (MQ=60)
               GATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACG                                                                                <  SRR4302545.8114507/94‑1 (MQ=60)
               GATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACG                                                                                >  SRR4302545.10241782/1‑94 (MQ=60)
                 TTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCT                                                                              <  SRR4302545.7418023/94‑1 (MQ=60)
                  TCGTTATGCCCGTGGGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTT                                                                             <  SRR4302545.9401418/94‑1 (MQ=60)
                   CGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTG                                                                            <  SRR4302545.8143062/94‑1 (MQ=60)
                    GTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGCCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCgtga                                                                           >  SRR4302545.8248634/1‑90 (MQ=60)
                     TTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTA                                                                          >  SRR4302545.10748728/1‑94 (MQ=60)
                     TTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTA                                                                          >  SRR4302545.9178394/1‑94 (MQ=60)
                      TATGCCCGTGCGCTGGGTAATAAATAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAG                                                                         >  SRR4302545.7709902/1‑94 (MQ=60)
                      TATCCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAG                                                                         <  SRR4302545.6293471/94‑1 (MQ=60)
                        TGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAA                                                                       <  SRR4302545.5422089/94‑1 (MQ=60)
                        TGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAA                                                                       <  SRR4302545.95998/94‑1 (MQ=60)
                         GCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAA                                                                      >  SRR4302545.858912/1‑94 (MQ=60)
                          CCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAA                                                                     >  SRR4302545.10386532/1‑94 (MQ=60)
                           CCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAAC                                                                    <  SRR4302545.4353907/94‑1 (MQ=60)
                           CCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAAC                                                                    >  SRR4302545.1921580/1‑94 (MQ=60)
                            CGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACC                                                                   >  SRR4302545.6971871/1‑94 (MQ=60)
                            CGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACC                                                                   >  SRR4302545.3776604/1‑94 (MQ=60)
                             GTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCT                                                                  <  SRR4302545.7467258/94‑1 (MQ=60)
                             GTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCT                                                                  <  SRR4302545.10175991/94‑1 (MQ=60)
                              TGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTG                                                                 >  SRR4302545.3329886/1‑94 (MQ=60)
                              TGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTG                                                                 <  SRR4302545.6144164/94‑1 (MQ=60)
                              TGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTG                                                                 <  SRR4302545.3244896/94‑1 (MQ=60)
                                CGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCG                                                               >  SRR4302545.10484525/1‑94 (MQ=60)
                                CGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCG                                                               >  SRR4302545.3382502/1‑94 (MQ=60)
                                CGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCG                                                               >  SRR4302545.7301836/1‑94 (MQ=60)
                                 GCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGT                                                              >  SRR4302545.10722168/1‑94 (MQ=60)
                                  CTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCGACGCTTGTAGAAAACCTGCGTT                                                             >  SRR4302545.7253785/1‑94 (MQ=60)
                                  CTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTT                                                             >  SRR4302545.1442560/1‑94 (MQ=60)
                                  CTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTT                                                             >  SRR4302545.3109239/1‑94 (MQ=60)
                                  CTGGGTAATAAAAAAATTAACGGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTT                                                             <  SRR4302545.2722020/94‑1 (MQ=60)
                                   TGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTA                                                            <  SRR4302545.8797535/94‑1 (MQ=60)
                                   TGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTA                                                            >  SRR4302545.953601/1‑94 (MQ=60)
                                   TGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCCTGTAGAAAACCTGCGTTA                                                            <  SRR4302545.589572/94‑1 (MQ=60)
                                    GGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTAT                                                           <  SRR4302545.5081958/94‑1 (MQ=60)
                                     GGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCATATTCACGCAACGCTTGTAGAAAACCTGCGTTATG                                                          <  SRR4302545.2971716/94‑1 (MQ=60)
                                      GTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGC                                                         >  SRR4302545.10222785/1‑94 (MQ=60)
                                      GTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGC                                                         <  SRR4302545.8358195/94‑1 (MQ=60)
                                      GTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGC                                                         <  SRR4302545.9545065/94‑1 (MQ=60)
                                      GTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGGTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGC                                                         >  SRR4302545.10222786/1‑94 (MQ=60)
                                       aatTAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCC                                                        <  SRR4302545.10129750/91‑1 (MQ=60)
                                       TAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCC                                                        >  SRR4302545.6986660/1‑94 (MQ=60)
                                       TAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCC                                                        >  SRR4302545.8734867/1‑94 (MQ=60)
                                       TAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCC                                                        <  SRR4302545.8815691/94‑1 (MQ=60)
                                        AATAAAAAAATTAACTGTCTTGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAGAACCTGCGTTATGCCG                                                       <  SRR4302545.9283645/94‑1 (MQ=60)
                                        AATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCG                                                       <  SRR4302545.7172818/94‑1 (MQ=60)
                                         ATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGC                                                      <  SRR4302545.3093509/94‑1 (MQ=60)
                                          TAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCG                                                     <  SRR4302545.7789458/94‑1 (MQ=60)
                                          TAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCG                                                     >  SRR4302545.3949835/1‑94 (MQ=60)
                                          TAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCG                                                     <  SRR4302545.1668108/94‑1 (MQ=60)
                                           AAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGA                                                    >  SRR4302545.3762352/1‑94 (MQ=60)
                                           AAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGA                                                    >  SRR4302545.3275881/1‑94 (MQ=60)
                                           AAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGA                                                    <  SRR4302545.7993493/94‑1 (MQ=60)
                                           AAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGA                                                    <  SRR4302545.4416528/94‑1 (MQ=60)
                                            AAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAA                                                   >  SRR4302545.8631419/1‑94 (MQ=60)
                                             AAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAAT                                                  >  SRR4302545.2496295/1‑94 (MQ=60)
                                             AAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAAT                                                  >  SRR4302545.2656238/1‑94 (MQ=60)
                                             AAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAAT                                                  >  SRR4302545.968469/1‑94 (MQ=60)
                                              AAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATA                                                 <  SRR4302545.3067300/94‑1 (MQ=60)
                                               AAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATAT                                                >  SRR4302545.1679571/1‑94 (MQ=60)
                                                AATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATG                                               <  SRR4302545.9797071/94‑1 (MQ=60)
                                                AATTAACTGTCTGGTCGATAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATG                                               <  SRR4302545.5754366/94‑1 (MQ=60)
                                                AATTAACTGTCGGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATG                                               <  SRR4302545.4566611/94‑1 (MQ=60)
                                                AATTAACTGTCAGGTCGGTAACACGCAGGCTGGTTGCAGCAGTGAGCAGATTCACGAAACGCTTGTAGAAATCCTGCGTTATGCCGCGAATATG                                               <  SRR4302545.7307178/94‑1 (MQ=60)
                                                 ATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGC                                              >  SRR4302545.4584385/1‑94 (MQ=60)
                                                 ATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGC                                              >  SRR4302545.7493080/1‑94 (MQ=60)
                                                 ATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGC                                              <  SRR4302545.7271887/94‑1 (MQ=60)
                                                 ATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGC                                              >  SRR4302545.7030730/1‑94 (MQ=60)
                                                   TAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTG                                            <  SRR4302545.7577588/94‑1 (MQ=60)
                                                   TAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTG                                            <  SRR4302545.7577587/94‑1 (MQ=60)
                                                   TAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTG                                            >  SRR4302545.7764158/1‑94 (MQ=60)
                                                   TAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTG                                            <  SRR4302545.722084/94‑1 (MQ=60)
                                                   TAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCAGCGAATATGCTG                                            >  SRR4302545.4273306/1‑94 (MQ=60)
                                                    AACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGA                                           <  SRR4302545.9007438/94‑1 (MQ=60)
                                                    AACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGA                                           >  SRR4302545.2043892/1‑94 (MQ=60)
                                                     ACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGTCGCGAGTATGCTGAG                                          >  SRR4302545.4354929/1‑94 (MQ=60)
                                                     ACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGTCGCGAATATGCTGAT                                          >  SRR4302545.4354931/1‑94 (MQ=60)
                                                     ACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGAT                                          <  SRR4302545.10485577/94‑1 (MQ=60)
                                                     ACTGTCTGGTCGGTAAAACGCCGGCTGGTTGCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGAT                                          <  SRR4302545.4444758/94‑1 (MQ=60)
                                                      CTGTCTGGTCGGTAACACGCCGGCAGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTACGTTATGCCGCGAATATGCTGATG                                         <  SRR4302545.9632827/94‑1 (MQ=60)
                                                      CTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATG                                         >  SRR4302545.293091/1‑94 (MQ=60)
                                                      CTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATG                                         <  SRR4302545.8479346/94‑1 (MQ=60)
                                                      CTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATG                                         <  SRR4302545.8695219/94‑1 (MQ=60)
                                                      CTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATG                                         <  SRR4302545.9239888/94‑1 (MQ=60)
                                                      CTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATG                                         <  SRR4302545.8302940/94‑1 (MQ=60)
                                                       TGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGA                                        >  SRR4302545.2773259/1‑94 (MQ=60)
                                                       TGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGA                                        >  SRR4302545.2773258/1‑94 (MQ=60)
                                                       GGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAGCCTGCGTTATGCCGCGAATATGCTGATGA                                        <  SRR4302545.5670761/94‑1 (MQ=60)
                                                        GTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAA                                       <  SRR4302545.4822627/94‑1 (MQ=60)
                                                         TCTGGTCGGTAACACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAACCCTGCGTTATGCCGCGAATATGCTGATGAAA                                      <  SRR4302545.6186356/94‑1 (MQ=60)
                                                         TCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAA                                      >  SRR4302545.9274346/1‑94 (MQ=60)
                                                         TCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAA                                      <  SRR4302545.420441/94‑1 (MQ=60)
                                                         TCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAA                                      <  SRR4302545.2168478/94‑1 (MQ=60)
                                                         TCTGGTCGGTAAAACGCCGGCTGGCTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAA                                      <  SRR4302545.7844972/94‑1 (MQ=60)
                                                         TATGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAA                                      <  SRR4302545.1226013/94‑1 (MQ=60)
                                                          CTGGTCGGTAAAACGCCGGCTGGCTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAG                                     <  SRR4302545.7803781/94‑1 (MQ=60)
                                                           TGGTCGGTAAATCGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGA                                    <  SRR4302545.1165732/94‑1 (MQ=60)
                                                           TGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGA                                    >  SRR4302545.10914141/1‑94 (MQ=60)
                                                           TGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGA                                    >  SRR4302545.10914140/1‑94 (MQ=60)
                                                           TGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGA                                    >  SRR4302545.10559924/1‑94 (MQ=60)
                                                           CGGTCTGTAAAACGCCGTCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGA                                    <  SRR4302545.1165731/94‑1 (MQ=60)
                                                            GGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAA                                   <  SRR4302545.10536129/94‑1 (MQ=60)
                                                             GTCGGTAAATTGCCGGCGGGGTGCAGCAGGGAGCAGATTCACGCAACGCTGGTAGAAAACCTGCGTTATGCCGCGAATATGCAGATGAAAGAAG                                  >  SRR4302545.8322126/1‑94 (MQ=57)
                                                             GTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAG                                  <  SRR4302545.1746632/94‑1 (MQ=60)
                                                             GTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAG                                  >  SRR4302545.1489753/1‑94 (MQ=60)
                                                             GTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAG                                  <  SRR4302545.2442417/94‑1 (MQ=60)
                                                             GTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAG                                  >  SRR4302545.6855626/1‑94 (MQ=60)
                                                             GTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAAAATGCTGATGAAAGAAG                                  <  SRR4302545.10222133/94‑1 (MQ=60)
                                                              TCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGCATATGCTGATGAAAGAAGA                                 >  SRR4302545.10443129/1‑94 (MQ=60)
                                                              TCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGA                                 >  SRR4302545.9629944/1‑94 (MQ=60)
                                                              TCGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGA                                 >  SRR4302545.10045607/1‑94 (MQ=60)
                                                               tgcTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCTCGAATATGCTGATGAAAGAAGAT                                >  SRR4302545.5973626/4‑94 (MQ=60)
                                                               CGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGAT                                >  SRR4302545.4423244/1‑94 (MQ=60)
                                                               CGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGAT                                >  SRR4302545.3503052/1‑94 (MQ=60)
                                                               CGGTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGAT                                >  SRR4302545.4423242/1‑94 (MQ=60)
                                                                 GTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAT                              <  SRR4302545.5203585/94‑1 (MQ=60)
                                                                 GTAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATAT                              <  SRR4302545.5524414/94‑1 (MQ=60)
                                                                  TAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATT                             <  SRR4302545.2399944/94‑1 (MQ=60)
                                                                  TAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATT                             >  SRR4302545.2903260/1‑94 (MQ=60)
                                                                  TAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATT                             >  SRR4302545.6210463/1‑94 (MQ=60)
                                                                  TAAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATT                             <  SRR4302545.4538028/94‑1 (MQ=60)
                                                                   AAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTT                            >  SRR4302545.6732372/1‑94 (MQ=60)
                                                                   AAAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTT                            <  SRR4302545.10407085/94‑1 (MQ=60)
                                                                    AAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTT                           >  SRR4302545.10077317/1‑94 (MQ=60)
                                                                    AAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTT                           <  SRR4302545.4432890/94‑1 (MQ=60)
                                                                    AAACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTT                           <  SRR4302545.5248002/94‑1 (MQ=60)
                                                                     AACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTA                          <  SRR4302545.10047850/94‑1 (MQ=60)
                                                                      ACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTAT                         >  SRR4302545.3970278/1‑94 (MQ=60)
                                                                      ACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTAT                         <  SRR4302545.2683414/94‑1 (MQ=60)
                                                                      ACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTAT                         <  SRR4302545.6045179/94‑1 (MQ=60)
                                                                      ACGCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTAT                         >  SRR4302545.7680837/1‑94 (MQ=60)
                                                                        GCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTA                       >  SRR4302545.10055419/1‑94 (MQ=60)
                                                                        GCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTA                       >  SRR4302545.1668452/1‑94 (MQ=60)
                                                                        GCCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTA                       >  SRR4302545.3245139/1‑94 (MQ=60)
                                                                         CCGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTAC                      <  SRR4302545.5555900/94‑1 (MQ=60)
                                                                          CGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACT                     >  SRR4302545.7932077/1‑94 (MQ=60)
                                                                          CGGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACT                     >  SRR4302545.3221411/1‑94 (MQ=60)
                                                                           GGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTG                    >  SRR4302545.6019435/1‑94 (MQ=60)
                                                                           GGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTG                    <  SRR4302545.10486901/94‑1 (MQ=60)
                                                                           GGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTG                    >  SRR4302545.873632/1‑94 (MQ=60)
                                                                           GGCTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTG                    >  SRR4302545.3897697/1‑94 (MQ=60)
                                                                             CTGGTTTCGGCGGTGAGCAGATTCACGCAACGCTTGTAGAACACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGAT                  <  SRR4302545.9697592/94‑1 (MQ=60)
                                                                             CTGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGAT                  >  SRR4302545.3195036/1‑94 (MQ=60)
                                                                              TGGTTTCAGCAGTGAGCATATTCACGCAACTCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTTCTGATT                 <  SRR4302545.10653257/94‑1 (MQ=60)
                                                                              TGGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATT                 <  SRR4302545.6854878/94‑1 (MQ=60)
                                                                               GGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTG                >  SRR4302545.3928548/1‑94 (MQ=60)
                                                                               GGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTG                <  SRR4302545.10571218/94‑1 (MQ=60)
                                                                               GGTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTG                <  SRR4302545.4890014/94‑1 (MQ=60)
                                                                                GTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGA               <  SRR4302545.2110389/94‑1 (MQ=60)
                                                                                GTTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGA               >  SRR4302545.5891166/1‑94 (MQ=60)
                                                                                 TTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAA              <  SRR4302545.6547646/94‑1 (MQ=60)
                                                                                 TTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAA              <  SRR4302545.6547645/94‑1 (MQ=60)
                                                                                 TTTCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAA              <  SRR4302545.441765/94‑1 (MQ=60)
                                                                                   TCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACC            <  SRR4302545.6598839/94‑1 (MQ=60)
                                                                                   TCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACC            <  SRR4302545.6598840/94‑1 (MQ=60)
                                                                                   TCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACC            >  SRR4302545.4344944/1‑94 (MQ=60)
                                                                                   TCAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGACTGAACC            <  SRR4302545.10832049/94‑1 (MQ=60)
                                                                                    CAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCT           >  SRR4302545.5263931/1‑94 (MQ=60)
                                                                                    CAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCT           >  SRR4302545.5677697/1‑94 (MQ=60)
                                                                                    CAGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCT           <  SRR4302545.1065184/94‑1 (MQ=60)
                                                                                     AGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTA          <  SRR4302545.7896587/94‑1 (MQ=60)
                                                                                     AGCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTA          >  SRR4302545.3790981/1‑94 (MQ=60)
                                                                                     AGCAGTGAGCAGACTCACGCAACGCTTGTAGAAAAACTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTA          >  SRR4302545.2570249/1‑94 (MQ=60)
                                                                                      GCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTAT         <  SRR4302545.3040458/94‑1 (MQ=60)
                                                                                      GCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTAT         <  SRR4302545.3188420/94‑1 (MQ=60)
                                                                                      GCAGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTCTATTACTGATTGAACCTAT         <  SRR4302545.10671514/94‑1 (MQ=60)
                                                                                        AGTGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTA       <  SRR4302545.2203823/94‑1 (MQ=60)
                                                                                          TGAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAAC     <  SRR4302545.10693564/94‑1 (MQ=60)
                                                                                           GAGCAGATTCACGCAACGCTTGTAGAAAGCCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTACCC    <  SRR4302545.1935955/94‑1 (MQ=60)
                                                                                           GAGCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACC    >  SRR4302545.722226/1‑94 (MQ=60)
                                                                                             GCAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACCAT  <  SRR4302545.87545/94‑1 (MQ=60)
                                                                                             |                                                                                             
TGGCGTAGCAGCAGCGATTCGTTATGCCCGTGCGCTGGGTAATAAAAAAATTAACTGTCTGGTCGGTAAAACGCCGGCTGGTTTCAGCAGTGAACAGATTCACGCAACGCTTGTAGAAAACCTGCGTTATGCCGCGAATATGCTGATGAAAGAAGATATTTTATTACTGATTGAACCTATTAACCAT  >  NC_000913/535188‑535374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑