Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	647	270.1	21258240	98.4%	20918108	94.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	575,662	A→G	T149T (ACT→ACC)	nmpC ←	outer membrane porin protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	575,662	0	A	G	96.7%	1291.3 / 18.8	397	T149T (ACT→ACC)	nmpC	outer membrane porin protein
Reads supporting (aligned to +/- strand): ref base A (6/7); new base G (192/192); total (198/199)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01

Only 100 of 407 total aligned reads displayed.

TGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGA  >  NC_000913/575571‑575752

tgttACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAAGACGTCGGTTTGAGTCCAATTGTCACCACCGAATTCTGGCAGGACGTCGGt                                                                                          <  2:3471226/94‑1 (MQ=255)

tgttACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGt                                                                                          >  1:5188917/1‑94 (MQ=255)

  ttACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTcc                                                                                        <  1:10031349/94‑1 (MQ=255)

    aCGATAGGTTGCAACACCAGTGGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCAc                                                                                      <  1:7113929/94‑1 (MQ=255)

     cGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACg                                                                                     <  1:9277405/94‑1 (MQ=255)

     cGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACg                                                                                     <  2:8977450/94‑1 (MQ=255)

       aTAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCa                                                                                   >  2:7672695/1‑94 (MQ=255)

       aTAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCa                                                                                   <  1:2518469/94‑1 (MQ=255)

        tAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAc                                                                                  >  1:7358441/1‑94 (MQ=255)

         aGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAcc                                                                                 >  1:865156/1‑94 (MQ=255)

         aGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAcc                                                                                 <  2:6658208/94‑1 (MQ=255)

         aGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAcc                                                                                 >  2:2109472/1‑94 (MQ=255)

          agTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCg                                                                                <  2:4499294/93‑1 (MQ=255)

           gTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGa                                                                               >  2:9193764/1‑94 (MQ=255)

           gTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGa                                                                               >  1:3228612/1‑94 (MQ=255)

           gTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGa                                                                               <  2:10222993/94‑1 (MQ=255)

            ttGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGAt                                                                              <  2:6193200/94‑1 (MQ=255)

            ttGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGAt                                                                              <  2:9293800/94‑1 (MQ=255)

                aaCACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCg                                                                          >  2:1605539/1‑94 (MQ=255)

                 acacCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGt                                                                         >  1:4473755/1‑94 (MQ=255)

                  cacCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTa                                                                        >  1:6289603/1‑94 (MQ=255)

                   acCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTAt                                                                       >  1:1911273/1‑94 (MQ=255)

                   acCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTAt                                                                       >  2:783/1‑94 (MQ=255)

                     cAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGc                                                                     >  2:9833312/1‑94 (MQ=255)

                       gTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTa                                                                   <  1:9790845/94‑1 (MQ=255)

                          gCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTacac                                                                >  2:4935601/1‑94 (MQ=255)

                          gCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTacac                                                                <  1:9667960/94‑1 (MQ=255)

                            aCGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCg                                                              >  1:1293405/1‑94 (MQ=255)

                             cGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGt                                                             <  1:7600393/94‑1 (MQ=255)

                              gTTGAGTCATGAACACGTCGGTTTGAGGCCAAGTGTAACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGtg                                                            >  2:5866300/1‑93 (MQ=38)

                               ttGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAg                                                           >  2:4238018/1‑94 (MQ=255)

                                tGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGt                                                          >  2:8416456/1‑94 (MQ=255)

                                tGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGt                                                          <  1:2173217/94‑1 (MQ=255)

                                 gAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGtt                                                         <  1:6193524/94‑1 (MQ=255)

                                 gAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGtt                                                         <  1:4091767/94‑1 (MQ=255)

                                  aGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTa                                                        <  2:9554626/94‑1 (MQ=255)

                                   gTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTAc                                                       >  2:1469615/1‑94 (MQ=255)

                                   gTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTAc                                                       <  1:7952780/94‑1 (MQ=255)

                                    tCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACg                                                      >  1:2333396/1‑94 (MQ=255)

                                    tCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACg                                                      >  2:3964534/1‑94 (MQ=255)

                                       tGAACACGTCGGTTTGAGTCCAAGTGTCGCCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGcc                                                   <  2:6569674/94‑1 (MQ=255)

                                       tGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTCGCAGGACGTCAGTCCACGCACCGATGTGGTATGCTACACCGGAGTTACGGcc                                                   >  1:5364376/1‑94 (MQ=255)

                                         aaCACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGt                                                 >  2:745366/1‑94 (MQ=255)

                                          acacGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTa                                                >  2:8189974/1‑94 (MQ=255)

                                           cacGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTaa                                               <  2:2763990/94‑1 (MQ=255)

                                            acGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAAt                                              >  1:9966065/1‑94 (MQ=255)

                                             cGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATc                                             <  1:4875415/94‑1 (MQ=255)

                                             agTCGGTTTGAGTCCAAGTTTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATc                                             <  1:6902268/93‑1 (MQ=255)

                                              gTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCg                                            >  1:4258709/1‑94 (MQ=255)

                                               tCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGa                                           >  2:5721443/1‑94 (MQ=255)

                                                cGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAt                                          <  1:10505770/94‑1 (MQ=255)

                                                 ggTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATg                                         >  1:5731914/1‑94 (MQ=255)

                                                 ggTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATg                                         >  2:9279167/1‑94 (MQ=255)

                                                 ggTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATg                                         >  1:6685006/1‑94 (MQ=255)

                                                 ggTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGCCGGTCCACGCCCCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATg                                         >  2:3742692/1‑94 (MQ=255)

                                                 cgTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATg                                         <  1:7690597/93‑1 (MQ=255)

                                                   tttGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGa                                       <  2:8801905/94‑1 (MQ=255)

                                                   tttGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGa                                       <  1:3132356/94‑1 (MQ=255)

                                                      gAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGcc                                    <  2:1352547/94‑1 (MQ=255)

                                                        gTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGt                                  >  1:386718/1‑94 (MQ=255)

                                                         tCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTa                                 <  1:9527149/94‑1 (MQ=255)

                                                          ccAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAg                                <  2:1265181/94‑1 (MQ=255)

                                                          ccAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAg                                <  2:3324534/94‑1 (MQ=255)

                                                          ccAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACAGCGGTAATCGATGTAGCCGTat                                >  2:10298792/1‑93 (MQ=38)

                                                           cAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGt                               <  2:4392868/94‑1 (MQ=255)

                                                           cAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGt                               >  2:5566114/1‑94 (MQ=255)

                                                             aGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGGCa                             >  1:4206616/1‑94 (MQ=255)

                                                                gtCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCg                          <  2:1898435/94‑1 (MQ=255)

                                                                gtCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCg                          <  1:337260/94‑1 (MQ=255)

                                                                  caccacCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGaa                        >  2:3122100/1‑94 (MQ=255)

                                                                  caccacCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGaa                        >  1:1690982/1‑94 (MQ=255)

                                                                   accaccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAt                       >  1:2933386/1‑94 (MQ=255)

                                                                    ccaccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAtt                      >  1:5069295/1‑94 (MQ=255)

                                                                    ccaccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAtt                      >  2:5364601/1‑94 (MQ=255)

                                                                    ccaccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAtt                      >  2:6141703/1‑94 (MQ=255)

                                                                     caccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAttt                     >  2:2590597/1‑94 (MQ=255)

                                                                     caccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAttt                     >  1:4814558/1‑94 (MQ=255)

                                                                     caccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAttt                     >  1:4692480/1‑94 (MQ=255)

                                                                      cccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTc                    <  1:4423154/93‑1 (MQ=255)

                                                                       ccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCa                   >  1:9488213/1‑94 (MQ=255)

                                                                       ccGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCa                   >  2:4140933/1‑94 (MQ=255)

                                                                         gAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAgg                 >  1:7045077/1‑94 (MQ=255)

                                                                          aaTTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGc                >  1:8451390/1‑94 (MQ=255)

                                                                          aaTTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGc                <  2:5671404/94‑1 (MQ=255)

                                                                          aaTTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGc                <  2:6303748/94‑1 (MQ=255)

                                                                           aTTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGcc               <  1:747659/94‑1 (MQ=255)

                                                                           aTTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGcc               <  1:5247138/94‑1 (MQ=255)

                                                                           aTTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGcc               <  2:10619138/94‑1 (MQ=255)

                                                                           aTTCTGGCAGGACGTCGGTCCACCCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGcc               >  2:8610808/1‑94 (MQ=255)

                                                                              cTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGc            >  1:9009161/1‑94 (MQ=255)

                                                                                  cAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAg        <  2:3523263/94‑1 (MQ=255)

                                                                                   aGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAgg       >  2:6001100/1‑94 (MQ=255)

                                                                                   aGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAgg       <  1:10379833/94‑1 (MQ=255)

                                                                                    ggACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGc      <  2:6505462/94‑1 (MQ=255)

                                                                                    ggACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGc      >  1:1160053/1‑94 (MQ=255)

                                                                                      aCGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCaa    <  2:7017021/94‑1 (MQ=255)

                                                                                       cGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAg   <  2:5134035/94‑1 (MQ=255)

                                                                                        gTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGGCAGCGAAGGCAAGa  >  1:1392855/1‑94 (MQ=255)

                                                                                        gTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGa  >  2:7298509/1‑94 (MQ=255)

                                                                                        gTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGa  >  2:7181032/1‑94 (MQ=255)

TGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGA  >  NC_000913/575571‑575752

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 215 total aligned reads displayed.

GTTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACGG  >  NC_000913/575569‑575755

GTTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCG                                                                                               >  SRR4302545.10931752/1‑94 (MQ=60)

GTTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCG                                                                                               <  SRR4302545.6845479/94‑1 (MQ=60)

GTTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCG                                                                                               <  SRR4302545.2293764/94‑1 (MQ=60)

 TTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGG                                                                                              >  SRR4302545.1832895/1‑94 (MQ=60)

  TGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGT                                                                                             >  SRR4302545.1700273/1‑94 (MQ=60)

  TGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGT                                                                                             >  SRR4302545.5322536/1‑94 (MQ=60)

    TTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCC                                                                                           <  SRR4302545.10328550/94‑1 (MQ=60)

    TTACGATACGTGTCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCC                                                                                           <  SRR4302545.2276822/94‑1 (MQ=60)

     TACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCA                                                                                          <  SRR4302545.4801302/94‑1 (MQ=60)

     TACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCA                                                                                          <  SRR4302545.3805104/94‑1 (MQ=60)

     TACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCA                                                                                          >  SRR4302545.4321709/1‑94 (MQ=60)

      ACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCAC                                                                                         <  SRR4302545.7311075/94‑1 (MQ=60)

      ACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCAC                                                                                         <  SRR4302545.4558948/94‑1 (MQ=60)

      ACGATAGGTTGCAACACCAGTGGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCAC                                                                                         <  SRR4302545.7311077/94‑1 (MQ=60)

       CGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACG                                                                                        <  SRR4302545.4942063/94‑1 (MQ=60)

       CGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACG                                                                                        >  SRR4302545.5732580/1‑94 (MQ=60)

       CGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACG                                                                                        >  SRR4302545.6246298/1‑94 (MQ=60)

        GATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGC                                                                                       >  SRR4302545.2491241/1‑94 (MQ=60)

        GATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGC                                                                                       >  SRR4302545.4213739/1‑94 (MQ=60)

        GATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGC                                                                                       >  SRR4302545.10784442/1‑94 (MQ=60)

        GATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGC                                                                                       >  SRR4302545.7579630/1‑94 (MQ=60)

        GATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGGCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGGCGTCAGTCCACGC                                                                                       >  SRR4302545.1201149/1‑94 (MQ=60)

         ATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCA                                                                                      <  SRR4302545.2579327/94‑1 (MQ=60)

         ATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCA                                                                                      >  SRR4302545.4894911/1‑94 (MQ=60)

         ATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCA                                                                                      >  SRR4302545.9043641/1‑94 (MQ=60)

          TAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAC                                                                                     >  SRR4302545.7565443/1‑94 (MQ=60)

          TAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCAC                                                                                     >  SRR4302545.7565442/1‑94 (MQ=60)

          TAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCAC                                                                                     >  SRR4302545.9582948/1‑94 (MQ=60)

           AGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACC                                                                                    >  SRR4302545.884559/1‑94 (MQ=60)

            GGTTGCAACACCAGTTGCACGTTGATTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTTTGGCAGGACGTAAGTTCACGCACCG                                                                                   >  SRR4302545.7524238/1‑94 (MQ=60)

             GTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGA                                                                                  >  SRR4302545.3307874/1‑94 (MQ=60)

              TTGCAACTCCAGTTGCAAGTTTAGTCATGAACGCGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGAT                                                                                 <  SRR4302545.1169203/94‑1 (MQ=60)

              TTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGAT                                                                                 <  SRR4302545.8814842/94‑1 (MQ=60)

                 CAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTG                                                                              >  SRR4302545.9356358/1‑94 (MQ=60)

                 CAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTC                                                                              <  SRR4302545.1883687/94‑1 (MQ=60)

                  AACACCAGTTGCACGTTGAGTCATGAACACGGCGGGTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCATCGATGTCG                                                                             >  SRR4302545.5367819/1‑94 (MQ=60)

                   ACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGT                                                                            >  SRR4302545.4587942/1‑94 (MQ=60)

                   ACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGT                                                                            >  SRR4302545.4587941/1‑94 (MQ=60)

                    CACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTA                                                                           >  SRR4302545.6461098/1‑94 (MQ=60)

                    CACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTA                                                                           >  SRR4302545.311390/1‑94 (MQ=60)

                     ACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTAT                                                                          >  SRR4302545.1958516/1‑94 (MQ=60)

                      CCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGACGGTCCACGCACCGATGTCGTATG                                                                         >  SRR4302545.5430902/1‑94 (MQ=60)

                      CCAGTTGCACGATGAGTCCTGAACACGTCGGTCTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCCGCGATGTCGTATG                                                                         >  SRR4302545.5430900/1‑94 (MQ=60)

                        AGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCT                                                                       >  SRR4302545.5311143/1‑94 (MQ=60)

                        AGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCT                                                                       >  SRR4302545.4086834/1‑94 (MQ=60)

                        AGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCT                                                                       <  SRR4302545.9290257/94‑1 (MQ=60)

                        AGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGATCCACGCACCGATGTCGTATGCT                                                                       >  SRR4302545.5957146/1‑94 (MQ=60)

                         GTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTA                                                                      <  SRR4302545.10081863/94‑1 (MQ=60)

                         GTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTA                                                                      >  SRR4302545.9312842/1‑94 (MQ=60)

                          TTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTAC                                                                     <  SRR4302545.7005695/94‑1 (MQ=60)

                          TTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTAC                                                                     <  SRR4302545.77824/94‑1 (MQ=60)

                          TTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTAACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTAC                                                                     >  SRR4302545.4401314/1‑94 (MQ=60)

                           TGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTGCA                                                                    <  SRR4302545.5510038/94‑1 (MQ=60)

                            GCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACAC                                                                   <  SRR4302545.9954631/94‑1 (MQ=60)

                             CACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACC                                                                  <  SRR4302545.1637982/94‑1 (MQ=60)

                              ACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCG                                                                 >  SRR4302545.3950261/1‑94 (MQ=60)

                              ACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCG                                                                 >  SRR4302545.1322139/1‑94 (MQ=60)

                               CGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGT                                                                >  SRR4302545.2020647/1‑94 (MQ=60)

                               CGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGT                                                                >  SRR4302545.6198328/1‑94 (MQ=60)

                               CGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGT                                                                >  SRR4302545.5282110/1‑94 (MQ=60)

                               CGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGT                                                                <  SRR4302545.7815390/94‑1 (MQ=60)

                                GTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTA                                                               <  SRR4302545.3332188/94‑1 (MQ=60)

                                 TTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAG                                                              <  SRR4302545.5091800/94‑1 (MQ=60)

                                 TTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAG                                                              <  SRR4302545.7811020/94‑1 (MQ=60)

                                  TGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGT                                                             <  SRR4302545.2226345/94‑1 (MQ=60)

                                   GAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTT                                                            <  SRR4302545.6362083/94‑1 (MQ=60)

                                   GAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTT                                                            <  SRR4302545.4194215/94‑1 (MQ=60)

                                    AGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTA                                                           <  SRR4302545.1308093/94‑1 (MQ=60)

                                     GTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTAC                                                          <  SRR4302545.8178788/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCTTAGTTACG                                                         <  SRR4302545.10696081/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         <  SRR4302545.7783469/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         <  SRR4302545.8825212/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         >  SRR4302545.81182/1‑94 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         <  SRR4302545.8290355/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         >  SRR4302545.2390216/1‑94 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACA                                                         <  SRR4302545.7376197/94‑1 (MQ=60)

                                      TCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACG                                                         <  SRR4302545.5331801/94‑1 (MQ=60)

                                       CATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGG                                                        >  SRR4302545.3472693/1‑94 (MQ=60)

                                        ATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCAACGCACCGATGTCGTATGCTACACCGTAGTTACGGC                                                       <  SRR4302545.10796221/94‑1 (MQ=60)

                                          GAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCG                                                     <  SRR4302545.2548836/94‑1 (MQ=60)

                                           AACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGTTACACCGTAGTTACGGCTGT                                                    >  SRR4302545.9928401/1‑94 (MQ=60)

                                           AACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGT                                                    >  SRR4302545.2027874/1‑94 (MQ=60)

                                            ACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTA                                                   >  SRR4302545.320202/1‑94 (MQ=60)

                                              ACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAAT                                                 >  SRR4302545.10261709/1‑94 (MQ=60)

                                              ACGTCGGTTTGAGTCCAAGGGTCACCACCGAGTTCTGGCAGGACGTCGGTCCACGCACCGAGGTCGTATGCTACACCGTAGTTACGGCCGTAAT                                                 <  SRR4302545.2744947/94‑1 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                <  SRR4302545.4999400/94‑1 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                >  SRR4302545.4764965/1‑94 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                <  SRR4302545.10065943/94‑1 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                >  SRR4302545.4413241/1‑94 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                <  SRR4302545.7880015/94‑1 (MQ=60)

                                               CGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                >  SRR4302545.9857588/1‑94 (MQ=60)

                                               AGTCGGTTTGAGTCCAAGTTTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATC                                                <  SRR4302545.7092384/94‑1 (MQ=60)

                                                GTCGGTTTGAGTCCAAGTGTCGCCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCG                                               <  SRR4302545.142456/94‑1 (MQ=60)

                                                GTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCG                                               >  SRR4302545.4365488/1‑94 (MQ=60)

                                                GTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCG                                               >  SRR4302545.4365487/1‑94 (MQ=60)

                                                 TCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGA                                              >  SRR4302545.7938586/1‑94 (MQ=60)

                                                  CGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAT                                             <  SRR4302545.72413/94‑1 (MQ=60)

                                                  CGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAT                                             <  SRR4302545.10815409/94‑1 (MQ=60)

                                                  CGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAT                                             >  SRR4302545.9442722/1‑94 (MQ=60)

                                                  CGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAT                                             <  SRR4302545.873796/94‑1 (MQ=60)

                                                  CGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAT                                             <  SRR4302545.10447942/94‑1 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            <  SRR4302545.2660601/94‑1 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            >  SRR4302545.2326738/1‑94 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            <  SRR4302545.3371079/94‑1 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            <  SRR4302545.7826880/94‑1 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            >  SRR4302545.5885743/1‑94 (MQ=60)

                                                   GGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            >  SRR4302545.6868279/1‑94 (MQ=60)

                                                   CGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATG                                            <  SRR4302545.7908340/94‑1 (MQ=60)

                                                    GTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGG                                           <  SRR4302545.4252651/94‑1 (MQ=60)

                                                    GTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGG                                           <  SRR4302545.4953947/94‑1 (MQ=60)

                                                    GTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGG                                           <  SRR4302545.4892421/94‑1 (MQ=60)

                                                    GTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGG                                           <  SRR4302545.10128230/94‑1 (MQ=60)

                                                     TTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGA                                          >  SRR4302545.7206152/1‑94 (MQ=60)

                                                     TTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGA                                          <  SRR4302545.3209593/94‑1 (MQ=60)

                                                      TTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAG                                         <  SRR4302545.3186032/94‑1 (MQ=60)

                                                       TGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGC                                        <  SRR4302545.10823985/94‑1 (MQ=60)

                                                        TAGTCCAAGTGTCACCTCCGAATTCTGGCAGGACGTAGGTCCACGCACCGATGTCGTAAGCTACCCCGTAGTTACGGCCGTAATCGATGGAGCC                                       <  SRR4302545.4828931/94‑1 (MQ=60)

                                                          GTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGT                                     <  SRR4302545.695547/94‑1 (MQ=60)

                                                          GTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGT                                     >  SRR4302545.9894158/1‑94 (MQ=60)

                                                          GTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGT                                     <  SRR4302545.4368899/94‑1 (MQ=60)

                                                          GTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGT                                     >  SRR4302545.395324/1‑94 (MQ=60)

                                                          GTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGT                                     >  SRR4302545.10095336/1‑94 (MQ=60)

                                                           TCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTA                                    <  SRR4302545.9807659/94‑1 (MQ=60)

                                                           TCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTA                                    >  SRR4302545.9042631/1‑94 (MQ=60)

                                                           TCCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTA                                    >  SRR4302545.4989659/1‑94 (MQ=60)

                                                            CCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAG                                   <  SRR4302545.7189269/94‑1 (MQ=60)

                                                            CCAAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAG                                   <  SRR4302545.8315510/94‑1 (MQ=60)

                                                              AAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTC                                 >  SRR4302545.3268279/1‑94 (MQ=60)

                                                              AAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTC                                 >  SRR4302545.3092773/1‑94 (MQ=60)

                                                              AAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTC                                 <  SRR4302545.3374302/94‑1 (MQ=60)

                                                              AAGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATAGAGCCGTAGTC                                 >  SRR4302545.2463808/1‑94 (MQ=60)

                                                               AGTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGGCA                                >  SRR4302545.4311653/1‑94 (MQ=60)

                                                                GTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCAC                               <  SRR4302545.7930455/94‑1 (MQ=60)

                                                                GTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCAC                               <  SRR4302545.1755673/94‑1 (MQ=60)

                                                                GTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCAC                               <  SRR4302545.6798208/94‑1 (MQ=60)

                                                                GTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCAC                               >  SRR4302545.10578316/1‑94 (MQ=60)

                                                                GTGTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCAC                               <  SRR4302545.9784131/94‑1 (MQ=60)

                                                                  GTCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCG                             <  SRR4302545.344453/94‑1 (MQ=60)

                                                                   TCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGA                            >  SRR4302545.9582812/1‑94 (MQ=60)

                                                                   TCACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGA                            >  SRR4302545.4041042/1‑94 (MQ=60)

                                                                    CACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAA                           >  SRR4302545.1731127/1‑94 (MQ=60)

                                                                     ACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAT                          >  SRR4302545.3004714/1‑94 (MQ=60)

                                                                     ACCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAAT                          >  SRR4302545.69614/1‑94 (MQ=60)

                                                                      CCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATT                         >  SRR4302545.5198408/1‑94 (MQ=60)

                                                                      CCACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATT                         >  SRR4302545.1220616/1‑94 (MQ=60)

                                                                       CACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTCTGCTACCCCGTAGTTACGGCCGTAATCGATGGACCCGTATTCACCGAATCT                        >  SRR4302545.6106511/1‑94 (MQ=60)

                                                                       CACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTT                        >  SRR4302545.4937526/1‑94 (MQ=60)

                                                                       CACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGGCGTATGCTACACAGTAGGTACGGCCGTAAGGGATTGAGCCGTAGTCgcgggattt                        >  SRR4302545.5233532/1‑85 (MQ=60)

                                                                       AACCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTT                        >  SRR4302545.5715737/1‑94 (MQ=60)

                                                                        CCCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTC                       <  SRR4302545.4535600/94‑1 (MQ=60)

                                                                         CCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCA                      >  SRR4302545.9767448/1‑94 (MQ=60)

                                                                         CCGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCA                      >  SRR4302545.9767447/1‑94 (MQ=60)

                                                                          CGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTAGGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAG                     <  SRR4302545.998117/94‑1 (MQ=60)

                                                                          CGAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAG                     >  SRR4302545.1351391/1‑94 (MQ=60)

                                                                          CGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAG                     <  SRR4302545.10408257/94‑1 (MQ=60)

                                                                           GAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGG                    >  SRR4302545.7239729/1‑94 (MQ=60)

                                                                           GAATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGG                    <  SRR4302545.4298416/94‑1 (MQ=60)

                                                                            AATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGC                   >  SRR4302545.8695697/1‑94 (MQ=60)

                                                                             ATTCTGGCAGTACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCC                  <  SRR4302545.6382800/94‑1 (MQ=60)

                                                                             ATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCC                  >  SRR4302545.5064202/1‑94 (MQ=60)

                                                                             ATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCC                  <  SRR4302545.764462/94‑1 (MQ=60)

                                                                             ATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCC                  <  SRR4302545.5382629/94‑1 (MQ=60)

                                                                             ATTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCC                  >  SRR4302545.469242/1‑94 (MQ=60)

                                                                              TTCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCA                 <  SRR4302545.6400832/94‑1 (MQ=60)

                                                                               TCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAG                <  SRR4302545.10211667/94‑1 (MQ=60)

                                                                               TCTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAG                >  SRR4302545.3299609/1‑94 (MQ=60)

                                                                                CTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGC               >  SRR4302545.9271512/1‑94 (MQ=60)

                                                                                CTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTACCCGAATTACAGGCCAGC               <  SRR4302545.9670464/94‑1 (MQ=60)

                                                                                CTGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGACGGAGCCGTAGTCACCGAATTTCAGGCCAGC               <  SRR4302545.7362179/94‑1 (MQ=60)

                                                                                 TGGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCG              <  SRR4302545.9784663/94‑1 (MQ=60)

                                                                                 TGACAGGACTGCAGTCCACGAACCTAGGTCTTATGCTACACCGTAGTTACGGCCGTAATCGTAGGAGCCGGAGTCACCGAATTTCAGGCCAGCG              <  SRR4302545.10914633/94‑1 (MQ=42)

                                                                                 GGGCAGGACGTCGGTCCACGCACCGATGGCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCG              <  SRR4302545.5416959/94‑1 (MQ=60)

                                                                                  GGCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGA             <  SRR4302545.1922860/94‑1 (MQ=60)

                                                                                   GCAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAA            <  SRR4302545.4571053/94‑1 (MQ=60)

                                                                                    CAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAG           >  SRR4302545.4016868/1‑94 (MQ=60)

                                                                                    CAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAG           <  SRR4302545.5404550/94‑1 (MQ=60)

                                                                                    CAGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAG           <  SRR4302545.8946714/94‑1 (MQ=60)

                                                                                    CAGGACGTCGGTCCACGCACCGATGTCGGATGCTACACCGTAGTTACGGCCGTAATCGATGGCGCCGTAGTCACCGAATTTACGGCCATCGAAG           >  SRR4302545.4899168/1‑94 (MQ=60)

                                                                                     AGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGG          >  SRR4302545.1020644/1‑94 (MQ=60)

                                                                                     AGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGG          <  SRR4302545.10685885/94‑1 (MQ=60)

                                                                                     AGGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGCTACGGCCGTAATCGATGGAGCCGTAGTTACCCAATTTCAGCCCAGCGAAGG          >  SRR4302545.6411743/1‑94 (MQ=60)

                                                                                      GGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGC         >  SRR4302545.1185610/1‑94 (MQ=60)

                                                                                      GGACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGC         <  SRR4302545.6166165/94‑1 (MQ=60)

                                                                                       GACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCA        <  SRR4302545.5323528/94‑1 (MQ=60)

                                                                                        ACGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAA       <  SRR4302545.7161581/94‑1 (MQ=60)

                                                                                         CGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAG      >  SRR4302545.6777667/1‑94 (MQ=60)

                                                                                         CGTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAAGCAAG      >  SRR4302545.2245363/1‑94 (MQ=60)

                                                                                         CGTCAGTCCACGCACCGATGTCGTATGCTGCACCGTAGTTCCGGCCGGAATCGATGGAGCCGTAGTCACCGAAGTTCAGGCCAGCGAAGGCAAG      <  SRR4302545.1401204/94‑1 (MQ=60)

                                                                                          GTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGGCAGCGAAGGCAAGA     >  SRR4302545.1424168/1‑94 (MQ=60)

                                                                                          GTCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGA     >  SRR4302545.7581798/1‑94 (MQ=60)

                                                                                           TCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGAC    >  SRR4302545.4368891/1‑94 (MQ=60)

                                                                                           TCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGAC    <  SRR4302545.2161283/94‑1 (MQ=60)

                                                                                           TCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGAC    <  SRR4302545.223844/94‑1 (MQ=60)

                                                                                           TCGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGAC    <  SRR4302545.4943963/94‑1 (MQ=60)

                                                                                            CGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACG   >  SRR4302545.5483838/1‑94 (MQ=60)

                                                                                            CGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGAAGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACG   >  SRR4302545.7288817/1‑94 (MQ=60)

                                                                                            CGGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCAGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGAAAGACG   >  SRR4302545.10570789/1‑94 (MQ=60)

                                                                                            CGGTCCACGCACCGATGTCGTATGCTACACCGTAGTCACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACG   >  SRR4302545.7288818/1‑94 (MQ=60)

                                                                                             GGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACGG  <  SRR4302545.7267014/94‑1 (MQ=60)

                                                                                             GGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACGG  <  SRR4302545.8450490/94‑1 (MQ=60)

GTTGTTACGATAGGTTGCAACACCAGTTGCACGTTGAGTCATGAACACGTCGGTTTGAGTCCAAGTGTCACCACCGAATTCTGGCAGGACGTCAGTCCACGCACCGATGTCGTATGCTACACCGTAGTTACGGCCGTAATCGATGGAGCCGTAGTCACCGAATTTCAGGCCAGCGAAGGCAAGACGG  >  NC_000913/575569‑575755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`