Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
RA |
NC_000913 |
767,322 |
T→C |
L41P (CTG→CCG) |
ybgG → |
putative sugar hydrolase |
|
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
* | NC_000913 | 767,322 | 0 | T | C | 98.5%
| 1102.6
/ 1.8
| 329 | L41P (CTG→CCG) | ybgG | putative sugar hydrolase |
Reads supporting (aligned to +/- strand): ref base T (3/2); new base C (189/135); total (192/137) |
Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
Only 100 of 337 total aligned reads displayed.
CGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC > NC_000913/767232‑767413
|
cGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGa > 2:3300004/1‑94 (MQ=255)
gCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGaa > 1:8448934/1‑94 (MQ=255)
atGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAgg > 2:1715600/1‑94 (MQ=255)
atGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAgg < 2:4728685/94‑1 (MQ=255)
tcccTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGAc < 2:3449365/91‑1 (MQ=255)
aCTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACaa > 1:7235128/1‑94 (MQ=255)
aCTGGGATCGAGAGTGGCATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATCATATGGAAGAGATCCTGTGCCGACCGGAACAGGActa > 1:202584/1‑92 (MQ=255)
cTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAAc > 2:5222697/1‑94 (MQ=255)
cTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAAc < 2:5063995/94‑1 (MQ=255)
gATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAAt > 2:3049555/1‑94 (MQ=255)
aTCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATa > 1:1016787/1‑94 (MQ=255)
agagTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACaaa > 2:5338093/1‑94 (MQ=255)
agagTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACaaa > 2:3630495/1‑94 (MQ=255)
agagTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACaaa > 1:463614/1‑94 (MQ=255)
agTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAata < 1:4029058/94‑1 (MQ=255)
tGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATAtt > 2:5091911/1‑94 (MQ=255)
ggTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTa < 2:4519856/94‑1 (MQ=255)
ggTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTa > 1:9906188/1‑94 (MQ=255)
ggTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTa < 1:3062085/94‑1 (MQ=255)
tATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACg < 2:4646255/94‑1 (MQ=255)
tATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACg > 2:5747297/1‑94 (MQ=255)
aTTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGt > 2:391292/1‑94 (MQ=255)
tttCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTa < 1:9884110/94‑1 (MQ=255)
tttCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTa < 2:9537838/94‑1 (MQ=255)
tttCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTa < 2:736351/94‑1 (MQ=255)
ttCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTAc < 1:10058650/94‑1 (MQ=255)
ttCACCACCGAAGAGTCACGTATTCTGCTGGTCAAGAATATGGGAGAGATCCTGTGCCGGCCGGAACAGGACAACGAATACAAATACTACGTAc > 2:3863845/1‑94 (MQ=255)
tCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACt > 1:2178305/1‑94 (MQ=255)
caccacCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTc < 2:10518006/94‑1 (MQ=255)
cccaccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCg < 1:4572787/93‑1 (MQ=255)
accaccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCg < 1:1693232/94‑1 (MQ=255)
ccaccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGa > 1:3823643/1‑94 (MQ=255)
caccGAAGAGTCACGTATTCTGCTTGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAc < 1:5013435/94‑1 (MQ=255)
caccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAc > 2:7483931/1‑94 (MQ=255)
caccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAc < 1:7754004/94‑1 (MQ=255)
caccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAc > 2:5489519/1‑94 (MQ=255)
caccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAc > 1:4187714/1‑94 (MQ=255)
ccGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACgg > 1:9045002/1‑94 (MQ=255)
cGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACggg > 1:7165312/1‑94 (MQ=255)
cGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACggg < 2:3317386/94‑1 (MQ=255)
cGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACggg > 2:10264100/1‑94 (MQ=255)
gAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGc > 1:6938052/1‑94 (MQ=255)
gAAGAGCCACGTATTCTGCTGGTCAATAATATGGAAGAGATACTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGc > 1:814843/1‑94 (MQ=255)
agagTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCaa > 2:6819122/1‑94 (MQ=255)
agTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAAc < 2:1922267/94‑1 (MQ=255)
tCACTTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACgg < 1:1608186/94‑1 (MQ=255)
tCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACgg > 1:181716/1‑94 (MQ=255)
gcACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACgg < 1:6035646/93‑1 (MQ=255)
aCGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCg < 1:1092169/94‑1 (MQ=255)
aCGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCg < 1:4939707/94‑1 (MQ=255)
cGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGa > 2:10051521/1‑94 (MQ=255)
cGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGa < 1:660437/94‑1 (MQ=255)
gTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGAt > 1:3483017/1‑94 (MQ=255)
gTATGCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTTCTCGACGGGCAAACGGCGAt < 1:8653452/94‑1 (MQ=255)
tATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGGACACGGCGATc > 1:10104646/1‑94 (MQ=255)
tATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATc < 1:10267482/94‑1 (MQ=255)
tATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATc < 2:893918/94‑1 (MQ=255)
gctgGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGaa < 1:975199/94‑1 (MQ=255)
ctgGTAAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAg > 1:5248411/1‑94 (MQ=255)
tgGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGa > 2:2836298/1‑94 (MQ=255)
gTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGatt > 1:2792563/1‑94 (MQ=255)
tCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGatta > 2:6596700/1‑94 (MQ=255)
tCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGatta > 1:3141989/1‑94 (MQ=255)
tCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGatta > 1:9775435/1‑94 (MQ=255)
cAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGattat > 2:5804382/1‑94 (MQ=255)
cAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGattat < 1:6670942/94‑1 (MQ=255)
aataatATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGattatt > 2:83922/1‑94 (MQ=255)
taataTGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTc < 1:5727106/94‑1 (MQ=255)
aataTGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTcg > 1:6380010/1‑94 (MQ=255)
atatGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTcgc > 2:163215/1‑94 (MQ=255)
atatGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTcgc > 2:7912031/1‑94 (MQ=255)
tatGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTcgcg < 2:4835434/94‑1 (MQ=255)
tatGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTcgcg < 2:6712346/94‑1 (MQ=255)
atGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGCATACCAATATTACGTCCTCGACGGGCAAACGGCGACCCTCAAAGCGTATTTCGCgg > 2:8726507/1‑94 (MQ=255)
atGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCgg > 1:5766141/1‑94 (MQ=255)
atGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCgg > 1:8925738/1‑94 (MQ=255)
tGGAAGAGATCCTGTGCCGACCGGAACCGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGt < 2:5716653/94‑1 (MQ=255)
tGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCggg > 1:953540/1‑93 (MQ=255)
ggAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTg > 2:1813613/1‑94 (MQ=255)
ggAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTg < 2:7695248/94‑1 (MQ=255)
ggAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTg > 2:5974840/1‑94 (MQ=255)
ggAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTg < 2:6875548/94‑1 (MQ=255)
agagATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGaaa > 2:9340068/1‑94 (MQ=255)
agagATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGaaa < 1:1330604/94‑1 (MQ=255)
agaTCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAAcc < 2:6958008/94‑1 (MQ=255)
gaTCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCg < 2:4316688/94‑1 (MQ=255)
aTCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCgg < 2:2282996/94‑1 (MQ=255)
ccTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGaa < 2:8082282/94‑1 (MQ=255)
cTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGaaa > 1:9299771/1‑94 (MQ=255)
cTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGaaa > 2:5643118/1‑94 (MQ=255)
tgtgCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGaaaa < 2:5865868/94‑1 (MQ=255)
gtgCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAAc > 2:3879049/1‑94 (MQ=255)
gtgCCGACCGGAACAGGAAAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAAc > 2:10448729/1‑94 (MQ=255)
tgCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACa < 2:2617151/94‑1 (MQ=255)
tgCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACa > 1:6225796/1‑94 (MQ=255)
cGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAg < 2:6207477/94‑1 (MQ=255)
cGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAg > 1:2921638/1‑94 (MQ=255)
gACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGa > 1:2525379/1‑94 (MQ=255)
gACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGa > 1:6545997/1‑94 (MQ=255)
gACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGGTACACCGGAAAACAAAGa > 2:1373605/1‑94 (MQ=255)
|
CGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC > NC_000913/767232‑767413
|
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCG > NC_000913/767229‑767415
|
CCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACC < SRR4302545.2244661/94‑1 (MQ=60)
CCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACC > SRR4302545.2221050/1‑94 (MQ=60)
CGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGA > SRR4302545.6878660/1‑94 (MQ=60)
GCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAA > SRR4302545.10499370/1‑94 (MQ=60)
GCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAA > SRR4302545.8693195/1‑94 (MQ=60)
GCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAA > SRR4302545.2086022/1‑94 (MQ=60)
GCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAA > SRR4302545.6658152/1‑94 (MQ=60)
CATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAAC < SRR4302545.4225240/94‑1 (MQ=60)
ATATGCACTGGGATCGAGAGTGTTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACA < SRR4302545.1213428/94‑1 (MQ=60)
TATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAG < SRR4302545.1958699/94‑1 (MQ=60)
TATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAG < SRR4302545.2807902/94‑1 (MQ=60)
TATGCACTGGGATCGAGAGTGGGGTTTCACCACCGCAAAGTCACGGATTCTGCTGGTCAATAATATGTAAGAGATCATGTGGCGGCCGGAACAG > SRR4302545.10174916/1‑94 (MQ=46)
ATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGG > SRR4302545.4901601/1‑94 (MQ=60)
ATGCACTGCGATCTAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGG < SRR4302545.10046125/94‑1 (MQ=60)
TGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGA < SRR4302545.1138110/94‑1 (MQ=60)
GCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGAC < SRR4302545.1002104/94‑1 (MQ=60)
CACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACA > SRR4302545.10558725/1‑94 (MQ=60)
CACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACA < SRR4302545.3925608/94‑1 (MQ=60)
CACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACA > SRR4302545.10060582/1‑94 (MQ=60)
ACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAA > SRR4302545.7437388/1‑94 (MQ=60)
ACTGGGATCGAGAGTGGCATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATCATATGGAAGAGATCCTGTGCCGACCGGAACAGGACTA > SRR4302545.206804/1‑94 (MQ=60)
TGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACG > SRR4302545.5461051/1‑94 (MQ=60)
TGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACG < SRR4302545.10197280/94‑1 (MQ=60)
TGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACG > SRR4302545.3205337/1‑94 (MQ=60)
TGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACG < SRR4302545.42186/94‑1 (MQ=60)
GGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAA > SRR4302545.6540358/1‑94 (MQ=60)
GATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAAT < SRR4302545.8134781/94‑1 (MQ=60)
GATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAAT > SRR4302545.5140429/1‑94 (MQ=60)
GATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAAT > SRR4302545.904072/1‑94 (MQ=60)
ATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATA > SRR4302545.295682/1‑94 (MQ=60)
ATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATA < SRR4302545.8725339/94‑1 (MQ=60)
ATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATA > SRR4302545.7491883/1‑94 (MQ=60)
ATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATA > SRR4302545.1039203/1‑94 (MQ=60)
TCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATAA > SRR4302545.10440218/1‑94 (MQ=60)
AGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACGGGACAACGAATAAAAA > SRR4302545.3536706/1‑94 (MQ=60)
AGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAA < SRR4302545.6601055/94‑1 (MQ=60)
AGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAA > SRR4302545.473951/1‑94 (MQ=60)
GAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAAT > SRR4302545.10515748/1‑94 (MQ=60)
AGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATA < SRR4302545.4129900/94‑1 (MQ=60)
TGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATT > SRR4302545.7224483/1‑94 (MQ=60)
TGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATT < SRR4302545.983380/94‑1 (MQ=60)
TGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATT < SRR4302545.94598/94‑1 (MQ=60)
GGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTA < SRR4302545.4706683/94‑1 (MQ=60)
GGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTA < SRR4302545.3137156/94‑1 (MQ=60)
GGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTA > SRR4302545.10200474/1‑94 (MQ=60)
GGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTA > SRR4302545.2318123/1‑94 (MQ=60)
GTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTAC < SRR4302545.6155200/94‑1 (MQ=60)
GTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTAC > SRR4302545.1658687/1‑94 (MQ=60)
GTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTAC > SRR4302545.7022258/1‑94 (MQ=60)
GTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTAC < SRR4302545.1491736/94‑1 (MQ=60)
TTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTA < SRR4302545.10177786/94‑1 (MQ=60)
TTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTA < SRR4302545.6710816/94‑1 (MQ=60)
TTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTAC < SRR4302545.10356344/94‑1 (MQ=60)
TTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTAC < SRR4302545.7982569/94‑1 (MQ=60)
TTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTAC > SRR4302545.5873110/1‑94 (MQ=60)
TCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACT > SRR4302545.2231541/1‑94 (MQ=60)
TCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACT > SRR4302545.5833791/1‑94 (MQ=60)
CACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTC < SRR4302545.9809639/94‑1 (MQ=60)
CACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTC < SRR4302545.713584/94‑1 (MQ=60)
CCCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCG < SRR4302545.4690018/94‑1 (MQ=60)
ACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCG < SRR4302545.1733453/94‑1 (MQ=60)
ACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCG > SRR4302545.486885/1‑94 (MQ=60)
ACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCG > SRR4302545.4222153/1‑94 (MQ=60)
CCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGA < SRR4302545.5341890/94‑1 (MQ=60)
CCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGA > SRR4302545.3918834/1‑94 (MQ=60)
CCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGA > SRR4302545.10368298/1‑94 (MQ=60)
CCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGA > SRR4302545.10368299/1‑94 (MQ=60)
CACCGAAGAGTCACGTATTCTGCTTGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAC < SRR4302545.5140541/94‑1 (MQ=60)
CACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAC < SRR4302545.7973443/94‑1 (MQ=60)
CACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAC > SRR4302545.10420812/1‑94 (MQ=60)
CACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGAC > SRR4302545.4292230/1‑94 (MQ=60)
ACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACG > SRR4302545.10101772/1‑94 (MQ=60)
ACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACG > SRR4302545.10893783/1‑94 (MQ=60)
ACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACG < SRR4302545.6804315/94‑1 (MQ=60)
CCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGG > SRR4302545.9308825/1‑94 (MQ=60)
CGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGG > SRR4302545.7364310/1‑94 (MQ=60)
CGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGG > SRR4302545.7364309/1‑94 (MQ=60)
GAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGC > SRR4302545.7129278/1‑94 (MQ=60)
GAAGAGCCACGTATTCTGCTGGTCAATAATATGGAAGAGATACTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGC > SRR4302545.833121/1‑94 (MQ=60)
AAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCA > SRR4302545.2103912/1‑94 (MQ=60)
AAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCA > SRR4302545.1378000/1‑94 (MQ=60)
AAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCA < SRR4302545.3709960/94‑1 (MQ=60)
AGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAA > SRR4302545.7417806/1‑94 (MQ=60)
AGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAA > SRR4302545.2068519/1‑94 (MQ=60)
AGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAA > SRR4302545.4700784/1‑94 (MQ=60)
GTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACG < SRR4302545.8447236/94‑1 (MQ=60)
TCACTTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGG < SRR4302545.1646372/94‑1 (MQ=60)
TCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATTCAAATATTACGTACTCGACGGGCAAACGG < SRR4302545.306411/94‑1 (MQ=60)
TCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGG > SRR4302545.185584/1‑94 (MQ=60)
GCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGG < SRR4302545.6198796/94‑1 (MQ=60)
ACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCG < SRR4302545.996680/94‑1 (MQ=60)
ACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCG < SRR4302545.1115858/94‑1 (MQ=60)
ACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCG < SRR4302545.5064945/94‑1 (MQ=60)
ACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCG > SRR4302545.1701528/1‑94 (MQ=60)
CGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGA < SRR4302545.675142/94‑1 (MQ=60)
GTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGAT > SRR4302545.3568403/1‑94 (MQ=60)
GTATGCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTTCTCGACGGGCAAACGGCGAT < SRR4302545.8904463/94‑1 (MQ=60)
TATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGGACACGGCGATC > SRR4302545.10403509/1‑94 (MQ=60)
TATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATC < SRR4302545.5132630/94‑1 (MQ=60)
TATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATC < SRR4302545.10570402/94‑1 (MQ=60)
ATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCC > SRR4302545.8718784/1‑94 (MQ=60)
TTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCT < SRR4302545.5899353/94‑1 (MQ=60)
TTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCT < SRR4302545.5899352/94‑1 (MQ=60)
TTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCT > SRR4302545.10031303/1‑94 (MQ=60)
TCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTC < SRR4302545.10194130/94‑1 (MQ=60)
TCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTC < SRR4302545.3123102/94‑1 (MQ=60)
CTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCG > SRR4302545.10288609/1‑94 (MQ=60)
GCTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAA < SRR4302545.996989/94‑1 (MQ=60)
CTGGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAG > SRR4302545.857643/1‑94 (MQ=60)
CTGGTAAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAG > SRR4302545.5383953/1‑94 (MQ=60)
GGTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGAT < SRR4302545.4611143/94‑1 (MQ=60)
GTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATT > SRR4302545.9354259/1‑94 (MQ=60)
GTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATT < SRR4302545.238011/94‑1 (MQ=60)
GTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATT > SRR4302545.2860055/1‑94 (MQ=60)
GTCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATT > SRR4302545.2860056/1‑94 (MQ=60)
TCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTA > SRR4302545.10066138/1‑94 (MQ=60)
TCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTA < SRR4302545.3090968/94‑1 (MQ=60)
TCAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTA > SRR4302545.3219391/1‑94 (MQ=60)
CAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTAT < SRR4302545.619433/94‑1 (MQ=60)
CAATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTAT < SRR4302545.6853857/94‑1 (MQ=60)
ATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTT > SRR4302545.5288993/1‑94 (MQ=60)
ATAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTT > SRR4302545.1635386/1‑94 (MQ=60)
TAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTG > SRR4302545.1875496/1‑94 (MQ=60)
TAATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTC < SRR4302545.5880767/94‑1 (MQ=60)
AATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCG > SRR4302545.6554426/1‑94 (MQ=60)
AATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCG > SRR4302545.6554429/1‑94 (MQ=60)
AATATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCG > SRR4302545.1775555/1‑94 (MQ=60)
TATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCG < SRR4302545.8990056/94‑1 (MQ=60)
TATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCG > SRR4302545.9799865/1‑94 (MQ=60)
AATGGAAGAGATCCTGTGCCGCCCGGAACAGGACAACGAATACAAATATTCCGTACTCGACGGGCtaactgcggtcctcgccaataatttcgcg > SRR4302545.9799866/1‑65 (MQ=60)
ATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGG > SRR4302545.9185251/1‑94 (MQ=60)
ATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGG > SRR4302545.2700629/1‑94 (MQ=60)
ATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGG < SRR4302545.3281215/94‑1 (MQ=60)
ATGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGG > SRR4302545.5921067/1‑94 (MQ=60)
TGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGT > SRR4302545.9256047/1‑94 (MQ=60)
TGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGT < SRR4302545.2396554/94‑1 (MQ=60)
TGGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGG > SRR4302545.974980/1‑94 (MQ=60)
GGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTG > SRR4302545.6821906/1‑94 (MQ=60)
GGAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTG > SRR4302545.6218468/1‑94 (MQ=60)
GAAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGATGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGA > SRR4302545.8570073/1‑94 (MQ=60)
AAGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGACTATTTCGCGGTGAA > SRR4302545.6753862/1‑94 (MQ=60)
AAGAGACCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGAGCCTCGAAGATTACTTCGCGGTGTA > SRR4302545.6753863/1‑94 (MQ=60)
AGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAA < SRR4302545.1360220/94‑1 (MQ=60)
AGAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAA > SRR4302545.5944921/1‑94 (MQ=60)
GAGATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAAC > SRR4302545.9297505/1‑94 (MQ=60)
GATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCG < SRR4302545.7823781/94‑1 (MQ=60)
ATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGacaaaccga > SRR4302545.10754220/1‑85 (MQ=60)
ATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGG > SRR4302545.10121883/1‑94 (MQ=60)
ATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGG < SRR4302545.4512955/94‑1 (MQ=60)
ATCCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGG < SRR4302545.7022627/94‑1 (MQ=60)
TCCTGTGCCGACCGGAACAGGACAACGAATCCAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGA > SRR4302545.3680051/1‑94 (MQ=60)
CCTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAA < SRR4302545.3216492/94‑1 (MQ=60)
CTGTGCCGACCGGAACAGGACAGCGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAA > SRR4302545.9572412/1‑94 (MQ=60)
CTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAA > SRR4302545.9256260/1‑94 (MQ=60)
CTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAA < SRR4302545.3920647/94‑1 (MQ=60)
CTGTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAA > SRR4302545.3828376/1‑94 (MQ=60)
GTGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAAC > SRR4302545.7573549/1‑94 (MQ=60)
TGCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACA > SRR4302545.6395414/1‑94 (MQ=60)
GCCGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAA > SRR4302545.6287930/1‑94 (MQ=60)
CGACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAG > SRR4302545.2992578/1‑94 (MQ=60)
GACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGA > SRR4302545.5031843/1‑94 (MQ=60)
GACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGA > SRR4302545.2586391/1‑94 (MQ=60)
GACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGA > SRR4302545.6725072/1‑94 (MQ=60)
GACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGA > SRR4302545.1840728/1‑94 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC > SRR4302545.10183107/1‑94 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC > SRR4302545.1563245/1‑94 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC > SRR4302545.7792098/1‑94 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC < SRR4302545.4599880/94‑1 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGAC < SRR4302545.4599881/94‑1 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGCGAAACCGGAAAATAAAGAC > SRR4302545.9669452/1‑94 (MQ=60)
ACCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCACGGTGAAACCGGAAAACAAAGAC > SRR4302545.7792097/1‑94 (MQ=60)
CCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACC > SRR4302545.5462944/1‑94 (MQ=60)
CCGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACC < SRR4302545.7580119/94‑1 (MQ=60)
CGGAACAGGACAACGAATACAACTATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCG < SRR4302545.3497182/94‑1 (MQ=60)
CGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCG > SRR4302545.10846401/1‑94 (MQ=60)
CGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCA < SRR4302545.4996485/94‑1 (MQ=60)
CGGAACAGGACAACGAATACAAATATTACGTACTCGACGGACAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCG > SRR4302545.428074/1‑94 (MQ=60)
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CCCCGCATATGCACTGGGATCGAGAGTGGTATTTCACCACCGAAGAGTCACGTATTCTGCTGGTCAATAATATGGAAGAGATCCTGTGCCGACTGGAACAGGACAACGAATACAAATATTACGTACTCGACGGGCAAACGGCGATCCTCGAAGATTATTTCGCGGTGAAACCGGAAAACAAAGACCG > NC_000913/767229‑767415
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Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |