Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
647 |
270.1 |
21258240 |
98.4% |
20918108 |
94.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
768,447 |
A→G |
D416G (GAC→GGC) |
ybgG → |
putative sugar hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 768,447 | 0 | A | G | 99.7%
| 996.8
/ ‑5.8
| 295 | D416G (GAC→GGC) | ybgG | putative sugar hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (140/154); total (140/155) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 |
Only 100 of 310 total aligned reads displayed.
AAACTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA > NC_000913/768356‑768537
|
aaaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg > 2:6831397/1‑94 (MQ=255)
aaaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg < 1:126262/94‑1 (MQ=255)
aaaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg > 2:9696863/1‑94 (MQ=255)
aaaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg < 1:5621487/94‑1 (MQ=255)
aaaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg < 2:3377855/94‑1 (MQ=255)
aaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGa > 1:1346771/1‑94 (MQ=255)
aaCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGa < 1:502431/94‑1 (MQ=255)
aCTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAt < 2:566121/94‑1 (MQ=255)
cGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcgc > 1:7502773/1‑94 (MQ=255)
cGTCCTGTTT‑ACCTTGTGCCCTGGGCCCCTTGAAGAA‑TTTTCCACCCCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcgcg < 2:1776918/94‑1 (MQ=255)
gTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcgcg < 1:1892270/94‑1 (MQ=255)
cTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTc < 1:3427885/94‑1 (MQ=255)
cTGTTTAACCTGATGCCCT‑GCCCGCGCGAAGTAGTTATCAACACCACAGGGCGGCTGCGCGACCGACTGTTTAATTTGCAGGGCGTTCGCGGTc > 2:7048706/1‑94 (MQ=255)
tGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCa < 2:5894607/94‑1 (MQ=255)
gTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAg < 1:677584/94‑1 (MQ=255)
gTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAg < 2:8402185/94‑1 (MQ=255)
gTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAg < 1:10416785/94‑1 (MQ=255)
tttAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGc < 1:436498/94‑1 (MQ=255)
tAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGGCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGcat > 1:3476212/1‑92 (MQ=255)
tAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCt < 1:1567728/94‑1 (MQ=255)
aaCCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTg < 2:4162322/94‑1 (MQ=255)
cTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAc < 1:4024944/94‑1 (MQ=255)
cTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAc > 2:5009972/1‑94 (MQ=255)
tGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAcc > 2:1494190/1‑94 (MQ=255)
tGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGAGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAcc > 2:3743788/1‑94 (MQ=255)
cccT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAtt > 1:9381221/1‑94 (MQ=255)
ccT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAttt > 1:7399618/1‑94 (MQ=255)
cT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAtttt > 2:5305655/1‑94 (MQ=255)
cT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAtttt > 2:2350801/1‑94 (MQ=255)
cT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAtttt < 2:7202131/94‑1 (MQ=255)
ggCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAt < 2:3938064/94‑1 (MQ=255)
gCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAtt < 2:6203890/94‑1 (MQ=255)
cgcgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCg < 1:5386534/94‑1 (MQ=255)
cgcgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCg < 1:2297156/94‑1 (MQ=255)
cgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGcc < 2:6681496/94‑1 (MQ=255)
cgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGcc > 1:8271660/1‑94 (MQ=255)
gTGAAGAAGTTATCAACACCACTGTGCGGCTGAGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCa < 1:6958526/94‑1 (MQ=255)
gaagaaGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATg < 2:9207714/94‑1 (MQ=255)
agaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGcc > 1:6492556/1‑94 (MQ=255)
aagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCg > 1:6274535/1‑94 (MQ=255)
agTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCgc > 1:10494403/1‑93 (MQ=255)
agTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGt > 2:3208442/1‑94 (MQ=255)
agTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGt < 2:2094787/94‑1 (MQ=255)
agTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGGCAGCCTGTACCGTATTTTATTCGCCATGCCCGt > 2:4407367/1‑94 (MQ=255)
gTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTg < 2:8555008/94‑1 (MQ=255)
gTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTg > 1:3609809/1‑94 (MQ=255)
ttATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTga > 2:10490617/1‑94 (MQ=255)
aTCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCgaga < 1:7375909/94‑1 (MQ=255)
tCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgat < 2:2937349/94‑1 (MQ=255)
tCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgat < 1:7987591/94‑1 (MQ=255)
tCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgat < 1:7589530/94‑1 (MQ=255)
cAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatc < 1:5137084/94‑1 (MQ=255)
cAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgatc > 1:8951524/1‑94 (MQ=255)
cAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgatc < 2:939792/94‑1 (MQ=255)
cAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATGTTATTCGCCATGCCCGCGAgatc > 1:7555260/1‑94 (MQ=255)
acacCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgatcga > 1:10016869/1‑94 (MQ=255)
acacCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgatcga < 1:5683167/94‑1 (MQ=255)
caccacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcgat > 1:5944072/1‑94 (MQ=255)
caccacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAgatcgat > 1:1921808/1‑94 (MQ=255)
cacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATccg > 2:8782908/1‑93 (MQ=255)
acTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAg > 2:7617442/1‑94 (MQ=255)
cTGTGCTGCTGCGCCCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAgg < 1:8144614/94‑1 (MQ=255)
cTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAgg < 1:873375/94‑1 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGc < 2:8832291/94‑1 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGc < 1:3138/94‑1 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGc < 1:9259048/94‑1 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGc > 2:1175830/1‑94 (MQ=255)
gtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGcc > 2:2561701/1‑94 (MQ=255)
tgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCt > 1:3073240/1‑94 (MQ=255)
gCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTa < 1:5349620/94‑1 (MQ=255)
cGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTaa > 2:3270951/1‑94 (MQ=255)
cGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTaa < 2:546744/94‑1 (MQ=255)
ggCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAat > 2:7279825/1‑94 (MQ=255)
ggCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAat > 2:9057039/1‑94 (MQ=255)
ggCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAat > 1:10147910/1‑94 (MQ=255)
cTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcg > 1:1783695/1‑94 (MQ=255)
cTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcg < 2:8104347/94‑1 (MQ=255)
cgcgcCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcgatc < 2:8698747/94‑1 (MQ=255)
cgcgcCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAatcgatc > 2:9326893/1‑94 (MQ=255)
gcgcCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcgatcg < 2:9565018/94‑1 (MQ=255)
cgcCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCgg < 2:3490829/94‑1 (MQ=255)
gccagccaGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc > 1:2466432/1‑94 (MQ=255)
gccagccaGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc > 2:1122623/1‑94 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCa > 2:4853119/1‑94 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCa < 1:9558728/94‑1 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCa > 2:6481135/1‑94 (MQ=255)
ccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa > 1:6018603/1‑94 (MQ=255)
ccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa > 1:4740630/1‑94 (MQ=255)
ccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa > 2:4465370/1‑94 (MQ=255)
cagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAg > 2:2015333/1‑94 (MQ=255)
cagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAg < 2:1509621/94‑1 (MQ=255)
agTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGNCCTAATCGATCGGNAAATAgn > 2:8925733/1‑93 (MQ=255)
agTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGt < 1:5084166/94‑1 (MQ=255)
gTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGtt > 1:5897034/1‑94 (MQ=255)
aaTTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAtt > 1:8539073/1‑94 (MQ=255)
ttGCGGGACGATCGCGGGCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACg < 2:5218462/94‑1 (MQ=255)
tGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACgg > 1:7713641/1‑94 (MQ=255)
tGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACgg < 1:6990211/94‑1 (MQ=255)
ggggCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTaa > 2:8213697/1‑94 (MQ=255)
ggggCGATCGCGCTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTaa < 1:9708743/94‑1 (MQ=255)
|
AAACTCGTCCTGTTTAACCTGATGCCCT‑GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA > NC_000913/768356‑768537
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT > NC_000913/768354‑768539
|
CCAAACTCGTCCTGTTTAACCTTATGCCCTGTCCGCGTGAAGAAGGTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGG < SRR4302545.3780521/94‑1 (MQ=60)
ACAAACTCTTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCGCTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGG < SRR4302545.2162729/94‑1 (MQ=60)
ACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGG < SRR4302545.10865998/94‑1 (MQ=60)
ACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGG < SRR4302545.4160667/94‑1 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG < SRR4302545.5770865/94‑1 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG < SRR4302545.129117/94‑1 (MQ=60)
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTTCGGGGCGA > SRR4302545.5513258/1‑94 (MQ=60)
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGA > SRR4302545.1376837/1‑94 (MQ=60)
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGA < SRR4302545.513705/94‑1 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAT < SRR4302545.1659017/94‑1 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAT < SRR4302545.1586241/94‑1 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAT < SRR4302545.5661437/94‑1 (MQ=60)
CTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATC < SRR4302545.8426971/94‑1 (MQ=60)
CTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATC > SRR4302545.684885/1‑94 (MQ=60)
CTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATC < SRR4302545.9849173/94‑1 (MQ=60)
CTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATC < SRR4302545.1379675/94‑1 (MQ=60)
TCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCG < SRR4302545.10728505/94‑1 (MQ=60)
CGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGC > SRR4302545.7715081/1‑94 (MQ=60)
CGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGC > SRR4302545.10615961/1‑94 (MQ=60)
GTCGTGTTTAACCTGATTCCCTGTCCTTTTGAAGAAGTTATCAACACCACGGTGCGGCTGCGCGCCAGCCAATGTAATTTGCGGGGCGATCttg < SRR4302545.1938885/94‑4 (MQ=39)
GTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCG < SRR4302545.1938886/94‑1 (MQ=60)
TCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGG > SRR4302545.3867794/1‑94 (MQ=60)
CTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTC < SRR4302545.3511653/94‑1 (MQ=60)
CTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTC < SRR4302545.5198118/94‑1 (MQ=60)
GTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAG < SRR4302545.10723776/94‑1 (MQ=60)
GTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAG < SRR4302545.692675/94‑1 (MQ=60)
TTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGC < SRR4302545.446202/94‑1 (MQ=60)
TTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCC < SRR4302545.7515590/94‑1 (MQ=60)
TAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGGCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCAT > SRR4302545.3561394/1‑94 (MQ=60)
TAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCT < SRR4302545.1604632/94‑1 (MQ=60)
TAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCT > SRR4302545.3561395/1‑94 (MQ=60)
TAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCT < SRR4302545.3216418/94‑1 (MQ=60)
AACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTG > SRR4302545.7599709/1‑94 (MQ=60)
CCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGTGGCGATCGCGGTCAGCCTGTA < SRR4302545.6056530/94‑1 (MQ=60)
CCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTA > SRR4302545.4205342/1‑94 (MQ=60)
CCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTA > SRR4302545.4910525/1‑94 (MQ=60)
CTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAC < SRR4302545.4125672/94‑1 (MQ=60)
CTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAC > SRR4302545.6067732/1‑94 (MQ=60)
GATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCG > SRR4302545.5327223/1‑94 (MQ=60)
ATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGT > SRR4302545.4152320/1‑94 (MQ=60)
TGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTA < SRR4302545.8494216/94‑1 (MQ=60)
CCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATT > SRR4302545.9656527/1‑94 (MQ=60)
CCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATT > SRR4302545.9656528/1‑94 (MQ=60)
CCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTT > SRR4302545.7608550/1‑94 (MQ=60)
CTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTT > SRR4302545.10097939/1‑94 (MQ=60)
CTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTT > SRR4302545.5729904/1‑94 (MQ=60)
CTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTT > SRR4302545.3553917/1‑94 (MQ=60)
GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAT < SRR4302545.10765146/94‑1 (MQ=60)
GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAT < SRR4302545.3240430/94‑1 (MQ=60)
CCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTC < SRR4302545.6301534/94‑1 (MQ=60)
CGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCG < SRR4302545.5526785/94‑1 (MQ=60)
CGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCG < SRR4302545.5525018/94‑1 (MQ=60)
CGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCG < SRR4302545.6904855/94‑1 (MQ=60)
CGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCG < SRR4302545.5805170/94‑1 (MQ=60)
CGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCG < SRR4302545.2353099/94‑1 (MQ=60)
CGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGTGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCC < SRR4302545.828154/94‑1 (MQ=60)
CGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCC > SRR4302545.6540500/1‑94 (MQ=60)
CGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCC > SRR4302545.8511097/1‑94 (MQ=60)
CGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCC > SRR4302545.3623151/1‑94 (MQ=60)
GTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCA < SRR4302545.4097345/94‑1 (MQ=60)
GTGAAGAAGTTATCAACACCACTGTGCGGCTGAGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCA < SRR4302545.7150358/94‑1 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT < SRR4302545.988554/94‑1 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302545.9206764/1‑94 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302545.1139538/1‑94 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302545.9206763/1‑94 (MQ=60)
GAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATG < SRR4302545.8918054/94‑1 (MQ=60)
AAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGAGGTCAGCCTGTACCGTATTTTATTCGCCATGC > SRR4302545.6008341/1‑94 (MQ=60)
AGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCC > SRR4302545.2474049/1‑94 (MQ=60)
AGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCC > SRR4302545.6670076/1‑94 (MQ=60)
AAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCG > SRR4302545.6538271/1‑94 (MQ=60)
AAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCG > SRR4302545.6445607/1‑94 (MQ=60)
AGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGC > SRR4302545.10803742/1‑94 (MQ=60)
GTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTG < SRR4302545.7595194/94‑1 (MQ=60)
GTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTG > SRR4302545.3697806/1‑94 (MQ=60)
GTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCG < SRR4302545.4943241/94‑1 (MQ=60)
TTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGA < SRR4302545.8101466/94‑1 (MQ=60)
ATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGA < SRR4302545.7583869/94‑1 (MQ=60)
ATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGA > SRR4302545.4799467/1‑94 (MQ=60)
TCAACACCCCTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGAT < SRR4302545.9642215/94‑1 (MQ=60)
TCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGAT < SRR4302545.8214773/94‑1 (MQ=60)
TCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGAT < SRR4302545.7804180/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC < SRR4302545.5268989/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC < SRR4302545.5268986/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC < SRR4302545.7149992/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC > SRR4302545.7161645/1‑94 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATC > SRR4302545.9211882/1‑94 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATGTTATTCGCCATGCCCGCGAGATC > SRR4302545.7768826/1‑94 (MQ=60)
CAACACCACTGTGCGGCTGCGCGACAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATC < SRR4302545.7801845/94‑1 (MQ=60)
AACACCACTGTGCGGCTGTGTGCCAGCCTGTTTAATTTGCGGGGTGATCGCGGTCAGCCTGTACCTTATTTTATTCGTCTTGTCCGTTAGATCG > SRR4302545.9960827/1‑94 (MQ=48)
AACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCG > SRR4302545.2340159/1‑94 (MQ=60)
AACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCG > SRR4302545.7663693/1‑94 (MQ=60)
ACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGA > SRR4302545.3539810/1‑94 (MQ=60)
ACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGA > SRR4302545.10313767/1‑94 (MQ=60)
ACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGA < SRR4302545.5835106/94‑1 (MQ=60)
ACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGA < SRR4302545.5835105/94‑1 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT > SRR4302545.6104442/1‑94 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT > SRR4302545.1640941/1‑94 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGAT > SRR4302545.1969317/1‑94 (MQ=60)
ACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATC < SRR4302545.8521550/94‑1 (MQ=60)
CCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCA > SRR4302545.2293556/1‑94 (MQ=60)
CCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCC < SRR4302545.6423207/94‑1 (MQ=60)
CCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCC < SRR4302545.6423209/94‑1 (MQ=60)
CACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCGTGCCCGCGAGATCGATCCA > SRR4302545.5348562/1‑94 (MQ=60)
CACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCA < SRR4302545.3154540/94‑1 (MQ=60)
CCTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAG < SRR4302545.8164913/94‑1 (MQ=60)
CTGTGCTGCTGCGCCCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302545.8379928/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302545.892971/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302545.6980465/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG > SRR4302545.7830226/1‑94 (MQ=60)
CGGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302545.4941500/94‑1 (MQ=60)
TGTGCGGCTGCGCGCCGGCCATTTTAATTTGCGGGGCAACGGCGGTCGGCCTGTACCGTATTTTATTCCCCATCCCCGTGcaatgcatccaggc > SRR4302545.6965017/1‑80 (MQ=28)
TGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGCGATCGATCCAGGC > SRR4302545.9781261/1‑94 (MQ=60)
TGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGC > SRR4302545.9781259/1‑94 (MQ=60)
TGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGC > SRR4302545.5910247/1‑94 (MQ=60)
TGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGC < SRR4302545.9530507/94‑1 (MQ=60)
TGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGC < SRR4302545.3207/94‑1 (MQ=60)
GTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCC < SRR4302545.7261158/94‑1 (MQ=60)
TGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCT > SRR4302545.3148647/1‑94 (MQ=60)
TGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCT > SRR4302545.5232768/1‑94 (MQ=60)
TGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCT > SRR4302545.1948612/1‑94 (MQ=60)
GCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTA < SRR4302545.5488596/94‑1 (MQ=60)
GCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATACAGGCCTA < SRR4302545.8345339/94‑1 (MQ=60)
GGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAAT > SRR4302545.713350/1‑94 (MQ=60)
GGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAAT > SRR4302545.10447988/1‑94 (MQ=60)
GCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATC < SRR4302545.7767643/94‑1 (MQ=60)
GATGCGCGCCAGCCAGTTTAATTTGCGGGGAGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGACTAATC < SRR4302545.2895345/94‑1 (MQ=60)
CTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCG > SRR4302545.1826561/1‑94 (MQ=60)
GCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGAT < SRR4302545.9478374/94‑1 (MQ=60)
CGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATC < SRR4302545.1871827/94‑1 (MQ=60)
GCGCCAGCCAGTTTAATTTGCGGTGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCG < SRR4302545.7803476/94‑1 (MQ=60)
GCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCG < SRR4302545.7728244/94‑1 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCTTGAGATCGTTCCAGtcctattagctggga > SRR4302545.7834104/1‑79 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302545.2526131/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302545.10373967/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302545.9394167/1‑94 (MQ=60)
CCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCA < SRR4302545.9840454/94‑1 (MQ=60)
CAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAA < SRR4302545.3207448/94‑1 (MQ=60)
AGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAA > SRR4302545.10558009/1‑94 (MQ=60)
GCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAAT > SRR4302545.6149642/1‑94 (MQ=60)
CCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATA < SRR4302545.6124276/94‑1 (MQ=60)
CCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATA > SRR4302545.4861618/1‑94 (MQ=60)
CCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATA > SRR4302545.6181099/1‑94 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT < SRR4302545.10414045/94‑1 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT < SRR4302545.5213777/94‑1 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT > SRR4302545.1938803/1‑94 (MQ=60)
GTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTT > SRR4302545.6055980/1‑94 (MQ=60)
GTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTT > SRR4302545.7674871/1‑94 (MQ=60)
TTTAATTTGCGGGGCGATCGCGTTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTC < SRR4302545.10867771/94‑1 (MQ=60)
TTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTC < SRR4302545.1348094/94‑1 (MQ=60)
AATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATT > SRR4302545.8785957/1‑94 (MQ=60)
AATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATT < SRR4302545.5164269/94‑1 (MQ=60)
TTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTAC > SRR4302545.8833673/1‑94 (MQ=60)
TTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTAC > SRR4302545.137647/1‑94 (MQ=60)
TTGCGGGGCGATGGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACG < SRR4302545.7836847/94‑1 (MQ=60)
TTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACG < SRR4302545.4709255/94‑1 (MQ=60)
TTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACG < SRR4302545.215001/94‑1 (MQ=60)
TTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACG > SRR4302545.8612860/1‑94 (MQ=60)
TGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGG < SRR4302545.7183025/94‑1 (MQ=60)
TGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGG > SRR4302545.7932011/1‑94 (MQ=60)
TGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGG > SRR4302545.7931681/1‑94 (MQ=60)
CGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGCGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTA > SRR4302545.2433078/1‑94 (MQ=60)
GGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA > SRR4302545.2595341/1‑94 (MQ=60)
GGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA > SRR4302545.1959515/1‑94 (MQ=60)
GGGGCGATCGCGCTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA < SRR4302545.9997727/94‑1 (MQ=60)
GGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT < SRR4302545.10403068/94‑1 (MQ=60)
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ACAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT > NC_000913/768354‑768539
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
