Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
882 |
254.4 |
12957588 |
98.0% |
12698436 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
768,447 |
A→G |
D416G (GAC→GGC) |
ybgG → |
putative sugar hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 768,447 | 0 | A | G | 99.6%
| 751.5
/ NA
| 221 | D416G (GAC→GGC) | ybgG | putative sugar hydrolase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (117/103); minor base C (0/1); total (117/104) |
| Fisher's exact test for biased strand distribution p-value = 4.71e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 228 total aligned reads displayed.
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTA > NC_000913/768357‑768536
|
aaCTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg < 1:1700589/93‑1 (MQ=255)
aaCTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCg > 1:2833770/1‑93 (MQ=255)
aCTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGa < 1:4692043/93‑1 (MQ=255)
aCTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGa < 1:5953475/93‑1 (MQ=255)
cTCGTCCTGTTTAACCTGATGCCCTGGTCGCTTGAAGAAGTTATCAACACCACTGTGCGGCTGCGAGCCAGCCCGTTTAATTTGTGGGGCGac > 1:3132715/1‑92 (MQ=255)
cTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAt > 2:5436304/1‑93 (MQ=255)
cTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAt < 2:5953809/93‑1 (MQ=255)
cTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAt > 2:5980790/1‑93 (MQ=255)
tCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATc > 2:5206293/1‑93 (MQ=255)
tCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATc > 1:5608290/1‑93 (MQ=255)
cGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcg < 2:2541085/93‑1 (MQ=255)
cGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcg < 1:762173/93‑1 (MQ=255)
gTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcgc < 1:1489643/93‑1 (MQ=255)
tCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATcgcg < 1:1008494/93‑1 (MQ=255)
ccTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCgg < 2:2968979/93‑1 (MQ=255)
ccTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCgg < 1:1869222/93‑1 (MQ=255)
cTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGt > 1:3582377/1‑93 (MQ=255)
tGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTc > 1:3346624/1‑93 (MQ=255)
gTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCa < 1:1063621/93‑1 (MQ=255)
gTTTAACCTGATGCCCTGGCCGCGTGAAGAACTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCa < 2:5012171/93‑1 (MQ=255)
tAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGcc > 2:4876562/1‑93 (MQ=255)
aaCCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCt < 2:3952625/93‑1 (MQ=255)
aCCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTg > 1:1626815/1‑93 (MQ=255)
tGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAc > 1:1368555/1‑93 (MQ=255)
tGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGt > 2:1252114/1‑93 (MQ=255)
gCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTa < 2:3801214/93‑1 (MQ=255)
cTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAttt > 2:3601919/1‑93 (MQ=255)
cTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAttt > 2:4644841/1‑93 (MQ=255)
tGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAtttt > 1:3305741/1‑93 (MQ=255)
ggCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTa > 1:788979/1‑93 (MQ=255)
gCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAt < 1:1291236/93‑1 (MQ=255)
ccGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAtt > 1:4930098/1‑93 (MQ=255)
cgcgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTc > 2:5856185/1‑93 (MQ=255)
cgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGc > 1:2666021/1‑93 (MQ=255)
cgTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGc < 2:4724646/93‑1 (MQ=255)
tGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCa < 1:4554549/93‑1 (MQ=255)
tGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCa > 1:5833615/1‑93 (MQ=255)
tGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCa > 2:6434764/1‑93 (MQ=255)
tGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCa > 2:5759156/1‑93 (MQ=255)
gaagaaGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAt > 2:3512645/1‑93 (MQ=255)
gaagaaGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAt > 1:245700/1‑93 (MQ=255)
aagaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATg > 2:2411288/1‑93 (MQ=255)
agaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGc > 2:1316178/1‑93 (MQ=255)
agaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGc > 1:923586/1‑93 (MQ=255)
gaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGcc < 2:664112/93‑1 (MQ=255)
gaagTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGcc > 2:1637802/1‑93 (MQ=255)
tATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTga > 2:5551784/1‑93 (MQ=255)
tCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTgaga < 1:4760709/93‑1 (MQ=255)
tCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTgaga > 1:3783801/1‑93 (MQ=255)
cAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgat < 1:740833/93‑1 (MQ=255)
aaCACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatc < 2:2238938/93‑1 (MQ=255)
acacCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcg > 1:2324512/1‑93 (MQ=255)
acacCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcg > 2:4196387/1‑93 (MQ=255)
caccacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcga < 1:6019722/93‑1 (MQ=255)
caccacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcga < 1:3907923/93‑1 (MQ=255)
accacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAgatcgat > 2:4968394/1‑93 (MQ=255)
cacTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATcc < 2:3491164/93‑1 (MQ=255)
ccTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCa < 2:5606930/92‑1 (MQ=255)
cTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAg > 2:782043/1‑93 (MQ=255)
cTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAg < 1:1245013/93‑1 (MQ=255)
cTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGACAGCCTCTACCGTATTTTATTCGCCATGCCCGTGAgatcgatcacg > 1:4819771/1‑90 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGTGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAgg < 2:6013616/93‑1 (MQ=255)
tgtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAgg > 2:3637735/1‑93 (MQ=255)
gtgCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGc > 2:5231762/1‑93 (MQ=255)
cGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTa < 2:4532447/93‑1 (MQ=255)
gCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAat > 2:1023533/1‑93 (MQ=255)
gCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAat > 2:5723276/1‑93 (MQ=255)
tGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcg > 1:5465426/1‑93 (MQ=255)
gcgcgcCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAatcga < 1:5114285/93‑1 (MQ=255)
gccagccaGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCgg > 2:2322136/1‑93 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc > 1:888691/1‑93 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc < 2:4035027/93‑1 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc > 1:2313631/1‑93 (MQ=255)
ccagccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGc > 1:3515357/1‑93 (MQ=255)
agccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaa > 2:3148908/1‑93 (MQ=255)
agccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaa > 1:5036529/1‑93 (MQ=255)
gccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaaa < 2:4086537/93‑1 (MQ=255)
gccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaaa < 1:6279554/93‑1 (MQ=255)
gccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaaa > 2:5531723/1‑93 (MQ=255)
gccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCaaa > 1:1837336/1‑93 (MQ=255)
ccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAAt < 1:2974936/93‑1 (MQ=255)
ccagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAAt > 2:1421822/1‑93 (MQ=255)
caagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAAt < 2:189372/91‑1 (MQ=255)
cagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTGCCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa < 1:6442675/93‑1 (MQ=255)
cagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa < 1:1161198/93‑1 (MQ=255)
cagTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATa > 2:1801275/1‑93 (MQ=255)
agTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAg < 2:356596/93‑1 (MQ=255)
gTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGt < 1:3170036/93‑1 (MQ=255)
gTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGt < 1:3098910/93‑1 (MQ=255)
gTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGt > 2:6181110/1‑93 (MQ=255)
tttAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGtt > 2:1159310/1‑93 (MQ=255)
aaTTTGCGGTACAATCGCGGTCAGCCTGTACCGTATTTTATTCCCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAt < 1:3990535/93‑1 (MQ=255)
aaTTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAt < 2:2757601/93‑1 (MQ=255)
aaTTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAt < 2:183913/93‑1 (MQ=255)
aTTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAtt < 1:34015/93‑1 (MQ=255)
tttGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTa < 2:2126139/93‑1 (MQ=255)
tGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACg > 1:5335634/1‑93 (MQ=255)
cGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGt < 2:5559741/93‑1 (MQ=255)
ggggCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTa > 1:2797110/1‑93 (MQ=255)
ggggCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTa > 2:2712336/1‑93 (MQ=255)
|
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTA > NC_000913/768357‑768536
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT > NC_000913/768355‑768539
|
CAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGC < SRR4302537.4666643/94‑1 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG > SRR4302537.2731702/1‑94 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG < SRR4302537.685370/94‑1 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG > SRR4302537.2853585/1‑94 (MQ=60)
AAACTCGTCCTGTTTAACCTGATGCCCGGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCG < SRR4302537.2491166/94‑1 (MQ=60)
AACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGA < SRR4302537.1712479/94‑1 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTCATTTGCGGGGCGAT > SRR4302537.2538333/1‑94 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAT < SRR4302537.5994347/94‑1 (MQ=60)
ACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGAT < SRR4302537.4724494/94‑1 (MQ=60)
CTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATC > SRR4302537.5646632/1‑94 (MQ=60)
CGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGC < SRR4302537.767379/94‑1 (MQ=60)
GTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCG < SRR4302537.3474953/94‑1 (MQ=60)
GTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCG > SRR4302537.757611/1‑94 (MQ=60)
GTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCG < SRR4302537.1500011/94‑1 (MQ=60)
TCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGG < SRR4302537.1015450/94‑1 (MQ=60)
CCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGT < SRR4302537.1882234/94‑1 (MQ=60)
CCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGT > SRR4302537.5481681/1‑94 (MQ=60)
CCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGT > SRR4302537.3607630/1‑94 (MQ=60)
CTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTC > SRR4302537.3370314/1‑94 (MQ=60)
GTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAG < SRR4302537.6343920/94‑1 (MQ=60)
GTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAG < SRR4302537.1070949/94‑1 (MQ=60)
AACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTG > SRR4302537.1638191/1‑94 (MQ=60)
CCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAACCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTA > SRR4302537.1186267/1‑94 (MQ=60)
CTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTAC > SRR4302537.1378091/1‑94 (MQ=60)
TGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACC < SRR4302537.1409874/94‑1 (MQ=60)
GATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCG > SRR4302537.5546419/1‑94 (MQ=60)
GCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTAT > SRR4302537.1288430/1‑94 (MQ=60)
CCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCAAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATT < SRR4302537.983095/94‑1 (MQ=60)
CCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTT > SRR4302537.5064493/1‑94 (MQ=60)
CTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTT > SRR4302537.3329112/1‑94 (MQ=60)
CTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTT > SRR4302537.2170959/1‑94 (MQ=60)
TGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTA > SRR4302537.794396/1‑94 (MQ=60)
GGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTAT < SRR4302537.3327787/94‑1 (MQ=60)
GCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATT > SRR4302537.4964082/1‑94 (MQ=60)
GCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATT < SRR4302537.3347703/94‑1 (MQ=60)
GCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATT < SRR4302537.1300214/94‑1 (MQ=60)
GCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGC > SRR4302537.2684645/1‑94 (MQ=60)
CGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCC > SRR4302537.2793438/1‑94 (MQ=60)
GTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCA > SRR4302537.1622587/1‑94 (MQ=60)
GTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCA > SRR4302537.5873596/1‑94 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT < SRR4302537.4586073/94‑1 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302537.5361568/1‑94 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302537.247442/1‑94 (MQ=60)
TGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCAT > SRR4302537.5892425/1‑94 (MQ=60)
AAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGC > SRR4302537.359297/1‑94 (MQ=60)
AAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGC > SRR4302537.929961/1‑94 (MQ=60)
AAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCG > SRR4302537.774084/1‑94 (MQ=60)
AGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGT > SRR4302537.2835372/1‑94 (MQ=60)
GTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTG < SRR4302537.3569121/94‑1 (MQ=60)
GTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTG > SRR4302537.6257848/1‑94 (MQ=60)
ATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGA > SRR4302537.3810366/1‑94 (MQ=60)
TCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGAT < SRR4302537.4793592/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC < SRR4302537.745893/94‑1 (MQ=60)
CAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATC < SRR4302537.3004291/94‑1 (MQ=60)
AACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCG > SRR4302537.2340919/1‑94 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGTGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT < SRR4302537.846077/94‑1 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT < SRR4302537.6061076/94‑1 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT < SRR4302537.3935242/94‑1 (MQ=60)
CACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGAT > SRR4302537.733293/1‑94 (MQ=60)
CCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCC > SRR4302537.3390329/1‑94 (MQ=60)
CACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCA > SRR4302537.4664193/1‑94 (MQ=60)
CACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCA < SRR4302537.2451029/94‑1 (MQ=60)
CCTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAG < SRR4302537.4795014/94‑1 (MQ=60)
ACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAG > SRR4302537.3103932/1‑94 (MQ=60)
ACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAG > SRR4302537.4853050/1‑94 (MQ=60)
ACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAG > SRR4302537.2882540/1‑94 (MQ=60)
ACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGACAGCCTCTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCacg > SRR4302537.4853049/1‑91 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302537.1253688/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302537.3867978/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGG < SRR4302537.3121657/94‑1 (MQ=60)
CTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGGACCGTATTTTATTCGCCATGCCCGTGAGATGGATGCAGG > SRR4302537.3303105/1‑94 (MQ=60)
GTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCC < SRR4302537.1690065/94‑1 (MQ=60)
TGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCT < SRR4302537.2013998/94‑1 (MQ=60)
TGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCT < SRR4302537.603590/94‑1 (MQ=60)
CGGCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAA > SRR4302537.2334610/1‑94 (MQ=60)
GGCTGCGCGCCAGCCAGTTGAATTTGCGGGGCGACCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAAT < SRR4302537.512735/94‑1 (MQ=60)
GCTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATC < SRR4302537.1644353/94‑1 (MQ=60)
CTGCGCGCCAGCCAGTTTAATTTGCGGGTCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCG < SRR4302537.2460907/94‑1 (MQ=60)
CTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCG < SRR4302537.1137233/94‑1 (MQ=60)
CTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCG > SRR4302537.5502704/1‑94 (MQ=60)
CTGCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCG > SRR4302537.132721/1‑94 (MQ=60)
GCGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGAT < SRR4302537.5149537/94‑1 (MQ=60)
CGCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATC < SRR4302537.1260235/94‑1 (MQ=60)
CCCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATC < SRR4302537.4909080/94‑1 (MQ=60)
GCGCCAGCGAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCG < SRR4302537.5346804/94‑1 (MQ=60)
GCGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCG < SRR4302537.1755180/94‑1 (MQ=60)
CGCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGG > SRR4302537.3974508/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302537.3540225/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302537.894805/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302537.900920/1‑94 (MQ=60)
GCCAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGC > SRR4302537.2329962/1‑94 (MQ=60)
CAGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAA > SRR4302537.5071201/1‑94 (MQ=60)
AGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAA > SRR4302537.1850128/1‑94 (MQ=60)
AGCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAA > SRR4302537.5650579/1‑94 (MQ=60)
GCCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAAT < SRR4302537.6322623/94‑1 (MQ=60)
CCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATA < SRR4302537.1034442/94‑1 (MQ=60)
CCAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATA < SRR4302537.2995767/94‑1 (MQ=60)
CAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTGCCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAG < SRR4302537.6486393/94‑1 (MQ=60)
CAGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAG < SRR4302537.1169275/94‑1 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT < SRR4302537.4725269/94‑1 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT > SRR4302537.4510688/1‑94 (MQ=60)
AGTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGT < SRR4302537.6478459/94‑1 (MQ=60)
GTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTT > SRR4302537.4443088/1‑94 (MQ=60)
GTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTT < SRR4302537.3192307/94‑1 (MQ=60)
GTTTAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTT < SRR4302537.3120538/94‑1 (MQ=60)
TAATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCAT > SRR4302537.3350130/1‑94 (MQ=60)
AATTTGCGGTACAATCGCGGTCAGCCTGTACCGTATTTTATTCCCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATT < SRR4302537.4018478/94‑1 (MQ=60)
AATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATT < SRR4302537.3174976/94‑1 (MQ=60)
ATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTA < SRR4302537.3640250/94‑1 (MQ=60)
ATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTA < SRR4302537.874267/94‑1 (MQ=60)
ATTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTA < SRR4302537.34284/94‑1 (MQ=60)
TTTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTAC < SRR4302537.1872175/94‑1 (MQ=60)
TTGCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACG > SRR4302537.5372220/1‑94 (MQ=60)
GCGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGT < SRR4302537.5907636/94‑1 (MQ=60)
CGGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTA > SRR4302537.2816669/1‑94 (MQ=60)
GGGGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAA > SRR4302537.2826380/1‑94 (MQ=60)
GGCGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT < SRR4302537.3794731/94‑1 (MQ=60)
|
CAAACTCGTCCTGTTTAACCTGATGCCCTGGCCGCGTGAAGAAGTTATCAACACCACTGTGCGGCTGCGCGCCAGCCAGTTTAATTTGCGGGACGATCGCGGTCAGCCTGTACCGTATTTTATTCGCCATGCCCGTGAGATCGATCCAGGCCTAATCGATCGGCAAATAGTTCATTACGGTAATT > NC_000913/768355‑768539
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
